View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11327_low_9 (Length: 327)
Name: NF11327_low_9
Description: NF11327
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11327_low_9 |
 | |
|
| [»] chr8 (14 HSPs) |
| |
|
| [»] chr4 (17 HSPs) |
| |
|
| [»] chr2 (26 HSPs) |
| |
|
| [»] scaffold0549 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 252; Significance: 1e-140; HSPs: 14)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 32 - 327
Target Start/End: Original strand, 41841117 - 41841412
Alignment:
| Q |
32 |
ccaatagcaagctactgaaatggtctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaaca |
131 |
Q |
| |
|
|||||||||||||| || ||| ||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
41841117 |
ccaatagcaagctattggggtggcttctccccatcaaaaaagtaatttaatatcgtgtgacccattggaccacatatcagatattaaactgataagaaca |
41841216 |
T |
|
| Q |
132 |
gatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaagatgggttggcttctgcttttatatctcacatccactcacttgctttctt |
231 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41841217 |
gatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaagatgggttggcttctgcttttatatctcacatccactcacttgctttctt |
41841316 |
T |
|
| Q |
232 |
aaacgagcgatgtgggactaaacttagacaacaacttgggactcaatggttcttgtacgcatggcatggccaacagagaccaaattccaagcaaag |
327 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41841317 |
aaacgagcgatgtgggactaaacttagacaacaacttgggactcaatggttcttgtacgcatggcatggccaacagagaccaaattccaagcaaag |
41841412 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 32 - 181
Target Start/End: Complemental strand, 40054454 - 40054305
Alignment:
| Q |
32 |
ccaatagcaagctactgaaatggtctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaaca |
131 |
Q |
| |
|
|||||||||||||| |||| ||| |||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||| |||||||||| |
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|
| T |
40054454 |
ccaatagcaagctattgaagtggcctctccccctcaaaaaagtaatttaatatcgtatgacccattgggccacatatcagatattaaactgataagaaca |
40054355 |
T |
|
| Q |
132 |
gatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaa |
181 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
40054354 |
gatactacacttgatcttagccaaaaggccgagaaaggtatgaattaaaa |
40054305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 57 - 252
Target Start/End: Complemental strand, 44879100 - 44878905
Alignment:
| Q |
57 |
tctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaacagatactacacttgatcttagccaaa |
156 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
44879100 |
tctccccctcaaaaaagtaatttaatatcatgtgacccattgagccacatatcagatattaaactgataagaacagatactacacttgatcttagccaaa |
44879001 |
T |
|
| Q |
157 |
aggccgagaaaggtatgagttaaaagatgggttggcttctgcttttatatctcacatccactcacttgctttcttaaacgagcgatgtgggactaa |
252 |
Q |
| |
|
||||||||||||||||||||| || | |||| | || |||||||||||||| | | ||||||| || || |||| ||| | |||||||||||||| |
|
|
| T |
44879000 |
aggccgagaaaggtatgagttgaatgttgggctcgcctctgcttttatatccctcgtccactctctatctctcttgaacaaacgatgtgggactaa |
44878905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 57 - 252
Target Start/End: Original strand, 44880821 - 44881016
Alignment:
| Q |
57 |
tctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaacagatactacacttgatcttagccaaa |
156 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
44880821 |
tctccccctcaaaaaagtaatttaatatcatgtgacccattgagccacatatcagatattaaactgataagaacagatactacacttgatcttagccaaa |
44880920 |
T |
|
| Q |
157 |
aggccgagaaaggtatgagttaaaagatgggttggcttctgcttttatatctcacatccactcacttgctttcttaaacgagcgatgtgggactaa |
252 |
Q |
| |
|
||||||||||||||||||||| || | |||| | || |||||||||||||| | | ||||||| || || |||| ||| | |||||||||||||| |
|
|
| T |
44880921 |
aggccgagaaaggtatgagttgaatgttgggctcgcctctgcttttatatccctcgtccactctctatctctcttgaacaaacgatgtgggactaa |
44881016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 36 - 178
Target Start/End: Original strand, 10944368 - 10944510
Alignment:
| Q |
36 |
tagcaagctactgaaatggtctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaacagata |
135 |
Q |
| |
|
|||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
10944368 |
tagcaagctactaaaatggcttctccccatcaaaaaagtaatttaatatcgtgtgaaccatttgtccacatataagatattaaactgataagaacagata |
10944467 |
T |
|
| Q |
136 |
ctacacttgatcttagccaaaaggccgagaaaggtatgagtta |
178 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
10944468 |
ctacacttgatcttagccaaaaggtcgagaaaggtatgagtta |
10944510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 38 - 251
Target Start/End: Original strand, 42555053 - 42555267
Alignment:
| Q |
38 |
gcaagctactgaaatggtctctccccctcaaaaaag-taatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaacagatac |
136 |
Q |
| |
|
|||||||||||| |||| ||| ||| |||||||| |||||||||||||||||| ||||| |||||||||| ||||||||| ||||| ||||||| | |
|
|
| T |
42555053 |
gcaagctactgagatggcttcttcccttcaaaaaacataatttaatatcgtgtgattcattgaaccacatatcaaatattaaactgataaaaacagattc |
42555152 |
T |
|
| Q |
137 |
tacacttgatcttagccaaaaggccgagaaaggtatgagttaaaagatgggttggcttctgcttttatatctcacatccactcacttgctttcttaaacg |
236 |
Q |
| |
|
| |||||||||||||||||||| | ||||||||||||||| |||| || | | |||| | |||||||| |||||||||||||||||||||||||||| |
|
|
| T |
42555153 |
tgcacttgatcttagccaaaagatcaagaaaggtatgagttgaaagttgagctaccttcaggttttatatatcacatccactcacttgctttcttaaact |
42555252 |
T |
|
| Q |
237 |
agcgatgtgggacta |
251 |
Q |
| |
|
| ||||||||||||| |
|
|
| T |
42555253 |
atcgatgtgggacta |
42555267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 32 - 172
Target Start/End: Complemental strand, 37679897 - 37679757
Alignment:
| Q |
32 |
ccaatagcaagctactgaaatggtctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaaca |
131 |
Q |
| |
|
||||||||||||||| | ||| ||||||||||||| ||| ||||||||||| ||| |||||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
37679897 |
ccaatagcaagctaccgtggtggcctctccccctcaataaataaatttaatatcaagtggaccattggcccacatatcagatattaaactgataagaaca |
37679798 |
T |
|
| Q |
132 |
gatactacacttgatcttagccaaaaggccgagaaaggtat |
172 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37679797 |
gatactacacttgatcttagccaaaaggccgagaaaggtat |
37679757 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 75 - 174
Target Start/End: Complemental strand, 37682156 - 37682057
Alignment:
| Q |
75 |
aatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatga |
174 |
Q |
| |
|
|||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
37682156 |
aatttaatatcgtgtggaccattggcccacatatcagatattaaactgataagaacagatactacacttgatcttagccaaaaggccgagaaatgtatga |
37682057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 101 - 250
Target Start/End: Complemental strand, 42092093 - 42091945
Alignment:
| Q |
101 |
ccacatatcagatattaaaccgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaagatgggttggcttctgctt |
200 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||| ||||||| || ||||| ||||||| ||||||||||||||| ||||||| ||| ||||||| || |
|
|
| T |
42092093 |
ccacatatcagatattaaactgataagaacaaatattacacttaattttagc-aaaaggcaaagaaaggtatgagtttaaagatgagtttgcttctggtt |
42091995 |
T |
|
| Q |
201 |
ttatatctcacatccactcacttgctttcttaaacgagcgatgtgggact |
250 |
Q |
| |
|
|||||||||| |||||||| |||||||||| ||| | |||||||||||| |
|
|
| T |
42091994 |
ttatatctcaggtccactcagttgctttcttgaactaccgatgtgggact |
42091945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 101 - 251
Target Start/End: Original strand, 42220880 - 42221028
Alignment:
| Q |
101 |
ccacatatcagatattaaaccgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaagatgggttggcttctgctt |
200 |
Q |
| |
|
|||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||| ||| ||||||||| |||| | | | || ||||||| |
|
|
| T |
42220880 |
ccacatatcagatattaaactaataagaa-agatactacacttgatcttagccaaaagaccgaaaaatgtatgagttgaaagctatgctcgcctctgctt |
42220978 |
T |
|
| Q |
201 |
ttatatctcacatccactcacttgctttcttaaacgagcgatgtgggacta |
251 |
Q |
| |
|
|||||||||| |||||| ||||| |||||| ||| ||||||||||||||| |
|
|
| T |
42220979 |
ttatatctcatatccac-cacttactttctagaactagcgatgtgggacta |
42221028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 57 - 251
Target Start/End: Complemental strand, 44582970 - 44582768
Alignment:
| Q |
57 |
tctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaacagatactacacttgatcttagcc--- |
153 |
Q |
| |
|
|||| |||||||||||||||||||||||| | | |||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
44582970 |
tctctccctcaaaaaagtaatttaatatcatagaatccattgagctacatatcagatattaaactgataagaacagatactacacttgatcttagccaaa |
44582871 |
T |
|
| Q |
154 |
-----aaaaggccgagaaaggtatgagttaaaagatgggttggcttctgcttttatatctcacatccactcacttgctttcttaaacgagcgatgtggga |
248 |
Q |
| |
|
|||| ||||||||| |||||| || ||||| || | || || ||||||||||| ||||| || |||||| || |||||||| | |||||||||| |
|
|
| T |
44582870 |
aaccaaaaaagccgagaaatgtatgaattgaaagagagggtcgcctcggcttttatatcacacattcattcactttctctcttaaacaaacgatgtggga |
44582771 |
T |
|
| Q |
249 |
cta |
251 |
Q |
| |
|
||| |
|
|
| T |
44582770 |
cta |
44582768 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 177
Target Start/End: Original strand, 42872514 - 42872560
Alignment:
| Q |
131 |
agatactacacttgatcttagccaaaaggccgagaaaggtatgagtt |
177 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
42872514 |
agatactacacttaatcttagccaaaaggccgagaaaggtatgagtt |
42872560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 114
Target Start/End: Original strand, 42554632 - 42554709
Alignment:
| Q |
37 |
agcaagctactgaaatggtctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagata |
114 |
Q |
| |
|
||||| ||||||| |||| |||||||||||||||| |||||||||||||||| | ||||| |||||||||||||| |
|
|
| T |
42554632 |
agcaaactactgagatggcttctccccctcaaaaaaataatttaatatcgtgtaattcattgacccacatatcagata |
42554709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 44583162 - 44583111
Alignment:
| Q |
68 |
aaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaac |
120 |
Q |
| |
|
||||||||||||||||||||||| |||||| || ||||||||||||||||||| |
|
|
| T |
44583162 |
aaaaagtaatttaatatcgtgtgtaccatt-gttcacatatcagatattaaac |
44583111 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 244; Significance: 1e-135; HSPs: 17)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 32 - 327
Target Start/End: Original strand, 11652357 - 11652652
Alignment:
| Q |
32 |
ccaatagcaagctactgaaatggtctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaaca |
131 |
Q |
| |
|
|||||||||||||| || | ||| |||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
11652357 |
ccaatagcaagctattggagtggcttctccccctcaaaaaaataatttaatatcgtgtgacccattgggccacatatcagatattaaactgataagaaca |
11652456 |
T |
|
| Q |
132 |
gatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaagatgggttggcttctgcttttatatctcacatccactcacttgctttctt |
231 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
11652457 |
gatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaagatgggttggcttctggttttatatctcacatccactcacttgctttctt |
11652556 |
T |
|
| Q |
232 |
aaacgagcgatgtgggactaaacttagacaacaacttgggactcaatggttcttgtacgcatggcatggccaacagagaccaaattccaagcaaag |
327 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |
|
|
| T |
11652557 |
aaacgagcgatgtgggactaaacttagacaacaacttgtgactcaatggttcttgtacgcatggcatagccaacagagaccaatttccaagcaaag |
11652652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 32 - 327
Target Start/End: Original strand, 3461107 - 3461400
Alignment:
| Q |
32 |
ccaatagcaagctactgaaatggtctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaaca |
131 |
Q |
| |
|
|||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
3461107 |
ccaatagcaagctattgaaatggcttctcccccttaaaaaagtaatttaatatcgtgtgacccattgagtcacatatcagatattaaactgataagaaca |
3461206 |
T |
|
| Q |
132 |
gatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaagatgggttggcttctgcttttatatctcacatccactcacttgctttctt |
231 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| || ||||| | | |||| || ||||||||||| ||||||||||||||||||||| |
|
|
| T |
3461207 |
gatactacacttgatcttagccaaaaggccgagaaaggtatgaattgaaagagatgctcgcttatggttttatatctcccatccactcacttgctttctt |
3461306 |
T |
|
| Q |
232 |
aaacgagcgatgtgggactaaacttagacaacaacttgggactcaatggttcttgtacgcatggcatggccaacagagaccaaattccaagcaaag |
327 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||| ||||||||||||||| || ||||||||| |
|
|
| T |
3461307 |
ccacaagcgatgtgggactaaacttagacaacaacttgggactc--tagttcttgcacgcatggcatagccaacagagaccaactttcaagcaaag |
3461400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 32 - 207
Target Start/End: Original strand, 50077164 - 50077339
Alignment:
| Q |
32 |
ccaatagcaagctactgaaatggtctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaaca |
131 |
Q |
| |
|
|||||||||||||| |||| ||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
50077164 |
ccaatagcaagctattgaagtggcttctccccctcaaaaaagtaatttaatatcatgtgaaccattggaacacatatcagatattaaactgataagaaca |
50077263 |
T |
|
| Q |
132 |
gatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaagatgggttggcttctgcttttatatc |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||| | | ||||||||||||||||||| |
|
|
| T |
50077264 |
gatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaagaagagctggcttctgcttttatatc |
50077339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 57 - 207
Target Start/End: Original strand, 49106519 - 49106669
Alignment:
| Q |
57 |
tctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaacagatactacacttgatcttagccaaa |
156 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
49106519 |
tctccccctcaaaaaagtaatttaatatcgtgtgatccattggaccacatatcagatattaaactgataagaacagatactacacttgatcttagccaaa |
49106618 |
T |
|
| Q |
157 |
aggccgagaaaggtatgagttaaaagatgggttggcttctgcttttatatc |
207 |
Q |
| |
|
||||||||||||||||||||| |||| || ||||||||||||||||||| |
|
|
| T |
49106619 |
aggccgagaaaggtatgagttgaaagggtggctggcttctgcttttatatc |
49106669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 32 - 207
Target Start/End: Original strand, 49108598 - 49108773
Alignment:
| Q |
32 |
ccaatagcaagctactgaaatggtctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaaca |
131 |
Q |
| |
|
||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
49108598 |
ccaatagcaagctactgtgatgacttctccccctcaaaaaagtaatttaatatcgtgtgacccattgagtcacatatcagatattaaactgataagaaca |
49108697 |
T |
|
| Q |
132 |
gatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaagatgggttggcttctgcttttatatc |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||| || || ||||||||| ||||||||| |
|
|
| T |
49108698 |
gatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaatataggctggcttctgattttatatc |
49108773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 56 - 173
Target Start/End: Original strand, 26998729 - 26998846
Alignment:
| Q |
56 |
ctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaacagatactacacttgatcttagccaa |
155 |
Q |
| |
|
||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
26998729 |
ctctctccctaaaaaaagtaatttaatatcgtgtggaccattggtccacatatcagatattaaactgataagaacagatactacacttgatcttagccaa |
26998828 |
T |
|
| Q |
156 |
aaggccgagaaaggtatg |
173 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
26998829 |
aaggccgagaaaggtatg |
26998846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 68 - 173
Target Start/End: Original strand, 26984668 - 26984773
Alignment:
| Q |
68 |
aaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaacagatactacacttgatcttagccaaaaggccgagaaa |
167 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26984668 |
aaaaagtaatttaatatcgtgtggaccattggtccacatatcagatattaaactgataagaacagatactacacttgatcttagccaaaaggccgagaaa |
26984767 |
T |
|
| Q |
168 |
ggtatg |
173 |
Q |
| |
|
|||||| |
|
|
| T |
26984768 |
ggtatg |
26984773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 62 - 173
Target Start/End: Complemental strand, 48205943 - 48205832
Alignment:
| Q |
62 |
ccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaacagatactacacttgatcttagccaaaaggcc |
161 |
Q |
| |
|
|||||||||||||||||||||||| ||| ||||| |||||||||||| |||||||||| ||||||||||||||||||||| |||||||| |||||||| |
|
|
| T |
48205943 |
ccctcaaaaaagtaatttaatatcatgtaaaccaatggtccacatataagatattaaattaataagaacagatactacacttaatcttagctaaaaggcc |
48205844 |
T |
|
| Q |
162 |
gagaaaggtatg |
173 |
Q |
| |
|
|||||||||||| |
|
|
| T |
48205843 |
gagaaaggtatg |
48205832 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 57 - 146
Target Start/End: Complemental strand, 21503795 - 21503706
Alignment:
| Q |
57 |
tctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaacagatactacacttgat |
146 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||| | |||| |||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
21503795 |
tctccccctcaaaaaaataatttaatatcgtgtgacctattgagccacatatcagatattaaactgataagaacagatactacacttgat |
21503706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 69 - 172
Target Start/End: Original strand, 41013548 - 41013651
Alignment:
| Q |
69 |
aaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaacagatactacacttgatcttagccaaaaggccgagaaag |
168 |
Q |
| |
|
|||| |||||||||| | |||||||| ||||||||||||||||||||||||| |||||||||| ||| || |||| |||||| |||||||||||||||| |
|
|
| T |
41013548 |
aaaaataatttaataccatgtgaacccttggtccacatatcagatattaaacggataagaacatatattatacttaatcttaaccaaaaggccgagaaaa |
41013647 |
T |
|
| Q |
169 |
gtat |
172 |
Q |
| |
|
|||| |
|
|
| T |
41013648 |
gtat |
41013651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 167
Target Start/End: Complemental strand, 26982646 - 26982549
Alignment:
| Q |
67 |
aaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaacagatactacacttgatcttagccaaaaggccgagaa |
166 |
Q |
| |
|
|||||| | |||||||||| ||| || ||||| ||||||||| ||||| ||||| ||| ||||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
26982646 |
aaaaaaatgatttaatatcatgtaaatcattgatccacatattagatactaaac---taataacagatgctacacttgatcttagccaagaggccgagaa |
26982550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 207
Target Start/End: Original strand, 49533638 - 49533764
Alignment:
| Q |
74 |
taatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatg |
173 |
Q |
| |
|
|||||||||||||||||| | |||| |||||||||||||||| |||||||||||| | ||||||||||||||||| |||||||||||||||| |
|
|
| T |
49533638 |
taatttaatatcgtgtgacctattgagtaacatatcagatattaa-----taagaacagata-tgcacttgatcttagccaag-ggccgagaaaggtatg |
49533730 |
T |
|
| Q |
174 |
agttaaaagatgggttggcttctgcttttatatc |
207 |
Q |
| |
|
||| || | ||| ||||||||| ||||||||| |
|
|
| T |
49533731 |
ggttggaataagggctggcttctggttttatatc |
49533764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 65 - 138
Target Start/End: Complemental strand, 35806238 - 35806165
Alignment:
| Q |
65 |
tcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaacagatacta |
138 |
Q |
| |
|
|||||||||||||||||||||||| || |||| | |||||||| ||||||||| |||||||||| |||||| |
|
|
| T |
35806238 |
tcaaaaaagtaatttaatatcgtgcgactcattagattacatatcatatattaaactgataagaacaaatacta |
35806165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 110
Target Start/End: Complemental strand, 54677633 - 54677590
Alignment:
| Q |
67 |
aaaaaagtaatttaatatcgtgtgaaccattggtccacatatca |
110 |
Q |
| |
|
||||||||||||||||||||||||| ||||| | |||||||||| |
|
|
| T |
54677633 |
aaaaaagtaatttaatatcgtgtgatccattagaccacatatca |
54677590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 117
Target Start/End: Original strand, 34481105 - 34481155
Alignment:
| Q |
67 |
aaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatatta |
117 |
Q |
| |
|
||||||||||||||||||| |||| | ||||| | |||||||||||||||| |
|
|
| T |
34481105 |
aaaaaagtaatttaatatcttgtggatcattgattcacatatcagatatta |
34481155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 167
Target Start/End: Original strand, 6431957 - 6432010
Alignment:
| Q |
114 |
attaaaccgataagaacagatactacacttgatcttagccaaaaggccgagaaa |
167 |
Q |
| |
|
||||||| ||||||| |||||||| || ||||||||||||| ||||||||||| |
|
|
| T |
6431957 |
attaaactaataagaagagatactaaacctgatcttagccaataggccgagaaa |
6432010 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 34481155 - 34481191
Alignment:
| Q |
133 |
atactacacttgatcttagccaaaaggccgagaaagg |
169 |
Q |
| |
|
|||||||||| ||||||||||||||||| |||||||| |
|
|
| T |
34481155 |
atactacactcgatcttagccaaaaggctgagaaagg |
34481191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 177; Significance: 2e-95; HSPs: 26)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 58 - 327
Target Start/End: Original strand, 2841008 - 2841278
Alignment:
| Q |
58 |
ctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaacagatactacacttgatcttagccaaaa |
157 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
2841008 |
ctccccctcaaaaaagtaatttaatatcgtgtgatccattgaaccacatatcagatattaaactgataagaacagatactacacttgatcttagccaaaa |
2841107 |
T |
|
| Q |
158 |
ggccgagaaaggtat--gagttaaaagatgggttggcttctgcttttatatctcacatccactcacttgctttcttaaacgagcgatgtgggactaaact |
255 |
Q |
| |
|
||||||||||||||| ||||||||| | ||| | || |||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||| |
|
|
| T |
2841108 |
ggccgagaaaggtatgagagttaaaa-aggggctcgcgtctgcttttatatctcacatccactcacttgctttcttcaacaaccgatgtgggactaaact |
2841206 |
T |
|
| Q |
256 |
tagacaacaacttgggactcaatggttcttgtacgcatggcatggccaacagagaccaaattccaagcaaag |
327 |
Q |
| |
|
|| |||| |||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||| |
|
|
| T |
2841207 |
taaacaataacttgggactcgcctgttcttgtacgcatggcatggccaacaaagaccaatttccaagcaaag |
2841278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 32 - 250
Target Start/End: Complemental strand, 9026929 - 9026710
Alignment:
| Q |
32 |
ccaatagcaagctactgaaatggtctctccccctcaaaaaagtaatttaatatcgt-gtgaaccattggtccacatatcagatattaaaccgataagaac |
130 |
Q |
| |
|
|||||||||||||| |||||||||||||||| |||||||||||||||||||| || |||| ||||||| |||| |||||||||||||| ||||||||| |
|
|
| T |
9026929 |
ccaatagcaagctattgaaatggtctctcccactcaaaaaagtaatttaatactgttgtgacccattgggccactaatcagatattaaactgataagaac |
9026830 |
T |
|
| Q |
131 |
agatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaagatgggttggcttctgcttttatatctcacatccactcacttgctttct |
230 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||| ||||||||||| ||||||| ||||||||||||| |
|
|
| T |
9026829 |
agatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaagatgaattcgcttatgcttttatataccacatcccttcacttgctttct |
9026730 |
T |
|
| Q |
231 |
taaacgagcgatgtgggact |
250 |
Q |
| |
|
| ||| | |||| ||||||| |
|
|
| T |
9026729 |
tgaacaaccgatatgggact |
9026710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 36 - 207
Target Start/End: Complemental strand, 30732146 - 30731975
Alignment:
| Q |
36 |
tagcaagctactgaaatggtctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaacagata |
135 |
Q |
| |
|
||||||||||| || ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
30732146 |
tagcaagctaccaaagtggcctccccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatattagatattaaactgataagaacagata |
30732047 |
T |
|
| Q |
136 |
ctacacttgatcttagccaaaaggccgagaaaggtatgagttaaaagatgggttggcttctgcttttatatc |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||| | | | ||||||||||||| |
|
|
| T |
30732046 |
ctacacttgatcttagccaaaaggccgagaaaggtatgagttgaaagatgggctcgttgctgcttttatatc |
30731975 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 36 - 177
Target Start/End: Complemental strand, 32918218 - 32918077
Alignment:
| Q |
36 |
tagcaagctactgaaatggtctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaacagata |
135 |
Q |
| |
|
||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
32918218 |
tagcaagctactgcaatggcttctccccctcaaaaaagtaatttaatatcgtgtggaccattggtccacatatcagatattaaactgataagaacagata |
32918119 |
T |
|
| Q |
136 |
ctacacttgatcttagccaaaaggccgagaaaggtatgagtt |
177 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32918118 |
ctacacttgatcttagccaaaaggccgagaaaggtatgagtt |
32918077 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 36 - 231
Target Start/End: Complemental strand, 30734126 - 30733932
Alignment:
| Q |
36 |
tagcaagctactgaaatggtctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaacagata |
135 |
Q |
| |
|
|||||||||||| |||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
30734126 |
tagcaagctactaaaatggcttctccccctaaaaaaagtaatttaatatcatgtgaaccattggtccacatatcagatattaaactgataagaacagata |
30734027 |
T |
|
| Q |
136 |
ctacacttgatcttagccaaaaggccgagaaaggtatgagttaaaagatgggttggcttctgcttttatatctcacatccactcacttgctttctt |
231 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||| || ||| | | || |||||||||||||| |||| |||||||| |||||| |
|
|
| T |
30734026 |
ctacacttgatcttagccaaaaggccgagaaaggtataagttacaacatgagat-cctgctgcttttatatctgacatgttctcacttgttttctt |
30733932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 32 - 230
Target Start/End: Complemental strand, 8973455 - 8973256
Alignment:
| Q |
32 |
ccaatagcaagctactgaaatggtctctccccctcaaaaaagtaatttaatatcgt-gtgaaccattggtccacatatcagatattaaaccgataagaac |
130 |
Q |
| |
|
|||| ||||||||| ||||||||||||||||||| |||||||||||||||||| || |||| ||||||| |||| |||||||||||||| |||||||| |
|
|
| T |
8973455 |
ccaacagcaagctattgaaatggtctctcccccttaaaaaagtaatttaatattgttgtgacccattgggccactaatcagatattaaactaataagaac |
8973356 |
T |
|
| Q |
131 |
agatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaagatgggttggcttctgcttttatatctcacatccactcacttgctttct |
230 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||| ||||||||||| |||||||| |||||| |||||| |
|
|
| T |
8973355 |
agatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaagatgaactcgcttatgcttttatatatcacatcccttcacttactttct |
8973256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 32 - 207
Target Start/End: Complemental strand, 43850191 - 43850016
Alignment:
| Q |
32 |
ccaatagcaagctactgaaatggtctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaaca |
131 |
Q |
| |
|
|||||||||||||| |||| || ||||||||||||||||||| |||||||||| ||||| |||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
43850191 |
ccaatagcaagctattgaagtgacctctccccctcaaaaaagtgatttaatatcatgtgactcattgggccacatatcagatattaaactgataagaaca |
43850092 |
T |
|
| Q |
132 |
gatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaagatgggttggcttctgcttttatatc |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||| | || | || |||||||||||||| |
|
|
| T |
43850091 |
gatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaataaggctacgcatctgcttttatatc |
43850016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 32 - 250
Target Start/End: Complemental strand, 9020990 - 9020771
Alignment:
| Q |
32 |
ccaatagcaagctactgaaatggtctctccccctcaaaaaagtaatttaatatcgt-gtgaaccattggtccacatatcagatattaaaccgataagaac |
130 |
Q |
| |
|
||||||||||| || |||||||| ||||| |||||||||||||||||||||| || |||| ||||||| |||||| |||||||||||| ||||||||| |
|
|
| T |
9020990 |
ccaatagcaagttattgaaatggcctctcaccctcaaaaaagtaatttaatactgtagtgacccattgggccacatctcagatattaaattgataagaac |
9020891 |
T |
|
| Q |
131 |
agatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaagatgggttggcttctgcttttatatctcacatccactcacttgctttct |
230 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||| || ||||||| | |||| || |||||||| ||||||||| |||||||||||| |
|
|
| T |
9020890 |
agatactacacttgatcttagccaaaaggccgagaaatgtatgaattgaaagatgaactcgcttatggttttatatatcacatccattcacttgctttca |
9020791 |
T |
|
| Q |
231 |
taaacgagcgatgtgggact |
250 |
Q |
| |
|
| ||| | |||||| ||||| |
|
|
| T |
9020790 |
tgaacaaccgatgtaggact |
9020771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 32 - 249
Target Start/End: Complemental strand, 9016639 - 9016418
Alignment:
| Q |
32 |
ccaatagcaagctactgaaatggtctctccccctcaaaaaagtaatttaatatcgt-gtgaaccattggtccacatatcagatattaaacc---gataag |
127 |
Q |
| |
|
|||||||||||||| |||||| |||||||||||||||||||||||||||||| || |||| ||||||| |||| |||||||||||||| |||||| |
|
|
| T |
9016639 |
ccaatagcaagctattgaaattgtctctccccctcaaaaaagtaatttaatactgttgtgacccattgggccactaatcagatattaaactactgataag |
9016540 |
T |
|
| Q |
128 |
aacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaagatgggttggcttctgcttttatatctcacatccactcacttgctt |
227 |
Q |
| |
|
||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||| | |||| ||||||||||| |||||||| |||||||||| |
|
|
| T |
9016539 |
aacagatactacatttgatcttagccaaaaggtcgaataaggtatgagttaaaagatgaactcgcttatgcttttatatatcacatcctttcacttgctt |
9016440 |
T |
|
| Q |
228 |
tcttaaacgagcgatgtgggac |
249 |
Q |
| |
|
|||| ||| | |||||||||| |
|
|
| T |
9016439 |
tcttgaacaactgatgtgggac |
9016418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 32 - 177
Target Start/End: Complemental strand, 9008164 - 9008018
Alignment:
| Q |
32 |
ccaatagcaagctactgaaatggtctctccccctcaaaaaagtaatttaatatcgtg-tgaaccattggtccacatatcagatattaaaccgataagaac |
130 |
Q |
| |
|
|||||| |||| || |||||||| |||||||||||||||||||||||||||| || ||| ||||||| |||| |||||||||||||| ||||||||| |
|
|
| T |
9008164 |
ccaataacaagttattgaaatggcctctccccctcaaaaaagtaatttaatactgttatgacccattgggccactaatcagatattaaactgataagaac |
9008065 |
T |
|
| Q |
131 |
agatactacacttgatcttagccaaaaggccgagaaaggtatgagtt |
177 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9008064 |
agatactacacttgatcttagccaaaaggccgagaaaggtatgagtt |
9008018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 56 - 250
Target Start/End: Complemental strand, 9030516 - 9030322
Alignment:
| Q |
56 |
ctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaacagatactacacttgatcttagccaa |
155 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||| |||||| |||| | ||| |||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
9030516 |
ctctccccctcaaaaaagtaatttaatactgtgtgacccattgagccacttctcaaatattaaattgataagaacagatactacacttgatcttagccaa |
9030417 |
T |
|
| Q |
156 |
aaggccgagaaaggtatgagttaaaagatgggttggcttctgcttttatatctcacatccactcacttgctttcttaaacgagcgatgtgggact |
250 |
Q |
| |
|
|||||| ||||| |||||||| ||||||| | |||| ||||||||||| |||||||| |||||||| ||||| ||| |||||||||||| |
|
|
| T |
9030416 |
aaggccaagaaaaatatgagttgaaagatgaacttgcttatgcttttatatatcacatcccttcacttgcattcttgaacagtcgatgtgggact |
9030322 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 101 - 231
Target Start/End: Complemental strand, 9032126 - 9031996
Alignment:
| Q |
101 |
ccacatatcagatattaaaccgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaagatgggttggcttctgctt |
200 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| || |||| ||||| |
|
|
| T |
9032126 |
ccacatatcagatattaaactgataagaacagatactacacttgatcttaaccaaaaggccgagaaaggtatgagttgaaagatgaattcgcttatgctt |
9032027 |
T |
|
| Q |
201 |
ttatatctcacatccactcacttgctttctt |
231 |
Q |
| |
|
|||||| ||||||| |||||||||||||| |
|
|
| T |
9032026 |
ttatataccacatcccttcacttgctttctt |
9031996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 32 - 172
Target Start/End: Original strand, 19232365 - 19232504
Alignment:
| Q |
32 |
ccaatagcaagctactgaaatggtctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaaca |
131 |
Q |
| |
|
|||||||||||||| |||| ||| ||||||||||||||| |||||||||||| |||||| ||| ||| |||||||||| |||||||| |||||||||| |
|
|
| T |
19232365 |
ccaatagcaagctattgaagtggcttctccccctcaaaaaggtaatttaatattgtgtgacccaatgggtcacatatcag-tattaaactgataagaaca |
19232463 |
T |
|
| Q |
132 |
gatactacacttgatcttagccaaaaggccgagaaaggtat |
172 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
19232464 |
gatattacacttgatcttagccaaaaggccgagaaaggtat |
19232504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 93 - 250
Target Start/End: Complemental strand, 9023528 - 9023371
Alignment:
| Q |
93 |
ccattggtccacatatcagatattaaaccgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaagatgggttggc |
192 |
Q |
| |
|
||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| | || |
|
|
| T |
9023528 |
ccattgggccactaatcagatattaaactaataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaagttggactcgc |
9023429 |
T |
|
| Q |
193 |
ttctgcttttatatctcacatccactcacttgctttcttaaacgagcgatgtgggact |
250 |
Q |
| |
|
|| ||||||||||| ||||||| ||||||| |||||| ||| | |||||||||||| |
|
|
| T |
9023428 |
ttatgcttttatatatcacatctcttcacttgatttcttgaacaaccgatgtgggact |
9023371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 38 - 250
Target Start/End: Complemental strand, 8984830 - 8984617
Alignment:
| Q |
38 |
gcaagctactgaaatggtctctccccctcaaaaaagtaatttaatatcgt-gtgaaccattggtccacatatcagatattaaaccgataagaacagatac |
136 |
Q |
| |
|
|||||||| |||||||| ||| || |||||||||| ||||||| | | | |||| ||||| | |||| |||| ||||||||| ||||||||| |||| |
|
|
| T |
8984830 |
gcaagctattgaaatggcatctacctctcaaaaaagcaatttaaaaccattgtgacccattaggccactaatcaaatattaaactaataagaacaaatac |
8984731 |
T |
|
| Q |
137 |
tacacttgatcttagccaaaaggccgagaaaggtatgagttaaaagatgggttggcttctgcttttatatctcacatccactcacttgctttcttaaacg |
236 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||| ||| | |||| ||||||||||| |||||||| ||||||| |||||| ||| |
|
|
| T |
8984730 |
tacacttgatcttagccaaaaggccgagaaaggtatgagttgaaatatgaacttgcttatgcttttatatatcacatcccttcacttgttttcttgaaca |
8984631 |
T |
|
| Q |
237 |
agcgatgtgggact |
250 |
Q |
| |
|
| |||||||||||| |
|
|
| T |
8984630 |
accgatgtgggact |
8984617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 56 - 251
Target Start/End: Complemental strand, 8988574 - 8988378
Alignment:
| Q |
56 |
ctctccccctcaaaaaagtaatttaatatcgt-gtgaaccattggtccacatatcagatattaaaccgataagaacagatactacacttgatcttagcca |
154 |
Q |
| |
|
||||| ||||||||||||||||||||||| || | ||||||||| ||| |||| ||||||||| |||||||||| ||||||||||||||||| |||| |
|
|
| T |
8988574 |
ctctcaccctcaaaaaagtaatttaatattgttgagaaccattgagtcactgatcaaatattaaactgataagaacaaatactacacttgatcttcgcca |
8988475 |
T |
|
| Q |
155 |
aaaggccgagaaaggtatgagttaaaagatgggttggcttctgcttttatatctcacatccactcacttgctttcttaaacgagcgatgtgggacta |
251 |
Q |
| |
|
||||||| |||| ||||| |||| ||||||| | |||| ||||||||||| |||||||| |||||||||||||| ||| ||||||||||||| |
|
|
| T |
8988474 |
aaaggccaagaatggtataagttgaaagatgaactcgcttatgcttttatatatcacatcccttcacttgctttcttgaacagtcgatgtgggacta |
8988378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 61 - 231
Target Start/End: Complemental strand, 8992262 - 8992091
Alignment:
| Q |
61 |
cccctcaaaaaagtaatttaatatcgt-gtgaaccattggtccacatatcagatattaaaccgataagaacagatactacacttgatcttagccaaaagg |
159 |
Q |
| |
|
|||||||||||||||||||||||| | |||| ||||||| |||| |||||||||| ||| ||||||||| |||||||||||||||||||||||||| |
|
|
| T |
8992262 |
cccctcaaaaaagtaatttaatattattgtgacccattgggccactaatcagatattgaactcataagaacatatactacacttgatcttagccaaaaga |
8992163 |
T |
|
| Q |
160 |
ccgagaaaggtatgagttaaaagatgggttggcttctgcttttatatctcacatccactcacttgctttctt |
231 |
Q |
| |
|
| |||||||| ||||||||||||| | | |||| ||||||||||| |||||||| |||||| ||||||| |
|
|
| T |
8992162 |
ctgagaaaggcatgagttaaaagacgaactcgcttatgcttttatatatcacatcccttcacttactttctt |
8992091 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 67 - 167
Target Start/End: Original strand, 10763878 - 10763978
Alignment:
| Q |
67 |
aaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaacagatactacacttgatcttagccaaaaggccgagaa |
166 |
Q |
| |
|
|||||||||||||||||| || || ||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||| ||||||| |
|
|
| T |
10763878 |
aaaaaagtaatttaatattgtatggaccattgatccacatatcagatattaaactgataagaacatatactacacttgatcttagtcaaaagaccgagaa |
10763977 |
T |
|
| Q |
167 |
a |
167 |
Q |
| |
|
| |
|
|
| T |
10763978 |
a |
10763978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 107 - 206
Target Start/End: Complemental strand, 8979389 - 8979290
Alignment:
| Q |
107 |
atcagatattaaaccgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaagatgggttggcttctgcttttatat |
206 |
Q |
| |
|
|||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||| ||||||||||| |
|
|
| T |
8979389 |
atcaaatattaaactgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaagatgaacttgcttatgcttttatat |
8979290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 8913078 - 8912989
Alignment:
| Q |
32 |
ccaatagcaagctactgaaatggtctctccccctcaaaaaagtaatttaatatc--gtgtgaaccattggtccacatatcagatattaaa |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||||||| | |||||||| |
|
|
| T |
8913078 |
ccaatagcaagctactgaaatggtctctccccctcaaaaaagtaatttaatatcatgtgtgattcattggaccacatattatatattaaa |
8912989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 57 - 146
Target Start/End: Original strand, 17225653 - 17225743
Alignment:
| Q |
57 |
tctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgat-aagaacagatactacacttgat |
146 |
Q |
| |
|
||||| ||||||||||||||||||||||||| ||| |||||| ||| ||||||| |||||||||||| || ||||||||||||||||||| |
|
|
| T |
17225653 |
tctcctcctcaaaaaagtaatttaatatcgtatgattcattggaccagatatcagttattaaaccgataaaaaacagatactacacttgat |
17225743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 67 - 172
Target Start/End: Original strand, 6471709 - 6471813
Alignment:
| Q |
67 |
aaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaacagatactacacttgatcttagccaaaaggccgagaa |
166 |
Q |
| |
|
|||||||||| |||||||| ||||| ||||| | || |||||||||||||||| ||||||||| ||||||||||| ||||||||||||||| ||| || |
|
|
| T |
6471709 |
aaaaaagtaacttaatatcatgtgatccattagaccgtatatcagatattaaactaataagaacatatactacactt-atcttagccaaaaggtcgaaaa |
6471807 |
T |
|
| Q |
167 |
aggtat |
172 |
Q |
| |
|
|||||| |
|
|
| T |
6471808 |
aggtat |
6471813 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 58 - 170
Target Start/End: Complemental strand, 35702005 - 35701893
Alignment:
| Q |
58 |
ctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaacagatactacacttgatcttagccaaaa |
157 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| |||| |||||||||| ||||||||| |||| |||| |||| |||||||||||||||||||| |
|
|
| T |
35702005 |
ctccccctcaaaaaagtaaactaatatcgtgtgacttgttggcccacatatcaaatattaaactaataaaaacaaataccacacttgatcttagccaaaa |
35701906 |
T |
|
| Q |
158 |
ggccgagaaaggt |
170 |
Q |
| |
|
| ||||||||| |
|
|
| T |
35701905 |
agttgagaaaggt |
35701893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 143
Target Start/End: Complemental strand, 17275950 - 17275862
Alignment:
| Q |
55 |
tctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaacagatactacactt |
143 |
Q |
| |
|
||||||||||||||||| |||||| |||||||||||| ||||||| |||||||| | | ||| ||| ||||||||| ||||||||||| |
|
|
| T |
17275950 |
tctctccccctcaaaaatgtaattcaatatcgtgtgatccattggaccacatattaaagattgaactgataagaacgtatactacactt |
17275862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 235
Target Start/End: Complemental strand, 8975724 - 8975634
Alignment:
| Q |
145 |
atcttagccaaaaggccgagaaaggtatgagttaaaagatgggttggcttctgcttttatatctcacatccactcacttgctttcttaaac |
235 |
Q |
| |
|
|||||||||||||||| ||||| |||||||| |||| ||| | |||| ||||||||||| |||||||| ||||||| |||||||||| |
|
|
| T |
8975724 |
atcttagccaaaaggcttagaaaaatatgagttgaaagttggactcgcttatgcttttatatatcacatcccttcacttgatttcttaaac |
8975634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 136 - 171
Target Start/End: Complemental strand, 39814150 - 39814115
Alignment:
| Q |
136 |
ctacacttgatcttagccaaaaggccgagaaaggta |
171 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||| |
|
|
| T |
39814150 |
ctacacttgatcatagccaaaaggccgagaaaggta |
39814115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 135; Significance: 2e-70; HSPs: 22)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 36 - 186
Target Start/End: Original strand, 14654309 - 14654459
Alignment:
| Q |
36 |
tagcaagctactgaaatggtctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaacagata |
135 |
Q |
| |
|
||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
14654309 |
tagcaagctactgaagtggcctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaactgataagaacagata |
14654408 |
T |
|
| Q |
136 |
ctacacttgatcttagccaaaaggccgagaaaggtatgagttaaaagatgg |
186 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
14654409 |
ctacacttgatcttagccaaaaggccgagaaaggtatgagttgaaagatgg |
14654459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 36 - 186
Target Start/End: Original strand, 14664100 - 14664250
Alignment:
| Q |
36 |
tagcaagctactgaaatggtctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaacagata |
135 |
Q |
| |
|
||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
14664100 |
tagcaagctactgaagtggcctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaactgataagaacagata |
14664199 |
T |
|
| Q |
136 |
ctacacttgatcttagccaaaaggccgagaaaggtatgagttaaaagatgg |
186 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
14664200 |
ctacacttgatcttagccaaaaggccgagaaaggtatgagttgaaagatgg |
14664250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 32 - 250
Target Start/End: Complemental strand, 33988212 - 33987994
Alignment:
| Q |
32 |
ccaatagcaagctactgaaatggtctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaaca |
131 |
Q |
| |
|
|||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
33988212 |
ccaatagcaagctattgaaatggcctctcccccttaaaaaagtaatttaatatcgtgtgactcattgagccacatatcagatattaaactgataagaaca |
33988113 |
T |
|
| Q |
132 |
gatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaagatgggttggcttctgcttttatatctcacatccactcacttgctttctt |
231 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||| ||||||||||| |||| ||| |||||||||||||| |
|
|
| T |
33988112 |
gatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaagatggactcacttatgcttttatatatcacctcccttcacttgctttctt |
33988013 |
T |
|
| Q |
232 |
aaacgagcgatgtgggact |
250 |
Q |
| |
|
||| | |||||||||||| |
|
|
| T |
33988012 |
gaacaaccgatgtgggact |
33987994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 34 - 231
Target Start/End: Complemental strand, 14708718 - 14708521
Alignment:
| Q |
34 |
aatagcaagctactgaaatggtctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaacaga |
133 |
Q |
| |
|
|||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
14708718 |
aatagcaagctactaaagtgacctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaactgataagaacaga |
14708619 |
T |
|
| Q |
134 |
tactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaagatgggttggcttctgcttttatatctcacatccactcacttgctttctt |
231 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||| | || ||||||||||||| |||| |||| |||||||||| |
|
|
| T |
14708618 |
tactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaagatgggctcactagtgcttttatatctgacattttctcaattgctttctt |
14708521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 36 - 207
Target Start/End: Original strand, 14669678 - 14669849
Alignment:
| Q |
36 |
tagcaagctactgaaatggtctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaacagata |
135 |
Q |
| |
|
|||||||||||| || | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
14669678 |
tagcaagctactaaagttgcctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaactgataagaacagata |
14669777 |
T |
|
| Q |
136 |
ctacacttgatcttagccaaaaggccgagaaaggtatgagttaaaagatgggttggcttctgcttttatatc |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||| | | | ||||||||||||| |
|
|
| T |
14669778 |
ctacacttgatcttagccaaaaggccgagaaaggtatgagttgaaagatgggctcgttgctgcttttatatc |
14669849 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 36 - 207
Target Start/End: Complemental strand, 14706226 - 14706055
Alignment:
| Q |
36 |
tagcaagctactgaaatggtctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaacagata |
135 |
Q |
| |
|
|||||||||||| || | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
14706226 |
tagcaagctactaaagttgcctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaactgataagaacagata |
14706127 |
T |
|
| Q |
136 |
ctacacttgatcttagccaaaaggccgagaaaggtatgagttaaaagatgggttggcttctgcttttatatc |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||| | | | ||||||||||||| |
|
|
| T |
14706126 |
ctacacttgatcttagccaaaaggccgagaaaggtatgagttgaaagatgggctcggtgctgcttttatatc |
14706055 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 36 - 207
Target Start/End: Complemental strand, 14681737 - 14681566
Alignment:
| Q |
36 |
tagcaagctactgaaatggtctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaacagata |
135 |
Q |
| |
|
|||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
14681737 |
tagcaagctactaaaatggcttctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaactgataagaacagata |
14681638 |
T |
|
| Q |
136 |
ctacacttgatcttagccaaaaggccgagaaaggtatgagttaaaagatgggttggcttctgcttttatatc |
207 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||| ||| ||||| | | | ||||||||||||| |
|
|
| T |
14681637 |
ctacacttgatcttagccaaaaggccgagaaaggtataagttgaaaaatgggctaggtgctgcttttatatc |
14681566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 36 - 207
Target Start/End: Complemental strand, 14674619 - 14674448
Alignment:
| Q |
36 |
tagcaagctactgaaatggtctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaacagata |
135 |
Q |
| |
|
|||||||||||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
14674619 |
tagcaagctactaaaatggcttctccccctcaaaaaagtaatttaatatcatgtgaaccattggtccacatatcagatattaaactgataagaacagata |
14674520 |
T |
|
| Q |
136 |
ctacacttgatcttagccaaaaggccgagaaaggtatgagttaaaagatgggttggcttctgcttttatatc |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||| || | | | ||||||||||||| |
|
|
| T |
14674519 |
ctacacttgatcttagccaaaaggccgagaaaggtatgagttggaagattggctaggtgctgcttttatatc |
14674448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 36 - 231
Target Start/End: Complemental strand, 14683888 - 14683693
Alignment:
| Q |
36 |
tagcaagctactgaaatggtctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaacagata |
135 |
Q |
| |
|
|||||||||||| || | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
14683888 |
tagcaagctactaaagttgcctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaactgataagaacagata |
14683789 |
T |
|
| Q |
136 |
ctacacttgatcttagccaaaaggccgagaaaggtatgagttaaaagatgggttggcttctgcttttatatctcacatccactcacttgctttctt |
231 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||| |||| | ||| | ||||||||| | ||||| |||| |||||||||| |
|
|
| T |
14683788 |
ctacacttgatcttagccaaaaggccgagaaaggtatgagttgaaatatggactagctgccgcttttataacagacatcttctcagttgctttctt |
14683693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 36 - 185
Target Start/End: Complemental strand, 14716429 - 14716280
Alignment:
| Q |
36 |
tagcaagctactgaaatggtctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaacagata |
135 |
Q |
| |
|
|||||||||||| || | | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
14716429 |
tagcaagctactaaagttgcctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatattagatattaaactgataagaacagata |
14716330 |
T |
|
| Q |
136 |
ctacacttgatcttagccaaaaggccgagaaaggtatgagttaaaagatg |
185 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
14716329 |
ctacacttgatcttagccaaaaggccgagaaaggtatgagttgaaagatg |
14716280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 36 - 207
Target Start/End: Complemental strand, 14679997 - 14679826
Alignment:
| Q |
36 |
tagcaagctactgaaatggtctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaacagata |
135 |
Q |
| |
|
|||||||||||| | |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
14679997 |
tagcaagctactaatatggcttctccccctcaaaaaagtaatttaatatcatgtgaaccattggtccacatatcagatattaaactgataagaacagata |
14679898 |
T |
|
| Q |
136 |
ctacacttgatcttagccaaaaggccgagaaaggtatgagttaaaagatgggttggcttctgcttttatatc |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||| || | | | ||||||||||||| |
|
|
| T |
14679897 |
ctacacttgatcttagccaaaaggccgagaaaggtatgagttggaagattggctaggtgctgcttttatatc |
14679826 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 36 - 174
Target Start/End: Complemental strand, 14652663 - 14652525
Alignment:
| Q |
36 |
tagcaagctactgaaatggtctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaacagata |
135 |
Q |
| |
|
|||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
14652663 |
tagcaagctactaaaatggcttctccccctcaaaaaagtaatttaatatcgtgtggaccattggtccacatatcagatattaaactgataagaacagata |
14652564 |
T |
|
| Q |
136 |
ctacacttgatcttagccaaaaggccgagaaaggtatga |
174 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14652563 |
ctacacttgatcttagccaaaaggccgagaaaggtatga |
14652525 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 36 - 174
Target Start/End: Complemental strand, 14662454 - 14662316
Alignment:
| Q |
36 |
tagcaagctactgaaatggtctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaacagata |
135 |
Q |
| |
|
|||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
14662454 |
tagcaagctactaaaatggcttctccccctcaaaaaagtaatttaatatcgtgtggaccattggtccacatatcagatattaaactgataagaacagata |
14662355 |
T |
|
| Q |
136 |
ctacacttgatcttagccaaaaggccgagaaaggtatga |
174 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14662354 |
ctacacttgatcttagccaaaaggccgagaaaggtatga |
14662316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 36 - 224
Target Start/End: Original strand, 28366167 - 28366356
Alignment:
| Q |
36 |
tagcaagctactgaaatggtctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtc-cacatatcagatattaaaccgataagaacagat |
134 |
Q |
| |
|
|||||||||||| ||| |||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||| |
|
|
| T |
28366167 |
tagcaagctactataatagtctctcccccttaaaaaagtaatttaatatcgtgtgacccattggggtcacatatcagatattaaactgataagaacagat |
28366266 |
T |
|
| Q |
135 |
actacacttgatcttagccaaaaggccgagaaaggtatgagttaaaagatgggttggcttctgcttttatatctcacatccactcacttg |
224 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| || ||||||||||||| ||| ||||||||||| |
|
|
| T |
28366267 |
actacacttgatcttagccaaaaggccgagaaaggtatgagttgaaagaggggttcgcatctgcttttatattcaacacccactcacttg |
28366356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 37 - 177
Target Start/End: Original strand, 38175500 - 38175640
Alignment:
| Q |
37 |
agcaagctactgaaatggtctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaacagatac |
136 |
Q |
| |
|
||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||| |
|
|
| T |
38175500 |
agcaagctactgaggtggtttctccccctcaaaaaagtaatttaatatcgtgtgacccattggaacacatatcagatattaaactgataagaacagatac |
38175599 |
T |
|
| Q |
137 |
tacacttgatcttagccaaaaggccgagaaaggtatgagtt |
177 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38175600 |
tacacttgatcttagccaaaaggccgagaaaggtatgagtt |
38175640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 57 - 178
Target Start/End: Original strand, 14667101 - 14667222
Alignment:
| Q |
57 |
tctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaacagatactacacttgatcttagccaaa |
156 |
Q |
| |
|
||||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
14667101 |
tctccccctagaaaaagtaatttaatatcatgtgaaccattggtccacgtatcagatattaaactaataagaacagatactacacttgatcttagccaaa |
14667200 |
T |
|
| Q |
157 |
aggccgagaaaggtatgagtta |
178 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
14667201 |
aggccgagaaaggtatgagtta |
14667222 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 79 - 231
Target Start/End: Complemental strand, 14676727 - 14676575
Alignment:
| Q |
79 |
taatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagtta |
178 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14676727 |
taatatcgtgtgaaccattggtccacatatcagatattaaactgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttg |
14676628 |
T |
|
| Q |
179 |
aaagatgggttggcttctgcttttatatctcacatccactcacttgctttctt |
231 |
Q |
| |
|
||| |||| | ||| | ||||||||| | ||||| |||| |||||||||| |
|
|
| T |
14676627 |
aaatatggactagctgccgcttttataacagacatcttctcagttgctttctt |
14676575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 33 - 171
Target Start/End: Original strand, 11872446 - 11872585
Alignment:
| Q |
33 |
caatagcaagctactgaaatggtctctccccctcaaaa-aagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaaca |
131 |
Q |
| |
|
||||||||||||| ||||||| |||||||||| |||| ||||||||||||||||||||| |||||| |||||||||| ||||||||| |||||||||| |
|
|
| T |
11872446 |
caatagcaagctatcgaaatggcctctcccccttaaaaaaagtaatttaatatcgtgtgacccattgaaccacatatcatatattaaactgataagaaca |
11872545 |
T |
|
| Q |
132 |
gatactacacttgatcttagccaaaaggccgagaaaggta |
171 |
Q |
| |
|
|||| ||||||||||||||| ||||||||||||||||||| |
|
|
| T |
11872546 |
gatagtacacttgatcttagtcaaaaggccgagaaaggta |
11872585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 37422247 - 37422175
Alignment:
| Q |
96 |
ttggtccacatatcagatattaaaccgataagaacagatactacacttgatcttagccaaaaggccgagaaag |
168 |
Q |
| |
|
|||| |||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||| |
|
|
| T |
37422247 |
ttggaccacatatcagatattaaactgataagaacatatgctacacttgatcttagccaaaaggccgagaaag |
37422175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 177
Target Start/End: Complemental strand, 28698625 - 28698550
Alignment:
| Q |
102 |
cacatatcagatattaaaccgataagaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagtt |
177 |
Q |
| |
|
||||||||| |||||||| ||||| || | |||||||| ||||||||||||||||| |||||||| ||||||||| |
|
|
| T |
28698625 |
cacatatcaaatattaaattgataaaaatatatactacatttgatcttagccaaaagaccgagaaatgtatgagtt |
28698550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 120
Target Start/End: Complemental strand, 14703193 - 14703134
Alignment:
| Q |
61 |
cccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaac |
120 |
Q |
| |
|
||||| ||||| ||||||||||||||||| || |||||||||||||||| ||||||||| |
|
|
| T |
14703193 |
cccctaaaaaatttaatttaatatcgtgtggactattggtccacatatcaaatattaaac |
14703134 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 7448393 - 7448480
Alignment:
| Q |
33 |
caatagcaagctactgaaatggtctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaac |
120 |
Q |
| |
|
||||||||| ||| || ||||| ||| ||| |||||||||||||| |||||||| | | |||| | |||||||||||||||||||| |
|
|
| T |
7448393 |
caatagcaaactattgtgatggtttcttcccttcaaaaaagtaattcaatatcgtataattcatttgaccacatatcagatattaaac |
7448480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 132; Significance: 2e-68; HSPs: 8)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 57 - 251
Target Start/End: Original strand, 1716441 - 1716635
Alignment:
| Q |
57 |
tctccccctcaaaaaagtaatttaatatcgtgtgaaccatt-ggtccacatatcagatattaaaccgataagaacagatactacacttgatcttagccaa |
155 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||| ||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
1716441 |
tctcccccttaaaaaagtaatttaatatcgtgtgacccatttggaccacatatcagatattaaactgataagaacagatactacacttgatcttagccaa |
1716540 |
T |
|
| Q |
156 |
aaggccgagaaaggtatgagttaaaagatgggttggcttctgcttttatatctcacatccactcacttgctttcttaaacgagcgatgtgggacta |
251 |
Q |
| |
|
|||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||| | ||| ||||||||||||||| |
|
|
| T |
1716541 |
aaggccgagaaaggtatgagttaaaagatgcactcgcttcttattttatatctcacatccactcacttgctttc-tgaactagcgatgtgggacta |
1716635 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 32 - 223
Target Start/End: Complemental strand, 3643782 - 3643591
Alignment:
| Q |
32 |
ccaatagcaagctactgaaatggtctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaaca |
131 |
Q |
| |
|
|||||||||||||| || || || ||||||||| ||||||||||||||||||||||||| ||| ||| |||||||||||||||||||| |||||||||| |
|
|
| T |
3643782 |
ccaatagcaagctattgtgatagtttctcccccttaaaaaagtaatttaatatcgtgtgacccaatgggccacatatcagatattaaactgataagaaca |
3643683 |
T |
|
| Q |
132 |
gatactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaagatgggttggcttctgcttttatatctcacatccactcactt |
223 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| || |||| | | ||||||| ||||||||| ||||||||||||||| |
|
|
| T |
3643682 |
gatactacacttgatcttagccaaaaggccgagaaaggtatgaatttaaagtaagtctcgcttctgtttttatatcccacatccactcactt |
3643591 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 56 - 174
Target Start/End: Complemental strand, 7525086 - 7524968
Alignment:
| Q |
56 |
ctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaacagatactacacttgatcttagccaa |
155 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
7525086 |
ctctccccctcaaaaaagtaatttaatatcgtgtgatccattggatcacatatcagatattaaactgataagaacagatactacacttgatcttagccaa |
7524987 |
T |
|
| Q |
156 |
aaggccgagaaaggtatga |
174 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
7524986 |
aaggccgagaaaggtatga |
7524968 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 56 - 170
Target Start/End: Complemental strand, 4103363 - 4103249
Alignment:
| Q |
56 |
ctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaacagatactacacttgatcttagccaa |
155 |
Q |
| |
|
||||| |||| ||||||| |||||||||||||||| || ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |
|
|
| T |
4103363 |
ctctctccctaaaaaaagcaatttaatatcgtgtggactattgggccacatatcagatattaaactgataagaacagatactacacttgatcttaaccaa |
4103264 |
T |
|
| Q |
156 |
aaggccgagaaaggt |
170 |
Q |
| |
|
|| || ||||||||| |
|
|
| T |
4103263 |
aatgctgagaaaggt |
4103249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 141
Target Start/End: Complemental strand, 5350781 - 5350672
Alignment:
| Q |
32 |
ccaatagcaagctactgaaatggtctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaaca |
131 |
Q |
| |
|
|||||||||||||||| ||| |||| |||||||| ||| |||||||||||||||| ||||||| |||||||||||||||||||| ||||| || | |
|
|
| T |
5350781 |
ccaatagcaagctactttggtggactctacccctcaagaaataaatttaatatcgtgtggaccattgtcccacatatcagatattaaactgataacaata |
5350682 |
T |
|
| Q |
132 |
gatactacac |
141 |
Q |
| |
|
|||||||||| |
|
|
| T |
5350681 |
gatactacac |
5350672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 172
Target Start/End: Complemental strand, 16037966 - 16037861
Alignment:
| Q |
65 |
tcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaacagatactacacttgatcttagccaaaaggccgag |
164 |
Q |
| |
|
||||||||||||||||||||||| ||| ||||| | |||| ||||| ||||||| ||||||||| ||||||||||||||||||| ||| ||||||| |
|
|
| T |
16037966 |
tcaaaaaagtaatttaatatcgtttgacccattagaccac-tatcaaatattaagataataagaacaaatactacacttgatcttag-aaaacggccgag |
16037869 |
T |
|
| Q |
165 |
aaaggtat |
172 |
Q |
| |
|
||| |||| |
|
|
| T |
16037868 |
aaaagtat |
16037861 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 56 - 120
Target Start/End: Complemental strand, 13636430 - 13636366
Alignment:
| Q |
56 |
ctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaac |
120 |
Q |
| |
|
||||||||||||| || |||||||||| |||||| ||| ||| ||||||||||||||||||||| |
|
|
| T |
13636430 |
ctctccccctcaagaacttaatttaataccgtgtggaccgttgatccacatatcagatattaaac |
13636366 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 103 - 167
Target Start/End: Original strand, 19261152 - 19261216
Alignment:
| Q |
103 |
acatatcagatattaaaccgataagaacagatactacacttgatcttagccaaaaggccgagaaa |
167 |
Q |
| |
|
|||||||||||||| ||| |||||||||| ||| |||||||||||||| |||||||| |||||| |
|
|
| T |
19261152 |
acatatcagatatttaacggataagaacatatattacacttgatcttaatcaaaaggctgagaaa |
19261216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 126; Significance: 6e-65; HSPs: 7)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 34 - 207
Target Start/End: Original strand, 10791619 - 10791792
Alignment:
| Q |
34 |
aatagcaagctactgaaatggtctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaacaga |
133 |
Q |
| |
|
|||||||||||| |||| ||| ||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||| |||||||||||| |
|
|
| T |
10791619 |
aatagcaagctattgaagtggcttctccccctcaaaaaagtaatttaatatcatgtgacccattggatcacatatcagatattaaactgataagaacaga |
10791718 |
T |
|
| Q |
134 |
tactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaagatgggttggcttctgcttttatatc |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||| |
|
|
| T |
10791719 |
tactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaagaagagttggcttctgcttttatatc |
10791792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 34 - 207
Target Start/End: Original strand, 10795857 - 10796030
Alignment:
| Q |
34 |
aatagcaagctactgaaatggtctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaacaga |
133 |
Q |
| |
|
|||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||| |
|
|
| T |
10795857 |
aatagcaagctattgaagtggcttctccccctcaaaaaagtaatttaatatcgtgtgacccattgggtcacatatcagatattaaactgataagaacaga |
10795956 |
T |
|
| Q |
134 |
tactacacttgatcttagccaaaaggccgagaaaggtatgagttaaaagatgggttggcttctgcttttatatc |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||| | | ||||||||||||||||||| |
|
|
| T |
10795957 |
tactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaagaagagctggcttctgcttttatatc |
10796030 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 32 - 174
Target Start/End: Complemental strand, 30521384 - 30521242
Alignment:
| Q |
32 |
ccaatagcaagctactgaaatggtctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaaca |
131 |
Q |
| |
|
|||||||||||||| | | ||| ||||||||||||||||| |||| |||||||||||| | |||||||||||||||||||||||| |||||||||| |
|
|
| T |
30521384 |
ccaatagcaagctatagtagtggactctccccctcaaaaaataaattgaatatcgtgtgaggcgatggtccacatatcagatattaaactgataagaaca |
30521285 |
T |
|
| Q |
132 |
gatactacacttgatcttagccaaaaggccgagaaaggtatga |
174 |
Q |
| |
|
||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
30521284 |
gatactacacttgatctcagccaaaaggtcgagaaaggtatga |
30521242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 47 - 172
Target Start/End: Complemental strand, 8875818 - 8875691
Alignment:
| Q |
47 |
tgaaatggtctctccccctcaaaaaagta--atttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaacagatactacacttg |
144 |
Q |
| |
|
||||||||| | || |||||||||||||| |||||||||||||| | | ||||| ||||||||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
8875818 |
tgaaatggtttatctccctcaaaaaagtataatttaatatcgtgtaatctattggaccacatatcagatattaaattgataagaacagatattacacttg |
8875719 |
T |
|
| Q |
145 |
atcttagccaaaaggccgagaaaggtat |
172 |
Q |
| |
|
|||||||||||||||||| |||| |||| |
|
|
| T |
8875718 |
atcttagccaaaaggccgggaaatgtat |
8875691 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 36 - 120
Target Start/End: Complemental strand, 13136692 - 13136608
Alignment:
| Q |
36 |
tagcaagctactgaaatggtctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaac |
120 |
Q |
| |
|
||||||||||||| ||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
13136692 |
tagcaagctactgcaatggctcctccctctcaaaaaagtaatttaatatcgtgtggaccattggtccacatatcagatattaaac |
13136608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 57 - 131
Target Start/End: Complemental strand, 11333347 - 11333273
Alignment:
| Q |
57 |
tctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaaca |
131 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||| |||||||||| |
|
|
| T |
11333347 |
tctccccctcaaaaaagtaatttaatatcgtgtgatccgttggaccacatatcagatattaaactgataagaaca |
11333273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 21216131 - 21216032
Alignment:
| Q |
68 |
aaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaacagatactacacttgatcttagccaaaaggccgagaaa |
167 |
Q |
| |
|
||||||||||||||||| ||||| ||||| |||||||| ||||||||||| |||||||| |||| ||| || ||||||||| |||||| || ||||| |
|
|
| T |
21216131 |
aaaaagtaatttaatattttgtgattcattgagccacatataagatattaaactgataagaatagatgctatacatgatcttagtcaaaagaccaagaaa |
21216032 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 74; Significance: 6e-34; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 57 - 174
Target Start/End: Complemental strand, 27134628 - 27134511
Alignment:
| Q |
57 |
tctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaacagatactacacttgatcttagccaaa |
156 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||| |||| | ||||||||||||||||||||| |||||||||||||||| | |||||||||| ||| |
|
|
| T |
27134628 |
tctccccctcaaaaaagtaatttaatatcgtttgactcattagaccacatatcagatattaaaccaataagaacagatactagatttgatcttagtgaaa |
27134529 |
T |
|
| Q |
157 |
aggccgagaaaggtatga |
174 |
Q |
| |
|
||||||| |||||||||| |
|
|
| T |
27134528 |
aggccgaaaaaggtatga |
27134511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 56 - 168
Target Start/End: Complemental strand, 8128260 - 8128149
Alignment:
| Q |
56 |
ctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaaccgataagaacagatactacacttgatcttagccaa |
155 |
Q |
| |
|
||||||||||||| ||| |||||||||| |||||| ||||||| |||||||||| ||||||||| | ||||||| ||||||||||| |||||| |||| |
|
|
| T |
8128260 |
ctctccccctcaagaaataaatttaatattgtgtga-ccattggcccacatatcatatattaaactaaaaagaacatatactacacttaatcttaaccaa |
8128162 |
T |
|
| Q |
156 |
aaggccgagaaag |
168 |
Q |
| |
|
||| |||||||| |
|
|
| T |
8128161 |
aagaacgagaaag |
8128149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0549 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0549
Description:
Target: scaffold0549; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 5538 - 5450
Alignment:
| Q |
32 |
ccaatagcaagctactgaaatggtctctccccctcaaaaaagtaatttaatatcgtgtgaaccattggtccacatatcagatattaaac |
120 |
Q |
| |
|
|||||||||||||| || ||| |||||| |||||||||| ||||||||||||||||||| ||||| ||| |||||||||||||||| |
|
|
| T |
5538 |
ccaatagcaagctattgtggtggactctccacctcaaaaaataaatttaatatcgtgtgaacaattggcccatatatcagatattaaac |
5450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 15758562 - 15758608
Alignment:
| Q |
126 |
agaacagatactacacttgatcttagccaaaaggccgagaaaggtat |
172 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||| ||||||||||| |
|
|
| T |
15758562 |
agaacagatattacacttgatcttagccaaaaggctgagaaaggtat |
15758608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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