View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11337_high_21 (Length: 213)
Name: NF11337_high_21
Description: NF11337
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11337_high_21 |
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Alignment Details
Target: chr2 (Bit Score: 126; Significance: 4e-65; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 18 - 163
Target Start/End: Original strand, 30826785 - 30826929
Alignment:
| Q |
18 |
agttgcagttaaacatcaacaagcctacgcttattcaatcttctatgttcatccgagtgaaggatgaaattcaatcaccattattcctttactcatttga |
117 |
Q |
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| T |
30826785 |
agttgcagttcaacatcaacaagcctatgcttattcaatcttctatgttcatccgagtgaaggatgaaattcaatcaccattattcctttactcatttga |
30826884 |
T |
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| Q |
118 |
tccaattaacttgattggagcaggtctgaggcaacgagctcttggt |
163 |
Q |
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||||||||||||||||||||||||||| | |||||||||||||||| |
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| T |
30826885 |
tccaattaacttgattggagcaggtct-atgcaacgagctcttggt |
30826929 |
T |
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