View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11337_low_19 (Length: 228)
Name: NF11337_low_19
Description: NF11337
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11337_low_19 |
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Alignment Details
Target: chr1 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 37614694 - 37614484
Alignment:
| Q |
1 |
ttttaccagttggtggatcatccaactggatttcatgcagtggaagccaaaccaagagttccttcaccttcacaccagttagcttcttgatcttaccaac |
100 |
Q |
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| T |
37614694 |
ttttaccagttggtggatcatccaactggatttcatgcagtggaagccaaaccaagagttccttcaccttcacaccagttagcttcttgatcttaccaac |
37614595 |
T |
|
| Q |
101 |
ctcaacagtggcagtgacttcagtaccataggtcacaagcctatcaactttctcaaacttgtgagtatagcttgctttctgcttaagccaaacaaaacca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37614594 |
ctcaacagtggcagtgacttcagtaccataggtcacaagcctatcaactttctcaaacttgtgagtatagcttgctttctgcttaagccaaacaaaacca |
37614495 |
T |
|
| Q |
201 |
ctctccctatg |
211 |
Q |
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||||||||||| |
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| T |
37614494 |
ctctccctatg |
37614484 |
T |
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