View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1133_high_25 (Length: 342)

Name: NF1133_high_25
Description: NF1133
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1133_high_25
NF1133_high_25
[»] chr4 (5 HSPs)
chr4 (55-332)||(39886443-39886720)
chr4 (99-160)||(1137759-1137820)
chr4 (30-78)||(4471102-4471150)
chr4 (93-135)||(8469364-8469406)
chr4 (96-153)||(50742805-50742862)
[»] chr1 (6 HSPs)
chr1 (93-160)||(37811893-37811960)
chr1 (93-152)||(4549889-4549948)
chr1 (93-144)||(35669013-35669064)
chr1 (30-71)||(45667840-45667881)
chr1 (37-77)||(35017512-35017552)
chr1 (93-125)||(47917277-47917309)
[»] chr7 (5 HSPs)
chr7 (93-160)||(25670548-25670615)
chr7 (30-73)||(46945840-46945883)
chr7 (37-77)||(12110298-12110338)
chr7 (93-145)||(19719047-19719099)
chr7 (93-125)||(25511667-25511699)
[»] chr3 (6 HSPs)
chr3 (93-160)||(34707458-34707525)
chr3 (37-77)||(34958266-34958306)
chr3 (93-125)||(39602207-39602239)
chr3 (93-159)||(23808027-23808093)
chr3 (93-158)||(26878241-26878307)
chr3 (37-77)||(139923-139963)
[»] chr2 (6 HSPs)
chr2 (93-156)||(39621992-39622055)
chr2 (93-160)||(787373-787440)
chr2 (99-160)||(5902511-5902572)
chr2 (93-125)||(16947067-16947099)
chr2 (93-125)||(17017732-17017764)
chr2 (36-76)||(32821746-32821786)
[»] chr8 (5 HSPs)
chr8 (95-160)||(8629499-8629564)
chr8 (93-160)||(9700042-9700109)
chr8 (36-77)||(34522148-34522189)
chr8 (110-159)||(41442416-41442465)
chr8 (93-160)||(1930076-1930144)
[»] chr6 (2 HSPs)
chr6 (93-160)||(33887871-33887938)
chr6 (94-160)||(769180-769246)
[»] chr5 (2 HSPs)
chr5 (30-77)||(36646171-36646218)
chr5 (30-77)||(37063166-37063213)


Alignment Details
Target: chr4 (Bit Score: 251; Significance: 1e-139; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 55 - 332
Target Start/End: Complemental strand, 39886720 - 39886443
Alignment:
Q  55 ttatcacacaagataaaataaaggggaacnnnnnnnnnataagttgaaaacaatttatgaacatgtcataaaatgctttcacaagttctctcaaacagtg 154  Q
    |||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39886720 ttatcacacaagataaaataaaggggaactgtttttttataagttgaaaacaatttatgaacatgtcataaaatgctttcacaagttctctcaaacagtg 39886621  T
Q  155 tcacaactcacgagtgtttatgctaatagataaagaaaaataagctaatccaaacatactcttaattacacttacaactgagaggtctacaagttttata 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39886620 tcacaactcacgagtgtttatgctaatagataaagaaaaataagctaatccaaacatactcttaattacacttacaactgagaggtctacaagttttata 39886521  T
Q  255 tcaagtgctgaattgtcatctttaatagcacctccagtccaatctaccatctctactctaaagatttcaccagtatta 332  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39886520 tcaagtgctgaattgtcatctttaatagcacctccagtccaatctaccatctctactctaaagatttcaccagtatta 39886443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 160
Target Start/End: Original strand, 1137759 - 1137820
Alignment:
Q  99 tgaaaacaatttatgaacatgtcataaaatgctttcacaagttctctcaaacagtgtcacaa 160  Q
    ||||||||| ||||||||||||||||| ||| ||||| ||||||||  ||||||||||||||    
T  1137759 tgaaaacaacttatgaacatgtcataagatgttttcataagttctcctaaacagtgtcacaa 1137820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 4471102 - 4471150
Alignment:
Q  30 ataaatgcttatgaataaactatttttatcacacaagataaaataaagg 78  Q
    |||| |||||||| ||||||||||||||| ||| |||||||||||||||    
T  4471102 ataagtgcttatgcataaactatttttataacaaaagataaaataaagg 4471150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 135
Target Start/End: Complemental strand, 8469406 - 8469364
Alignment:
Q  93 ataagttgaaaacaatttatgaacatgtcataaaatgctttca 135  Q
    ||||| ||||||||| |||||||||||||||||| ||||||||    
T  8469406 ataagctgaaaacaacttatgaacatgtcataaattgctttca 8469364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 153
Target Start/End: Complemental strand, 50742862 - 50742805
Alignment:
Q  96 agttgaaaacaatttatgaacatgtcataaaatgctttcacaagttctctcaaacagt 153  Q
    |||||||||||   |||||||||||||| || || ||||| |||||||||||||||||    
T  50742862 agttgaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagt 50742805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 93 - 160
Target Start/End: Original strand, 37811893 - 37811960
Alignment:
Q  93 ataagttgaaaacaatttatgaacatgtcataaaatgctttcacaagttctctcaaacagtgtcacaa 160  Q
    |||||||||||||| ||||||||||||||||||  || ||||| |||||||||||| |||| ||||||    
T  37811893 ataagttgaaaacagtttatgaacatgtcataagctgttttcataagttctctcaaccagtatcacaa 37811960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 93 - 152
Target Start/End: Original strand, 4549889 - 4549948
Alignment:
Q  93 ataagttgaaaacaatttatgaacatgtcataaaatgctttcacaagttctctcaaacag 152  Q
    ||||| ||||||||| |||||||||||||||||  || ||||| |||||||| |||||||    
T  4549889 ataagctgaaaacaacttatgaacatgtcataatctgttttcagaagttctcccaaacag 4549948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 35669013 - 35669064
Alignment:
Q  93 ataagttgaaaacaatttatgaacatgtcataaaatgctttcacaagttctc 144  Q
    ||||||||||||||||||||| |||| ||||||  |||||||| ||||||||    
T  35669013 ataagttgaaaacaatttatggacatatcataagctgctttcataagttctc 35669064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 71
Target Start/End: Complemental strand, 45667881 - 45667840
Alignment:
Q  30 ataaatgcttatgaataaactatttttatcacacaagataaa 71  Q
    ||||||||||||||||||  ||||||||| ||||||||||||    
T  45667881 ataaatgcttatgaataagttatttttattacacaagataaa 45667840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 35017512 - 35017552
Alignment:
Q  37 cttatgaataaactatttttatcacacaagataaaataaag 77  Q
    ||||||||||| |||||||||| | ||||||||||||||||    
T  35017512 cttatgaataagctatttttataatacaagataaaataaag 35017552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 125
Target Start/End: Original strand, 47917277 - 47917309
Alignment:
Q  93 ataagttgaaaacaatttatgaacatgtcataa 125  Q
    ||||||||||||||| |||||||||||||||||    
T  47917277 ataagttgaaaacaacttatgaacatgtcataa 47917309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000003; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 160
Target Start/End: Complemental strand, 25670615 - 25670548
Alignment:
Q  93 ataagttgaaaacaatttatgaacatgtcataaaatgctttcacaagttctctcaaacagtgtcacaa 160  Q
    ||||| |||||||||||||| ||||||||||||  || ||||| ||||| ||||||||||| ||||||    
T  25670615 ataagctgaaaacaatttattaacatgtcataagttgttttcataagttttctcaaacagtctcacaa 25670548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 30 - 73
Target Start/End: Original strand, 46945840 - 46945883
Alignment:
Q  30 ataaatgcttatgaataaactatttttatcacacaagataaaat 73  Q
    |||||||||||||||||| |||||| ||| ||||||||||||||    
T  46945840 ataaatgcttatgaataagctatttgtataacacaagataaaat 46945883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 12110298 - 12110338
Alignment:
Q  37 cttatgaataaactatttttatcacacaagataaaataaag 77  Q
    ||||||||||| |||||| ||| ||||||||||||||||||    
T  12110298 cttatgaataacctatttctattacacaagataaaataaag 12110338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 145
Target Start/End: Original strand, 19719047 - 19719099
Alignment:
Q  93 ataagttgaaaacaatttatgaacatgtcataaaatgctttcacaagttctct 145  Q
    ||||| |||||||| ||||||||||||||||||  || ||||| |||||||||    
T  19719047 ataagctgaaaacagtttatgaacatgtcataagttgttttcataagttctct 19719099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 125
Target Start/End: Original strand, 25511667 - 25511699
Alignment:
Q  93 ataagttgaaaacaatttatgaacatgtcataa 125  Q
    |||||||||| ||||||||||||||||||||||    
T  25511667 ataagttgaagacaatttatgaacatgtcataa 25511699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000003; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 160
Target Start/End: Complemental strand, 34707525 - 34707458
Alignment:
Q  93 ataagttgaaaacaatttatgaacatgtcataaaatgctttcacaagttctctcaaacagtgtcacaa 160  Q
    ||||||||||||||| ||||| |||||||| ||  || ||||| ||||||||||||||||| ||||||    
T  34707525 ataagttgaaaacaacttatggacatgtcacaagttgttttcaaaagttctctcaaacagtctcacaa 34707458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 34958266 - 34958306
Alignment:
Q  37 cttatgaataaactatttttatcacacaagataaaataaag 77  Q
    |||||||||||||||||| ||| ||||||||||||||||||    
T  34958266 cttatgaataaactatttctataacacaagataaaataaag 34958306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 125
Target Start/End: Complemental strand, 39602239 - 39602207
Alignment:
Q  93 ataagttgaaaacaatttatgaacatgtcataa 125  Q
    |||||||||||||||||||||||||||||||||    
T  39602239 ataagttgaaaacaatttatgaacatgtcataa 39602207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 159
Target Start/End: Complemental strand, 23808093 - 23808027
Alignment:
Q  93 ataagttgaaaacaatttatgaacatgtcataaaatgctttcacaagttctctcaaacagtgtcaca 159  Q
    ||||| |||||||||||| ||||||||||||||  |||||||| ||||| || ||||| || |||||    
T  23808093 ataagatgaaaacaatttgtgaacatgtcataagctgctttcataagttttcccaaaccgtctcaca 23808027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 158
Target Start/End: Original strand, 26878241 - 26878307
Alignment:
Q  93 ataagttgaaaacaatttatgaaca-tgtcataaaatgctttcacaagttctctcaaacagtgtcac 158  Q
    ||||| |||||||| |||||||||| ||||||||  |  ||||||||||||||||||||||| ||||    
T  26878241 ataagctgaaaacagtttatgaacaatgtcataagctattttcacaagttctctcaaacagtttcac 26878307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 139923 - 139963
Alignment:
Q  37 cttatgaataaactatttttatcacacaagataaaataaag 77  Q
    ||||||||||| |||||| ||| ||||||||||||||||||    
T  139923 cttatgaataagctatttctattacacaagataaaataaag 139963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000003; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 156
Target Start/End: Original strand, 39621992 - 39622055
Alignment:
Q  93 ataagttgaaaacaatttatgaacatgtcataaaatgctttcacaagttctctcaaacagtgtc 156  Q
    ||||| |||||||||||||||||  ||||||||  || ||||| ||||||||||||||||||||    
T  39621992 ataagctgaaaacaatttatgaatttgtcataagttgttttcataagttctctcaaacagtgtc 39622055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 93 - 160
Target Start/End: Original strand, 787373 - 787440
Alignment:
Q  93 ataagttgaaaacaatttatgaacatgtcataaaatgctttcacaagttctctcaaacagtgtcacaa 160  Q
    ||||| ||||||||  ||||| |||||||||||  || ||||| |||||||| |||||||||||||||    
T  787373 ataagctgaaaacagcttatggacatgtcataagctgttttcataagttctcacaaacagtgtcacaa 787440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 160
Target Start/End: Complemental strand, 5902572 - 5902511
Alignment:
Q  99 tgaaaacaatttatgaacatgtcataaaatgctttcacaagttctctcaaacagtgtcacaa 160  Q
    |||||||| ||||||||||||||||||  || ||||| |||||||  |||||||| ||||||    
T  5902572 tgaaaacagtttatgaacatgtcataagctgttttcataagttcttccaaacagtctcacaa 5902511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 125
Target Start/End: Original strand, 16947067 - 16947099
Alignment:
Q  93 ataagttgaaaacaatttatgaacatgtcataa 125  Q
    |||||||||||| ||||||||||||||||||||    
T  16947067 ataagttgaaaataatttatgaacatgtcataa 16947099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 125
Target Start/End: Original strand, 17017732 - 17017764
Alignment:
Q  93 ataagttgaaaacaatttatgaacatgtcataa 125  Q
    |||||||||||| ||||||||||||||||||||    
T  17017732 ataagttgaaaataatttatgaacatgtcataa 17017764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 32821746 - 32821786
Alignment:
Q  36 gcttatgaataaactatttttatcacacaagataaaataaa 76  Q
    |||||||||||| |||||||||| ||| |||||||||||||    
T  32821746 gcttatgaataagctatttttataacaaaagataaaataaa 32821786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000005; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 95 - 160
Target Start/End: Original strand, 8629499 - 8629564
Alignment:
Q  95 aagttgaaaacaatttatgaacatgtcataaaatgctttcacaagttctctcaaacagtgtcacaa 160  Q
    ||||||||||||| |||||| ||||||||||  || ||||| |||||||||||||| || ||||||    
T  8629499 aagttgaaaacaacttatgatcatgtcataagttgttttcataagttctctcaaacggtctcacaa 8629564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 93 - 160
Target Start/End: Original strand, 9700042 - 9700109
Alignment:
Q  93 ataagttgaaaacaatttatgaacatgtcataaaatgctttcacaagttctctcaaacagtgtcacaa 160  Q
    ||||| ||||||||  ||||| |||||||||||| || ||||||||| ||||||||| ||| ||||||    
T  9700042 ataaggtgaaaacagcttatggacatgtcataaattgatttcacaagctctctcaaatagtctcacaa 9700109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 77
Target Start/End: Complemental strand, 34522189 - 34522148
Alignment:
Q  36 gcttatgaataaactatttttatcacacaagataaaataaag 77  Q
    |||||||||||| |||||| ||| ||||||||||||||||||    
T  34522189 gcttatgaataagctatttctatgacacaagataaaataaag 34522148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 41442465 - 41442416
Alignment:
Q  110 tatgaacatgtcataaaatgctttcacaagttctctcaaacagtgtcaca 159  Q
    ||||||||||||||||| || ||||| ||||||| ||||||||| |||||    
T  41442465 tatgaacatgtcataaattgttttcataagttctgtcaaacagtctcaca 41442416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 160
Target Start/End: Original strand, 1930076 - 1930144
Alignment:
Q  93 ataagttgaaaacaatttatgaaca-tgtcataaaatgctttcacaagttctctcaaacagtgtcacaa 160  Q
    ||||| ||||||||  ||||||||| ||||||||| || |||||||||||||| |||| | ||||||||    
T  1930076 ataagctgaaaacagcttatgaacaatgtcataaactgttttcacaagttctcccaaataatgtcacaa 1930144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 93 - 160
Target Start/End: Original strand, 33887871 - 33887938
Alignment:
Q  93 ataagttgaaaacaatttatgaacatgtcataaaatgctttcacaagttctctcaaacagtgtcacaa 160  Q
    ||||||||||||||| || ||||||||||||||  |  ||||| || |||||||||||| ||||||||    
T  33887871 ataagttgaaaacaacttgtgaacatgtcataagctattttcataaattctctcaaacaatgtcacaa 33887938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 160
Target Start/End: Original strand, 769180 - 769246
Alignment:
Q  94 taagttgaaaacaatttatgaacatgtcataaaatgctttcacaagttctctcaaacagtgtcacaa 160  Q
    |||||||||||||  ||||||||||||||||| ||| ||||| ||||||   |||||||| ||||||    
T  769180 taagttgaaaacagcttatgaacatgtcataagatgttttcataagttcatccaaacagtctcacaa 769246  T

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Target: chr5 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 36646171 - 36646218
Alignment:
Q  30 ataaatgcttatgaataaactatttttatcacacaagataaaataaag 77  Q
    ||||||||||||| ||||||||||||||| ||| |||||||| |||||    
T  36646171 ataaatgcttatgcataaactatttttataacataagataaactaaag 36646218  T

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Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 37063213 - 37063166
Alignment:
Q  30 ataaatgcttatgaataaactatttttatcacacaagataaaataaag 77  Q
    ||||||||||||| ||||||||||| ||| ||| ||||||||||||||    
T  37063213 ataaatgcttatgtataaactatttctataacaaaagataaaataaag 37063166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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