View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1133_high_46 (Length: 211)

Name: NF1133_high_46
Description: NF1133
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1133_high_46
NF1133_high_46
[»] chr2 (33 HSPs)
chr2 (9-108)||(19525331-19525430)
chr2 (158-211)||(19525428-19525481)
chr2 (142-211)||(3943856-3943925)
chr2 (146-211)||(41329958-41330023)
chr2 (142-211)||(11941222-11941291)
chr2 (142-211)||(31778147-31778216)
chr2 (142-211)||(33827585-33827654)
chr2 (142-211)||(35171916-35171985)
chr2 (142-211)||(44946065-44946134)
chr2 (146-210)||(44610156-44610220)
chr2 (142-199)||(14486953-14487010)
chr2 (142-211)||(15038075-15038144)
chr2 (142-211)||(28668989-28669058)
chr2 (142-199)||(34516426-34516483)
chr2 (142-211)||(36242324-36242393)
chr2 (53-97)||(10953494-10953538)
chr2 (142-197)||(2140498-2140553)
chr2 (142-197)||(25293289-25293344)
chr2 (142-197)||(44929858-44929913)
chr2 (142-196)||(18976467-18976521)
chr2 (142-199)||(12543271-12543328)
chr2 (144-197)||(19054156-19054209)
chr2 (142-199)||(30466842-30466899)
chr2 (59-117)||(26521164-26521219)
chr2 (142-198)||(43374342-43374398)
chr2 (142-209)||(5394135-5394202)
chr2 (142-193)||(8192364-8192415)
chr2 (142-197)||(18692090-18692145)
chr2 (145-195)||(27269359-27269409)
chr2 (142-199)||(9400973-9401030)
chr2 (138-199)||(19849961-19850022)
chr2 (155-196)||(24196133-24196174)
chr2 (53-89)||(34553966-34554002)
[»] chr6 (21 HSPs)
chr6 (142-211)||(9239091-9239160)
chr6 (47-117)||(5964278-5964348)
chr6 (142-211)||(1345051-1345120)
chr6 (142-211)||(9844054-9844123)
chr6 (142-211)||(11448987-11449056)
chr6 (142-211)||(15360110-15360179)
chr6 (142-211)||(34147462-34147531)
chr6 (142-211)||(34160078-34160147)
chr6 (142-210)||(14212999-14213067)
chr6 (142-196)||(3222648-3222702)
chr6 (142-211)||(654158-654227)
chr6 (142-211)||(21982333-21982401)
chr6 (144-211)||(9208368-9208435)
chr6 (144-211)||(28672183-28672250)
chr6 (143-209)||(17081067-17081133)
chr6 (142-196)||(21148523-21148577)
chr6 (142-199)||(11007293-11007350)
chr6 (155-199)||(12390553-12390597)
chr6 (53-88)||(4433100-4433135)
chr6 (148-211)||(17149474-17149537)
chr6 (142-211)||(9690650-9690719)
[»] chr5 (40 HSPs)
chr5 (142-211)||(10869577-10869646)
chr5 (142-211)||(18207323-18207392)
chr5 (142-211)||(8484673-8484742)
chr5 (142-211)||(27498743-27498812)
chr5 (142-211)||(32059452-32059521)
chr5 (142-197)||(11926513-11926568)
chr5 (142-208)||(22693054-22693120)
chr5 (142-211)||(19145424-19145492)
chr5 (142-211)||(30485944-30486013)
chr5 (142-211)||(35425129-35425198)
chr5 (143-211)||(26009277-26009345)
chr5 (148-211)||(15641123-15641186)
chr5 (47-117)||(39646428-39646499)
chr5 (142-196)||(11464920-11464974)
chr5 (142-196)||(19456223-19456277)
chr5 (142-200)||(38630991-38631049)
chr5 (142-211)||(4603893-4603962)
chr5 (142-211)||(13038467-13038536)
chr5 (142-211)||(33709515-33709584)
chr5 (142-195)||(37495186-37495239)
chr5 (142-199)||(38684335-38684392)
chr5 (142-194)||(41351116-41351168)
chr5 (142-209)||(7085638-7085705)
chr5 (142-209)||(13108462-13108529)
chr5 (146-209)||(31287962-31288025)
chr5 (142-196)||(5067392-5067446)
chr5 (149-211)||(15485310-15485372)
chr5 (142-192)||(21377261-21377311)
chr5 (142-192)||(27487566-27487616)
chr5 (142-211)||(6014292-6014361)
chr5 (142-211)||(22392804-22392873)
chr5 (142-197)||(13659257-13659312)
chr5 (142-209)||(21236374-21236441)
chr5 (145-211)||(9659326-9659392)
chr5 (145-211)||(12398463-12398529)
chr5 (142-192)||(24158178-24158228)
chr5 (142-191)||(25750625-25750674)
chr5 (142-198)||(930498-930554)
chr5 (148-196)||(10813869-10813917)
chr5 (144-196)||(42193614-42193666)
[»] scaffold0016 (1 HSPs)
scaffold0016 (148-211)||(32404-32467)
[»] chr4 (37 HSPs)
chr4 (142-209)||(9517653-9517720)
chr4 (142-199)||(27528807-27528864)
chr4 (142-211)||(33696291-33696360)
chr4 (142-211)||(34723915-34723984)
chr4 (142-211)||(34844770-34844839)
chr4 (142-211)||(40058864-40058933)
chr4 (142-211)||(52983735-52983804)
chr4 (146-211)||(54127358-54127423)
chr4 (142-209)||(32986315-32986382)
chr4 (142-211)||(5609214-5609283)
chr4 (143-211)||(32990551-32990619)
chr4 (142-211)||(13771494-13771563)
chr4 (142-199)||(19660544-19660601)
chr4 (142-211)||(27574434-27574503)
chr4 (142-210)||(46714510-46714578)
chr4 (144-195)||(49287989-49288040)
chr4 (142-196)||(55158355-55158409)
chr4 (142-211)||(20077996-20078065)
chr4 (142-211)||(20566466-20566535)
chr4 (142-199)||(45787716-45787773)
chr4 (142-198)||(4064989-4065045)
chr4 (144-211)||(4912042-4912109)
chr4 (166-209)||(22625097-22625140)
chr4 (142-193)||(23639758-23639809)
chr4 (142-193)||(23645416-23645467)
chr4 (142-209)||(44343632-44343699)
chr4 (143-197)||(13017843-13017897)
chr4 (143-197)||(34835660-34835713)
chr4 (53-95)||(47442306-47442348)
chr4 (142-211)||(51535736-51535806)
chr4 (142-192)||(52494623-52494673)
chr4 (142-211)||(22488040-22488109)
chr4 (142-191)||(33289190-33289239)
chr4 (142-206)||(9978521-9978585)
chr4 (143-211)||(40252405-40252473)
chr4 (142-198)||(43719099-43719155)
chr4 (143-211)||(53787070-53787138)
[»] scaffold0217 (1 HSPs)
scaffold0217 (142-211)||(7321-7390)
[»] scaffold0049 (1 HSPs)
scaffold0049 (142-211)||(66870-66939)
[»] chr8 (35 HSPs)
chr8 (142-211)||(2639423-2639492)
chr8 (142-211)||(4718765-4718834)
chr8 (142-211)||(21603350-21603419)
chr8 (142-211)||(2618306-2618375)
chr8 (142-211)||(8765538-8765607)
chr8 (142-211)||(34237667-34237736)
chr8 (142-211)||(39349376-39349445)
chr8 (143-211)||(18128633-18128701)
chr8 (143-211)||(26168862-26168930)
chr8 (146-196)||(24018518-24018568)
chr8 (21-93)||(2577991-2578061)
chr8 (142-211)||(3734635-3734704)
chr8 (142-191)||(14633094-14633143)
chr8 (142-211)||(15259418-15259487)
chr8 (142-211)||(28193594-28193663)
chr8 (142-192)||(16990722-16990772)
chr8 (145-199)||(32879411-32879465)
chr8 (142-211)||(20306028-20306097)
chr8 (142-211)||(21092661-21092730)
chr8 (50-95)||(30051670-30051715)
chr8 (143-211)||(10292174-10292242)
chr8 (142-209)||(28088408-28088475)
chr8 (145-211)||(4698738-4698804)
chr8 (149-211)||(12312966-12313027)
chr8 (142-196)||(42643130-42643184)
chr8 (142-199)||(264412-264469)
chr8 (142-199)||(651452-651509)
chr8 (142-199)||(837187-837244)
chr8 (142-211)||(28908943-28909012)
chr8 (142-211)||(34610699-34610768)
chr8 (142-211)||(42328124-42328193)
chr8 (142-178)||(5740395-5740431)
chr8 (143-199)||(6953021-6953076)
chr8 (155-199)||(25248479-25248523)
chr8 (143-211)||(28964153-28964220)
[»] chr7 (38 HSPs)
chr7 (142-199)||(654717-654774)
chr7 (142-211)||(21835271-21835340)
chr7 (142-211)||(22120008-22120077)
chr7 (142-211)||(28089940-28090008)
chr7 (142-211)||(40542922-40542991)
chr7 (142-211)||(2751391-2751460)
chr7 (142-211)||(3851877-3851946)
chr7 (142-199)||(7275409-7275466)
chr7 (142-211)||(17196962-17197031)
chr7 (142-197)||(7175874-7175929)
chr7 (142-197)||(8943413-8943468)
chr7 (142-208)||(43785311-43785377)
chr7 (142-211)||(2344419-2344488)
chr7 (142-199)||(11997981-11998038)
chr7 (142-211)||(18044227-18044296)
chr7 (142-199)||(21574114-21574171)
chr7 (142-211)||(22703606-22703675)
chr7 (142-211)||(41907526-41907594)
chr7 (142-198)||(27312285-27312341)
chr7 (142-210)||(31197711-31197779)
chr7 (148-211)||(10091308-10091371)
chr7 (142-197)||(25333537-25333592)
chr7 (142-193)||(31712914-31712965)
chr7 (142-211)||(16374114-16374183)
chr7 (144-197)||(17212187-17212240)
chr7 (142-211)||(23092216-23092285)
chr7 (142-211)||(29861790-29861859)
chr7 (142-211)||(42913525-42913594)
chr7 (155-211)||(2103175-2103230)
chr7 (156-211)||(23012534-23012589)
chr7 (148-211)||(27704122-27704184)
chr7 (142-211)||(22638408-22638477)
chr7 (53-98)||(48433375-48433420)
chr7 (55-95)||(12270284-12270324)
chr7 (142-210)||(21217845-21217913)
chr7 (155-211)||(21373830-21373886)
chr7 (146-194)||(31274050-31274098)
chr7 (142-210)||(33137837-33137904)
[»] chr3 (43 HSPs)
chr3 (142-211)||(8097291-8097360)
chr3 (142-211)||(26174229-26174298)
chr3 (142-211)||(30257740-30257809)
chr3 (142-211)||(32151540-32151609)
chr3 (142-211)||(39041864-39041933)
chr3 (142-211)||(46576464-46576533)
chr3 (144-211)||(54475797-54475864)
chr3 (145-211)||(35493027-35493093)
chr3 (142-211)||(10190754-10190823)
chr3 (142-211)||(18176899-18176968)
chr3 (142-211)||(25379877-25379946)
chr3 (142-211)||(40133461-40133530)
chr3 (142-211)||(48977504-48977573)
chr3 (142-211)||(49258274-49258343)
chr3 (142-197)||(53848446-53848501)
chr3 (142-211)||(8456162-8456231)
chr3 (142-211)||(10083831-10083900)
chr3 (142-199)||(15566512-15566569)
chr3 (142-211)||(45272428-45272497)
chr3 (142-199)||(48105005-48105062)
chr3 (142-199)||(53424189-53424246)
chr3 (142-198)||(26158940-26158996)
chr3 (142-210)||(33398480-33398548)
chr3 (147-211)||(34844494-34844557)
chr3 (145-209)||(52455664-52455728)
chr3 (142-193)||(24407395-24407446)
chr3 (148-211)||(45529772-45529835)
chr3 (144-211)||(49167175-49167242)
chr3 (148-199)||(53233928-53233979)
chr3 (142-196)||(24165727-24165781)
chr3 (142-196)||(52821648-52821702)
chr3 (144-197)||(6041684-6041737)
chr3 (144-205)||(8958049-8958110)
chr3 (142-211)||(21363059-21363128)
chr3 (142-211)||(25289727-25289795)
chr3 (142-211)||(31537850-31537919)
chr3 (148-209)||(51532907-51532968)
chr3 (142-199)||(55371306-55371363)
chr3 (143-194)||(17579148-17579199)
chr3 (142-209)||(32094769-32094836)
chr3 (152-190)||(51390155-51390193)
chr3 (143-196)||(25017620-25017672)
chr3 (142-211)||(33698718-33698787)
[»] chr1 (32 HSPs)
chr1 (142-211)||(7197259-7197328)
chr1 (142-211)||(34778455-34778524)
chr1 (142-211)||(4621249-4621318)
chr1 (142-211)||(15059414-15059483)
chr1 (142-211)||(24122139-24122208)
chr1 (142-211)||(24674509-24674578)
chr1 (146-211)||(30677292-30677357)
chr1 (142-211)||(32729660-32729729)
chr1 (142-209)||(7766739-7766806)
chr1 (142-211)||(8254764-8254833)
chr1 (142-211)||(17935885-17935954)
chr1 (142-199)||(37351465-37351522)
chr1 (142-191)||(40145893-40145942)
chr1 (143-199)||(16899631-16899687)
chr1 (142-197)||(27454876-27454931)
chr1 (142-197)||(46607940-46607995)
chr1 (142-199)||(1379025-1379082)
chr1 (142-211)||(9500367-9500436)
chr1 (143-196)||(40802082-40802135)
chr1 (142-199)||(45859055-45859112)
chr1 (142-211)||(48699875-48699944)
chr1 (166-210)||(7946961-7947004)
chr1 (142-210)||(8779748-8779816)
chr1 (143-199)||(26513161-26513217)
chr1 (142-209)||(7578527-7578594)
chr1 (142-197)||(23734247-23734302)
chr1 (142-197)||(23741439-23741494)
chr1 (142-197)||(35138118-35138173)
chr1 (169-211)||(23232300-23232342)
chr1 (150-211)||(2537809-2537870)
chr1 (142-198)||(22910000-22910056)
chr1 (154-210)||(37047109-37047165)
[»] scaffold0102 (1 HSPs)
scaffold0102 (144-211)||(39208-39275)
[»] scaffold0019 (1 HSPs)
scaffold0019 (144-211)||(161925-161992)
[»] scaffold0028 (1 HSPs)
scaffold0028 (144-194)||(27903-27953)
[»] scaffold0576 (1 HSPs)
scaffold0576 (142-211)||(5094-5163)
[»] scaffold1175 (1 HSPs)
scaffold1175 (142-211)||(2438-2507)
[»] scaffold0070 (1 HSPs)
scaffold0070 (142-211)||(40441-40509)
[»] scaffold0623 (1 HSPs)
scaffold0623 (148-211)||(1074-1137)
[»] scaffold0366 (1 HSPs)
scaffold0366 (148-211)||(9317-9380)
[»] scaffold0018 (1 HSPs)
scaffold0018 (36-88)||(70202-70254)
[»] scaffold0328 (1 HSPs)
scaffold0328 (142-211)||(15107-15175)


Alignment Details
Target: chr2 (Bit Score: 92; Significance: 7e-45; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 9 - 108
Target Start/End: Original strand, 19525331 - 19525430
Alignment:
Q  9 agcaccacagacaacctataagctaatctatataatcgactaatctcaaaataattcaagattcgagtcataaatcaaatgataaaaaagtggttgtcta 108  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19525331 agcaacacagacaacctataagctaatctatataatcaactaatctcaaaataattcaagattcgagtcataaatcaaatgataaaaaagtggttgtcta 19525430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 19525428 - 19525481
Alignment:
Q  158 ctaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19525428 ctaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 19525481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 3943925 - 3943856
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||| | |||||||||    
T  3943925 ccgatccaataaccgactaatccaaggggaccaatcccaccacccacttgcgggagccccgtttaaagcc 3943856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 146 - 211
Target Start/End: Complemental strand, 41330023 - 41329958
Alignment:
Q  146 tccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    ||||||||||||||||||  ||||||||||||||||| |||||||| ||||||| |||||||||||    
T  41330023 tccaagaaccgactaatctgaggggaccaatctcaccgcccacttgtgggggccccatttaaagcc 41329958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 11941222 - 11941291
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| |||||||||||| |||| |||||||||||||| | | |||||||||    
T  11941222 ccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggtcccgtttaaagcc 11941291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 31778216 - 31778147
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    ||||||||||||| ||||||||  || ||||||||||||||  ||||||||||||||| |||||||||||    
T  31778216 ccgatccaagaactgactaatctgagaggaccaatctcaccgtccacttgcgggggccccatttaaagcc 31778147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 33827585 - 33827654
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| ||||||||||||||||||||||| |||| ||||||||| |||| | | |||||||||    
T  33827585 ccgatccaagaatcgactaatccaaggggaccaatcccaccgcccacttgcaggggtcccgtttaaagcc 33827654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 35171985 - 35171916
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    ||||| |||||| |||||||||| |||||||||||| |||| |||||||||||||||| | |||||||||    
T  35171985 ccgattcaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagcc 35171916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 44946065 - 44946134
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| |||||||||||| |||| |||||||||||||| | | |||||||||    
T  44946065 ccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggggcccgtttaaagcc 44946134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 44610220 - 44610156
Alignment:
Q  146 tccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagc 210  Q
    ||||||||||||||||||| | |||||||||| |||| ||||||||| |||||| ||||||||||    
T  44610220 tccaagaaccgactaatccgatgggaccaatcccaccgcccacttgcaggggccccatttaaagc 44610156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 14487010 - 14486953
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcc 199  Q
    |||||||||| |||||||||||| |||||||||||| |||| ||||||||| ||||||    
T  14487010 ccgatccaaggaccgactaatccgaggggaccaatcccaccgcccacttgcaggggcc 14486953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 15038144 - 15038075
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||  |||||||||||| |||| |||||||||||||||  | |||||||||    
T  15038144 ccgatccaagaatcgactaatctgaggggaccaatcccaccgcccacttgcgggggctccgtttaaagcc 15038075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 28669058 - 28668989
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    ||||||||| || |||||||||| |||||||||||| |||| |||||||| ||||||| | |||||||||    
T  28669058 ccgatccaaaaatcgactaatccgaggggaccaatcccaccgcccacttgtgggggccccgtttaaagcc 28668989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 34516426 - 34516483
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcc 199  Q
    |||||||||||| |||||||||| |||||||||||| |||| ||||||||| ||||||    
T  34516426 ccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcaggggcc 34516483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 36242324 - 36242393
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| ||| |||||| |||||||||||| |||| ||||||||||||| || | |||||||||    
T  36242324 ccgatccaagaatcgattaatccgaggggaccaatcccaccgcccacttgcggggaccccgtttaaagcc 36242393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 10953494 - 10953538
Alignment:
Q  53 ctcaaaataattcaagattcgagtcataaatcaaatgataaaaaa 97  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||    
T  10953494 ctcaaaataattcaagattcaagtcataaatcaaatgagaaaaaa 10953538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 197
Target Start/End: Original strand, 2140498 - 2140553
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcggggg 197  Q
    ||||||||| || |||||||||| |||||||||||| |||| ||||||||||||||    
T  2140498 ccgatccaataatcgactaatccgaggggaccaatcccaccgcccacttgcggggg 2140553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 197
Target Start/End: Complemental strand, 25293344 - 25293289
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcggggg 197  Q
    |||||||||||| |||||||||| |||||||||||| || | ||||||||||||||    
T  25293344 ccgatccaagaatcgactaatccgaggggaccaatcccatcgcccacttgcggggg 25293289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 197
Target Start/End: Original strand, 44929858 - 44929913
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcggggg 197  Q
    |||||||||||| |||||||| |||||||||||||| ||||  |||||||||||||    
T  44929858 ccgatccaagaatcgactaattcaaggggaccaatcccaccgtccacttgcggggg 44929913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 18976467 - 18976521
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggg 196  Q
    |||||||||||| |||||||| | |||||||||||| |||| |||||||||||||    
T  18976467 ccgatccaagaatcgactaattcgaggggaccaatcccaccgcccacttgcgggg 18976521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 12543328 - 12543271
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcc 199  Q
    ||||| |||| |||||||||| |||||||| ||||| ||||| |||||||||||||||    
T  12543328 ccgattcaaggaccgactaattcaaggggagcaatcccaccatccacttgcgggggcc 12543271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 197
Target Start/End: Complemental strand, 19054209 - 19054156
Alignment:
Q  144 gatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcggggg 197  Q
    |||||||||| |||||||||| || ||||||||| |||| ||||||||||||||    
T  19054209 gatccaagaatcgactaatccgagcggaccaatcccaccgcccacttgcggggg 19054156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 30466842 - 30466899
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcc 199  Q
    |||||||||||| |||||||||| | |||||||||| |||  ||||||||||||||||    
T  30466842 ccgatccaagaatcgactaatccgaagggaccaatcccactgcccacttgcgggggcc 30466899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 26521219 - 26521164
Alignment:
Q  59 ataattcaagattcgagtcataaatcaaatgataaaaaagtggttgtctatacaaagtt 117  Q
    |||||||||||||| ||||||||||||||||   ||||||||||  |||||||||||||    
T  26521219 ataattcaagattcaagtcataaatcaaatg---aaaaagtggtaatctatacaaagtt 26521164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 198
Target Start/End: Original strand, 43374342 - 43374398
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggc 198  Q
    |||||||||||| |||||||||| | |||||||||| |||| | |||||||||||||    
T  43374342 ccgatccaagaatcgactaatccgaagggaccaatcccaccgctcacttgcgggggc 43374398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 209
Target Start/End: Complemental strand, 5394202 - 5394135
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaag 209  Q
    |||||| ||| |||||||||||| |  ||||||||| |||| ||||||||||| |||| |||||||||    
T  5394202 ccgatctaaggaccgactaatccgaacggaccaatcccaccgcccacttgcggcggccccatttaaag 5394135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 193
Target Start/End: Original strand, 8192364 - 8192415
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcg 193  Q
    |||||||||| |||||||||||| ||||| |||||| |||| ||||||||||    
T  8192364 ccgatccaaggaccgactaatccgaggggcccaatcccaccgcccacttgcg 8192415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 197
Target Start/End: Complemental strand, 18692145 - 18692090
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcggggg 197  Q
    |||||||||||| |||||||| | |||||||||||| |||| |||||||| |||||    
T  18692145 ccgatccaagaatcgactaatacgaggggaccaatcccaccgcccacttgtggggg 18692090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 27269359 - 27269409
Alignment:
Q  145 atccaagaaccgactaatccaaggggaccaatctcaccacccacttgcggg 195  Q
    ||||||||| |||||||||| |||||| ||||| |||| ||||||||||||    
T  27269359 atccaagaatcgactaatccgaggggatcaatcccaccgcccacttgcggg 27269409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 9400973 - 9401030
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcc 199  Q
    |||||||||||| ||||||||| ||||  ||||||| |||  ||||||||||||||||    
T  9400973 ccgatccaagaatcgactaatctaaggaaaccaatcccactgcccacttgcgggggcc 9401030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 138 - 199
Target Start/End: Complemental strand, 19850022 - 19849961
Alignment:
Q  138 agtaccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcc 199  Q
    |||| ||||||||||| ||| ||||   || |||||||||||||| ||||||||||||||||    
T  19850022 agtatcgatccaagaatcgattaatttgagaggaccaatctcaccgcccacttgcgggggcc 19849961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 196
Target Start/End: Complemental strand, 24196174 - 24196133
Alignment:
Q  155 cgactaatccaaggggaccaatctcaccacccacttgcgggg 196  Q
    |||||||||| |||||||||||| |||| |||||||||||||    
T  24196174 cgactaatccgaggggaccaatcccaccgcccacttgcgggg 24196133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 89
Target Start/End: Complemental strand, 34554002 - 34553966
Alignment:
Q  53 ctcaaaataattcaagattcgagtcataaatcaaatg 89  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  34554002 ctcaaaataattcaaaattctagtcataaatcaaatg 34553966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 8e-20; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 9239160 - 9239091
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| |||||||||||| |||| |||||||||||||||| |||||||||||    
T  9239160 ccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccatttaaagcc 9239091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 117
Target Start/End: Original strand, 5964278 - 5964348
Alignment:
Q  47 actaatctcaaaataattcaagattcgagtcataaatcaaatgataaaaaagtggttgtctatacaaagtt 117  Q
    |||||||||||||||||  ||||||| | |||||||||||||||||||||||||| ||| |||||| ||||    
T  5964278 actaatctcaaaataatgtaagattcaactcataaatcaaatgataaaaaagtggctgtttatacatagtt 5964348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 1345120 - 1345051
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||| | | |||||||||    
T  1345120 ccgatccaagaatcgactaatccaaggggaccaatcccaccgtccacttgcggggggcccgtttaaagcc 1345051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 9844123 - 9844054
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| | ||||||||||||||| |||||||| ||||||| | |||||||||    
T  9844123 ccgatccaagaatcgactaatccgaagggaccaatctcaccgcccacttgagggggccccgtttaaagcc 9844054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 11449056 - 11448987
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    ||||| |||||| |||||||||| |||||||||||| |||| |||||||||||||||| | |||||||||    
T  11449056 ccgattcaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagcc 11448987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 15360110 - 15360179
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| |||||||||||| |||| |||| ||||||||||| | |||||||||    
T  15360110 ccgatccaagaatcgactaatccgaggggaccaatcccaccgcccatttgcgggggccccgtttaaagcc 15360179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 34147531 - 34147462
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| |||||||||||| |||| |||||||||||||| | | |||||||||    
T  34147531 ccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggggcccgtttaaagcc 34147462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 34160147 - 34160078
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| |||||||||||| |||| |||||||||||||| | | |||||||||    
T  34160147 ccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggggcccgtttaaagcc 34160078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 210
Target Start/End: Complemental strand, 14213067 - 14212999
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagc 210  Q
    |||||||||||| |||||||||| || ||||||||| |||||||||||||||||| || | ||||||||    
T  14213067 ccgatccaagaatcgactaatccgagtggaccaatcccaccacccacttgcggggcccccgtttaaagc 14212999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 3222648 - 3222702
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggg 196  Q
    |||||||||||| |||||||||| |||||||||||| |||| |||||||||||||    
T  3222648 ccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggg 3222702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 654158 - 654227
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    ||||||||| || |||||||||| |||||||||||| |||| |||||||||||| ||| | |||||||||    
T  654158 ccgatccaataatcgactaatccgaggggaccaatcccaccgcccacttgcgggagccccgtttaaagcc 654227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 21982333 - 21982401
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| |||| ||||||| |||| |||||||||||||||| | |||||||||    
T  21982333 ccgatccaagaatcgactaatccgaggg-accaatcccaccgcccacttgcgggggccccgtttaaagcc 21982401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 211
Target Start/End: Complemental strand, 9208435 - 9208368
Alignment:
Q  144 gatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||| |||||| ||  ||| |||||||| |||| |||||||||||||||| |||||||||||    
T  9208435 gatccaagaatcgactattctgaggagaccaatcccaccgcccacttgcgggggccccatttaaagcc 9208368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 211
Target Start/End: Complemental strand, 28672250 - 28672183
Alignment:
Q  144 gatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||| |||||||||| |||||||||||| |||| |||||||||| ||| | | |||||||||    
T  28672250 gatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgaggggcccgtttaaagcc 28672183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 143 - 209
Target Start/End: Original strand, 17081067 - 17081133
Alignment:
Q  143 cgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaag 209  Q
    ||||||||||| | ||| || | |||||||||||| |||| |||||||||||||||| |||||||||    
T  17081067 cgatccaagaaacaacttattcgaggggaccaatcccaccgcccacttgcgggggccccatttaaag 17081133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 21148523 - 21148577
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggg 196  Q
    ||||| |||||| |||||||||| |||||||||||| |||| |||||||||||||    
T  21148523 ccgattcaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggg 21148577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 11007350 - 11007293
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcc 199  Q
    |||||| ||||| |||||||||| ||||| |||||| |||| ||||||||||||||||    
T  11007350 ccgatcaaagaatcgactaatccgagggggccaatcccaccgcccacttgcgggggcc 11007293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 12390597 - 12390553
Alignment:
Q  155 cgactaatccaaggggaccaatctcaccacccacttgcgggggcc 199  Q
    |||||||||| |||||||||||| |||| ||||||||||||||||    
T  12390597 cgactaatccgaggggaccaatcccaccgcccacttgcgggggcc 12390553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 88
Target Start/End: Original strand, 4433100 - 4433135
Alignment:
Q  53 ctcaaaataattcaagattcgagtcataaatcaaat 88  Q
    |||||||||||||||||||| |||||||||||||||    
T  4433100 ctcaaaataattcaagattcaagtcataaatcaaat 4433135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 17149474 - 17149537
Alignment:
Q  148 caagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||| |||||||||| | |||||||||||| ||||   |||||||||||||| |||||||||||    
T  17149474 caaggaccgactaattcgaggggaccaatcccaccgttcacttgcgggggccccatttaaagcc 17149537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 9690650 - 9690719
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| || ||||||||| ||||  ||||||| | ||||| | |||||||||    
T  9690650 ccgatccaagaatcgactaatccgagaggaccaatcccaccgtccacttgtgagggccccgtttaaagcc 9690719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 8e-20; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 10869577 - 10869646
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    ||||||||||||||||||||||| |||||||||||| |||| ||||||||||| |||| |||||||||||    
T  10869577 ccgatccaagaaccgactaatccgaggggaccaatcccaccgcccacttgcggaggccccatttaaagcc 10869646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 18207392 - 18207323
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| |||||||||||| |||| |||||||||||||||||| |||||||||    
T  18207392 ccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggcctcgtttaaagcc 18207323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 8484673 - 8484742
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| |||||||||||| |||| |||||||||||||||| | |||||||||    
T  8484673 ccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagcc 8484742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 27498743 - 27498812
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| |||||||||||| |||| |||||||||||||||| | |||||||||    
T  27498743 ccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagcc 27498812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 32059452 - 32059521
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||| |||||||||||| |||||||||||| |||| |||||||||||||||| | |||||||||    
T  32059452 ccgatccaaggaccgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagcc 32059521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 142 - 197
Target Start/End: Original strand, 11926513 - 11926568
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcggggg 197  Q
    |||||||||||| |||||||||| |||||||||||| |||||||||||||||||||    
T  11926513 ccgatccaagaatcgactaatccgaggggaccaatcccaccacccacttgcggggg 11926568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 208
Target Start/End: Complemental strand, 22693120 - 22693054
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaa 208  Q
    |||||||||||| |||||||||| |||||||||||| |||| |||||||||||||||| | ||||||    
T  22693120 ccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaa 22693054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 19145424 - 19145492
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||||| |||||||| |||||||||||| |||| |||||||||||||| | |||||||||||    
T  19145424 ccgatccaagaaccaactaatccgaggggaccaatcccaccgcccacttgcgggggac-catttaaagcc 19145492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 30486013 - 30485944
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    ||||||||||||  ||||||||| |||||||||||| |||| ||||||||||||||| || |||||||||    
T  30486013 ccgatccaagaattgactaatccgaggggaccaatcccaccgcccacttgcgggggcatcgtttaaagcc 30485944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 35425198 - 35425129
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| || ||||||||| |||| |||||||||||||||| | |||||||||    
T  35425198 ccgatccaagaatcgactaatccgagaggaccaatcccaccgcccacttgcgggggccccgtttaaagcc 35425129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 211
Target Start/End: Original strand, 26009277 - 26009345
Alignment:
Q  143 cgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||| ||||||||||||||||| ||||||| |||| ||| ||||||||||||||||| | |||||||||    
T  26009277 cgattcaagaaccgactaatccgaggggactaatcccactacccacttgcgggggccccgtttaaagcc 26009345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 15641123 - 15641186
Alignment:
Q  148 caagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||| |||||||||| |||||||||||| |||| |||||||||||||||| | |||||||||    
T  15641123 caagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagcc 15641186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 47 - 117
Target Start/End: Complemental strand, 39646499 - 39646428
Alignment:
Q  47 actaatctcaaaataattcaagattcgagtcataaatcaaatgataa-aaaagtggttgtctatacaaagtt 117  Q
    |||||||||||||| ||||||||||  |||| ||||||||||||||| |||||||| || ||||||||||||    
T  39646499 actaatctcaaaatgattcaagattgaagtcttaaatcaaatgataaaaaaagtggctggctatacaaagtt 39646428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 11464920 - 11464974
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggg 196  Q
    |||||||||||| |||||||| | |||||||||||| ||||||||||||||||||    
T  11464920 ccgatccaagaatcgactaattcgaggggaccaatcccaccacccacttgcgggg 11464974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 19456223 - 19456277
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggg 196  Q
    |||||||||||| |||||||||| |||||||||||| |||| |||||||||||||    
T  19456223 ccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggg 19456277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 200
Target Start/End: Original strand, 38630991 - 38631049
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcct 200  Q
    |||||||||||| ||| |||||| |||||||||||| |||| |||||||||||||||||    
T  38630991 ccgatccaagaatcgattaatccgaggggaccaatcccaccgcccacttgcgggggcct 38631049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 4603962 - 4603893
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||| |||||||||||| |||||||||||| ||||  |||||||| |||||| | |||||||||    
T  4603962 ccgatccaaggaccgactaatccgaggggaccaatcccaccgtccacttgcaggggccccgtttaaagcc 4603893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 13038467 - 13038536
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||| | |||||| ||||| |||| |||||||||||||||| | |||||||||    
T  13038467 ccgatccaagaatcgactaattcgaggggatcaatcccaccgcccacttgcgggggccccgtttaaagcc 13038536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 33709515 - 33709584
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| |||||||||||| |||| |||||||| ||||| | | |||||||||    
T  33709515 ccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgtgggggtcccgtttaaagcc 33709584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 195
Target Start/End: Complemental strand, 37495239 - 37495186
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcggg 195  Q
    |||||||||||| |||||||||| |||||||||||| |||| ||||||||||||    
T  37495239 ccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggg 37495186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 38684392 - 38684335
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcc 199  Q
    |||||||||||| |||||||||| |||||||||||| |||| | ||||||||||||||    
T  38684392 ccgatccaagaatcgactaatccgaggggaccaatcccaccgctcacttgcgggggcc 38684335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 41351116 - 41351168
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgg 194  Q
    |||||||||||| |||||||||| |||||||||||| |||| |||||||||||    
T  41351116 ccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgg 41351168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 209
Target Start/End: Original strand, 7085638 - 7085705
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaag 209  Q
    ||||| |||||| |||||||||| |||||||||||| |||| ||||||||||||| || | |||||||    
T  7085638 ccgattcaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggaccccgtttaaag 7085705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 209
Target Start/End: Original strand, 13108462 - 13108529
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaag 209  Q
    |||||||||||| |||||||| | |||||| ||||| |||| |||||||||||||||| | |||||||    
T  13108462 ccgatccaagaatcgactaattcgaggggatcaatcccaccgcccacttgcgggggccccgtttaaag 13108529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 31287962 - 31288025
Alignment:
Q  146 tccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaag 209  Q
    ||||||||||||||||| | ||| |||||||| |||| |||||||||||||||| | |||||||    
T  31287962 tccaagaaccgactaattcgaggagaccaatcccaccgcccacttgcgggggccccgtttaaag 31288025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 142 - 196
Target Start/End: Complemental strand, 5067446 - 5067392
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggg 196  Q
    |||||||||||| |||||||||  |||||||||||| |||| |||||||||||||    
T  5067446 ccgatccaagaatcgactaatcagaggggaccaatcccaccgcccacttgcgggg 5067392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 149 - 211
Target Start/End: Original strand, 15485310 - 15485372
Alignment:
Q  149 aagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||| ||||||||||| ||||| |||||| ||||| |||||||||||| || |||||||||||    
T  15485310 aagagccgactaatccgaggggtccaatcccaccatccacttgcggggaccccatttaaagcc 15485372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 142 - 192
Target Start/End: Original strand, 21377261 - 21377311
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgc 192  Q
    |||||||||  |||||||||||||| | |||||||||||||||||||||||    
T  21377261 ccgatccaaagaccgactaatccaaagagaccaatctcaccacccacttgc 21377311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 142 - 192
Target Start/End: Original strand, 27487566 - 27487616
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgc 192  Q
    |||||||||||| |||||||||| |||||||||||| |||| |||||||||    
T  27487566 ccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgc 27487616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 6014292 - 6014361
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||| | ||||||| ||||||||| |||||||||| || || | |||||||||    
T  6014292 ccgatccaagaatcgactaattcgaggggactaatctcaccgcccacttgcgtggaccccgtttaaagcc 6014361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 22392873 - 22392804
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    ||||||||| || |||||||||  |||||||||||  |||| |||||||||||||||| | |||||||||    
T  22392873 ccgatccaaaaatcgactaatctgaggggaccaattccaccgcccacttgcgggggccccgtttaaagcc 22392804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 197
Target Start/End: Original strand, 13659257 - 13659312
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcggggg 197  Q
    |||||||||||| ||| |||||| |||||| ||||| |||| ||||||||||||||    
T  13659257 ccgatccaagaatcgattaatccgaggggatcaatcccaccgcccacttgcggggg 13659312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 209
Target Start/End: Original strand, 21236374 - 21236441
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaag 209  Q
    ||||| |||||| |||||||||  ||||||| |||| |||| |||||||||||||||| | |||||||    
T  21236374 ccgattcaagaatcgactaatctgaggggactaatcccaccgcccacttgcgggggccccgtttaaag 21236441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 211
Target Start/End: Original strand, 9659326 - 9659392
Alignment:
Q  145 atccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    ||||||||| | |||||||| | |||||||||| ||||  ||||||||||||| | |||||||||||    
T  9659326 atccaagaatcaactaatccgaagggaccaatcccaccgtccacttgcggggggcccatttaaagcc 9659392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 211
Target Start/End: Original strand, 12398463 - 12398529
Alignment:
Q  145 atccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    ||||||||||||||||||   || ||| ||||||||||  ||| ||||||||||| |||||||||||    
T  12398463 atccaagaaccgactaatttgagaggatcaatctcaccgtccatttgcgggggccccatttaaagcc 12398529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 192
Target Start/End: Original strand, 24158178 - 24158228
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgc 192  Q
    ||||| |||| |||||||||||  ||||||||||||||||| |||||||||    
T  24158178 ccgattcaaggaccgactaatctgaggggaccaatctcaccgcccacttgc 24158228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 25750625 - 25750674
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttg 191  Q
    |||||||||||| |||||||||  | ||||||||||||||| ||||||||    
T  25750625 ccgatccaagaatcgactaatctgaagggaccaatctcaccccccacttg 25750674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 198
Target Start/End: Original strand, 930498 - 930554
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggc 198  Q
    |||||||||| |||||||||||| |||||||||||| |||   ||||||||| ||||    
T  930498 ccgatccaaggaccgactaatccgaggggaccaatcacactgtccacttgcgagggc 930554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 196
Target Start/End: Original strand, 10813869 - 10813917
Alignment:
Q  148 caagaaccgactaatccaaggggaccaatctcaccacccacttgcgggg 196  Q
    ||||||| ||||||||||||||||| |||| ||||||| ||||| ||||    
T  10813869 caagaactgactaatccaaggggacaaatcccaccacctacttgtgggg 10813917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 42193666 - 42193614
Alignment:
Q  144 gatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggg 196  Q
    |||||||||| |||||||||| || ||||||| | |||| |||||||||||||    
T  42193666 gatccaagaatcgactaatccgagaggaccaaccccaccgcccacttgcgggg 42193614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 148 - 211
Target Start/End: Complemental strand, 32467 - 32404
Alignment:
Q  148 caagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||| |||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||    
T  32467 caagaatcgactaatccgaggggaccaatcccaccacccacttgcgggggccacatttaaagcc 32404  T

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Target: chr4 (Bit Score: 48; Significance: 1e-18; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 142 - 209
Target Start/End: Original strand, 9517653 - 9517720
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaag 209  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||| | |||||||    
T  9517653 ccgatccaagaatcgactaatccgaggggaccaatctcaccacccacctgcgggggccccgtttaaag 9517720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 27528807 - 27528864
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcc 199  Q
    |||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||    
T  27528807 ccgatccaagaatcgactaatccgaggggaccaatctcaccgcccacttgcgggggcc 27528864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 33696291 - 33696360
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    ||||||||||||  ||||||||| || |||||||||||||| |||||||||||||||| |||||||||||    
T  33696291 ccgatccaagaattgactaatccgagaggaccaatctcaccgcccacttgcgggggccccatttaaagcc 33696360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 34723984 - 34723915
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| || ||||||||| ||||||||||||||||||||| | |||||||||    
T  34723984 ccgatccaagaatcgactaatccgagaggaccaatcccaccacccacttgcgggggccccgtttaaagcc 34723915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 34844770 - 34844839
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| |||||||||||| |||| |||||||||||||||| | |||||||||    
T  34844770 ccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagcc 34844839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 40058864 - 40058933
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| |||||||||||| |||| |||||||||||||||| | |||||||||    
T  40058864 ccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagcc 40058933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 52983804 - 52983735
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| |||||||||||| |||| |||||||||||||||| | |||||||||    
T  52983804 ccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagcc 52983735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 146 - 211
Target Start/End: Original strand, 54127358 - 54127423
Alignment:
Q  146 tccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    ||||||||||||||||||| |||||||||||| |||| |||||||||||||||| | |||||||||    
T  54127358 tccaagaaccgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagcc 54127423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 142 - 209
Target Start/End: Complemental strand, 32986382 - 32986315
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaag 209  Q
    |||||||||||| |||||| ||| |||||||||||| |||| |||||||||||||||| |||||||||    
T  32986382 ccgatccaagaatcgactattccgaggggaccaatcccaccgcccacttgcgggggccccatttaaag 32986315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 5609214 - 5609283
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| |||||| ||||| ||||  ||||||||||||||| |||||||||||    
T  5609214 ccgatccaagaatcgactaatccgaggggatcaatcccaccgtccacttgcgggggccccatttaaagcc 5609283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 32990619 - 32990551
Alignment:
Q  143 cgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    ||||||||||| |||||| ||| |||||||||||| |||| |||||||||||||||| | |||||||||    
T  32990619 cgatccaagaatcgactagtccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagcc 32990551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 13771494 - 13771563
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||||||||||||   ||||||||||||||| || ||||||||||| ||| | |||||||||    
T  13771494 ccgatccaagaaccgactaattataggggaccaatctcatcatccacttgcgggagccccgtttaaagcc 13771563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 19660544 - 19660601
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcc 199  Q
    |||||||||||| |||||||||| |||||| ||||| |||| ||||||||||||||||    
T  19660544 ccgatccaagaatcgactaatccgaggggatcaatcccaccgcccacttgcgggggcc 19660601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 27574503 - 27574434
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    ||||||||||||  || |||||| |||||||||| |||||| |||||||||||||||| | |||||||||    
T  27574503 ccgatccaagaattgattaatccgaggggaccaaactcaccgcccacttgcgggggccccttttaaagcc 27574434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 210
Target Start/End: Complemental strand, 46714578 - 46714510
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagc 210  Q
    ||||| ||||||  ||||||||| |||||||||||| |||| |||||||||||||||| | ||||||||    
T  46714578 ccgattcaagaattgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagc 46714510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 49288040 - 49287989
Alignment:
Q  144 gatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcggg 195  Q
    |||||||||| |||||||||| ||||||||||||||| | ||||||||||||    
T  49288040 gatccaagaatcgactaatccgaggggaccaatctcagcgcccacttgcggg 49287989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 55158355 - 55158409
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggg 196  Q
    ||||||||| || |||||||||| |||||||||||| ||||||||| ||||||||    
T  55158355 ccgatccaaaaatcgactaatccgaggggaccaatcccaccacccatttgcgggg 55158409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 20077996 - 20078065
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| |||| || |||| |||| ||||||| |||||||| | |||||||||    
T  20077996 ccgatccaagaatcgactaatccgagggaactaatcccaccgcccacttacgggggccccgtttaaagcc 20078065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 20566535 - 20566466
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||  |||||||||||| || | |||||||||||||||  | |||||||||    
T  20566535 ccgatccaagaatcgactaatctgaggggaccaatcccagcgcccacttgcgggggctccgtttaaagcc 20566466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 45787716 - 45787773
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcc 199  Q
    |||||||||||| |||||||| | |||||||||||| ||||  |||||||||||||||    
T  45787716 ccgatccaagaatcgactaattcgaggggaccaatcccaccgtccacttgcgggggcc 45787773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 198
Target Start/End: Complemental strand, 4065045 - 4064989
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggc 198  Q
    ||||||||| || |||||||||| |||||||||||| |||| |||||||| ||||||    
T  4065045 ccgatccaaaaatcgactaatccgaggggaccaatcccaccgcccacttgtgggggc 4064989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 211
Target Start/End: Complemental strand, 4912109 - 4912042
Alignment:
Q  144 gatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||| |||||||| |  ||||| ||||| ||||||||||||||||||||  | |||||||||    
T  4912109 gatccaagaatcgactaattcggggggatcaatcacaccacccacttgcgggggctccgtttaaagcc 4912042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 209
Target Start/End: Original strand, 22625097 - 22625140
Alignment:
Q  166 aggggaccaatctcaccacccacttgcgggggcctcatttaaag 209  Q
    |||||||||||| |||| |||||||||||||||| |||||||||    
T  22625097 aggggaccaatcccaccgcccacttgcgggggccccatttaaag 22625140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 193
Target Start/End: Complemental strand, 23639809 - 23639758
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcg 193  Q
    |||||||||||| |||||||||| |||||||||||| ||||  |||||||||    
T  23639809 ccgatccaagaatcgactaatccgaggggaccaatcccaccgtccacttgcg 23639758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 193
Target Start/End: Complemental strand, 23645467 - 23645416
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcg 193  Q
    |||||||||||| |||||||||| |||||||||||| ||||  |||||||||    
T  23645467 ccgatccaagaatcgactaatccgaggggaccaatcccaccgtccacttgcg 23645416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 209
Target Start/End: Complemental strand, 44343699 - 44343632
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaag 209  Q
    ||||| |||||| |||||||| | |||||||||||| |||| |||||||||||| ||| | |||||||    
T  44343699 ccgattcaagaatcgactaattcgaggggaccaatcccaccgcccacttgcgggagccccgtttaaag 44343632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 197
Target Start/End: Complemental strand, 13017897 - 13017843
Alignment:
Q  143 cgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcggggg 197  Q
    ||||||||| |||||||||||| || ||||||||| |||  ||||||||||||||    
T  13017897 cgatccaaggaccgactaatccgagtggaccaatcccactgcccacttgcggggg 13017843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 197
Target Start/End: Complemental strand, 34835713 - 34835660
Alignment:
Q  143 cgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcggggg 197  Q
    ||||| ||||| |||||||||| ||||||||||||||| | ||||||||||||||    
T  34835713 cgatctaagaatcgactaatccgaggggaccaatctca-cgcccacttgcggggg 34835660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 95
Target Start/End: Original strand, 47442306 - 47442348
Alignment:
Q  53 ctcaaaataattcaagattcgagtcataaatcaaatgataaaa 95  Q
    |||||||||||||||||||| ||| ||||||||||||| ||||    
T  47442306 ctcaaaataattcaagattcaagtaataaatcaaatgacaaaa 47442348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 51535806 - 51535736
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgc-gggggcctcatttaaagcc 211  Q
    |||||| ||||| |||||||| | |||||||||||| |||| ||||||||| ||||||| | |||||||||    
T  51535806 ccgatctaagaatcgactaattcgaggggaccaatcccaccgcccacttgctgggggccccgtttaaagcc 51535736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 192
Target Start/End: Complemental strand, 52494673 - 52494623
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgc 192  Q
    |||||||||||| |||||||| | |||||||||||| |||| |||||||||    
T  52494673 ccgatccaagaatcgactaattcgaggggaccaatcccaccgcccacttgc 52494623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 22488040 - 22488109
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||| ||||||||||   |||||| ||||| |||| |||| ||||||||||| | |||||||||    
T  22488040 ccgatccaaggaccgactaatttgaggggatcaatcccaccgcccatttgcgggggccccgtttaaagcc 22488109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 33289239 - 33289190
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttg 191  Q
    |||||||||||| |||||||||| ||||||| |||||||||  |||||||    
T  33289239 ccgatccaagaatcgactaatccgaggggactaatctcaccgtccacttg 33289190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 206
Target Start/End: Original strand, 9978521 - 9978585
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcattta 206  Q
    |||||| ||||| | |||||||| | |||||||||| |||| |||||||||||||| | ||||||    
T  9978521 ccgatctaagaatcaactaatccgatgggaccaatcccaccgcccacttgcgggggacccattta 9978585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 40252473 - 40252405
Alignment:
Q  143 cgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    ||||| || |||||||||||   ||| ||||||||||||| |||||||||||| | | |||||||||||    
T  40252473 cgatctaaaaaccgactaatttgaggagaccaatctcaccgcccacttgcgggtgacccatttaaagcc 40252405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 198
Target Start/End: Original strand, 43719099 - 43719155
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggc 198  Q
    |||||||||||| |||||||||| ||  |||||||| |||| ||||||| |||||||    
T  43719099 ccgatccaagaatcgactaatccgagatgaccaatcccaccgcccactttcgggggc 43719155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 211
Target Start/End: Original strand, 53787070 - 53787138
Alignment:
Q  143 cgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||| ||||||||||||  ||||||| |||| |||| |||| ||||||||||  | |||||||||    
T  53787070 cgatccaaaaaccgactaatctgaggggactaatcccaccgcccatttgcgggggctccgtttaaagcc 53787138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 7321 - 7390
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| |||||||||||| |||| |||||||||||||||| | |||||||||    
T  7321 ccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagcc 7390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 66939 - 66870
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||| |||||||||||| |||||||||||| |||| |||||||||||||||| | |||||||||    
T  66939 ccgatccaaggaccgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagcc 66870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 2e-17; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 2639423 - 2639492
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| |||||||||||| |||| |||||||||||||||| | |||||||||    
T  2639423 ccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagcc 2639492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 4718834 - 4718765
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| |||||||||||| |||| |||||||||||||||| | |||||||||    
T  4718834 ccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagcc 4718765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 21603419 - 21603350
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| |||||||||||| |||| |||||||||||||||| | |||||||||    
T  21603419 ccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagcc 21603350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 2618375 - 2618306
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| |||||||||||| |||| |||||||||||||||  | |||||||||    
T  2618375 ccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggctccgtttaaagcc 2618306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 8765538 - 8765607
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| |||||||||||| |||| |||||||||||| ||| | |||||||||    
T  8765538 ccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggagccccgtttaaagcc 8765607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 34237667 - 34237736
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| |||||||||||| |||| | |||||||||||||| | |||||||||    
T  34237667 ccgatccaagaatcgactaatccgaggggaccaatcccaccgctcacttgcgggggccccgtttaaagcc 34237736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 39349445 - 39349376
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| |||||| ||||| |||| |||||||||||||||| | |||||||||    
T  39349445 ccgatccaagaatcgactaatccgaggggatcaatcccaccgcccacttgcgggggccccgtttaaagcc 39349376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 18128701 - 18128633
Alignment:
Q  143 cgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||||||||||||  || ||||||||| |||| |||||||||||||||| | |||||||||    
T  18128701 cgatccaagaaccgactaatctgagaggaccaatcccaccgcccacttgcgggggccccgtttaaagcc 18128633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 211
Target Start/End: Original strand, 26168862 - 26168930
Alignment:
Q  143 cgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    ||||||||||| |||||| ||| ||||||||||||||| | |||||||||| ||| |||||||||||||    
T  26168862 cgatccaagaatcgactactccgaggggaccaatctcatcccccacttgcgaggggctcatttaaagcc 26168930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 196
Target Start/End: Complemental strand, 24018568 - 24018518
Alignment:
Q  146 tccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggg 196  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||| ||||    
T  24018568 tccaagaaccgactaattcaaggggaccaatctcaccgcccacttgtgggg 24018518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 2578061 - 2577991
Alignment:
Q  21 aacctataagctaatctatataatcgactaatctcaaaataattcaagattcgagtcataaatcaaatgataa 93  Q
    |||||||||||||||  |||| ||| |||| ||||||||||||| ||||||  ||||||||||||||||||||    
T  2578061 aacctataagctaat--atatcatctactagtctcaaaataattgaagattaaagtcataaatcaaatgataa 2577991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 3734635 - 3734704
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| |||||||||||| |||  |||| ||||||||||| | |||||||||    
T  3734635 ccgatccaagaatcgactaatccgaggggaccaatcccactgcccatttgcgggggccccgtttaaagcc 3734704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 14633143 - 14633094
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttg 191  Q
    |||||||||||| ||||||||||||||||||||||| |||| ||||||||    
T  14633143 ccgatccaagaatcgactaatccaaggggaccaatcccaccgcccacttg 14633094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 15259418 - 15259487
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||| | |||||||||||  |||| |||||||||||||||| | |||||||||    
T  15259418 ccgatccaagaatcgactaattcgaggggaccaattacaccgcccacttgcgggggccccgtttaaagcc 15259487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 28193663 - 28193594
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| |||||||||||| |||| ||||||||  |||||| | |||||||||    
T  28193663 ccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgtaggggccccgtttaaagcc 28193594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 142 - 192
Target Start/End: Complemental strand, 16990772 - 16990722
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgc 192  Q
    |||||||||| |||||||||||||||||||||| || |||| |||||||||    
T  16990772 ccgatccaaggaccgactaatccaaggggaccagtcccaccgcccacttgc 16990722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 32879465 - 32879411
Alignment:
Q  145 atccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcc 199  Q
    ||||||||| |||||||||| |||||||||||| |||| |||||||| |||||||    
T  32879465 atccaagaatcgactaatccgaggggaccaatcccaccgcccacttgtgggggcc 32879411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 20306097 - 20306028
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||| | |||||||| | |||||||||||| |||| |||||||||||||| | | |||||||||    
T  20306097 ccgatccaaggatcgactaattcgaggggaccaatcccaccgcccacttgcgggggtcccgtttaaagcc 20306028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 21092730 - 21092661
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||| | |||||||| | |||||||||||| |||| |||||||||||||| | | |||||||||    
T  21092730 ccgatccaaggatcgactaattcgaggggaccaatcccaccgcccacttgcgggggtcccgtttaaagcc 21092661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 30051715 - 30051670
Alignment:
Q  50 aatctcaaaataattcaagattcgagtcataaatcaaatgataaaa 95  Q
    ||||||||||||||||||||||| ||| ||| ||||||||||||||    
T  30051715 aatctcaaaataattcaagattcaagttatatatcaaatgataaaa 30051670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 10292242 - 10292174
Alignment:
Q  143 cgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    ||||||||||| | |||||||| | |||||||||| |||| |||||||| ||||||| | |||||||||    
T  10292242 cgatccaagaatcaactaatccgaagggaccaatcccaccgcccacttgtgggggccccgtttaaagcc 10292174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 209
Target Start/End: Complemental strand, 28088475 - 28088408
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaag 209  Q
    |||||||||||| |||||| ||  |||||| ||||| |||| ||||||||||| |||| |||||||||    
T  28088475 ccgatccaagaatcgactattctgaggggatcaatcccaccgcccacttgcggaggccccatttaaag 28088408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 211
Target Start/End: Original strand, 4698738 - 4698804
Alignment:
Q  145 atccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    ||||| ||| |||||||||| |||||||||||| |||| | |||||||||||||  | |||||||||    
T  4698738 atccatgaatcgactaatccgaggggaccaatcccaccgctcacttgcgggggctccgtttaaagcc 4698804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 211
Target Start/End: Complemental strand, 12313027 - 12312966
Alignment:
Q  149 aagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||||| | |||||| ||||| |||| |||||||| ||||||| |||||||||||    
T  12313027 aagaaccgactaattcgaggggatcaatcccaccgcccacttgtgggggcc-catttaaagcc 12312966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 42643130 - 42643184
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggg 196  Q
    |||||||||||| | |||||| | |||||||||||| |||| |||||||||||||    
T  42643130 ccgatccaagaatcaactaatgcgaggggaccaatcccaccgcccacttgcgggg 42643184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 264412 - 264469
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcc 199  Q
    |||||||||||| |||||||| | |||||| |||||||||| |||| ||| |||||||    
T  264412 ccgatccaagaatcgactaattcgaggggatcaatctcaccgcccatttgtgggggcc 264469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 651509 - 651452
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcc 199  Q
    |||||||||||| |||||||| | |||||| |||||||||| |||| ||| |||||||    
T  651509 ccgatccaagaatcgactaattcgaggggatcaatctcaccgcccatttgtgggggcc 651452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 837244 - 837187
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcc 199  Q
    |||||||||||| |||||||| | |||||| |||||||||| |||| ||| |||||||    
T  837244 ccgatccaagaatcgactaattcgaggggatcaatctcaccgcccatttgtgggggcc 837187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 28909012 - 28908943
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||| |||||||||||  |||||| ||||| || | |||||||||||| ||| | |||||||||    
T  28909012 ccgatccaaggaccgactaatctgaggggatcaatcacatcgcccacttgcgggagccccgtttaaagcc 28908943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 34610699 - 34610768
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||| | |||||||||||   ||| |||||||||| ||| ||| |||||||||    
T  34610699 ccgatccaagaatcgactaattcgaggggaccaattctaccgcccacttgcgaggggctcgtttaaagcc 34610768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 42328193 - 42328124
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||| | |||||||||||| || |  ||||||| ||||||| | |||||||||    
T  42328193 ccgatccaagaatcgactaattcgaggggaccaatcccatcgtccacttgtgggggccccgtttaaagcc 42328124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 5740395 - 5740431
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatct 178  Q
    |||||||||| |||||||||||| |||||||||||||    
T  5740395 ccgatccaaggaccgactaatccgaggggaccaatct 5740431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 199
Target Start/End: Original strand, 6953021 - 6953076
Alignment:
Q  143 cgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcc 199  Q
    ||||||||||| |||||||||| |||| ||||||| |||| || |||||||||||||    
T  6953021 cgatccaagaatcgactaatccgaggg-accaatcccaccgccaacttgcgggggcc 6953076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 25248523 - 25248479
Alignment:
Q  155 cgactaatccaaggggaccaatctcaccacccacttgcgggggcc 199  Q
    |||||||||| |||||||||||| |||| |||||||||| |||||    
T  25248523 cgactaatccgaggggaccaatcccaccgcccacttgcgagggcc 25248479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 28964220 - 28964153
Alignment:
Q  143 cgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    ||||| ||||| |||||||| | |||||||||||| |||  |||||||||||||||| | |||||||||    
T  28964220 cgatctaagaatcgactaattcgaggggaccaatcccacg-cccacttgcgggggccccgtttaaagcc 28964153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 2e-17; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 654717 - 654774
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcc 199  Q
    ||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||    
T  654717 ccgatccaagaaccgactaatccgaggggaccaatcccaccgcccacttgcgggggcc 654774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 21835340 - 21835271
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| |||||||||||| |||| |||||||||||||||| | |||||||||    
T  21835340 ccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagcc 21835271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 22120077 - 22120008
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| |||||||||||| |||| |||||||||||||||| | |||||||||    
T  22120077 ccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagcc 22120008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 28090008 - 28089940
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| ||||||||||||||| | |||||||||||||||| |||||||||||    
T  28090008 ccgatccaagaatcgactaatccgaggggaccaatctcatcgcccacttgcgggggcc-catttaaagcc 28089940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 40542922 - 40542991
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| |||||||||||| |||| |||||||||||||||| | |||||||||    
T  40542922 ccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagcc 40542991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 2751460 - 2751391
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| |||||||||||| |||| |||| ||||||||||| | |||||||||    
T  2751460 ccgatccaagaatcgactaatccgaggggaccaatcccaccgcccatttgcgggggccccgtttaaagcc 2751391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 3851946 - 3851877
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| |||||| ||||| |||| |||||||||||||||| | |||||||||    
T  3851946 ccgatccaagaatcgactaatccgaggggatcaatcccaccgcccacttgcgggggccccgtttaaagcc 3851877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 7275466 - 7275409
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcc 199  Q
    |||||||||||| |||||||||| |||||||||||| |||| ||||||||||||||||    
T  7275466 ccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggcc 7275409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 17196962 - 17197031
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||| | |||||||||||| |||| |||||||||||||||| | |||||||||    
T  17196962 ccgatccaagaatcgactaattcgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagcc 17197031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 142 - 197
Target Start/End: Original strand, 7175874 - 7175929
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcggggg 197  Q
    |||||||||||| |||||||||| |||||||||||| |||| ||||||||||||||    
T  7175874 ccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggg 7175929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 142 - 197
Target Start/End: Original strand, 8943413 - 8943468
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcggggg 197  Q
    |||||||||||| |||||||| |||||||||||||| |||| ||||||||||||||    
T  8943413 ccgatccaagaatcgactaattcaaggggaccaatcacaccgcccacttgcggggg 8943468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 208
Target Start/End: Original strand, 43785311 - 43785377
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaa 208  Q
    ||||||||| || ||||||||||||||||||||||||||||  |||||||||| |||| | ||||||    
T  43785311 ccgatccaaaaatcgactaatccaaggggaccaatctcaccgtccacttgcggaggccccgtttaaa 43785377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 2344488 - 2344419
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||| |||||||||||| |||||||||||| |||| | |||||||||||| | | |||||||||    
T  2344488 ccgatccaaggaccgactaatccgaggggaccaatcccaccgctcacttgcgggggtcccgtttaaagcc 2344419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 11998038 - 11997981
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcc 199  Q
    |||||||||||| |||||||| | |||||||||||| |||| ||||||||||||||||    
T  11998038 ccgatccaagaatcgactaattcgaggggaccaatcccaccgcccacttgcgggggcc 11997981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 18044296 - 18044227
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||  |||||||||||  ||||||||||||| ||||||| | |||||||||    
T  18044296 ccgatccaagaatcgactaatctgaggggaccaattccaccacccacttgtgggggccccgtttaaagcc 18044227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 21574114 - 21574171
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcc 199  Q
    |||||||||| |||||||||||| ||||||||||||||||| || ||||| |||||||    
T  21574114 ccgatccaaggaccgactaatccgaggggaccaatctcaccgcctacttgtgggggcc 21574171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 22703675 - 22703606
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||| ||||| |||||||||| |||||||||||| |||| |||||||||||||| | | |||||||||    
T  22703675 ccgatcaaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggtcccgtttaaagcc 22703606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 41907526 - 41907594
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||   ||||||||||| ||||||||||||||||||||| | |||||||||    
T  41907526 ccgatccaagaatcgactaatctg-ggggaccaatcccaccacccacttgcgggggccacgtttaaagcc 41907594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 198
Target Start/End: Complemental strand, 27312341 - 27312285
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggc 198  Q
    |||||||||||| |||||||||  |||||||||||| |||| |||||||||||||||    
T  27312341 ccgatccaagaatcgactaatctgaggggaccaatcccaccgcccacttgcgggggc 27312285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 210
Target Start/End: Complemental strand, 31197779 - 31197711
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagc 210  Q
    |||||||||||| |||||||||  |||||||||||| ||||  ||||||||||||||| | ||||||||    
T  31197779 ccgatccaagaatcgactaatctgaggggaccaatcccaccgaccacttgcgggggccccgtttaaagc 31197711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 211
Target Start/End: Complemental strand, 10091371 - 10091308
Alignment:
Q  148 caagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||| |||||||||| |||||| ||||| |||| ||||||||||||| || |||||||||||    
T  10091371 caagaatcgactaatccgaggggatcaatcccaccgcccacttgcggggaccccatttaaagcc 10091308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 197
Target Start/End: Complemental strand, 25333592 - 25333537
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcggggg 197  Q
    |||||||||||| |||||||||| |||||||||||| |||  ||||||||||||||    
T  25333592 ccgatccaagaatcgactaatccgaggggaccaatcccactgcccacttgcggggg 25333537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 193
Target Start/End: Original strand, 31712914 - 31712965
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcg 193  Q
    |||||||||||| |||||||||| |||||||||||| |||| ||||||||||    
T  31712914 ccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcg 31712965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 16374183 - 16374114
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| |||||||||||| ||||  ||| ||||||||| | | |||||||||    
T  16374183 ccgatccaagaatcgactaatccgaggggaccaatcccaccgtccatttgcgggggtcccgtttaaagcc 16374114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 197
Target Start/End: Complemental strand, 17212240 - 17212187
Alignment:
Q  144 gatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcggggg 197  Q
    |||||||||| |||||||||| |||||||||||| |||||| ||||||| ||||    
T  17212240 gatccaagaatcgactaatccgaggggaccaatcccaccactcacttgcagggg 17212187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 23092285 - 23092216
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||| ||| |||||||||| |||||||||||| ||||  ||| ||||||||||| | |||||||||    
T  23092285 ccgatccatgaatcgactaatccgaggggaccaatcccaccgtccatttgcgggggccccgtttaaagcc 23092216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 29861859 - 29861790
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||| ||||| |||||||| | |||||| ||||| |||| |||||||||||||||| | |||||||||    
T  29861859 ccgatctaagaatcgactaattcgaggggatcaatcccaccgcccacttgcgggggccccgtttaaagcc 29861790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 42913525 - 42913594
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||| ||||| | |||||||| |||||||||||| ||||  ||||||||||||||| | |||||||||    
T  42913525 ccgatctaagaatcaactaatccgaggggaccaatcccaccgtccacttgcgggggccccgtttaaagcc 42913594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 2103230 - 2103175
Alignment:
Q  155 cgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||| |||| ||||||| |||| |||||||||||||||| |||||||||||    
T  2103230 cgactaatccgaggg-accaatcccaccgcccacttgcgggggccccatttaaagcc 2103175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 23012534 - 23012589
Alignment:
Q  156 gactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    ||||||| | |||||||||||| |||| |||||||| ||||||| |||||||||||    
T  23012534 gactaatacgaggggaccaatcccaccgcccacttgtgggggccccatttaaagcc 23012589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 211
Target Start/End: Complemental strand, 27704184 - 27704122
Alignment:
Q  148 caagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||| |||||||||  |||||| ||||| ||||||||||||||||||| | |||||||||||    
T  27704184 caagaatcgactaatctgaggggatcaatcacaccacccacttgcgggggtc-catttaaagcc 27704122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 22638477 - 22638408
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||| | ||| || ||||| |||| ||||||||||| |||| | |||||||||    
T  22638477 ccgatccaagaatcgactaattcgaggagatcaatcccaccgcccacttgcggaggccccgtttaaagcc 22638408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 48433375 - 48433420
Alignment:
Q  53 ctcaaaataattcaagattcgagtcataaatcaaatgataaaaaag 98  Q
    ||||||| |||||||||||| ||||| ||||||||||| |||||||    
T  48433375 ctcaaaagaattcaagattcaagtcaaaaatcaaatgacaaaaaag 48433420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 95
Target Start/End: Original strand, 12270284 - 12270324
Alignment:
Q  55 caaaataattcaagattcgagtcataaatcaaatgataaaa 95  Q
    |||||||||||||||||| || |||||||||||||| ||||    
T  12270284 caaaataattcaagattcaagccataaatcaaatgacaaaa 12270324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 210
Target Start/End: Original strand, 21217845 - 21217913
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagc 210  Q
    |||||||||||| | |||||||| |||||| ||||| |||| |||||||| ||||| | | ||||||||    
T  21217845 ccgatccaagaatcaactaatccgaggggatcaatcccaccgcccacttgtggggggcccgtttaaagc 21217913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 21373886 - 21373830
Alignment:
Q  155 cgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    ||||||||||  | ||||||||||||||  ||||||||||||||| | |||||||||    
T  21373886 cgactaatccgtgaggaccaatctcaccgtccacttgcgggggccccgtttaaagcc 21373830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 31274098 - 31274050
Alignment:
Q  146 tccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgg 194  Q
    |||||||| |||||||| | ||||||||||||||||  |||||||||||    
T  31274098 tccaagaatcgactaattcgaggggaccaatctcactgcccacttgcgg 31274050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 210
Target Start/End: Original strand, 33137837 - 33137904
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagc 210  Q
    |||||| ||||| |||||||| | ||||||||||| ||||| |||||||||  ||||| ||||||||||    
T  33137837 ccgatctaagaatcgactaattcgaggggaccaatttcaccgcccacttgc-agggccccatttaaagc 33137904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 2e-17; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 8097291 - 8097360
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| |||||||||||| |||| |||||||||||||||| | |||||||||    
T  8097291 ccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagcc 8097360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 26174298 - 26174229
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| |||||||||||| |||| ||||||||||||||||  ||||||||||    
T  26174298 ccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccctatttaaagcc 26174229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 30257809 - 30257740
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| |||||||||||  |||| |||||||||||||||| |||||||||||    
T  30257809 ccgatccaagaatcgactaatccgaggggaccaatgccaccgcccacttgcgggggccccatttaaagcc 30257740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 32151609 - 32151540
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||| | ||||||||||||||||| |||||||||||||||| | |||||||||    
T  32151609 ccgatccaagaatcgactaattcgaggggaccaatctcaccgcccacttgcgggggccccgtttaaagcc 32151540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 39041864 - 39041933
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| || ||||||||| ||||||||||||||||||||| | |||||||||    
T  39041864 ccgatccaagaatcgactaatccgagtggaccaatcccaccacccacttgcgggggccccgtttaaagcc 39041933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 46576533 - 46576464
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||||||||||||||||  ||| |||||||||||||||| | |||||||||    
T  46576533 ccgatccaagaatcgactaatccaaggggaccaatccgaccgcccacttgcgggggccccgtttaaagcc 46576464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 144 - 211
Target Start/End: Complemental strand, 54475864 - 54475797
Alignment:
Q  144 gatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||| ||||||||||||||||||||||| |||| ||||||||||| |||| | |||||||||    
T  54475864 gatccaagaatcgactaatccaaggggaccaatcccaccgcccacttgcggtggccccgtttaaagcc 54475797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 145 - 211
Target Start/End: Complemental strand, 35493093 - 35493027
Alignment:
Q  145 atccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    ||||||||| |||||||||| |||||||||||| |||| |||||||||||||||| | |||||||||    
T  35493093 atccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagcc 35493027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 10190754 - 10190823
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| |||||||||||| ||||  ||||||||||||||| | |||||||||    
T  10190754 ccgatccaagaatcgactaatccgaggggaccaatcccaccgtccacttgcgggggccccgtttaaagcc 10190823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 18176899 - 18176968
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| | |||||||||| |||| |||||||||||||||| | |||||||||    
T  18176899 ccgatccaagaatcgactaatccgatgggaccaatcccaccgcccacttgcgggggccccgtttaaagcc 18176968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 25379946 - 25379877
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| |||||||||||| |||| ||| |||||||||||| | |||||||||    
T  25379946 ccgatccaagaatcgactaatccgaggggaccaatcccaccgcccgcttgcgggggccccgtttaaagcc 25379877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 40133461 - 40133530
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||| | |||||||||||| |||| |||||||||||||||| | |||||||||    
T  40133461 ccgatccaagaatcgactaattcgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagcc 40133530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 48977573 - 48977504
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||| |||||||||||| |||||||||||| |||| ||||||||| |||||| | |||||||||    
T  48977573 ccgatccaaggaccgactaatccgaggggaccaatcccaccgcccacttgcaggggccccgtttaaagcc 48977504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 49258274 - 49258343
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| |||||||||||| |||| |||||||| ||||||| | |||||||||    
T  49258274 ccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgtgggggccccgtttaaagcc 49258343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 142 - 197
Target Start/End: Original strand, 53848446 - 53848501
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcggggg 197  Q
    |||||||||||| |||||||||| |||||||||||| |||| ||||||||||||||    
T  53848446 ccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggg 53848501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 8456162 - 8456231
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    ||||| |||||| |||||||||| |||||||||||| |||  |||||||||||||||| | |||||||||    
T  8456162 ccgattcaagaatcgactaatccgaggggaccaatcccactgcccacttgcgggggccccgtttaaagcc 8456231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 10083831 - 10083900
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| |||||||||||| ||||  ||||||| ||||||| | |||||||||    
T  10083831 ccgatccaagaatcgactaatccgaggggaccaatcccaccgtccacttgtgggggccccgtttaaagcc 10083900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 15566512 - 15566569
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcc 199  Q
    |||||||||||| |||||||||  |||||||||||| |||| ||||||||||||||||    
T  15566512 ccgatccaagaatcgactaatctgaggggaccaatcccaccgcccacttgcgggggcc 15566569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 45272428 - 45272497
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||  | |||||||| |||||||||||| |||| |||||||||||||||| | |||||||||    
T  45272428 ccgatccaagagtcaactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagcc 45272497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 48105062 - 48105005
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcc 199  Q
    |||||||||||| |||||||||| | ||||||||||||||| |||||||| |||||||    
T  48105062 ccgatccaagaatcgactaatccgaagggaccaatctcaccgcccacttgtgggggcc 48105005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 53424189 - 53424246
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcc 199  Q
    |||||||||||| |||||||||| |||||||||||| |||| | ||||||||||||||    
T  53424189 ccgatccaagaatcgactaatccgaggggaccaatcccaccgctcacttgcgggggcc 53424246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 198
Target Start/End: Complemental strand, 26158996 - 26158940
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggc 198  Q
    |||||||||| |||||||||||| |||||| ||||| |||| |||||||||||||||    
T  26158996 ccgatccaaggaccgactaatccgaggggatcaatcccaccgcccacttgcgggggc 26158940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 210
Target Start/End: Original strand, 33398480 - 33398548
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagc 210  Q
    |||||||||||| |||||||| | |||| ||||||| |||| |||||||||||||||| | ||||||||    
T  33398480 ccgatccaagaatcgactaattcgagggaaccaatcccaccgcccacttgcgggggccccgtttaaagc 33398548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 211
Target Start/End: Complemental strand, 34844557 - 34844494
Alignment:
Q  147 ccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    ||||| |||||||||||| ||||| |||||| ||||| ||||||||||||||| |||||||||||    
T  34844557 ccaaggaccgactaatccgaggggtccaatcccaccatccacttgcgggggcc-catttaaagcc 34844494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 52455664 - 52455728
Alignment:
Q  145 atccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaag 209  Q
    ||||||||| |||||||||| |||||||||||| |||||  |||||||||||||| | |||||||    
T  52455664 atccaagaatcgactaatccgaggggaccaatcccaccagtcacttgcgggggccccgtttaaag 52455728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 193
Target Start/End: Complemental strand, 24407446 - 24407395
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcg 193  Q
    |||||||||||| |||||||||| |||||||||||| |||| ||||||||||    
T  24407446 ccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcg 24407395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 45529772 - 45529835
Alignment:
Q  148 caagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||| |||||||||| |||||||||||| |||| |||||||||||||| | | |||||||||    
T  45529772 caagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggggcccgtttaaagcc 45529835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 211
Target Start/End: Complemental strand, 49167242 - 49167175
Alignment:
Q  144 gatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||| |||||||||||| |||||| ||||| | ||||||||||||||||||| | | |||||||||    
T  49167242 gatccatgaaccgactaattcaagggaaccaaccccaccacccacttgcgggggtcccgtttaaagcc 49167175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 199
Target Start/End: Original strand, 53233928 - 53233979
Alignment:
Q  148 caagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcc 199  Q
    |||||| |||||||||| |||||||||||| |||| ||||||||||||||||    
T  53233928 caagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggcc 53233979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 24165727 - 24165781
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggg 196  Q
    |||||||||||| |||||||||| |||||| ||||| |||| |||||||||||||    
T  24165727 ccgatccaagaatcgactaatccgaggggaacaatcccaccgcccacttgcgggg 24165781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 52821648 - 52821702
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggg 196  Q
    |||||||||||| |||||||||| |||||||||||| |||| ||||||| |||||    
T  52821648 ccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttacgggg 52821702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 197
Target Start/End: Original strand, 6041684 - 6041737
Alignment:
Q  144 gatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcggggg 197  Q
    |||||||||||||||||||| ||||||| |||||||||| |||| ||| |||||    
T  6041684 gatccaagaaccgactaatctaaggggaacaatctcaccgcccatttgaggggg 6041737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 205
Target Start/End: Original strand, 8958049 - 8958110
Alignment:
Q  144 gatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcattt 205  Q
    |||||||||| ||| |||||  |||||||||||| |||| |||||||||||||||| |||||    
T  8958049 gatccaagaatcgattaatcagaggggaccaatcccaccgcccacttgcgggggccccattt 8958110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 21363128 - 21363059
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| ||| |||||| |||| ||||||| |||| |||||||||||||||  | |||||||||    
T  21363128 ccgatccaagaatcgattaatccgagggaaccaatcccaccgcccacttgcgggggctccgtttaaagcc 21363059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 25289727 - 25289795
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||| | |||| ||||||| |||| |||||||||||||||| | |||||||||    
T  25289727 ccgatccaagaatcgactaattcgaggg-accaatcccaccgcccacttgcgggggccccgtttaaagcc 25289795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 31537850 - 31537919
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    ||||||||||||  ||||||| | ||||||||||||||||| ||||||||| |||||  | |||||||||    
T  31537850 ccgatccaagaattgactaattcgaggggaccaatctcaccgcccacttgcaggggctccgtttaaagcc 31537919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 209
Target Start/End: Complemental strand, 51532968 - 51532907
Alignment:
Q  148 caagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaag 209  Q
    ||||||||||||||||  |||||||||||| ||||  ||||||||||||| | |||||||||    
T  51532968 caagaaccgactaatctgaggggaccaatcccaccgtccacttgcgggggtcccatttaaag 51532907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 55371306 - 55371363
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcc 199  Q
    |||||||||| | |||||||||| |||||||||||| |||| |||||||||| |||||    
T  55371306 ccgatccaaggatcgactaatccgaggggaccaatcccaccgcccacttgcgagggcc 55371363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 194
Target Start/End: Original strand, 17579148 - 17579199
Alignment:
Q  143 cgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgg 194  Q
    |||||||| || |||||||||  ||||||||||||||||| |||||||||||    
T  17579148 cgatccaaaaatcgactaatctgaggggaccaatctcaccgcccacttgcgg 17579199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 209
Target Start/End: Original strand, 32094769 - 32094836
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaag 209  Q
    |||||||||||||||||||||   || ||||||||| |||||||| ||| |||| ||| |||||||||    
T  32094769 ccgatccaagaaccgactaatatgagaggaccaatcccaccacccgcttacgggagccccatttaaag 32094836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 190
Target Start/End: Original strand, 51390155 - 51390193
Alignment:
Q  152 aaccgactaatccaaggggaccaatctcaccacccactt 190  Q
    ||||||||||||| ||||||||||||||||| |||||||    
T  51390155 aaccgactaatccgaggggaccaatctcaccgcccactt 51390193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 25017672 - 25017620
Alignment:
Q  143 cgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggg 196  Q
    ||||||||||| |||||||||||| || ||||||| |||| |||||||||||||    
T  25017672 cgatccaagaatcgactaatccaa-ggaaccaatcccaccgcccacttgcgggg 25017620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 33698718 - 33698787
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    ||||||| |||| ||||||||   |||||||||||| ||||||||| ||||||| ||| | |||||||||    
T  33698718 ccgatccgagaatcgactaatttgaggggaccaatcccaccacccatttgcgggagccccgtttaaagcc 33698787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 2e-17; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 7197259 - 7197328
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||| ||| |||||||||| ||||||||||||||||| ||||||||| |||||||| |||||||||    
T  7197259 ccgatccatgaatcgactaatccgaggggaccaatctcaccgcccacttgcaggggcctcgtttaaagcc 7197328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 34778524 - 34778455
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||| | |||||||||    
T  34778524 ccgatccaagaatcgactaatccaaggggaccaatcccaccgtccacttgcgggggccccgtttaaagcc 34778455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 4621249 - 4621318
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| |||||||||||| |||| ||||||||||||| || | |||||||||    
T  4621249 ccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggaccccgtttaaagcc 4621318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 15059414 - 15059483
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||| | ||||||||||||||||| ||||||||||||| || | |||||||||    
T  15059414 ccgatccaagaatcgactaattcgaggggaccaatctcaccgcccacttgcggggaccccgtttaaagcc 15059483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 24122208 - 24122139
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| |||||||||||| |||| |||||||||||| ||| | |||||||||    
T  24122208 ccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggagccccgtttaaagcc 24122139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 24674578 - 24674509
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||| | |||||||||||| |||| |||||||||||||||| | |||||||||    
T  24674578 ccgatccaagaatcgactaatacgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagcc 24674509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 146 - 211
Target Start/End: Complemental strand, 30677357 - 30677292
Alignment:
Q  146 tccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    ||||||||||||||||||  |||||||||||| |||| |||||||||||||| | |||||||||||    
T  30677357 tccaagaaccgactaatctgaggggaccaatcccaccgcccacttgcgggggtcccatttaaagcc 30677292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 32729729 - 32729660
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||  ||||||||||||||||||| ||||| |||| ||||||||||||| || |||||||||||    
T  32729729 ccgatccaaagaccgactaatccaaggggatcaatcccaccgcccacttgcggggaccccatttaaagcc 32729660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 142 - 209
Target Start/End: Original strand, 7766739 - 7766806
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaag 209  Q
    ||||| |||||| |||||||||| |||||||||||| |||| |||||||||||||||| | |||||||    
T  7766739 ccgattcaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaag 7766806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 8254764 - 8254833
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    ||||| |||||| |||||||| |||||||| ||||| |||| |||||||||||||||| | |||||||||    
T  8254764 ccgattcaagaatcgactaattcaaggggatcaatcccaccgcccacttgcgggggccccgtttaaagcc 8254833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 17935954 - 17935885
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| || ||||||||| || | |||||||||||||||| | |||||||||    
T  17935954 ccgatccaagaatcgactaatccgagtggaccaatcccatcgcccacttgcgggggccccgtttaaagcc 17935885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 37351465 - 37351522
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcc 199  Q
    |||||||||| |||||||||||| |||||||||||| |||| |||||||| |||||||    
T  37351465 ccgatccaaggaccgactaatccgaggggaccaatcccaccgcccacttgtgggggcc 37351522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 40145893 - 40145942
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttg 191  Q
    |||||||||||| |||||||||| |||||||||| |||||||||||||||    
T  40145893 ccgatccaagaatcgactaatccgaggggaccaaactcaccacccacttg 40145942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 199
Target Start/End: Complemental strand, 16899687 - 16899631
Alignment:
Q  143 cgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcc 199  Q
    ||||||||| |||||||||||| |||||||||||||||||  |||||||| ||||||    
T  16899687 cgatccaaggaccgactaatccgaggggaccaatctcaccgtccacttgcaggggcc 16899631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 197
Target Start/End: Original strand, 27454876 - 27454931
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcggggg 197  Q
    |||||||||||| |||||||||| |||||||||||| |||| ||||| ||||||||    
T  27454876 ccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacatgcggggg 27454931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 197
Target Start/End: Complemental strand, 46607995 - 46607940
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcggggg 197  Q
    |||||||||| |||||||||||| |||||| ||||| |||| ||||||||||||||    
T  46607995 ccgatccaaggaccgactaatccgaggggatcaatcccaccgcccacttgcggggg 46607940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 1379082 - 1379025
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcc 199  Q
    |||||| ||||| |||||||||  |||||||||||||||||  |||||||||||||||    
T  1379082 ccgatctaagaatcgactaatctgaggggaccaatctcaccgtccacttgcgggggcc 1379025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 9500367 - 9500436
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| | | ||||||||||||| |||||||| ||||||  | |||||||||    
T  9500367 ccgatccaagaatcgactaatccgaagagaccaatctcaccgcccacttgtgggggctccgtttaaagcc 9500436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 40802082 - 40802135
Alignment:
Q  143 cgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggg 196  Q
    |||| |||||| |||||||| | || ||||||||||||||||||||||||||||    
T  40802082 cgattcaagaatcgactaattctagaggaccaatctcaccacccacttgcgggg 40802135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 45859055 - 45859112
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcc 199  Q
    ||||||||| || | |||||||| ||||||||||||  ||||||||||||||||||||    
T  45859055 ccgatccaataatcaactaatccgaggggaccaatcctaccacccacttgcgggggcc 45859112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 48699944 - 48699875
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| | |||| ||||| |||| |||||||||||||||  | |||||||||    
T  48699944 ccgatccaagaatcgactaatccgaagggaacaatcccaccgcccacttgcgggggctccgtttaaagcc 48699875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 7947004 - 7946961
Alignment:
Q  166 aggggaccaatctcaccacccacttgcgggggcctcatttaaagc 210  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||    
T  7947004 aggggaccaatctcaccacccacttgc-ggggccccatttaaagc 7946961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 210
Target Start/End: Original strand, 8779748 - 8779816
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagc 210  Q
    |||||| ||||| |||||||||| |||||||||||| |||| || ||||| ||||||| | ||||||||    
T  8779748 ccgatctaagaatcgactaatccgaggggaccaatcccaccgcctacttgtgggggccccgtttaaagc 8779816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 199
Target Start/End: Original strand, 26513161 - 26513217
Alignment:
Q  143 cgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcc 199  Q
    ||||||||||| |||||||||| ||||||||| || |||| |||||||| |||||||    
T  26513161 cgatccaagaatcgactaatccgaggggaccattcccaccgcccacttgtgggggcc 26513217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 209
Target Start/End: Complemental strand, 7578594 - 7578527
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaag 209  Q
    ||||||||| || | |||||||| |||| ||||||| ||||||||||||||| ||||| | |||||||    
T  7578594 ccgatccaaaaatcaactaatccgagggaaccaatcccaccacccacttgcgagggccccgtttaaag 7578527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 197
Target Start/End: Complemental strand, 23734302 - 23734247
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcggggg 197  Q
    ||||| |||||| |||||||||  ||||||||||| ||||| ||||||||||||||    
T  23734302 ccgattcaagaatcgactaatctgaggggaccaatttcaccgcccacttgcggggg 23734247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 197
Target Start/End: Complemental strand, 23741494 - 23741439
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcggggg 197  Q
    ||||| |||||| |||||||||  ||||||||||| ||||| ||||||||||||||    
T  23741494 ccgattcaagaatcgactaatctgaggggaccaatttcaccgcccacttgcggggg 23741439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 197
Target Start/End: Complemental strand, 35138173 - 35138118
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcggggg 197  Q
    |||||||||| |||||||||||| |||| | ||||| |||| ||||||||||||||    
T  35138173 ccgatccaaggaccgactaatccgagggaatcaatcccaccgcccacttgcggggg 35138118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 211
Target Start/End: Original strand, 23232300 - 23232342
Alignment:
Q  169 ggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    ||||||||| ||||||||||||||||||| | |||||||||||    
T  23232300 ggaccaatcccaccacccacttgcgggggtcccatttaaagcc 23232342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 2537870 - 2537809
Alignment:
Q  150 agaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    ||||| ||||||||| |||||||||||| | || |||||||||||||| | | |||||||||    
T  2537870 agaactgactaatccgaggggaccaatccctccgcccacttgcggggggcccgtttaaagcc 2537809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 198
Target Start/End: Complemental strand, 22910056 - 22910000
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggc 198  Q
    |||||| ||| | |||||||||| ||||||| |||| |||| |||||||||||||||    
T  22910056 ccgatcgaagtatcgactaatccgaggggacaaatcccaccgcccacttgcgggggc 22910000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 37047165 - 37047109
Alignment:
Q  154 ccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagc 210  Q
    ||||||||||| ||||| |||||| ||||  ||||||| ||||||| ||||||||||    
T  37047165 ccgactaatcctaggggtccaatcccaccgtccacttgtgggggccccatttaaagc 37047109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 144 - 211
Target Start/End: Complemental strand, 39275 - 39208
Alignment:
Q  144 gatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||| |||||||||| |||||||||||| |||| |||||||||||||||| | |||||||||    
T  39275 gatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagcc 39208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 144 - 211
Target Start/End: Complemental strand, 161992 - 161925
Alignment:
Q  144 gatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||| |||||||||| |||||||||||| |||| |||||||||||||||| |||| ||||||    
T  161992 gatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccattaaaagcc 161925  T

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Target: scaffold0028 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 194
Target Start/End: Complemental strand, 27953 - 27903
Alignment:
Q  144 gatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgg 194  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  27953 gatccaagaaccgactaatccgaggggacaaatctcaccacccacttgcgg 27903  T

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Target: scaffold0576 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 5094 - 5163
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| |||||||||||| |||| |||| ||||||||||| | |||||||||    
T  5094 ccgatccaagaatcgactaatccgaggggaccaatcccaccgcccatttgcgggggccccgtttaaagcc 5163  T

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Target: scaffold1175 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1175
Description:

Target: scaffold1175; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 2438 - 2507
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    ||||| |||| || ||||||||| |||||||||||| |||| |||||||||||||||| | |||||||||    
T  2438 ccgattcaaggacggactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagcc 2507  T

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Target: scaffold0070 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 40509 - 40441
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||||||||| |||||||||| |||| ||||||| |||| |||||||||||||||| | |||||||||    
T  40509 ccgatccaagaatcgactaatccgaggg-accaatcccaccgcccacttgcgggggccccgtttaaagcc 40441  T

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Target: scaffold0623 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 1074 - 1137
Alignment:
Q  148 caagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||| |||||||| | |||||||||||| ||||  ||||||||||||||| |||||||||||    
T  1074 caagaatcgactaattcgaggggaccaatcccaccgtccacttgcgggggccccatttaaagcc 1137  T

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Target: scaffold0366 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 9317 - 9380
Alignment:
Q  148 caagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    |||||| |||||||| | |||||||||||| ||||  ||||||||||||||| |||||||||||    
T  9317 caagaatcgactaattcgaggggaccaatcccaccgtccacttgcgggggccccatttaaagcc 9380  T

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Target: scaffold0018 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 70202 - 70254
Alignment:
Q  36 ctatataatcgactaatctcaaaataattcaagattcgagtcataaatcaaat 88  Q
    |||||| ||| |||||||||||||||||||||||||| | |||||||| ||||    
T  70202 ctatatcatctactaatctcaaaataattcaagattcaaatcataaataaaat 70254  T

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Target: scaffold0328 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 15175 - 15107
Alignment:
Q  142 ccgatccaagaaccgactaatccaaggggaccaatctcaccacccacttgcgggggcctcatttaaagcc 211  Q
    ||||||||||||  ||||||||| ||| |||||||| | || |||||||||||||| | |||||||||||    
T  15175 ccgatccaagaattgactaatccgaggagaccaatccc-ccgcccacttgcggggggcccatttaaagcc 15107  T

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