View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1133_low_46 (Length: 305)

Name: NF1133_low_46
Description: NF1133
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1133_low_46
NF1133_low_46
[»] scaffold0383 (1 HSPs)
scaffold0383 (29-296)||(2260-2529)
[»] chr3 (21 HSPs)
chr3 (29-296)||(25058610-25058876)
chr3 (29-298)||(5228184-5228452)
chr3 (32-281)||(18897133-18897381)
chr3 (29-298)||(12264909-12265178)
chr3 (80-296)||(12902209-12902421)
chr3 (29-296)||(44228856-44229122)
chr3 (153-296)||(49232430-49232573)
chr3 (153-296)||(1467858-1468001)
chr3 (192-296)||(15468459-15468563)
chr3 (192-296)||(22275242-22275346)
chr3 (38-168)||(8631669-8631797)
chr3 (224-296)||(18911058-18911130)
chr3 (72-246)||(11986343-11986520)
chr3 (52-169)||(8268990-8269108)
chr3 (52-154)||(17938466-17938566)
chr3 (82-169)||(11477437-11477525)
chr3 (82-153)||(14284882-14284954)
chr3 (52-169)||(8276090-8276208)
chr3 (52-130)||(25104245-25104319)
chr3 (260-295)||(12811942-12811977)
chr3 (231-296)||(54651529-54651594)
[»] scaffold0467 (1 HSPs)
scaffold0467 (29-296)||(10458-10724)
[»] scaffold0761 (1 HSPs)
scaffold0761 (29-296)||(1694-1960)
[»] scaffold1666 (1 HSPs)
scaffold1666 (29-296)||(115-381)
[»] chr2 (22 HSPs)
chr2 (38-296)||(23778164-23778421)
chr2 (29-296)||(21141766-21142032)
chr2 (29-212)||(5888832-5889014)
chr2 (29-212)||(23774008-23774190)
chr2 (133-296)||(16935567-16935730)
chr2 (133-296)||(17006227-17006390)
chr2 (153-296)||(12728386-12728529)
chr2 (153-296)||(34824469-34824612)
chr2 (153-296)||(11231457-11231600)
chr2 (153-296)||(24685900-24686043)
chr2 (153-296)||(22513304-22513447)
chr2 (153-296)||(28775926-28776069)
chr2 (224-296)||(8943911-8943983)
chr2 (224-296)||(12635987-12636059)
chr2 (224-296)||(42178088-42178160)
chr2 (52-169)||(28031485-28031604)
chr2 (224-296)||(3798722-3798794)
chr2 (224-296)||(12641761-12641833)
chr2 (52-163)||(22256189-22256300)
chr2 (52-130)||(29114258-29114334)
chr2 (55-160)||(15633109-15633214)
chr2 (84-156)||(17204254-17204326)
[»] chr7 (18 HSPs)
chr7 (52-296)||(15760233-15760476)
chr7 (29-212)||(16418369-16418551)
chr7 (40-212)||(10000572-10000743)
chr7 (153-296)||(15950910-15951053)
chr7 (153-296)||(7822722-7822865)
chr7 (153-296)||(7830033-7830176)
chr7 (153-296)||(27101756-27101899)
chr7 (153-296)||(27109104-27109247)
chr7 (153-296)||(27176427-27176570)
chr7 (153-296)||(38783848-38783991)
chr7 (32-234)||(48622845-48623049)
chr7 (52-185)||(15852350-15852482)
chr7 (224-296)||(14251017-14251089)
chr7 (224-296)||(15927633-15927705)
chr7 (224-296)||(18980140-18980212)
chr7 (52-130)||(18079767-18079844)
chr7 (224-296)||(13758435-13758507)
chr7 (52-130)||(3192358-3192435)
[»] chr6 (18 HSPs)
chr6 (52-296)||(1555899-1556142)
chr6 (40-296)||(19609901-19610155)
chr6 (29-212)||(29869978-29870159)
chr6 (153-296)||(16376492-16376635)
chr6 (153-296)||(16383816-16383959)
chr6 (153-296)||(16556258-16556401)
chr6 (153-296)||(16632814-16632957)
chr6 (153-296)||(22225857-22226000)
chr6 (153-296)||(10488693-10488836)
chr6 (32-169)||(19629204-19629340)
chr6 (133-246)||(33314387-33314500)
chr6 (68-214)||(29665802-29665947)
chr6 (224-296)||(13620913-13620985)
chr6 (224-296)||(16231957-16232029)
chr6 (224-296)||(18086942-18087014)
chr6 (52-169)||(16300227-16300342)
chr6 (224-296)||(23977834-23977906)
chr6 (82-169)||(32277009-32277096)
[»] chr5 (19 HSPs)
chr5 (40-296)||(7425207-7425461)
chr5 (29-298)||(35791215-35791483)
chr5 (153-296)||(1219639-1219782)
chr5 (52-258)||(11212222-11212427)
chr5 (29-212)||(23328427-23328611)
chr5 (153-296)||(22883203-22883346)
chr5 (153-296)||(35582030-35582173)
chr5 (153-296)||(36989889-36990032)
chr5 (29-212)||(24616039-24616216)
chr5 (29-212)||(24712415-24712592)
chr5 (29-212)||(24745433-24745610)
chr5 (192-296)||(17471707-17471811)
chr5 (153-296)||(21932500-21932643)
chr5 (153-296)||(21938670-21938813)
chr5 (54-246)||(32950590-32950780)
chr5 (224-296)||(23514626-23514698)
chr5 (52-169)||(17909397-17909515)
chr5 (82-153)||(7528821-7528893)
chr5 (224-296)||(10778089-10778161)
[»] scaffold0012 (1 HSPs)
scaffold0012 (29-295)||(34278-34543)
[»] chr4 (17 HSPs)
chr4 (44-296)||(15287364-15287614)
chr4 (44-296)||(15294473-15294723)
chr4 (52-296)||(19020379-19020623)
chr4 (29-296)||(18248089-18248355)
chr4 (29-296)||(8374379-8374645)
chr4 (29-212)||(22352249-22352431)
chr4 (52-296)||(17145776-17146019)
chr4 (153-296)||(18168964-18169107)
chr4 (29-212)||(26338892-26339073)
chr4 (29-200)||(22738142-22738310)
chr4 (224-296)||(7132184-7132256)
chr4 (52-169)||(14996019-14996137)
chr4 (82-169)||(32460923-32461011)
chr4 (52-169)||(19697618-19697736)
chr4 (52-169)||(19708203-19708321)
chr4 (239-296)||(20000803-20000860)
chr4 (82-168)||(8044861-8044949)
[»] scaffold0191 (1 HSPs)
scaffold0191 (29-296)||(7575-7841)
[»] scaffold0003 (1 HSPs)
scaffold0003 (29-212)||(7081-7263)
[»] chr1 (11 HSPs)
chr1 (29-212)||(22035319-22035501)
chr1 (29-212)||(7641136-7641318)
chr1 (153-296)||(18059877-18060020)
chr1 (164-296)||(46523394-46523526)
chr1 (153-296)||(38055210-38055353)
chr1 (153-296)||(17004632-17004775)
chr1 (29-130)||(20254209-20254309)
chr1 (224-296)||(17148632-17148704)
chr1 (52-130)||(20822524-20822601)
chr1 (52-156)||(9784353-9784455)
chr1 (52-130)||(20836356-20836433)
[»] scaffold0183 (1 HSPs)
scaffold0183 (29-212)||(6468-6651)
[»] chr8 (17 HSPs)
chr8 (153-296)||(22006377-22006520)
chr8 (155-296)||(13662384-13662525)
chr8 (153-296)||(22088913-22089056)
chr8 (153-296)||(271479-271622)
chr8 (153-296)||(644298-644441)
chr8 (153-296)||(830033-830176)
chr8 (153-296)||(15319278-15319421)
chr8 (153-296)||(15499647-15499790)
chr8 (133-298)||(16195204-16195370)
chr8 (224-296)||(13721047-13721119)
chr8 (52-169)||(18612298-18612416)
chr8 (52-169)||(18619203-18619321)
chr8 (52-130)||(24907710-24907787)
chr8 (239-296)||(16873170-16873227)
chr8 (82-169)||(21494695-21494783)
chr8 (82-169)||(22147360-22147448)
chr8 (82-169)||(22886247-22886336)
[»] scaffold0107 (2 HSPs)
scaffold0107 (153-296)||(39640-39783)
scaffold0107 (153-296)||(31303-31446)
[»] scaffold0023 (1 HSPs)
scaffold0023 (153-296)||(154126-154269)
[»] scaffold0892 (1 HSPs)
scaffold0892 (32-234)||(3288-3490)
[»] scaffold0017 (1 HSPs)
scaffold0017 (32-234)||(53749-53951)
[»] scaffold0076 (1 HSPs)
scaffold0076 (153-296)||(39097-39240)
[»] scaffold0213 (1 HSPs)
scaffold0213 (156-296)||(29159-29299)
[»] scaffold0066 (3 HSPs)
scaffold0066 (82-292)||(54340-54549)
scaffold0066 (82-233)||(44935-45085)
scaffold0066 (224-292)||(45095-45163)
[»] scaffold0155 (1 HSPs)
scaffold0155 (124-212)||(23951-24039)
[»] scaffold0335 (1 HSPs)
scaffold0335 (52-169)||(5827-5945)
[»] scaffold0207 (1 HSPs)
scaffold0207 (52-169)||(17593-17710)
[»] scaffold0029 (1 HSPs)
scaffold0029 (53-169)||(50094-50211)
[»] scaffold1500 (1 HSPs)
scaffold1500 (224-296)||(1633-1705)
[»] scaffold0118 (1 HSPs)
scaffold0118 (82-169)||(34640-34728)
[»] scaffold0173 (1 HSPs)
scaffold0173 (52-158)||(5114-5220)
[»] scaffold0162 (1 HSPs)
scaffold0162 (52-169)||(11642-11755)
[»] scaffold0615 (1 HSPs)
scaffold0615 (52-168)||(6463-6580)
[»] scaffold1311 (1 HSPs)
scaffold1311 (138-167)||(1652-1681)
[»] scaffold0001 (1 HSPs)
scaffold0001 (93-169)||(165208-165285)


Alignment Details
Target: scaffold0383 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 29 - 296
Target Start/End: Original strand, 2260 - 2529
Alignment:
Q  29 aaggtttacccaaatgtttttagacatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccatt 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  2260 aaggtttacccaaatgtttttagacatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaa-tcaccatttgacccatt 2358  T
Q  129 ttctcaaaacaacaa---caacatctcatttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataa 225  Q
    |||||||||||||||   |||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  2359 ttctcaaaacaacaaaaacaacatctcatttctcatcatcaatccacaattaagtatacccaaaccatgattcactcacaataacatcagttaacaataa 2458  T
Q  226 caacatcaatggaatatgaattgcatctcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    |||||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||||    
T  2459 caacatcaatggaatatgaattacatctcatttcaataaaaacatatcaaatttcatcaattaagtataat 2529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 224; Significance: 1e-123; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 29 - 296
Target Start/End: Original strand, 25058610 - 25058876
Alignment:
Q  29 aaggtttacccaaatgtttttagacatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccatt 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25058610 aaggtttacccaaatgtttttagacatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaa-tcaccatttgacccatt 25058708  T
Q  129 ttctcaaaacaacaacaacatctcatttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaa 228  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||  |||||||||||||||||||||| ||| |||||||||||||||    
T  25058709 ttctcaaaacaacaacaacatctcatttctcatcatcaattcacaattaagtatactcaaatcatgattcactcacaatagcataagttaacaataacaa 25058808  T
Q  229 catcaatggaatatgaattgcatctcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||    
T  25058809 catcaatggaatatgaattacatctcatttcaatcaaaacatatcaaatttcatcaattaagcataat 25058876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 29 - 298
Target Start/End: Original strand, 5228184 - 5228452
Alignment:
Q  29 aaggtttacccaaatgtttttagacatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccatt 128  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  5228184 aaggtttacccaaatgtttttagacatgaaaagatacttaaatccatatacaaacttgaatcaaacatcattttaatcaaaa-tcaccatttgacccatt 5228282  T
Q  129 ttctcaaaacaacaacaacatctcatttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaa 228  Q
    ||||||||||||| ||||||||||||||||||| |||||| |||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  5228283 ttctcaaaacaaccacaacatctcatttctcataatcaattcacaattaagtatacccaaatcatgattcactcacaatagcatcagttaacaataacaa 5228382  T
Q  229 catcaatggaatatgaattgcatctcattttaatcaaaacatatcaaatttcatcaattaagtataatct 298  Q
    ||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||    
T  5228383 catcaatggaatatgaattacacctcatttcaatcaaaacatatcaaatttcatcaattaagtataatct 5228452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 32 - 281
Target Start/End: Complemental strand, 18897381 - 18897133
Alignment:
Q  32 gtttacccaaatgtttttagacatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccattttc 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18897381 gtttacccaaatgtttttagacatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaa-tcaccatttgacccattttc 18897283  T
Q  132 tcaaaacaacaacaacatctcatttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacat 231  Q
    |||||||||||||||||| | ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  18897282 tcaaaacaacaacaacattttatttctcatcatcaatccacaattaagtatacccaaatcatgattcactcacaatagcatcagttaacaataacaacat 18897183  T
Q  232 caatggaatatgaattgcatctcattttaatcaaaacatatcaaatttca 281  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  18897182 caatggaatatgaattacatctcatttcaatcaaaacatatcaaatttca 18897133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 29 - 298
Target Start/End: Complemental strand, 12265178 - 12264909
Alignment:
Q  29 aaggtttacccaaatgtttttagacatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccatt 128  Q
    |||||||| | ||||||||||||||||||||| | ||| |||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||    
T  12265178 aaggtttatcaaaatgtttttagacatgaaaagatactcaaatccatatacaaacttgaatcaaacatcattttaaacaaaa-tcaccatttgacccatt 12265080  T
Q  129 ttctcaaaacaacaacaacatctcatttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaa 228  Q
    ||| ||||||||||||||||||||||||||||||||||||||| ||| | ||||||| || |||| |||||| ||||| |||||||||||| |  |||||    
T  12265079 ttcacaaaacaacaacaacatctcatttctcatcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaacaa 12264980  T
Q  229 catcaatggaatatgaattgcatctcattttaatcaaaacatatc-aaatttcatcaattaagtataatct 298  Q
    ||||||||||| ||||||  |||||||||| ||  | |||||||| |||||||||||||||||||||||||    
T  12264979 catcaatggaacatgaatcacatctcatttcaacaacaacatatcaaaatttcatcaattaagtataatct 12264909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 80 - 296
Target Start/End: Complemental strand, 12902421 - 12902209
Alignment:
Q  80 aaacttgaatcacacatcattttaatcaaaaatcaccatttgacccattttctcaaaacaacaacaacatctcatttctcatcatcaatccacaatgaag 179  Q
    ||||||||||||||||||||||| ||||||| |||||| ||||| |||||| ||||||||||||||   ||| |||||||||||| |||||||||| |||    
T  12902421 aaacttgaatcacacatcattttgatcaaaa-tcaccaattgacacattttttcaaaacaacaaca---tcttatttctcatcattaatccacaattaag 12902326  T
Q  180 tatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatctcattttaatcaaaacatatcaaattt 279  Q
    |||| | ||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  12902325 tatatccaaatcatgattcactcacaatagtatcagttaataataacaacatcaatggaatatgaattacatctcatttcaatcaaaacatatcaaattt 12902226  T
Q  280 catcaattaagtataat 296  Q
     ||||||||||||||||    
T  12902225 aatcaattaagtataat 12902209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 29 - 296
Target Start/End: Original strand, 44228856 - 44229122
Alignment:
Q  29 aaggtttacccaaatgtttttagacatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccatt 128  Q
    |||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||    
T  44228856 aaggtttacccaaatgtttttagacatgaaaagatactcaaatccatatacaaacttgaatcaaacatcattttaaacaaaa-tcaccatttgacccatt 44228954  T
Q  129 ttctcaaaacaacaacaacatctcatttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaa 228  Q
    ||||||||||| |||||||||||||||| |||||||||||||| ||| | ||||||| || |||| |||||| ||||| |||||||||||| |  || ||    
T  44228955 ttctcaaaacatcaacaacatctcatttttcatcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataa 44229054  T
Q  229 catcaatggaatatgaattgcatctcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    | | ||||||| ||||||  |||||||||||||  | ||||||||||  ||||  |||| ||||||||    
T  44229055 ccttaatggaacatgaatcacatctcattttaacaacaacatatcaagattcactaattgagtataat 44229122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 153 - 296
Target Start/End: Original strand, 49232430 - 49232573
Alignment:
Q  153 atttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatc 252  Q
    ||||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||| ||||||||||||||||| |||||||||||||||||||  ||||    
T  49232430 atttctcatcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacatcaatggaatatgaatcacatc 49232529  T
Q  253 tcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    |||||| ||||||||||||||||||||||||||||||| |||||    
T  49232530 tcatttcaatcaaaacatatcaaatttcatcaattaagcataat 49232573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 153 - 296
Target Start/End: Complemental strand, 1468001 - 1467858
Alignment:
Q  153 atttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatc 252  Q
    ||||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||| ||||||||||||||||| |||| ||||||||||||||  ||||    
T  1468001 atttctcatcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatc 1467902  T
Q  253 tcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    || ||| ||||||||||||||||||||||||||||||| |||||    
T  1467901 tcttttcaatcaaaacatatcaaatttcatcaattaagcataat 1467858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 192 - 296
Target Start/End: Complemental strand, 15468563 - 15468459
Alignment:
Q  192 atgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatctcattttaatcaaaacatatcaaatttcatcaattaagt 291  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  15468563 atgattcattcacaataacatcagttaacaataacaacatcaatggaatatgaattacatctcatttcaatcaaaacatatcaaatttcatcaattaagt 15468464  T
Q  292 ataat 296  Q
    |||||    
T  15468463 ataat 15468459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 192 - 296
Target Start/End: Original strand, 22275242 - 22275346
Alignment:
Q  192 atgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatctcattttaatcaaaacatatcaaatttcatcaattaagt 291  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  22275242 atgattcattcacaataacatcagttaacaataacaacatcaatggaatatgaattacatctcatttcaatcaaaacatatcaaatttcatcaattaagt 22275341  T
Q  292 ataat 296  Q
    |||||    
T  22275342 ataat 22275346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 168
Target Start/End: Original strand, 8631669 - 8631797
Alignment:
Q  38 ccaaatgtttttagacatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccattttctcaaaa 137  Q
    ||||| |||| || ||||||||| ||||| |||||||||||||||||||||| | ||||||| || | |||||||||||||||||||||||||| | |||    
T  8631669 ccaaacgtttctaaacatgaaaagacactcaaatccatatacaaacttgaatta-acatcatctt-agcaaaaatcaccatttgacccattttcac-aaa 8631765  T
Q  138 caacaacaacatctca-tttctcatcatcaat 168  Q
    ||||||||||| |||| ||||||||| |||||    
T  8631766 caacaacaacaactcattttctcatcttcaat 8631797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 224 - 296
Target Start/End: Original strand, 18911058 - 18911130
Alignment:
Q  224 aacaacatcaatggaatatgaattgcatctcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    ||||||||||||   |||||| || |||||||||| |||||||||||||||||||||||||||||||||||||    
T  18911058 aacaacatcaattacatatgatttacatctcatttcaatcaaaacatatcaaatttcatcaattaagtataat 18911130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 72 - 246
Target Start/End: Complemental strand, 11986520 - 11986343
Alignment:
Q  72 ccatatacaaacttgaatcacacatcatttt---aatcaaaaatcaccatttgacccattttctcaaaacaacaacaacatctcatttctcatcatcaat 168  Q
    |||| ||||||||||||| | ||||||| ||   ||  |||| ||| ||||| ||||||||| ||||||||| |||||||||| ||||||||||  ||||    
T  11986520 ccatgtacaaacttgaattaaacatcatcttaggaaaaaaaagtcatcatttaacccattttatcaaaacaaaaacaacatcttatttctcatctccaat 11986421  T
Q  169 ccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaat 246  Q
    |||  |  | | ||||| || ||||||||||| ||||| |||||||||||| |  | |||||||||||||| ||||||    
T  11986420 ccatgaatatgcatacccaagtcatgattcacccacaacaacatcagttaatagcatcaacatcaatggaacatgaat 11986343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 52 - 169
Target Start/End: Complemental strand, 8269108 - 8268990
Alignment:
Q  52 acatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccattttctcaaaacaa-caacaacatc 150  Q
    ||||||||| |||||  ||| ||||||   |||||||||| ||||||| |||| | |||||||||||||||||||||||  |||||||| ||||||||||    
T  8269108 acatgaaaagacactcgaatacatataatcacttgaatcaaacatcatcttaaaccaaaatcaccatttgacccatttttgcaaaacaaccaacaacatc 8269009  T
Q  151 tcatttctcatcatcaatc 169  Q
    | |||||||| || |||||    
T  8269008 ttatttctcaccaacaatc 8268990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 52 - 154
Target Start/End: Original strand, 17938466 - 17938566
Alignment:
Q  52 acatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccattttctcaaaacaacaacaacatct 151  Q
    ||||| ||| ||||| |||||||||| ||||||||||| | ||||||| |||  ||||||||||||||||||||||||||  ||||||||||||||| ||    
T  17938466 acatgtaaagacactcaaatccatatgcaaacttgaattaaacatcatcttag-caaaaatcaccatttgacccattttc-aaaaacaacaacaacaact 17938563  T
Q  152 cat 154  Q
    |||    
T  17938564 cat 17938566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 82 - 169
Target Start/End: Complemental strand, 11477525 - 11477437
Alignment:
Q  82 acttgaatcacacatcattttaatcaaaaatcaccatttgacccattttctcaaaacaa-caacaacatctcatttctcatcatcaatc 169  Q
    |||||||||| |||||||||||| | |||||||| ||||||||||||||  |||||||| ||||||||||| |||| |||||| |||||    
T  11477525 acttgaatcaaacatcattttaaaccaaaatcactatttgacccatttttgcaaaacaaccaacaacatcttatttttcatcaacaatc 11477437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 82 - 153
Target Start/End: Original strand, 14284882 - 14284954
Alignment:
Q  82 acttgaatcacacatcattttaatcaaaaatcaccatttgacccattttctcaaaacaa-caacaacatctca 153  Q
    |||||||||| |||||||||||| | |||||| ||||||||||||||||  |||||||| |||||||||||||    
T  14284882 acttgaatcaaacatcattttaaaccaaaatcgccatttgacccatttttgcaaaacaaccaacaacatctca 14284954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 52 - 169
Target Start/End: Complemental strand, 8276208 - 8276090
Alignment:
Q  52 acatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccattttctcaaaacaa-caacaacatc 150  Q
    ||||||||| |||||  ||| ||||||   |||||||||| ||||||| |||| | ||||||||||||||| |||| ||  |||||||| ||||||||||    
T  8276208 acatgaaaagacactcgaatacatataatcacttgaatcaaacatcatcttaaaccaaaatcaccatttgatccatgtttgcaaaacaaccaacaacatc 8276109  T
Q  151 tcatttctcatcatcaatc 169  Q
    | |||||||| || |||||    
T  8276108 ttatttctcaccaacaatc 8276090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 130
Target Start/End: Complemental strand, 25104319 - 25104245
Alignment:
Q  52 acatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccatttt 130  Q
    ||||||||| ||||| ||||||||||| |||||||||||| ||||    || | ||||||||| |||||||||||||||    
T  25104319 acatgaaaagacactcaaatccatataaaaacttgaatcaaacat----ttcaacaaaaatcatcatttgacccatttt 25104245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 260 - 295
Target Start/End: Original strand, 12811942 - 12811977
Alignment:
Q  260 aatcaaaacatatcaaatttcatcaattaagtataa 295  Q
    ||||||||||||||||||||||||||||||| ||||    
T  12811942 aatcaaaacatatcaaatttcatcaattaagcataa 12811977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 296
Target Start/End: Original strand, 54651529 - 54651594
Alignment:
Q  231 tcaatggaatatgaattgcatctcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    ||||||||| ||||||| |||||||||| ||  | ||||||||||| |||| ||||| ||||||||    
T  54651529 tcaatggaacatgaattacatctcatttcaacaacaacatatcaaaattcaccaattgagtataat 54651594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 29 - 296
Target Start/End: Complemental strand, 10724 - 10458
Alignment:
Q  29 aaggtttacccaaatgtttttagacatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccatt 128  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||    
T  10724 aaggtttacccaaatgtttttagacatgaaaagatacttaaatccatatacaaacttgaatcaaacatcattttaatcaaaa-tcaccatttgatccatt 10626  T
Q  129 ttctcaaaacaacaacaacatctcatttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaa 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||| ||||||||| ||||||||||||| |||||    
T  10625 ttctcaaaacaacaacaacatctcatttctcatcatcaatccacaattaagtatacccaagtcatgattccctcacaatagcatcagttaacaacaacaa 10526  T
Q  229 catcaatggaatatgaattgcatctcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  10525 catcaatggaatatgaattacatctcatttcaatcaaaacatatcaaatttcatcaattaagtataat 10458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 29 - 296
Target Start/End: Complemental strand, 1960 - 1694
Alignment:
Q  29 aaggtttacccaaatgtttttagacatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccatt 128  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||    
T  1960 aaggtttacccaaatgttttttgacatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaaccaaaac-caccatttgacccatt 1862  T
Q  129 ttctcaaaacaacaacaacatctcatttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaa 228  Q
    || |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  1861 ttttcaaaacaacaacaacatctcatttctcatcatcaatccacaattaagtatacccaaatcatgattcactcacaatagcatcagttaacaataacaa 1762  T
Q  229 catcaatggaatatgaattgcatctcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    |||||||   |||||| || |||||||||| |||||||||||||||||||||||||||||||||||||    
T  1761 catcaattttatatgatttacatctcatttcaatcaaaacatatcaaatttcatcaattaagtataat 1694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1666 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: scaffold1666
Description:

Target: scaffold1666; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 29 - 296
Target Start/End: Complemental strand, 381 - 115
Alignment:
Q  29 aaggtttacccaaatgtttttagacatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccatt 128  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  381 aaggtttacccaaatgattttagacatgaaaatacacttatatccatacacaaacttgaatcacacatcattttgatcaaaa-tcaccatttgacccatt 283  T
Q  129 ttctcaaaacaacaacaacatctcatttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaa 228  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||| |    
T  282 ttcttaaaacaacaacaacatcttatttctcatcatcaatccacaattaagtatacccaaatcatgattcactcacaatagcatcagttaacaataacta 183  T
Q  229 catcaatggaatatgaattgcatctcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    |||||||| |||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||||    
T  182 catcaatgtaatatgaattacatctcatttcaattaaaacatatcaaatttcatcaattaagtataat 115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 203; Significance: 1e-111; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 38 - 296
Target Start/End: Complemental strand, 23778421 - 23778164
Alignment:
Q  38 ccaaatgtttttagacatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccattttctcaaaa 137  Q
    ||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||    
T  23778421 ccaaacgtttttagacatgaaaatacacttatattcatatacaaacttgaatcacacatcattttgatcaaaa-tcaccaattgacccattttctcaaaa 23778323  T
Q  138 caacaacaacatctcatttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatgg 237  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  23778322 caacaacaacatcttatttctcatcatcaatccacaattaagtatacccaaatcatgattcactcacaatagcatcagttaacaataacaacatcaatgg 23778223  T
Q  238 aatatgaattgcatctcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    |||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||    
T  23778222 aatatgaattacatctcatttcaatcaaatcatatcaaatttcatcaattaagtataat 23778164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 29 - 296
Target Start/End: Original strand, 21141766 - 21142032
Alignment:
Q  29 aaggtttacccaaatgtttttagacatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccatt 128  Q
    |||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||    
T  21141766 aaggtttacccaaatgtttttagacatgaaaagatactcaaatccatatacaaacttgaatcaaacatcattttaaacaaaa-tcaccatttgacccatt 21141864  T
Q  129 ttctcaaaacaacaacaacatctcatttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaa 228  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||| | ||||||| || || | |||||| ||||| |||||||||||| |  || ||    
T  21141865 ttctcaaaacaacaacaacatctcatttttcatcatcaatccataattatgtatacccaagtcgtaattcacccacaacaacatcagttaatagcaataa 21141964  T
Q  229 catcaatggaatatgaattgcatctcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    | | ||||||| ||||||  |||||||||||||  | ||||||||||  ||||  |||| ||||||||    
T  21141965 ccttaatggaacatgaatcacatctcattttaacaacaacatatcaagattcactaattgagtataat 21142032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 29 - 212
Target Start/End: Complemental strand, 5889014 - 5888832
Alignment:
Q  29 aaggtttacccaaatgtttttagacatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccatt 128  Q
    |||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||    
T  5889014 aaggtttacccaaatgtttttagacatgaaaagatactcaaatccatatacaaacttgaatcaaacatcattttaaacaaaa-tcaccatttgacccatt 5888916  T
Q  129 ttctcaaaacaacaacaacatctcatttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacat 212  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||| | ||||||| || |||| |||||||||||| |||||    
T  5888915 ttctcaaaacaacaacaacatctcatttttcatcatcaatccataattatgtatacccaagtcataattcactcacaacaacat 5888832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 29 - 212
Target Start/End: Original strand, 23774008 - 23774190
Alignment:
Q  29 aaggtttacccaaatgtttttagacatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccatt 128  Q
    |||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||| |||| ||||||| ||||| |||||||||||||||||    
T  23774008 aaggtttacccaaatgtttttagacatgaaaagatactcaaatccatatacaaacttgaatcaaacattattttaaacaaaa-tcaccatttgacccatt 23774106  T
Q  129 ttctcaaaacaacaacaacatctcatttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacat 212  Q
    ||| |||||||||||||||||||||||| |||||||||||||| ||| ||||||||| || | || |||||||||||| |||||    
T  23774107 ttcacaaaacaacaacaacatctcatttttcatcatcaatccataattaagtatacccaagttataattcactcacaacaacat 23774190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 133 - 296
Target Start/End: Original strand, 16935567 - 16935730
Alignment:
Q  133 caaaacaacaacaacatctcatttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatc 232  Q
    |||| |||||||||||  | ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||| ||||||||||| |||||    
T  16935567 caaaccaacaacaacaatttatttctcatcatcaatccacaattaagtatacccaaatcatgattcactcacaatagcatcatttaacaataaccacatc 16935666  T
Q  233 aatggaatatgaattgcatctcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    ||||||||||||||  |||||||||| ||||||||||||||||||||||||||| |||||||||    
T  16935667 aatggaatatgaatcacatctcatttcaatcaaaacatatcaaatttcatcaataaagtataat 16935730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 133 - 296
Target Start/End: Original strand, 17006227 - 17006390
Alignment:
Q  133 caaaacaacaacaacatctcatttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatc 232  Q
    |||| |||||||||||  | ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||| ||||||||||| |||||    
T  17006227 caaaccaacaacaacaatttatttctcatcatcaatccacaattaagtatacccaaatcatgattcactcacaatagcatcatttaacaataaccacatc 17006326  T
Q  233 aatggaatatgaattgcatctcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    ||||||||||||||  |||||||||| ||||||||||||||||||||||||||| |||||||||    
T  17006327 aatggaatatgaatcacatctcatttcaatcaaaacatatcaaatttcatcaataaagtataat 17006390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 153 - 296
Target Start/End: Original strand, 12728386 - 12728529
Alignment:
Q  153 atttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatc 252  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||  ||||    
T  12728386 atttctcatcatcaatccacaattaagtatacccaaatcatgattcactcacaatagcatcagttaacaataaccacatcaatggaatatgaatcacatc 12728485  T
Q  253 tcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    |||||| ||| ||||||||||||||||||||||||||| |||||    
T  12728486 tcatttcaataaaaacatatcaaatttcatcaattaagaataat 12728529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 153 - 296
Target Start/End: Original strand, 34824469 - 34824612
Alignment:
Q  153 atttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatc 252  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||  ||||    
T  34824469 atttctcatcatcaatccacaattaagtatacccaaatcatgattcactcacaatagcatcagttaacaataaccacatcaatggaatatgaatcacatc 34824568  T
Q  253 tcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    |||||| ||| ||||||||||||||||||||||||||| |||||    
T  34824569 tcatttcaataaaaacatatcaaatttcatcaattaagaataat 34824612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 153 - 296
Target Start/End: Complemental strand, 11231600 - 11231457
Alignment:
Q  153 atttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatc 252  Q
    ||||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||| ||||||||||||||||| |||| ||||||||||||||  ||||    
T  11231600 atttctcatcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatc 11231501  T
Q  253 tcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    || ||| ||||||||||||||||||||||||||||||| |||||    
T  11231500 tcttttcaatcaaaacatatcaaatttcatcaattaagcataat 11231457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 153 - 296
Target Start/End: Complemental strand, 24686043 - 24685900
Alignment:
Q  153 atttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatc 252  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||| ||||||||||||||||| |||| ||||||||||||||  ||||    
T  24686043 atttctcatcatcaatccacaattaagtatacctaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatc 24685944  T
Q  253 tcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    || ||| |||||||||| |||||||||||||||||||| |||||    
T  24685943 tcttttcaatcaaaacacatcaaatttcatcaattaagcataat 24685900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 153 - 296
Target Start/End: Complemental strand, 22513447 - 22513304
Alignment:
Q  153 atttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatc 252  Q
    ||||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||| ||||||||||||||||| |||| ||||||||||||||  ||||    
T  22513447 atttctcatcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatc 22513348  T
Q  253 tcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    || ||| ||||||| ||||||||||||||||||||||| |||||    
T  22513347 tcttttcaatcaaagcatatcaaatttcatcaattaagcataat 22513304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 153 - 296
Target Start/End: Complemental strand, 28776069 - 28775926
Alignment:
Q  153 atttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatc 252  Q
    ||||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||| ||||||||||||||||| |||| ||||||||||||||  ||||    
T  28776069 atttctcatcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatc 28775970  T
Q  253 tcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    || ||| ||||||| ||||||||||||||||||||||| |||||    
T  28775969 tcttttcaatcaaagcatatcaaatttcatcaattaagcataat 28775926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 224 - 296
Target Start/End: Original strand, 8943911 - 8943983
Alignment:
Q  224 aacaacatcaatggaatatgaattgcatctcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    ||||||||||||   |||||| || |||||||||| |||||||||||||||||||||||||||||||||||||    
T  8943911 aacaacatcaattacatatgatttacatctcatttcaatcaaaacatatcaaatttcatcaattaagtataat 8943983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 224 - 296
Target Start/End: Complemental strand, 12636059 - 12635987
Alignment:
Q  224 aacaacatcaatggaatatgaattgcatctcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    ||||||||||||   |||||| || |||||||||| |||||||||||||||||||||||||||||||||||||    
T  12636059 aacaacatcaattacatatgatttacatctcatttcaatcaaaacatatcaaatttcatcaattaagtataat 12635987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 224 - 296
Target Start/End: Complemental strand, 42178160 - 42178088
Alignment:
Q  224 aacaacatcaatggaatatgaattgcatctcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    ||||||||||||   |||||| || |||||||||| |||||||||||||||||||||||||||||||||||||    
T  42178160 aacaacatcaattacatatgatttacatctcatttcaatcaaaacatatcaaatttcatcaattaagtataat 42178088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 52 - 169
Target Start/End: Complemental strand, 28031604 - 28031485
Alignment:
Q  52 acatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccattttctcaaaacaa-caacaacatc 150  Q
    ||||||||| ||||| || |||||| |   |||||||||| |||||||||||| | ||||||| |||||||||||||||  |||||||| ||||||||||    
T  28031604 acatgaaaagacactcaattccataaaaccacttgaatcaaacatcattttaacccaaaatcatcatttgacccatttttgcaaaacaaccaacaacatc 28031505  T
Q  151 tca-tttctcatcatcaatc 169  Q
    ||| |||||||||| |||||    
T  28031504 tcattttctcatcaacaatc 28031485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 224 - 296
Target Start/End: Complemental strand, 3798794 - 3798722
Alignment:
Q  224 aacaacatcaatggaatatgaattgcatctcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    ||||||||||||   |||||| || |||||||||| || ||||||||||||||||||||||||||||||||||    
T  3798794 aacaacatcaattacatatgatttacatctcatttcaaccaaaacatatcaaatttcatcaattaagtataat 3798722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 224 - 296
Target Start/End: Complemental strand, 12641833 - 12641761
Alignment:
Q  224 aacaacatcaatggaatatgaattgcatctcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    ||||||||||||   |||||| || |||||||||| || ||||||||||||||||||||||||||||||||||    
T  12641833 aacaacatcaattacatatgatttacatctcatttcaaccaaaacatatcaaatttcatcaattaagtataat 12641761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 163
Target Start/End: Original strand, 22256189 - 22256300
Alignment:
Q  52 acatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccattttctcaaaacaa-caacaacatc 150  Q
    ||||||||| ||||| || | ||||||   |||||||||| ||||||||||||  ||||||||||||||||||||||||   ||||||| ||||||||||    
T  22256189 acatgaaaagacactcaattacatataactacttgaatcaaacatcattttaaa-aaaaatcaccatttgacccatttttgtaaaacaaccaacaacatc 22256287  T
Q  151 tcatttctcatca 163  Q
    | |||||||||||    
T  22256288 ttatttctcatca 22256300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 52 - 130
Target Start/End: Original strand, 29114258 - 29114334
Alignment:
Q  52 acatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccatttt 130  Q
    ||||||||| ||||| ||||||||||| |||||||||||| ||||||||| ||   ||||||| |||||||||||||||    
T  29114258 acatgaaaaaacactcaaatccatataaaaacttgaatcaaacatcatttcaa--caaaatcatcatttgacccatttt 29114334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 160
Target Start/End: Original strand, 15633109 - 15633214
Alignment:
Q  55 tgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccattttctcaaaacaa-caacaacatctca 153  Q
    |||||| ||||| || ||||||||   |||||||||  |||||||||||| ||||| ||| |||||||||||||||  |||||||| ||||||||||| |    
T  15633109 tgaaaagacactcaattccatataaccacttgaatctaacatcattttaaacaaaa-tcatcatttgacccatttttgcaaaacaaccaacaacatctta 15633207  T
Q  154 tttctca 160  Q
    |||||||    
T  15633208 tttctca 15633214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 156
Target Start/End: Original strand, 17204254 - 17204326
Alignment:
Q  84 ttgaatcacacatcattttaatcaaaaatcaccatttgacccattttctcaaaacaa-caacaacatctcattt 156  Q
    |||||||| |||||||||||| | |||||||||||||||| ||||||   ||||||| ||||||||||||||||    
T  17204254 ttgaatcaaacatcattttaaac-aaaatcaccatttgactcatttttgtaaaacaaccaacaacatctcattt 17204326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 173; Significance: 5e-93; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 52 - 296
Target Start/End: Complemental strand, 15760476 - 15760233
Alignment:
Q  52 acatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccattttctcaaaacaacaacaacatct 151  Q
    ||||||||| ||||| ||||||||||| |||||||||| | || ||||||||| ||||| |||||||||||| ||||||| |||||||||||||||||||    
T  15760476 acatgaaaagacactcaaatccatataaaaacttgaattaaacttcattttaaacaaaa-tcaccatttgactcattttcacaaaacaacaacaacatct 15760378  T
Q  152 catttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcat 251  Q
    |||||||||||||||||||||||| ||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  15760377 catttctcatcatcaatccacaattaagtatacccaattcattattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattacat 15760278  T
Q  252 ctcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||    
T  15760277 ctcatttcaattaaaacatatcaaatttcatcaattaagtataat 15760233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 29 - 212
Target Start/End: Original strand, 16418369 - 16418551
Alignment:
Q  29 aaggtttacccaaatgtttttagacatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccatt 128  Q
    |||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||    
T  16418369 aaggtttacccaaatgtttttagacatgaaaagatactcaaatccatatacaaacttgaatcaaacatcattttaaacaaaa-tcaccatttgacccatt 16418467  T
Q  129 ttctcaaaacaacaacaacatctcatttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacat 212  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||| | ||||||| || |||| |||||||||||| |||||    
T  16418468 ttctcaaaacaacaacaacatctcatttttcatcatcaatccataattatgtatacccaagtcataattcactcacaacaacat 16418551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 40 - 212
Target Start/End: Complemental strand, 10000743 - 10000572
Alignment:
Q  40 aaatgtttttagacatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccattttctcaaaaca 139  Q
    ||||||||||||||||||||| | ||| |||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||    
T  10000743 aaatgtttttagacatgaaaagatactcaaatccatatacaaacttgaatcaaacatcattttaaacaaaa-tcaccatttgacccattttctcaaaaca 10000645  T
Q  140 acaacaacatctcatttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacat 212  Q
    ||||||||||||||||| |||||||||||||| ||| ||||||||| || | || |||||||||||| |||||    
T  10000644 acaacaacatctcatttttcatcatcaatccataattaagtatacccaagttataattcactcacaacaacat 10000572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 153 - 296
Target Start/End: Complemental strand, 15951053 - 15950910
Alignment:
Q  153 atttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatc 252  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||| ||||||||||||||||  |||||||||||||||||||  ||||    
T  15951053 atttctcatcatcaatccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataatcacatcaatggaatatgaatcacatc 15950954  T
Q  253 tcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    |||||| ||||||||||||||||||||||||||||||| |||||    
T  15950953 tcatttcaatcaaaacatatcaaatttcatcaattaagcataat 15950910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 153 - 296
Target Start/End: Original strand, 7822722 - 7822865
Alignment:
Q  153 atttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatc 252  Q
    ||||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||| ||||||||||||||||| |||| ||||||||||||||  ||||    
T  7822722 atttctcatcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatc 7822821  T
Q  253 tcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    || ||| ||||||| ||||||||||||||||||||||| |||||    
T  7822822 tcttttcaatcaaagcatatcaaatttcatcaattaagcataat 7822865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 153 - 296
Target Start/End: Original strand, 7830033 - 7830176
Alignment:
Q  153 atttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatc 252  Q
    ||||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||| ||||||||||||||||| |||| ||||||||||||||  ||||    
T  7830033 atttctcatcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatc 7830132  T
Q  253 tcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    || ||| ||||||| ||||||||||||||||||||||| |||||    
T  7830133 tcttttcaatcaaagcatatcaaatttcatcaattaagcataat 7830176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 153 - 296
Target Start/End: Complemental strand, 27101899 - 27101756
Alignment:
Q  153 atttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatc 252  Q
    ||||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||| ||||||||||||||||| |||| ||||||||||||||  ||||    
T  27101899 atttctcatcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatc 27101800  T
Q  253 tcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    || ||| ||||||| ||||||||||||||||||||||| |||||    
T  27101799 tcttttcaatcaaagcatatcaaatttcatcaattaagcataat 27101756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 153 - 296
Target Start/End: Complemental strand, 27109247 - 27109104
Alignment:
Q  153 atttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatc 252  Q
    ||||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||| ||||||||||||||||| |||| ||||||||||||||  ||||    
T  27109247 atttctcatcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatc 27109148  T
Q  253 tcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    || ||| ||||||| ||||||||||||||||||||||| |||||    
T  27109147 tcttttcaatcaaagcatatcaaatttcatcaattaagcataat 27109104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 153 - 296
Target Start/End: Original strand, 27176427 - 27176570
Alignment:
Q  153 atttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatc 252  Q
    ||||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||| ||||||||||||||||| |||| ||||||||||||||  ||||    
T  27176427 atttctcatcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatc 27176526  T
Q  253 tcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    || ||| ||||||| ||||||||||||||||||||||| |||||    
T  27176527 tcttttcaatcaaagcatatcaaatttcatcaattaagcataat 27176570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 153 - 296
Target Start/End: Complemental strand, 38783991 - 38783848
Alignment:
Q  153 atttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatc 252  Q
    ||||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||| ||||||||||||||||| |||| ||||||||||||||  ||||    
T  38783991 atttctcatcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatc 38783892  T
Q  253 tcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    || ||| ||||||| ||||||||||||||||||||||| |||||    
T  38783891 tcttttcaatcaaagcatatcaaatttcatcaattaagcataat 38783848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 32 - 234
Target Start/End: Complemental strand, 48623049 - 48622845
Alignment:
Q  32 gtttacccaaatgtttttagacatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccattttc 131  Q
    ||||||||||| ||||||| ||||||||| | |||||||  ||||||||||||||||||| |||||| ||||| ||| | ||||||||||||||||||||    
T  48623049 gtttacccaaacgtttttatacatgaaaagatacttaaaatcatatacaaacttgaatcaaacatcaatttaaacaaca-tcaccatttgacccattttc 48622951  T
Q  132 tcaaaacaacaacaacatctca--tttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataa-catcagttaacaataacaa 228  Q
    ||||||||||||||||||||||  |||||||||| ||| |||  |  | ||||||| || ||||| |||||||||||||| ||||| ||||||| |||||    
T  48622950 tcaaaacaacaacaacatctcatttttctcatcaacaacccatgaacatgtatacccaagtcatggttcactcacaataatcatcatttaacaacaacaa 48622851  T
Q  229 catcaa 234  Q
    ||||||    
T  48622850 catcaa 48622845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 52 - 185
Target Start/End: Original strand, 15852350 - 15852482
Alignment:
Q  52 acatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccattttctcaaaacaacaacaacatct 151  Q
    |||||||||  |||| ||||||||||| |||||||||| | || ||||||||| ||||| |||| ||||||||||||||| |||||||||||||||||||    
T  15852350 acatgaaaaggcactcaaatccatataaaaacttgaattaaacttcattttaaacaaaa-tcacaatttgacccattttcacaaaacaacaacaacatct 15852448  T
Q  152 catttctcatcatcaatccacaatgaagtatacc 185  Q
    |||||||||||||||||||| ||| | |||||||    
T  15852449 catttctcatcatcaatccataattatgtatacc 15852482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 224 - 296
Target Start/End: Complemental strand, 14251089 - 14251017
Alignment:
Q  224 aacaacatcaatggaatatgaattgcatctcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    ||||||||||||   |||||| || |||||||||| |||||||||||||||||||||||||||||||||||||    
T  14251089 aacaacatcaattacatatgatttacatctcatttcaatcaaaacatatcaaatttcatcaattaagtataat 14251017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 224 - 296
Target Start/End: Original strand, 15927633 - 15927705
Alignment:
Q  224 aacaacatcaatggaatatgaattgcatctcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    ||||||||||||   |||||| || |||||||||| |||||||||||||||||||||||||||||||||||||    
T  15927633 aacaacatcaattacatatgatttacatctcatttcaatcaaaacatatcaaatttcatcaattaagtataat 15927705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 224 - 296
Target Start/End: Complemental strand, 18980212 - 18980140
Alignment:
Q  224 aacaacatcaatggaatatgaattgcatctcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    ||||||||||||   |||||| || |||||||||| |||||||||||||||||||||||||||||||||||||    
T  18980212 aacaacatcaattacatatgatttacatctcatttcaatcaaaacatatcaaatttcatcaattaagtataat 18980140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 52 - 130
Target Start/End: Complemental strand, 18079844 - 18079767
Alignment:
Q  52 acatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccatttt 130  Q
    ||||||||| ||||| ||||||||||| |||||||||||| | ||||||| || |||||||||||||||||||||||||    
T  18079844 acatgaaaagacactcaaatccatataaaaacttgaatcaaatatcatttcaa-caaaaatcaccatttgacccatttt 18079767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 224 - 296
Target Start/End: Original strand, 13758435 - 13758507
Alignment:
Q  224 aacaacatcaatggaatatgaattgcatctcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    ||||||||||||   |||||| || |||||||||| || ||||||||||||||||||||||||||||||||||    
T  13758435 aacaacatcaattacatatgatttacatctcatttcaaccaaaacatatcaaatttcatcaattaagtataat 13758507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 52 - 130
Target Start/End: Complemental strand, 3192435 - 3192358
Alignment:
Q  52 acatgaaaatacacttaaatccatatacaaacttgaatcaca-catcattttaatcaaaaatcaccatttgacccatttt 130  Q
    ||||||||| ||||| ||||||||||| |||||| || || | |||||||| || |||||||||||||||||||||||||    
T  3192435 acatgaaaagacactcaaatccatata-aaacttaaaccaaaacatcatttcaa-caaaaatcaccatttgacccatttt 3192358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 173; Significance: 5e-93; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 52 - 296
Target Start/End: Original strand, 1555899 - 1556142
Alignment:
Q  52 acatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccattttctcaaaacaacaacaacatct 151  Q
    ||||||||| ||||| ||||||||||| |||||||||| | || ||||||||| ||||| |||||||||||| ||||||| |||||||||||||||||||    
T  1555899 acatgaaaagacactcaaatccatataaaaacttgaattaaacttcattttaaacaaaa-tcaccatttgactcattttcacaaaacaacaacaacatct 1555997  T
Q  152 catttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcat 251  Q
    |||||||||||||||||||||||| ||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  1555998 catttctcatcatcaatccacaattaagtatacccaattcataattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattacat 1556097  T
Q  252 ctcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||    
T  1556098 ctcatttcaattaaaacatatcaaatttcatcaattaagtataat 1556142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 40 - 296
Target Start/End: Original strand, 19609901 - 19610155
Alignment:
Q  40 aaatgtttttagacatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccattttctcaaaaca 139  Q
    |||||||| |||||||||||| ||||| || ||||||||||||||||||||| |||||||||||| ||||| ||| |||| |||||||||||||||||||    
T  19609901 aaatgtttctagacatgaaaagacactcaattccatatacaaacttgaatcaaacatcattttaaacaaaa-tcatcatt-gacccattttctcaaaaca 19609998  T
Q  140 acaacaacatctcatttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaa 239  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||| || ||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  19609999 acaacaacatctcatttctcatcatcaatccataattaagtatacccaagtcatgattcactcacaacagcatcagttaacaataacaacatcaatggaa 19610098  T
Q  240 tatgaattgcatctcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    |||||| | |||||||||| ||||||||||||||||||||||||||| |||||||||    
T  19610099 tatgaactacatctcatttcaatcaaaacatatcaaatttcatcaatgaagtataat 19610155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 29 - 212
Target Start/End: Complemental strand, 29870159 - 29869978
Alignment:
Q  29 aaggtttacccaaatgtttttagacatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccatt 128  Q
    |||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||| |||| |||| ||   |||||||||||||||||||||    
T  29870159 aaggtttacccaaatgtttttagacatgaaaagatactcaaatccatatacaaacttgaatcaaacattatttaaac--aaaatcaccatttgacccatt 29870062  T
Q  129 ttctcaaaacaacaacaacatctcatttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacat 212  Q
    ||||||||||||| |||||||||||||| ||||||||||||||  || ||||| ||| || | || |||||||||||| |||||    
T  29870061 ttctcaaaacaacgacaacatctcatttttcatcatcaatccatcattaagtacacccaagttataattcactcacaacaacat 29869978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 153 - 296
Target Start/End: Complemental strand, 16376635 - 16376492
Alignment:
Q  153 atttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatc 252  Q
    ||||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||| ||||||||||||||||| |||| ||||||||||||||  ||||    
T  16376635 atttctcatcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatc 16376536  T
Q  253 tcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    || ||| ||||||||||||||||||||||||||||||| |||||    
T  16376535 tcttttcaatcaaaacatatcaaatttcatcaattaagcataat 16376492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 153 - 296
Target Start/End: Complemental strand, 16383959 - 16383816
Alignment:
Q  153 atttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatc 252  Q
    ||||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||| ||||||||||||||||| |||| ||||||||||||||  ||||    
T  16383959 atttctcatcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatc 16383860  T
Q  253 tcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    || ||| ||||||||||||||||||||||||||||||| |||||    
T  16383859 tcttttcaatcaaaacatatcaaatttcatcaattaagcataat 16383816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 153 - 296
Target Start/End: Complemental strand, 16556401 - 16556258
Alignment:
Q  153 atttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatc 252  Q
    ||||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||| ||||||||||||||||| |||| ||||||||||||||  ||||    
T  16556401 atttctcatcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatc 16556302  T
Q  253 tcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    || ||| ||||||||||||||||||||||||||||||| |||||    
T  16556301 tcttttcaatcaaaacatatcaaatttcatcaattaagcataat 16556258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 153 - 296
Target Start/End: Complemental strand, 16632957 - 16632814
Alignment:
Q  153 atttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatc 252  Q
    ||||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||| ||||||||||||||||| |||| ||||||||||||||  ||||    
T  16632957 atttctcatcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatc 16632858  T
Q  253 tcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    || ||| ||||||||||||||||||||||||||||||| |||||    
T  16632857 tcttttcaatcaaaacatatcaaatttcatcaattaagcataat 16632814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 153 - 296
Target Start/End: Complemental strand, 22226000 - 22225857
Alignment:
Q  153 atttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatc 252  Q
    ||||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||| ||||||||||||||||| |||| ||||||||||||||  ||||    
T  22226000 atttctcatcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatc 22225901  T
Q  253 tcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    |||||| ||||||||||| ||||||||||||||||||| |||||    
T  22225900 tcatttcaatcaaaacatttcaaatttcatcaattaagcataat 22225857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 153 - 296
Target Start/End: Original strand, 10488693 - 10488836
Alignment:
Q  153 atttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatc 252  Q
    ||||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||| ||||||||||||||||| |||| ||||||||||||||  ||||    
T  10488693 atttctcatcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatc 10488792  T
Q  253 tcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    || ||| ||||||| ||||||||||||||||||||||| |||||    
T  10488793 tcttttcaatcaaagcatatcaaatttcatcaattaagcataat 10488836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 32 - 169
Target Start/End: Original strand, 19629204 - 19629340
Alignment:
Q  32 gtttacccaaatgtttttagacatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccattttc 131  Q
    |||||||  |||||||||||||||||||| | ||| |||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||    
T  19629204 gtttaccacaatgtttttagacatgaaaagatactcaaatccatatacaaacttgaatcaaacatcattttaaac-aaaatcaccatttgacccattttc 19629302  T
Q  132 tcaaaacaacaacaacatctcatttctcatcatcaatc 169  Q
    |||||||||  |||||| ||||||||||| || |||||    
T  19629303 tcaaaacaatcacaacaactcatttctcaccaacaatc 19629340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 133 - 246
Target Start/End: Complemental strand, 33314500 - 33314387
Alignment:
Q  133 caaaacaacaacaacatctcatttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatc 232  Q
    |||| |||||||||||  | ||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||| ||||||||||||||||| ||||     
T  33314500 caaaccaacaacaacaatttatttctcatcatcaatccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacatt 33314401  T
Q  233 aatggaatatgaat 246  Q
    ||||||||||||||    
T  33314400 aatggaatatgaat 33314387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 29665802 - 29665947
Alignment:
Q  68 aaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccattttctcaaaacaacaacaacatctcatttctcatcatcaa 167  Q
    ||||||||||| |||||||||| | ||||||| |||  ||||||||||||||| || |||||| ||||||||||||||||| ||  |||||||||| |||    
T  29665802 aaatccatataaaaacttgaattaaacatcatcttag-caaaaatcaccatttaactcattttatcaaaacaacaacaacaacttgtttctcatcaccaa 29665900  T
Q  168 tccacaatgaagtatacctaaatcatgattcactcacaataacatca 214  Q
    ||||  |  | | ||||| || ||||||||||| ||||| |||||||    
T  29665901 tccatgaatatgcatacccaagtcatgattcacccacaacaacatca 29665947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 224 - 296
Target Start/End: Complemental strand, 13620985 - 13620913
Alignment:
Q  224 aacaacatcaatggaatatgaattgcatctcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    ||||||||||||   |||||| || |||||||||| |||||||||||||||||||||||||||||||||||||    
T  13620985 aacaacatcaattacatatgatttacatctcatttcaatcaaaacatatcaaatttcatcaattaagtataat 13620913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 224 - 296
Target Start/End: Original strand, 16231957 - 16232029
Alignment:
Q  224 aacaacatcaatggaatatgaattgcatctcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    ||||||||||||   |||||| || |||||||||| |||||||||||||||||||||||||||||||||||||    
T  16231957 aacaacatcaattacatatgatttacatctcatttcaatcaaaacatatcaaatttcatcaattaagtataat 16232029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 224 - 296
Target Start/End: Complemental strand, 18087014 - 18086942
Alignment:
Q  224 aacaacatcaatggaatatgaattgcatctcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    ||||||||||||   |||||| || |||||||||| |||||||||||||||||||||||||||||||||||||    
T  18087014 aacaacatcaattacatatgatttacatctcatttcaatcaaaacatatcaaatttcatcaattaagtataat 18086942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 52 - 169
Target Start/End: Complemental strand, 16300342 - 16300227
Alignment:
Q  52 acatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccattttctcaaaacaacaacaacatct 151  Q
    ||||||||| ||||| || | ||||||   |||||||||| |||||||||||| | |||||||||||||||||||||||  |||||||||  ||||||||    
T  16300342 acatgaaaagacactcaattacatataatcacttgaatcaaacatcattttaaaccaaaatcaccatttgacccatttttgcaaaacaac--caacatct 16300245  T
Q  152 catttctcatcatcaatc 169  Q
     |||| |||||| |||||    
T  16300244 tatttttcatcaacaatc 16300227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 224 - 296
Target Start/End: Original strand, 23977834 - 23977906
Alignment:
Q  224 aacaacatcaatggaatatgaattgcatctcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    ||||||||||||   |||||| || |||||||||| || ||||||||||||||||||||||||||||||||||    
T  23977834 aacaacatcaattacatatgatttacatctcatttcaaccaaaacatatcaaatttcatcaattaagtataat 23977906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 82 - 169
Target Start/End: Complemental strand, 32277096 - 32277009
Alignment:
Q  82 acttgaatcacacatcattttaatcaaaaatcaccatttgacccattttctcaaaacaa-caacaacatctcatttctcatcatcaatc 169  Q
    |||||||||| |||||||||||| ||||| |||||||||||||||||||  |||||||| ||||| ||||| |||||||| || |||||    
T  32277096 acttgaatcaaacatcattttaaacaaaa-tcaccatttgacccatttttgcaaaacaaccaacagcatcttatttctcaccaacaatc 32277009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 173; Significance: 5e-93; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 40 - 296
Target Start/End: Original strand, 7425207 - 7425461
Alignment:
Q  40 aaatgtttttagacatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccattttctcaaaaca 139  Q
    |||||||| |||||||||||| ||||| || ||||||||||||||||||||| |||||||||||| ||||| ||| |||| |||||||||||||||||||    
T  7425207 aaatgtttatagacatgaaaagacactcaattccatatacaaacttgaatcaaacatcattttaaacaaaa-tcatcatt-gacccattttctcaaaaca 7425304  T
Q  140 acaacaacatctcatttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaa 239  Q
    |||||||||||||||||||||||||||||||| ||| ||||||| | || ||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  7425305 acaacaacatctcatttctcatcatcaatccataattaagtatatccaagtcatgattcactcacaacagcatcagttaacaataacaacatcaatggaa 7425404  T
Q  240 tatgaattgcatctcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||    
T  7425405 tatgaattacatctcatttcaatcaaaacatatcaaatttcatcaatgaagtataat 7425461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 29 - 298
Target Start/End: Complemental strand, 35791483 - 35791215
Alignment:
Q  29 aaggtttacccaaatgtttttagacatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccatt 128  Q
    |||||||| ||||||||||||||||||||||| | ||| |||||||||||||||||||||||| |||||||||||| ||||  |||||||||||||||||    
T  35791483 aaggtttatccaaatgtttttagacatgaaaagatactcaaatccatatacaaacttgaatcaaacatcattttaaacaaa--tcaccatttgacccatt 35791386  T
Q  129 ttctcaaaacaacaacaacatctcatttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaa 228  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||| || |||| |||||| | ||| |||||||||||| |  |||||    
T  35791385 ttctcaaaacaacaacaacatctcatttctcatcatcaatccataattatgtatacccaagtcataattcaccctcaacaacatcagttaatagcaacaa 35791286  T
Q  229 catcaatggaatatgaattgcatctcattttaatcaaaacatatc-aaatttcatcaattaagtataatct 298  Q
    ||||||||||| ||||||  |||||||||| ||  | |||||||| |||||||||||||||||||||||||    
T  35791285 catcaatggaacatgaatcacatctcatttcaacaacaacatatcaaaatttcatcaattaagtataatct 35791215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 153 - 296
Target Start/End: Complemental strand, 1219782 - 1219639
Alignment:
Q  153 atttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatc 252  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||  ||||    
T  1219782 atttctcatcatcaatccacaattaagtatacccaaatcatgattcactcacaatagcatcagttaacaataaccacatcaatgaaatatgaatcacatc 1219683  T
Q  253 tcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    |||||| ||||||||||||||||||||||||||||||| |||||    
T  1219682 tcatttcaatcaaaacatatcaaatttcatcaattaagcataat 1219639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 52 - 258
Target Start/End: Complemental strand, 11212427 - 11212222
Alignment:
Q  52 acatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccattttctcaaaacaacaacaacatct 151  Q
    ||||||||| ||||| || |||||||| |||||||||| | || ||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||    
T  11212427 acatgaaaagacactcaattccatataaaaacttgaattaaacttcattttaaacaaaa-tcaccatttgacccattttcacaaaacaacaacaacatct 11212329  T
Q  152 catttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcat 251  Q
    |||||||||||||||||||| ||| | ||||||| || |||| || ||| ||||| |||||||||||| |  |||||||||||||||| ||||||  |||    
T  11212328 catttctcatcatcaatccataattatgtatacccaagtcataatccacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacat 11212229  T
Q  252 ctcattt 258  Q
    |||||||    
T  11212228 ctcattt 11212222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 29 - 212
Target Start/End: Original strand, 23328427 - 23328611
Alignment:
Q  29 aaggtttacccaaatgtttttagacatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccatt 128  Q
    |||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||| |||| ||||||| | ||||||| |||||||||||||    
T  23328427 aaggtttacccaaatgtttttagacatgaaaagatactcaaatccatatacaaacttgaatcaaacattattttaaac-aaaatcatcatttgacccatt 23328525  T
Q  129 ttctcaaaacaacaacaacatctc--atttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacat 212  Q
    ||||||||||||||||||||| ||   ||| |||||||||||||||||| ||||||||| || | || |||||||||||| |||||    
T  23328526 ttctcaaaacaacaacaacatttcgtttttttcatcatcaatccacaattaagtatacccaagttataattcactcacaacaacat 23328611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 153 - 296
Target Start/End: Complemental strand, 22883346 - 22883203
Alignment:
Q  153 atttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatc 252  Q
    ||||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||| ||||||||||||||||| |||| ||||||||||||||  ||||    
T  22883346 atttctcatcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatc 22883247  T
Q  253 tcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    || ||| ||||||||||||||||||||||||||||||| |||||    
T  22883246 tcttttcaatcaaaacatatcaaatttcatcaattaagcataat 22883203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 153 - 296
Target Start/End: Original strand, 35582030 - 35582173
Alignment:
Q  153 atttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatc 252  Q
    ||||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||| ||||||||||||||||| |||| ||||||||||||||  ||||    
T  35582030 atttctcatcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatc 35582129  T
Q  253 tcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    || ||| ||||||| ||||||||||||||||||||||| |||||    
T  35582130 tcttttcaatcaaagcatatcaaatttcatcaattaagcataat 35582173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 153 - 296
Target Start/End: Complemental strand, 36990032 - 36989889
Alignment:
Q  153 atttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatc 252  Q
    ||||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||| ||||||||||||||||| |||| ||||||||||||||  ||||    
T  36990032 atttctcatcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatc 36989933  T
Q  253 tcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    || ||| ||||||| ||||||||||||||||||||||| |||||    
T  36989932 tcttttcaatcaaagcatatcaaatttcatcaattaagcataat 36989889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 29 - 212
Target Start/End: Original strand, 24616039 - 24616216
Alignment:
Q  29 aaggtttacccaaatgtttttagacatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccatt 128  Q
    |||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||  |||| ||||||| ||||| |||||||||||||||||    
T  24616039 aaggtttacccaaatgtttttagacatgaaaagatactcaaatccatatacaaacttgaatcgaacataattttaaacaaaa-tcaccatttgacccatt 24616137  T
Q  129 ttctcaaaacaacaacaacatctcatttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacat 212  Q
    |||||||||||||||||   | |||||| |  ||||||||||||||| ||||||||| || | || |||||||||||| |||||    
T  24616138 ttctcaaaacaacaaca---tttcattttt--tcatcaatccacaattaagtatacccaagttataattcactcacaacaacat 24616216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 29 - 212
Target Start/End: Original strand, 24712415 - 24712592
Alignment:
Q  29 aaggtttacccaaatgtttttagacatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccatt 128  Q
    |||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||  |||| ||||||| ||||| |||||||||||||||||    
T  24712415 aaggtttacccaaatgtttttagacatgaaaagatactcaaatccatatacaaacttgaatcgaacataattttaaacaaaa-tcaccatttgacccatt 24712513  T
Q  129 ttctcaaaacaacaacaacatctcatttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacat 212  Q
    |||||||||||||||||   | |||||| |  ||||||||||||||| ||||||||| || | || |||||||||||| |||||    
T  24712514 ttctcaaaacaacaaca---tttcattttt--tcatcaatccacaattaagtatacccaagttataattcactcacaacaacat 24712592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 29 - 212
Target Start/End: Original strand, 24745433 - 24745610
Alignment:
Q  29 aaggtttacccaaatgtttttagacatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccatt 128  Q
    |||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||  |||| ||||||| ||||| |||||||||||||||||    
T  24745433 aaggtttacccaaatgtttttagacatgaaaagatactcaaatccatatacaaacttgaatcgaacataattttaaacaaaa-tcaccatttgacccatt 24745531  T
Q  129 ttctcaaaacaacaacaacatctcatttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacat 212  Q
    |||||||||||||||||   | |||||| |  ||||||||||||||| ||||||||| || | || |||||||||||| |||||    
T  24745532 ttctcaaaacaacaaca---tttcattttt--tcatcaatccacaattaagtatacccaagttataattcactcacaacaacat 24745610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 192 - 296
Target Start/End: Complemental strand, 17471811 - 17471707
Alignment:
Q  192 atgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatctcattttaatcaaaacatatcaaatttcatcaattaagt 291  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||    
T  17471811 atgattcattcacaataacatcagttaacaataacaacatcaatggaatatgaattacatcttatttcaatcaaaacatatcaaatttcatcaattaagt 17471712  T
Q  292 ataat 296  Q
    |||||    
T  17471711 ataat 17471707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 153 - 296
Target Start/End: Complemental strand, 21932643 - 21932500
Alignment:
Q  153 atttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatc 252  Q
    ||||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||  ||||||||||||||||| |||| ||||||||||||||  ||||    
T  21932643 atttctcatcatcaatccacaattaagtatacccaaatcataattcacttacaatggcatcagttaacaataaccacattaatggaatatgaatcacatc 21932544  T
Q  253 tcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    || ||| ||||||| ||||||||||||||||||||||| |||||    
T  21932543 tcttttcaatcaaagcatatcaaatttcatcaattaagcataat 21932500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 153 - 296
Target Start/End: Complemental strand, 21938813 - 21938670
Alignment:
Q  153 atttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatc 252  Q
    ||||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||  ||||||||||||||||| |||| ||||||||||||||  ||||    
T  21938813 atttctcatcatcaatccacaattaagtatacccaaatcataattcacttacaatggcatcagttaacaataaccacattaatggaatatgaatcacatc 21938714  T
Q  253 tcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    || ||| ||||||| ||||||||||||||||||||||| |||||    
T  21938713 tcttttcaatcaaagcatatcaaatttcatcaattaagcataat 21938670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 54 - 246
Target Start/End: Original strand, 32950590 - 32950780
Alignment:
Q  54 atgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccattttctcaaaacaacaacaacatctca 153  Q
    ||||||| ||||| || ||||| || |||||||||| | ||||||| |||    ||||||||||||| || |||||| ||||||||| |||||||||| |    
T  32950590 atgaaaagacactcaagtccatgtataaacttgaattaaacatcatcttagc--aaaatcaccatttaactcattttatcaaaacaataacaacatctta 32950687  T
Q  154 tttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaat 246  Q
    ||||||||| ||||||||  |  | | | ||| || ||||||||||| ||||| |||||||||||| |  | |||||||||||||| ||||||    
T  32950688 tttctcatcttcaatccatgaatatgcagacccaagtcatgattcacccacaacaacatcagttaatagcatcaacatcaatggaacatgaat 32950780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 224 - 296
Target Start/End: Original strand, 23514626 - 23514698
Alignment:
Q  224 aacaacatcaatggaatatgaattgcatctcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    ||||||||||||   |||||| || |||||||||| |||||||||||||||||||||||||||||||||||||    
T  23514626 aacaacatcaattacatatgatttacatctcatttcaatcaaaacatatcaaatttcatcaattaagtataat 23514698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 52 - 169
Target Start/End: Original strand, 17909397 - 17909515
Alignment:
Q  52 acatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccattttctcaaaacaa-caacaacatc 150  Q
    ||||||||| ||||| || | ||||||   |||||||||| ||||||| |||| | |||||||||||||||||||||||  |||||||| ||||||||||    
T  17909397 acatgaaaagacactcaattacatataatcacttgaatcaaacatcatcttaaaccaaaatcaccatttgacccatttttgcaaaacaaccaacaacatc 17909496  T
Q  151 tcatttctcatcatcaatc 169  Q
    | |||||||| || |||||    
T  17909497 ttatttctcaccaccaatc 17909515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 82 - 153
Target Start/End: Original strand, 7528821 - 7528893
Alignment:
Q  82 acttgaatcacacatcattttaatcaaaaatcaccatttgacccattttctcaaaacaa-caacaacatctca 153  Q
    |||||||||| |||||||||||| | |||||||||||||||||||||||  |||||||| |||||||||||||    
T  7528821 acttgaatcaaacatcattttaaaccaaaatcaccatttgacccatttttgcaaaacaaccaacaacatctca 7528893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 224 - 296
Target Start/End: Complemental strand, 10778161 - 10778089
Alignment:
Q  224 aacaacatcaatggaatatgaattgcatctcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    ||||||||||||   |||||| || |||||||||| ||||||||||||||||||||||||||||||| |||||    
T  10778161 aacaacatcaattacatatgatttacatctcatttcaatcaaaacatatcaaatttcatcaattaagcataat 10778089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 163; Significance: 4e-87; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 29 - 295
Target Start/End: Complemental strand, 34543 - 34278
Alignment:
Q  29 aaggtttacccaaatgtttttagacatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccatt 128  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||| ||||| |||||||||||||||||    
T  34543 aaggtttacccaaatgtttttagacatgaaaatacacttgaatccatatacaaacttgaatcaatcatcattttaaacaaaa-tcaccatttgacccatt 34445  T
Q  129 ttctcaaaacaacaacaacatctcatttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaa 228  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||  |||||||| || ||||||||||||||||||| |||||||||| |  |||||    
T  34444 ttctcaaaacaacaacaacatctcatttctcatcatcaatccataatttagtatacccaagtcatgattcactcacaatagcatcagttaatagcaacaa 34345  T
Q  229 catcaatggaatatgaattgcatctcattttaatcaaaacatatcaaatttcatcaattaagtataa 295  Q
    ||| ||||||| ||||||   ||||||||| ||  | |||||||| || ||||||||||||||||||    
T  34344 cattaatggaacatgaatcatatctcatttcaacaacaacatatccaaattcatcaattaagtataa 34278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 161; Significance: 7e-86; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 44 - 296
Target Start/End: Complemental strand, 15287614 - 15287364
Alignment:
Q  44 gtttttagacatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccattttctcaaaacaacaa 143  Q
    |||| |||||||||||| ||||| || ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||||||||||||||||  |||||    
T  15287614 gtttctagacatgaaaagacactcaattccatatacaaacttgaatcaaacatcattttaaacaaaa-tcatcatt-gacccattttctcaaagaaacaa 15287517  T
Q  144 caacatctcatttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatg 243  Q
    |||||||||||||||||||||||||||| ||| ||||||||| || ||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  15287516 caacatctcatttctcatcatcaatccataattaagtatacccaagtcatgattcactcacaacagcatcagttaacaataacaacatcaatggaatatg 15287417  T
Q  244 aattgcatctcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    |||| |||||||||| |||||||||||||||||||||||||||  ||||||||    
T  15287416 aattacatctcatttcaatcaaaacatatcaaatttcatcaatggagtataat 15287364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 44 - 296
Target Start/End: Complemental strand, 15294723 - 15294473
Alignment:
Q  44 gtttttagacatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccattttctcaaaacaacaa 143  Q
    |||| |||||||||||| ||||| || ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||||||||||||||||  |||||    
T  15294723 gtttctagacatgaaaagacactcaattccatatacaaacttgaatcaaacatcattttaaacaaaa-tcatcatt-gacccattttctcaaagaaacaa 15294626  T
Q  144 caacatctcatttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatg 243  Q
    |||||||||||||||||||||||||||| ||| ||||||||| || ||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  15294625 caacatctcatttctcatcatcaatccataattaagtatacccaagtcatgattcactcacaacagcatcagttaacaataacaacatcaatggaatatg 15294526  T
Q  244 aattgcatctcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    |||| |||||||||| |||||||||||||||||||||||||||  ||||||||    
T  15294525 aattacatctcatttcaatcaaaacatatcaaatttcatcaatggagtataat 15294473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 52 - 296
Target Start/End: Original strand, 19020379 - 19020623
Alignment:
Q  52 acatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccattttctcaaaacaac-aacaacatc 150  Q
    ||||||||| ||||| ||||||||||| |||||||||| | || ||||||||| ||||| ||| |||||||||||||||  ||||||||| |||||||||    
T  19020379 acatgaaaagacactcaaatccatataaaaacttgaattaaacttcattttaaacaaaa-tcatcatttgacccatttttgcaaaacaaccaacaacatc 19020477  T
Q  151 tcatttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgca 250  Q
    | ||||||||||||||||||||||| ||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||    
T  19020478 ttatttctcatcatcaatccacaattaagtatactcaaatcatgattcactcacaatagcatcagttaacaataacaacatcaatggaatatgaattaca 19020577  T
Q  251 tctcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    |||||||| |||||||||||||||||||||||| |||||| |||||    
T  19020578 tctcatttcaatcaaaacatatcaaatttcatccattaaggataat 19020623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 29 - 296
Target Start/End: Original strand, 18248089 - 18248355
Alignment:
Q  29 aaggtttacccaaatgtttttagacatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccatt 128  Q
    |||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||    
T  18248089 aaggtttacccaaatgtttttagacatgaaaagatactcaaatccatatacaaacttgaatcaaacatcattttaaacaaaa-tcaccatttgacccatt 18248187  T
Q  129 ttctcaaaacaacaacaacatctcatttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaa 228  Q
    |||||||||||||||||||||||||||| |||||||||||| | ||| | ||||||| || |||| |||||| ||||| |||||||||||| |  |||||    
T  18248188 ttctcaaaacaacaacaacatctcatttttcatcatcaatcgataattatgtataccaaagtcataattcacccacaacaacatcagttaatagcaacaa 18248287  T
Q  229 catcaatggaatatgaattgcatctcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    ||||||||||| ||||||  |||||||||| ||  | ||||||| ||| ||||  |||| ||||||||    
T  18248288 catcaatggaacatgaatcacatctcatttcaacaacaacatattaaaattcactaattgagtataat 18248355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 29 - 296
Target Start/End: Original strand, 8374379 - 8374645
Alignment:
Q  29 aaggtttacccaaatgtttttagacatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccatt 128  Q
    |||||||||||||||| ||||||||||||||| | ||| |||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||    
T  8374379 aaggtttacccaaatggttttagacatgaaaagatactcaaatccatatacaaacttgaatcaaacatcattttaaacaaaa-tcaccatttgacccatt 8374477  T
Q  129 ttctcaaaacaacaacaacatctcatttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaa 228  Q
    |||||||||||||||||||||||||||| |||||||||||| | ||| | ||||||| ||  ||| |||||| ||||| |||||||||||| |  |||||    
T  8374478 ttctcaaaacaacaacaacatctcatttttcatcatcaatcgataattatgtatacccaagccataattcacccacaacaacatcagttaatagcaacaa 8374577  T
Q  229 catcaatggaatatgaattgcatctcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    ||||||||||| ||||||  |||||||||| ||  | ||||||| ||| ||||  |||| ||||||||    
T  8374578 catcaatggaacatgaatcacatctcatttcaacaacaacatattaaaattcactaattgagtataat 8374645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 29 - 212
Target Start/End: Complemental strand, 22352431 - 22352249
Alignment:
Q  29 aaggtttacccaaatgtttttagacatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccatt 128  Q
    |||||||||||||||||||||||||||||||| | ||| |||| ||||||||||||||||||| |||||||||||| ||||  |||||||||||||||||    
T  22352431 aaggtttacccaaatgtttttagacatgaaaagatactcaaattcatatacaaacttgaatcaaacatcattttaaacaaac-tcaccatttgacccatt 22352333  T
Q  129 ttctcaaaacaacaacaacatctcatttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacat 212  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| || | || |||||||||||| |||||    
T  22352332 ttctcaaaacaacaacaacatctcatttctcatcatcaatccataattaagtatacccaagttataattcactcacaacaacat 22352249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 52 - 296
Target Start/End: Complemental strand, 17146019 - 17145776
Alignment:
Q  52 acatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccattttctcaaaacaacaacaacatct 151  Q
    ||||||||| ||||| || || ||||| |||||||||| | || ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  17146019 acatgaaaagacactcaattctatataaaaacttgaattaaacttcattttaaacaaaa-tcaccatttgacccattttctcaaaacaacaacaacatct 17145921  T
Q  152 catttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcat 251  Q
    ||||| |||||||||||||  ||| | ||||||| || |||| |||||| ||||| |||||||||||| |  |||||||||||||||| ||||||  |||    
T  17145920 catttttcatcatcaatccgtaattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacat 17145821  T
Q  252 ctcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    ||||||| ||  | ||||||||||| ||||  |||| ||||||||    
T  17145820 ctcatttcaacaacaacatatcaaaattcactaattgagtataat 17145776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 153 - 296
Target Start/End: Original strand, 18168964 - 18169107
Alignment:
Q  153 atttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatc 252  Q
    |||||||||||||||| |||||| ||||||| | |||||||||||||||||||||| ||| | ||||||||||| |||||||||||||||||||  ||||    
T  18168964 atttctcatcatcaattcacaattaagtatatccaaatcatgattcactcacaatagcattatttaacaataaccacatcaatggaatatgaatcacatc 18169063  T
Q  253 tcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    |||||| ||||||||||||||||||||||||||||||| |||||    
T  18169064 tcatttcaatcaaaacatatcaaatttcatcaattaagcataat 18169107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 29 - 212
Target Start/End: Original strand, 26338892 - 26339073
Alignment:
Q  29 aaggtttacccaaatgtttttagacatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccatt 128  Q
    ||||||||||||||||||||||||||||||||   ||| |||||||||||||||||||| ||| |||||||||||| | ||||||| || ||||||||||    
T  26338892 aaggtttacccaaatgtttttagacatgaaaaggtactcaaatccatatacaaacttgattcaaacatcattttaaac-aaaatcatca-ttgacccatt 26338989  T
Q  129 ttctcaaaacaacaacaacatctcatttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacat 212  Q
    ||||||||||||||||||||| |||||| ||||||| |||||| ||| ||||||||| || | || |||||||||||| |||||    
T  26338990 ttctcaaaacaacaacaacatttcatttttcatcattaatccataattaagtatacccaagttataattcactcacaacaacat 26339073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 29 - 200
Target Start/End: Original strand, 22738142 - 22738310
Alignment:
Q  29 aaggtttacccaaatgtttttagacatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccatt 128  Q
    |||||||||||||||||||||||||||||||| | ||||||| ||| ||| |||||||||||| ||| || ||| | |||||  || |||||||||||||    
T  22738142 aaggtttacccaaatgtttttagacatgaaaagatacttaaa-ccaaatataaacttgaatcaaacagcaatttgaacaaaa--cagcatttgacccatt 22738238  T
Q  129 ttctcaaaacaacaacaacatctcatttctcatcatcaatccacaatgaagtatacctaaatcatgattcac 200  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||| || |||| ||||||    
T  22738239 ttctgaaaacaacaacaacatctcatttctcatcattaatccacaattaagtatacccaagtcataattcac 22738310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 224 - 296
Target Start/End: Complemental strand, 7132256 - 7132184
Alignment:
Q  224 aacaacatcaatggaatatgaattgcatctcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    ||||||||||||   |||||| || |||||||||| |||||||||||||||||||||||||||||||||||||    
T  7132256 aacaacatcaattacatatgatttacatctcatttcaatcaaaacatatcaaatttcatcaattaagtataat 7132184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 52 - 169
Target Start/End: Original strand, 14996019 - 14996137
Alignment:
Q  52 acatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccattttctcaaaacaa-caacaacatc 150  Q
    ||||||||| ||||| |||| ||||||   |||||||||| | ||||| |||| | |||||||||||||||||||||||  |||||||| ||||||||||    
T  14996019 acatgaaaagacactcaaatacatataatcacttgaatcaaatatcatcttaaaccaaaatcaccatttgacccatttttgcaaaacaaccaacaacatc 14996118  T
Q  151 tcatttctcatcatcaatc 169  Q
    | |||||||| || |||||    
T  14996119 ttatttctcaccaacaatc 14996137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 82 - 169
Target Start/End: Complemental strand, 32461011 - 32460923
Alignment:
Q  82 acttgaatcacacatcattttaatcaaaaatcaccatttgacccattttctcaaaacaa-caacaacatctcatttctcatcatcaatc 169  Q
    |||||||||| |||||||||||| | |||||||| ||||||||||||||  |||||||| ||||||||||||| |||||| || |||||    
T  32461011 acttgaatcaaacatcattttaaaccaaaatcactatttgacccatttttgcaaaacaaccaacaacatctcaattctcaccaacaatc 32460923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 169
Target Start/End: Complemental strand, 19697736 - 19697618
Alignment:
Q  52 acatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccattttctcaaaacaa-caacaacatc 150  Q
    ||||||||| ||||| || | ||||||   |||| ||||| ||||||| |||| | |||||||||||||||||||||||  |||||||| ||||||||||    
T  19697736 acatgaaaagacactcaattacatataatcacttaaatcaaacatcatcttaaaccaaaatcaccatttgacccatttttgcaaaacaaccaacaacatc 19697637  T
Q  151 tcatttctcatcatcaatc 169  Q
    | |||||||| || |||||    
T  19697636 ttatttctcaccaacaatc 19697618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 169
Target Start/End: Complemental strand, 19708321 - 19708203
Alignment:
Q  52 acatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccattttctcaaaacaa-caacaacatc 150  Q
    ||||||||| ||||| || | ||||||   |||| ||||| ||||||| |||| | |||||||||||||||||||||||  |||||||| ||||||||||    
T  19708321 acatgaaaagacactcaattacatataatcacttaaatcaaacatcatcttaaaccaaaatcaccatttgacccatttttgcaaaacaaccaacaacatc 19708222  T
Q  151 tcatttctcatcatcaatc 169  Q
    | |||||||| || |||||    
T  19708221 ttatttctcaccaacaatc 19708203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 20000803 - 20000860
Alignment:
Q  239 atatgaattgcatctcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    |||||| || |||||||||| || ||||||||||||||||||||||||||||||||||    
T  20000803 atatgatttacatctcatttcaaccaaaacatatcaaatttcatcaattaagtataat 20000860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 168
Target Start/End: Original strand, 8044861 - 8044949
Alignment:
Q  82 acttgaatcacacatcattttaatca-aaaatcaccatttgacccattttctcaaaacaac-aacaacatctcatttctcatcatcaat 168  Q
    |||||||| | |||||||||||| |  ||||||| ||||| ||||||| |  ||||||||| |||||||||| ||||||||||| ||||    
T  8044861 acttgaattaaacatcattttaaacccaaaatcatcattttacccattattgcaaaacaaccaacaacatcttatttctcatcaacaat 8044949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 136; Significance: 6e-71; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 29 - 296
Target Start/End: Complemental strand, 7841 - 7575
Alignment:
Q  29 aaggtttacccaaatgtttttagacatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccatt 128  Q
    |||||||||||||||||||||||||||||| | | ||| |||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||    
T  7841 aaggtttacccaaatgtttttagacatgaagagatactcaaatccatatacaaacttgaatcaaacatcattttaaacaaaa-tcaccatttgacccatt 7743  T
Q  129 ttctcaaaacaacaacaacatctcatttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaa 228  Q
    ||||||||||| |||||||||||||||| |||||||||||||| ||| | ||||||| || |||| |||||||||||| |||||||||||| || || ||    
T  7742 ttctcaaaacatcaacaacatctcatttttcatcatcaatccataattatgtatacccaagtcataattcactcacaacaacatcagttaataacaataa 7643  T
Q  229 catcaatggaatatgaattgcatctcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    | | ||||||| ||||||  |||||||||||||  | ||||||||||  ||||  |||| ||||||||    
T  7642 ccttaatggaacatgaatcacatctcattttaacaacaacatatcaagattcactaattgagtataat 7575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 124; Significance: 8e-64; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 29 - 212
Target Start/End: Original strand, 7081 - 7263
Alignment:
Q  29 aaggtttacccaaatgtttttagacatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccatt 128  Q
    |||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||    
T  7081 aaggtttacccaaatgtttttagacatgaaaagatactcaaatccatatacaaacttgaatcaaacatcattttaaacaaaa-tcaccatttgacccatt 7179  T
Q  129 ttctcaaaacaacaacaacatctcatttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacat 212  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||| | ||||||| || |||| |||||||||||| |||||    
T  7180 ttctcaaaacaacaacaacatctcatttttcatcatcaatccataattatgtatacccaagtcataattcactcacaacaacat 7263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 120; Significance: 2e-61; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 29 - 212
Target Start/End: Original strand, 22035319 - 22035501
Alignment:
Q  29 aaggtttacccaaatgtttttagacatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccatt 128  Q
    |||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||| |||| ||||||| ||||| |||||||||||||||||    
T  22035319 aaggtttacccaaatgtttttagacatgaaaagatactcaaatccatatacaaacttgaatcaaacattattttaaacaaaa-tcaccatttgacccatt 22035417  T
Q  129 ttctcaaaacaacaacaacatctcatttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacat 212  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||| || | || |||||||||||| |||||    
T  22035418 ttctcaaaacaacaacaacatctcatttttcatcatcaatccataattaagtatacccaagttataattcactcacaacaacat 22035501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 29 - 212
Target Start/End: Complemental strand, 7641318 - 7641136
Alignment:
Q  29 aaggtttacccaaatgtttttagacatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccatt 128  Q
    ||||||||||||||||||||||||||| || | | ||| |||||||||||||||||||||| | |||||||||||| ||||| |||||||||||||||||    
T  7641318 aaggtttacccaaatgtttttagacataaagagatactcaaatccatatacaaacttgaattaaacatcattttaaacaaaa-tcaccatttgacccatt 7641220  T
Q  129 ttctcaaaacaacaacaacatctcatttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacat 212  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||| ||||| ||| || | || |||||||||||| |||||    
T  7641219 ttctcaaaacaacaacaacatctcatttttcatcatcaatccataattaagtacacccaagttataattcactcacaacaacat 7641136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 153 - 296
Target Start/End: Complemental strand, 18060020 - 18059877
Alignment:
Q  153 atttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatc 252  Q
    ||||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||| |||||||| |||||||| |||||||||||||||||||  ||||    
T  18060020 atttctcatcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttgacaataaccacatcaatggaatatgaatcacatc 18059921  T
Q  253 tcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    |||||| ||||||||||||||||||||||||||||||| |||||    
T  18059920 tcatttcaatcaaaacatatcaaatttcatcaattaagcataat 18059877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 164 - 296
Target Start/End: Original strand, 46523394 - 46523526
Alignment:
Q  164 tcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatctcattttaatc 263  Q
    |||||||| ||| ||||||||| || ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  46523394 tcaatccataattaagtatacccaagtcatgattcactcacaacagcatcagttaacaataacaacatcaatggaatatgaattacatctcatttcaatc 46523493  T
Q  264 aaaacatatcaaatttcatcaattaagtataat 296  Q
    ||||||||||||||||||||||| |||||||||    
T  46523494 aaaacatatcaaatttcatcaatgaagtataat 46523526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 153 - 296
Target Start/End: Complemental strand, 38055353 - 38055210
Alignment:
Q  153 atttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatc 252  Q
    ||||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||| ||||||||||||||||| |||| ||||||||||||||  ||||    
T  38055353 atttctcatcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatc 38055254  T
Q  253 tcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    || ||| ||||||||||||||||||||||||||||||| |||||    
T  38055253 tcttttcaatcaaaacatatcaaatttcatcaattaagcataat 38055210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 153 - 296
Target Start/End: Original strand, 17004632 - 17004775
Alignment:
Q  153 atttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatc 252  Q
    ||||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||| ||||||||||||||||| |||| ||||||||||||||  ||||    
T  17004632 atttctcatcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatc 17004731  T
Q  253 tcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    || ||| ||||||| ||||||||||||||||||||||| |||||    
T  17004732 tcttttcaatcaaagcatatcaaatttcatcaattaagcataat 17004775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 29 - 130
Target Start/End: Original strand, 20254209 - 20254309
Alignment:
Q  29 aaggtttacccaaatgtttttagacatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccatt 128  Q
    |||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||| ||||||||| || | |||||||||||||||||||||    
T  20254209 aaggtttacccaaatgtttttagacatgaaaagatactcaaatccatatacaaacttgaatcaaacatcatttcaaac-aaaatcaccatttgacccatt 20254307  T
Q  129 tt 130  Q
    ||    
T  20254308 tt 20254309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 224 - 296
Target Start/End: Original strand, 17148632 - 17148704
Alignment:
Q  224 aacaacatcaatggaatatgaattgcatctcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    ||||||||||||   |||||| || |||||||||| ||||||| |||||||||||||||||||||||||||||    
T  17148632 aacaacatcaattacatatgatttacatctcatttcaatcaaagcatatcaaatttcatcaattaagtataat 17148704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 52 - 130
Target Start/End: Original strand, 20822524 - 20822601
Alignment:
Q  52 acatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccatttt 130  Q
    ||||||||| ||||| ||||||||||| || || ||| || ||||||||| || |||||||||||||||||||||||||    
T  20822524 acatgaaaagacactcaaatccatataaaatctagaaccaaacatcatttcaa-caaaaatcaccatttgacccatttt 20822601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 156
Target Start/End: Complemental strand, 9784455 - 9784353
Alignment:
Q  52 acatgaaaatacacttaaatccatat-acaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccattttctcaaaacaacaacaacatc 150  Q
    ||||||||| ||||| |||||||||| | |||||||||||| ||||| |||| || |||||||||| |||||| |||||||  |||||| |||||||| |    
T  9784455 acatgaaaagacactcaaatccatataagaaacttgaatcaaacatc-ttttcat-aaaaatcaccgtttgactcattttc-aaaaacatcaacaacaac 9784359  T
Q  151 tcattt 156  Q
    ||||||    
T  9784358 tcattt 9784353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 130
Target Start/End: Original strand, 20836356 - 20836433
Alignment:
Q  52 acatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccatttt 130  Q
    ||||||||| |||||  |||||||||| || || ||| || ||||||||| || ||||||||||||| |||||||||||    
T  20836356 acatgaaaagacactcgaatccatataaaatctagaaccaaacatcatttcaa-caaaaatcaccatctgacccatttt 20836433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 29 - 212
Target Start/End: Original strand, 6468 - 6651
Alignment:
Q  29 aaggtttacccaaatgtttttagacatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccatt 128  Q
    |||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||| |||| ||||||| | |||||||||||||||||||||    
T  6468 aaggtttacccaaatgtttttagacatgaaaagatactcaaatccatatacaaacttgaatcaaacattattttaaac-aaaatcaccatttgacccatt 6566  T
Q  129 ttctcaaaacaacaacaacatctca-tttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacat 212  Q
    ||||||||||||||||||||| ||| ||| |||||||||||||||||| ||||||||| || | || |||||||||||| |||||    
T  6567 ttctcaaaacaacaacaacatttcattttttcatcatcaatccacaattaagtatacccaagttataattcactcacaacaacat 6651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 112; Significance: 1e-56; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 153 - 296
Target Start/End: Complemental strand, 22006520 - 22006377
Alignment:
Q  153 atttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatc 252  Q
    |||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||    
T  22006520 atttctcatcatcagtccacaattaagtatacccaaatcatgattcactcacaataacatcagttaacaataaccacatcaatggaatatgaatcacatc 22006421  T
Q  253 tcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    |||||| ||||||||||||||||||||||||||||||| |||||    
T  22006420 tcatttcaatcaaaacatatcaaatttcatcaattaagcataat 22006377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 155 - 296
Target Start/End: Complemental strand, 13662525 - 13662384
Alignment:
Q  155 ttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatctc 254  Q
    ||||||||||||||||| ||| | ||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||  ||||||    
T  13662525 ttctcatcatcaatccataattatgtatacccaaatcatgattcactcacaatagcatcagttaacaataaccacatcaatggaatatgaatcacatctc 13662426  T
Q  255 attttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    |||| ||||||||||||||||||||||||||||||| |||||    
T  13662425 atttcaatcaaaacatatcaaatttcatcaattaagcataat 13662384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 153 - 296
Target Start/End: Complemental strand, 22089056 - 22088913
Alignment:
Q  153 atttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatc 252  Q
    ||||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||| ||||||||||||||||| |||| ||||||||||||||  ||||    
T  22089056 atttctcatcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatc 22088957  T
Q  253 tcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    || ||| ||||||||||||||||||||||||||||||| |||||    
T  22088956 tcttttcaatcaaaacatatcaaatttcatcaattaagcataat 22088913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 153 - 296
Target Start/End: Complemental strand, 271622 - 271479
Alignment:
Q  153 atttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatc 252  Q
    ||||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||| ||||||||||||||||| |||| ||||||||||||||  ||||    
T  271622 atttctcatcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatc 271523  T
Q  253 tcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    || ||| ||||||| ||||||||||||||||||||||| |||||    
T  271522 tcttttcaatcaaagcatatcaaatttcatcaattaagcataat 271479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 153 - 296
Target Start/End: Original strand, 644298 - 644441
Alignment:
Q  153 atttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatc 252  Q
    ||||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||| ||||||||||||||||| |||| ||||||||||||||  ||||    
T  644298 atttctcatcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatc 644397  T
Q  253 tcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    || ||| ||||||| ||||||||||||||||||||||| |||||    
T  644398 tcttttcaatcaaagcatatcaaatttcatcaattaagcataat 644441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 153 - 296
Target Start/End: Original strand, 830033 - 830176
Alignment:
Q  153 atttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatc 252  Q
    ||||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||| ||||||||||||||||| |||| ||||||||||||||  ||||    
T  830033 atttctcatcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatc 830132  T
Q  253 tcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    || ||| ||||||| ||||||||||||||||||||||| |||||    
T  830133 tcttttcaatcaaagcatatcaaatttcatcaattaagcataat 830176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 153 - 296
Target Start/End: Complemental strand, 15319421 - 15319278
Alignment:
Q  153 atttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatc 252  Q
    ||||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||| ||||||||||||||||| |||| ||||||| ||||||  ||||    
T  15319421 atttctcatcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaacatgaatcacatc 15319322  T
Q  253 tcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    || ||| ||||||||||||||||||||||||||||||| |||||    
T  15319321 tcttttcaatcaaaacatatcaaatttcatcaattaagcataat 15319278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 153 - 296
Target Start/End: Complemental strand, 15499790 - 15499647
Alignment:
Q  153 atttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatc 252  Q
    ||||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||| ||||||||||||||||| |||| ||||||| ||||||  ||||    
T  15499790 atttctcatcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaacatgaatcacatc 15499691  T
Q  253 tcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    || ||| ||||||||||||||||||||||||||||||| |||||    
T  15499690 tcttttcaatcaaaacatatcaaatttcatcaattaagcataat 15499647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 133 - 298
Target Start/End: Original strand, 16195204 - 16195370
Alignment:
Q  133 caaaacaacaacaacatctcatttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatc 232  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |  ||||||||| |||| |||||| | ||| |||||||||||| |  |||||||||    
T  16195204 caaaacaacaacaacatctcatttctcatcatcaatccataattatatatacctaagtcataattcaccctcaacaacatcagttaatagcaacaacatc 16195303  T
Q  233 aatggaatatgaattgcatctcattttaatcaaaacatatc-aaatttcatcaattaagtataatct 298  Q
    ||||||| ||||||  |||||||||| ||  | |||||||| ||||||||| |||||||||||||||    
T  16195304 aatggaacatgaatcacatctcatttcaacaacaacatatcaaaatttcataaattaagtataatct 16195370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 224 - 296
Target Start/End: Complemental strand, 13721119 - 13721047
Alignment:
Q  224 aacaacatcaatggaatatgaattgcatctcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    ||||||||||||   |||||| || |||||||||| |||||||||||||||||||||||||||||||||||||    
T  13721119 aacaacatcaattacatatgatttacatctcatttcaatcaaaacatatcaaatttcatcaattaagtataat 13721047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 52 - 169
Target Start/End: Original strand, 18612298 - 18612416
Alignment:
Q  52 acatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccattttctcaaaacaa-caacaacatc 150  Q
    ||||||||| ||||| || | ||||||   |||||||||| ||||||| |||| | |||||||||||||||||||||||  |||||||| ||||||||||    
T  18612298 acatgaaaagacactcaattacatataatcacttgaatcaaacatcatcttaaaccaaaatcaccatttgacccatttttgcaaaacaaccaacaacatc 18612397  T
Q  151 tcatttctcatcatcaatc 169  Q
    | |||||||| || |||||    
T  18612398 ttatttctcaccaacaatc 18612416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 52 - 169
Target Start/End: Original strand, 18619203 - 18619321
Alignment:
Q  52 acatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccattttctcaaaacaa-caacaacatc 150  Q
    ||||||||| ||||| || | ||||||  ||||||||||| ||| ||| |||| | |||||||||||||||||||||||  |||||||| ||||||||||    
T  18619203 acatgaaaagacactcaattacatataataacttgaatcaaacaacatcttaaaccaaaatcaccatttgacccatttttgcaaaacaaccaacaacatc 18619302  T
Q  151 tcatttctcatcatcaatc 169  Q
    | |||||||| || |||||    
T  18619303 ttatttctcaccaacaatc 18619321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 130
Target Start/End: Original strand, 24907710 - 24907787
Alignment:
Q  52 acatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccatttt 130  Q
    ||||||||| ||||| ||||||||||| |||||||||||| || ||||||||| |||||||||||| |||| |||||||    
T  24907710 acatgaaaagacactcaaatccatataaaaacttgaatcaaacttcattttaa-caaaaatcaccacttgatccatttt 24907787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 16873227 - 16873170
Alignment:
Q  239 atatgaattgcatctcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    |||||| || |||||||||| || ||||||||||||||||||||||||||||||||||    
T  16873227 atatgatttacatctcatttcaaccaaaacatatcaaatttcatcaattaagtataat 16873170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 82 - 169
Target Start/End: Complemental strand, 21494783 - 21494695
Alignment:
Q  82 acttgaatcacacatcattttaatcaaaaatcaccatttgacccattttctcaaaacaa-caacaacatctcatttctcatcatcaatc 169  Q
    |||| ||||| |||||||||||| | ||||||||||||||| |||||||  |||||||| ||||||||||||| |||||| || |||||    
T  21494783 acttaaatcaaacatcattttaaaccaaaatcaccatttgatccatttttgcaaaacaaccaacaacatctcaattctcaccaacaatc 21494695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 82 - 169
Target Start/End: Original strand, 22147360 - 22147448
Alignment:
Q  82 acttgaatcacacatcattttaatcaaaaatcaccatttgacccattttctcaaaacaa-caacaacatctcatttctcatcatcaatc 169  Q
    |||||||||| ||||||| |||| | ||||| |||||||||||||||||  |||||||| ||||||||||| |||||||| || |||||    
T  22147360 acttgaatcaaacatcatcttaaaccaaaattaccatttgacccatttttccaaaacaaccaacaacatcttatttctcaccaacaatc 22147448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 169
Target Start/End: Original strand, 22886247 - 22886336
Alignment:
Q  82 acttgaatcacacatcattttaatcaaaaatcaccatttgacccattttctcaaaacaa-caacaacatc-tcatttctcatcatcaatc 169  Q
    |||||||||| |||||||||||| | ||||||  |||||||||||||||  |||||||| |||||||||| | ||||||||||| |||||    
T  22886247 acttgaatcaaacatcattttaaaccaaaatcctcatttgacccatttttgcaaaacaaccaacaacatcttaatttctcatcaacaatc 22886336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 104; Significance: 7e-52; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 153 - 296
Target Start/End: Original strand, 39640 - 39783
Alignment:
Q  153 atttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatc 252  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||  ||||    
T  39640 atttctcatcatcaatccacaattaagtatacccaaatcatgattcactcacaatagcatcagttaacaataacaacatcaatgaaatatgaataacatc 39739  T
Q  253 tcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    |||||| ||  ||||||||||||||||||||||||||| |||||    
T  39740 tcatttcaaaaaaaacatatcaaatttcatcaattaagaataat 39783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 153 - 296
Target Start/End: Original strand, 31303 - 31446
Alignment:
Q  153 atttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatc 252  Q
    ||||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||| ||||||||||||||||| |||| ||||||||||||||  ||||    
T  31303 atttctcatcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatc 31402  T
Q  253 tcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    || ||| ||||||| ||||||||||||||||||||||| |||||    
T  31403 tcttttcaatcaaagcatatcaaatttcatcaattaagcataat 31446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 153 - 296
Target Start/End: Complemental strand, 154269 - 154126
Alignment:
Q  153 atttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatc 252  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||| ||||||||||||| ||||||||||||||||| |  ||||    
T  154269 atttctcatcatcaatccacaattaagtatacccaaatcatgattcacccacaatagcataagttaacaataaccacatcaatggaatatgattcacatc 154170  T
Q  253 tcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    |||||| ||||||||||||||||||||||||||||||| |||||    
T  154169 tcatttcaatcaaaacatatcaaatttcatcaattaagcataat 154126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0892 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0892
Description:

Target: scaffold0892; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 32 - 234
Target Start/End: Original strand, 3288 - 3490
Alignment:
Q  32 gtttacccaaatgtttttagacatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccattttc 131  Q
    ||||||||||| ||||||||||||||||| | ||| |||  ||||||||||||||||||| |||| | ||||| ||||| | ||||||||||||||||||    
T  3288 gtttacccaaacgtttttagacatgaaaagatactcaaaatcatatacaaacttgaatcaaacattaatttaaacaaaatt-accatttgacccattttc 3386  T
Q  132 tcaaaacaacaacaacatctcatttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataa-catcagttaacaataacaaca 230  Q
    ||||||||||||||||||||||||| |||||| ||| |||  |  | ||||||| || ||||| |||||||||||||| ||||||||||||| |||||||    
T  3387 tcaaaacaacaacaacatctcatttttcatcaacaacccatgaacatgtatacccaagtcatggttcactcacaataatcatcagttaacaacaacaaca 3486  T
Q  231 tcaa 234  Q
    ||||    
T  3487 tcaa 3490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 32 - 234
Target Start/End: Original strand, 53749 - 53951
Alignment:
Q  32 gtttacccaaatgtttttagacatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccattttc 131  Q
    |||||||||||  |||||||||||||||| | ||| |||  ||||||||||||||||||| |||||| ||||| ||||| ||||||||||||||||||||    
T  53749 gtttacccaaacatttttagacatgaaaagatactcaaaatcatatacaaacttgaatcaaacatcaatttaaacaaaa-tcaccatttgacccattttc 53847  T
Q  132 tcaaaacaacaacaacatctcatttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataa-catcagttaacaataacaaca 230  Q
    ||||||||||||||||||||||||| |||||| ||| |||  |  | ||||||| || ||||| |||||||||||||| ||||| ||||||| |||||||    
T  53848 tcaaaacaacaacaacatctcatttttcatcaacaacccatgaacatgtatacccaagtcatggttcactcacaataatcatcaattaacaacaacaaca 53947  T
Q  231 tcaa 234  Q
    ||||    
T  53948 tcaa 53951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 153 - 296
Target Start/End: Original strand, 39097 - 39240
Alignment:
Q  153 atttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatc 252  Q
    ||||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||| ||||||||||||||||| |||| ||||||||||||||  ||||    
T  39097 atttctcatcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatc 39196  T
Q  253 tcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    || ||| ||||||| ||||||||||||||||||||||| |||||    
T  39197 tcttttcaatcaaagcatatcaaatttcatcaattaagcataat 39240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 89; Significance: 6e-43; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 156 - 296
Target Start/End: Original strand, 29159 - 29299
Alignment:
Q  156 tctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatctca 255  Q
    ||||||||||||| |||||| ||||||| | ||||||| ||||||| |||||||||| | ||||||||||| |||||||||||||||||||  |||||||    
T  29159 tctcatcatcaatacacaattaagtataaccaaatcataattcactaacaataacataaattaacaataaccacatcaatggaatatgaatcacatctca 29258  T
Q  256 ttttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    ||| ||||||||||||||||||||||||||||||| |||||    
T  29259 tttcaatcaaaacatatcaaatttcatcaattaagcataat 29299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 85; Significance: 2e-40; HSPs: 3)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 82 - 292
Target Start/End: Original strand, 54340 - 54549
Alignment:
Q  82 acttgaatcacacatcattttaatcaaaaatcaccatttgacccattttctcaaaacaac-aacaacatctcatttctcatcatcaatccacaatgaagt 180  Q
    |||||||||| |||||||||||| |||||  ||||||||||||||||||  ||||||||| ||||| |||| ||||||||||||||||||| ||  | ||    
T  54340 acttgaatcaaacatcattttaaacaaaa--caccatttgacccatttttgcaaaacaactaacaaaatcttatttctcatcatcaatccataaatatgt 54437  T
Q  181 atacctaaatcatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattgcatctcattttaatcaaaacatatcaaatttc 280  Q
    ||||| || ||||||||||| ||||| |||||||||||| |  |||||||||||||||| ||||||  |||||||||| ||  | ||||||||||| |||    
T  54438 atacccaactcatgattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctcatttcaacaacaacatatcaaaattc 54537  T
Q  281 atcaattaagta 292  Q
    | ||||| ||||    
T  54538 accaattgagta 54549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 82 - 233
Target Start/End: Original strand, 44935 - 45085
Alignment:
Q  82 acttgaatcacacatcattttaatcaaaaatcaccatttgacccattttctcaaaacaac-aacaacatctcatttctcatcatcaatccacaatgaagt 180  Q
    |||||||||| |||||||||||| |||||  ||||||||||||||||||  ||||||||| ||| |||||| ||||||||||||||||||| ||  | ||    
T  44935 acttgaatcaaacatcattttaaacaaaa--caccatttgacccatttttgcaaaacaactaaccacatcttatttctcatcatcaatccataaatatgt 45032  T
Q  181 atacctaaatcatgattcactcacaataacatcagttaacaataacaacatca 233  Q
    ||||| || ||||||||||| ||||| |||||||||||| |  ||||||||||    
T  45033 atacccaagtcatgattcacccacaacaacatcagttaatagcaacaacatca 45085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 292
Target Start/End: Original strand, 45095 - 45163
Alignment:
Q  224 aacaacatcaatggaatatgaattgcatctcattttaatcaaaacatatcaaatttcatcaattaagta 292  Q
    |||||||||||||||| ||||||  |||||||||| ||  | ||||||||||| |||| ||||| ||||    
T  45095 aacaacatcaatggaacatgaatcacatctcatttcaacaacaacatatcaaaattcaccaattgagta 45163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 124 - 212
Target Start/End: Complemental strand, 24039 - 23951
Alignment:
Q  124 ccattttctcaaaacaacaacaacatctcatttctcatcatcaatccacaatgaagtatacctaaatcatgattcactcacaataacat 212  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||| ||| || | || |||||||||||| |||||    
T  24039 ccattttctcaaaacaacaacaacatctcatttttcatcatcaatccataattaagtacacccaagttataattcactcacaacaacat 23951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 52 - 169
Target Start/End: Complemental strand, 5945 - 5827
Alignment:
Q  52 acatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccattttctcaaaacaa-caacaacatc 150  Q
    ||||||||| ||||| ||||||||| |   |||||||||| |||||||||||| | ||||||| ||||||||||||||   |||||||| ||||||||||    
T  5945 acatgaaaagacactcaaatccataaaaccacttgaatcaaacatcattttaaaccaaaatcatcatttgacccatttatacaaaacaaccaacaacatc 5846  T
Q  151 tcatttctcatcatcaatc 169  Q
    |||||||||| || |||||    
T  5845 tcatttctcaccaacaatc 5827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 52 - 169
Target Start/End: Original strand, 17593 - 17710
Alignment:
Q  52 acatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccattttctcaaaacaa-caacaacatc 150  Q
    ||||||||| ||||| || ||||||||   |||||||||| |||||||||||| | |||||||||||||||||||||||  |||||||| ||||||||||    
T  17593 acatgaaaagacactcaattccatataaccacttgaatcaaacatcattttaaac-aaaatcaccatttgacccatttttgcaaaacaaccaacaacatc 17691  T
Q  151 tcatttctcatcatcaatc 169  Q
    | |||||||| || |||||    
T  17692 ttatttctcaccaacaatc 17710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 169
Target Start/End: Complemental strand, 50211 - 50094
Alignment:
Q  53 catgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccattttctcaaaacaa-caacaacatct 151  Q
    |||||||||||||| || | ||||||   |||||||| | |||||||||||| | |||||||||||||||||||||||  |||||||| |||||||||||    
T  50211 catgaaaatacactcaattacatataatcacttgaataaaacatcattttaaaccaaaatcaccatttgacccatttttgcaaaacaaccaacaacatct 50112  T
Q  152 catttctcatcatcaatc 169  Q
     |||| |||||| |||||    
T  50111 tatttttcatcaacaatc 50094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1500 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold1500
Description:

Target: scaffold1500; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 224 - 296
Target Start/End: Complemental strand, 1705 - 1633
Alignment:
Q  224 aacaacatcaatggaatatgaattgcatctcattttaatcaaaacatatcaaatttcatcaattaagtataat 296  Q
    ||||||||||||   |||||| || |||||||||| |||||||||||||||||||||||||||||||||||||    
T  1705 aacaacatcaattacatatgatttacatctcatttcaatcaaaacatatcaaatttcatcaattaagtataat 1633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 82 - 169
Target Start/End: Complemental strand, 34728 - 34640
Alignment:
Q  82 acttgaatcacacatcattttaatcaaaaatcaccatttgacccattttctcaaaacaa-caacaacatctcatttctcatcatcaatc 169  Q
    |||||||||| |||||||||||| | |||||||||||||||||||||||  |||||||| ||||||||||||| |||||| || |||||    
T  34728 acttgaatcaaacatcattttaaaccaaaatcaccatttgacccatttttgcaaaacaaccaacaacatctcaattctcaccaacaatc 34640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 52 - 158
Target Start/End: Original strand, 5114 - 5220
Alignment:
Q  52 acatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccattttctcaaaacaa-caacaacatc 150  Q
    ||||||||| ||||| || | ||||||   |||||||||| |||||||||||| ||||| |||||||||||||||||||  |||||||| ||||||||||    
T  5114 acatgaaaagacactcaattacatataactacttgaatcaaacatcattttaaacaaaa-tcaccatttgacccatttttgcaaaacaaccaacaacatc 5212  T
Q  151 tcatttct 158  Q
    | ||||||    
T  5213 ttatttct 5220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 52 - 169
Target Start/End: Original strand, 11642 - 11755
Alignment:
Q  52 acatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccattttctcaaaacaacaacaacatct 151  Q
    ||||||||| |||||||| ||| ||||   |||||||||| ||||||||||||  | ||| ||||||||||||||||||  |||||||||  ||||||||    
T  11642 acatgaaaagacacttaattccttataaccacttgaatcaaacatcattttaa--ataaaacaccatttgacccatttttgcaaaacaac--caacatct 11737  T
Q  152 catttctcatcatcaatc 169  Q
     |||||||| || |||||    
T  11738 tatttctcaccaacaatc 11755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 168
Target Start/End: Complemental strand, 6580 - 6463
Alignment:
Q  52 acatgaaaatacacttaaatccatatacaaacttgaatcacacatcattttaatcaaaaatcaccatttgacccattttct-caaaacaa-caacaacat 149  Q
    ||||||||| ||||| || | ||||||   |||||||||| |||||||||||| | |||||||  |||||||||||||| |  ||||||| |||||||||    
T  6580 acatgaaaagacactcaattacatataactacttgaatcaaacatcattttaaac-aaaatcattatttgacccattttttgtaaaacaaccaacaacat 6482  T
Q  150 ctcatttctcatcatcaat 168  Q
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T  6481 cttatttctcatcaacaat 6463  T

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Target: scaffold1311 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1311
Description:

Target: scaffold1311; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 167
Target Start/End: Original strand, 1652 - 1681
Alignment:
Q  138 caacaacaacatctcatttctcatcatcaa 167  Q
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T  1652 caacaacaacatctcatttctcatcatcaa 1681  T

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Target: scaffold0001 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 169
Target Start/End: Complemental strand, 165285 - 165208
Alignment:
Q  93 acatcattttaatcaaaaatcaccatttgacccattttctcaaaacaa-caacaacatctcatttctcatcatcaatc 169  Q
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T  165285 acatcatcttaaaccaaaatcaccatttgacccatttttgcaaaacaaccaacatcatcttttttctcaccaacaatc 165208  T

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