View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1133_low_51 (Length: 277)
Name: NF1133_low_51
Description: NF1133
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1133_low_51 |
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Alignment Details
Target: chr3 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 52 - 159
Target Start/End: Original strand, 53007905 - 53008012
Alignment:
| Q |
52 |
tatagcaacttagtttccatcttcttgagcatataaataactaatggttgaaattggtagaagaaacctgagtcccacccactcctatgcagttgctgaa |
151 |
Q |
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| T |
53007905 |
tatagcaacttagtttccatcttcttgagcatataaataactaatggttgaaattggtagaagaaacctgagtcccacccactcctatgcagttgctgaa |
53008004 |
T |
|
| Q |
152 |
aaatcatg |
159 |
Q |
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|||||||| |
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| T |
53008005 |
aaatcatg |
53008012 |
T |
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