View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1133_low_53 (Length: 275)
Name: NF1133_low_53
Description: NF1133
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1133_low_53 |
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Alignment Details
Target: chr3 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 37 - 223
Target Start/End: Complemental strand, 37047850 - 37047664
Alignment:
| Q |
37 |
agggggataacaagattgatattaagaagtttaagtctaatagtggtgcaaagacatatagcagcatccaaatcaacaagtccttgaagcaatggacaac |
136 |
Q |
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| T |
37047850 |
agggggataacaagattgatattaagaagtttaagtctaatagtggtgcaaagacatatagcagcatccaaatcaacaagtccttgaagcaatggacaac |
37047751 |
T |
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| Q |
137 |
atgtttgtttagcacttccacctataccaatatgtatgagtccaccaagcacatcaacacatgcacccaacttcaaagcatcaatgg |
223 |
Q |
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| T |
37047750 |
atgtttgtttagcacttccacctataccaatatgtatgagtccaccaagcacatcaacacatgcacccaacttcaaagcatcaatgg |
37047664 |
T |
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