View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1133_low_85 (Length: 243)

Name: NF1133_low_85
Description: NF1133
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1133_low_85
NF1133_low_85
[»] chr7 (52 HSPs)
chr7 (1-243)||(29763014-29763256)
chr7 (114-210)||(30813822-30813918)
chr7 (116-174)||(5409771-5409829)
chr7 (174-242)||(11061089-11061157)
chr7 (115-174)||(598269-598328)
chr7 (115-174)||(21864869-21864928)
chr7 (115-174)||(43027403-43027462)
chr7 (116-174)||(15680870-15680928)
chr7 (116-174)||(21880213-21880271)
chr7 (121-166)||(43250073-43250118)
chr7 (174-234)||(8234132-8234192)
chr7 (174-234)||(9408347-9408407)
chr7 (115-170)||(1433524-1433579)
chr7 (111-174)||(7438778-7438841)
chr7 (116-174)||(9778566-9778624)
chr7 (116-170)||(17852065-17852119)
chr7 (116-174)||(24339714-24339772)
chr7 (121-174)||(13770757-13770810)
chr7 (174-243)||(24339619-24339688)
chr7 (174-243)||(27945018-27945087)
chr7 (123-240)||(18215144-18215265)
chr7 (116-174)||(32093954-32094013)
chr7 (114-168)||(14729770-14729824)
chr7 (116-165)||(6490786-6490835)
chr7 (117-174)||(11665370-11665427)
chr7 (174-243)||(13770668-13770737)
chr7 (174-243)||(24105655-24105724)
chr7 (174-235)||(25481887-25481948)
chr7 (117-170)||(32287404-32287457)
chr7 (174-226)||(3991318-3991370)
chr7 (116-159)||(35862027-35862070)
chr7 (188-243)||(43027496-43027551)
chr7 (116-174)||(2334321-2334379)
chr7 (115-165)||(10230023-10230073)
chr7 (174-228)||(11831424-11831478)
chr7 (120-174)||(27229244-27229298)
chr7 (115-165)||(28155624-28155674)
chr7 (174-243)||(32094033-32094103)
chr7 (187-233)||(35861951-35861997)
chr7 (120-170)||(40287306-40287356)
chr7 (117-174)||(20545185-20545242)
chr7 (121-174)||(27732189-27732242)
chr7 (116-149)||(27945104-27945137)
chr7 (182-242)||(5409857-5409917)
chr7 (118-162)||(9408265-9408309)
chr7 (187-219)||(11665466-11665498)
chr7 (187-243)||(11722124-11722180)
chr7 (174-210)||(26033474-26033510)
chr7 (187-243)||(26733281-26733337)
chr7 (114-150)||(29812596-29812632)
chr7 (118-170)||(29998974-29999026)
chr7 (114-166)||(40131937-40131989)
[»] chr3 (68 HSPs)
chr3 (114-242)||(55401053-55401196)
chr3 (116-231)||(11610510-11610628)
chr3 (118-166)||(24204983-24205031)
chr3 (115-174)||(27505312-27505371)
chr3 (174-240)||(8587034-8587100)
chr3 (118-174)||(4987222-4987278)
chr3 (180-240)||(10954932-10954992)
chr3 (180-243)||(10335305-10335368)
chr3 (116-174)||(20503526-20503584)
chr3 (116-170)||(34185052-34185106)
chr3 (116-174)||(40993275-40993333)
chr3 (116-174)||(41961579-41961637)
chr3 (117-174)||(15999951-16000008)
chr3 (174-243)||(28917978-28918047)
chr3 (174-242)||(10268499-10268567)
chr3 (118-166)||(25775576-25775624)
chr3 (180-243)||(2620072-2620135)
chr3 (123-174)||(3631745-3631796)
chr3 (174-233)||(4987304-4987363)
chr3 (120-179)||(11666011-11666070)
chr3 (180-243)||(16000035-16000098)
chr3 (174-237)||(28812499-28812561)
chr3 (116-167)||(40052380-40052431)
chr3 (116-166)||(3163971-3164021)
chr3 (116-174)||(11252037-11252095)
chr3 (174-228)||(34910309-34910363)
chr3 (116-208)||(5407199-5407294)
chr3 (174-243)||(14216869-14216938)
chr3 (174-243)||(14222998-14223067)
chr3 (174-243)||(15796307-15796376)
chr3 (174-243)||(26492218-26492287)
chr3 (117-165)||(1389908-1389956)
chr3 (114-150)||(4990910-4990946)
chr3 (115-174)||(10955013-10955075)
chr3 (114-174)||(15796221-15796281)
chr3 (174-234)||(20503451-20503511)
chr3 (118-174)||(28918064-28918120)
chr3 (180-243)||(3164044-3164107)
chr3 (116-174)||(5440967-5441026)
chr3 (180-243)||(14979158-14979221)
chr3 (175-234)||(21479104-21479163)
chr3 (187-234)||(40052318-40052365)
chr3 (180-210)||(4201406-4201436)
chr3 (116-150)||(8842414-8842448)
chr3 (122-164)||(12704597-12704639)
chr3 (174-228)||(14209105-14209159)
chr3 (174-235)||(25775493-25775555)
chr3 (116-174)||(28812587-28812645)
chr3 (116-174)||(49651716-49651774)
chr3 (187-243)||(750644-750701)
chr3 (174-219)||(1509540-1509585)
chr3 (191-240)||(3865586-3865635)
chr3 (116-165)||(4466540-4466589)
chr3 (117-150)||(8789489-8789522)
chr3 (191-240)||(10318064-10318113)
chr3 (117-174)||(14216964-14217021)
chr3 (117-174)||(14223093-14223150)
chr3 (174-234)||(14747547-14747608)
chr3 (174-219)||(26508111-26508156)
chr3 (129-166)||(26665205-26665242)
chr3 (174-243)||(41961663-41961732)
chr3 (121-165)||(1509637-1509681)
chr3 (175-243)||(3610610-3610678)
chr3 (116-160)||(13807229-13807273)
chr3 (114-170)||(17276792-17276848)
chr3 (116-172)||(18427012-18427068)
chr3 (180-240)||(25948906-25948966)
chr3 (180-240)||(29508424-29508484)
[»] chr8 (60 HSPs)
chr8 (114-240)||(36450692-36450833)
chr8 (114-174)||(14134760-14134820)
chr8 (118-166)||(44067596-44067644)
chr8 (115-174)||(6065585-6065644)
chr8 (120-174)||(5813653-5813707)
chr8 (116-174)||(18407780-18407838)
chr8 (180-237)||(15816148-15816205)
chr8 (187-243)||(22651953-22652009)
chr8 (114-174)||(22652048-22652108)
chr8 (116-174)||(8343388-8343446)
chr8 (112-174)||(21465484-21465546)
chr8 (116-174)||(29510233-29510291)
chr8 (109-174)||(3951469-3951534)
chr8 (174-243)||(8343293-8343362)
chr8 (174-243)||(20873046-20873115)
chr8 (174-243)||(22197755-22197824)
chr8 (117-174)||(29447040-29447097)
chr8 (174-243)||(29510317-29510386)
chr8 (114-174)||(15816056-15816116)
chr8 (117-164)||(3658224-3658271)
chr8 (116-170)||(22197671-22197725)
chr8 (128-174)||(22943301-22943347)
chr8 (174-232)||(24613509-24613566)
chr8 (174-243)||(2572069-2572138)
chr8 (187-240)||(13436990-13437043)
chr8 (174-243)||(18170495-18170564)
chr8 (174-243)||(18634063-18634132)
chr8 (109-174)||(29447516-29447581)
chr8 (187-243)||(3677763-3677819)
chr8 (116-172)||(11803333-11803389)
chr8 (116-164)||(13397622-13397670)
chr8 (117-164)||(24205749-24205796)
chr8 (119-170)||(24727684-24727735)
chr8 (115-150)||(31514939-31514974)
chr8 (119-174)||(40332252-40332307)
chr8 (115-174)||(41831874-41831933)
chr8 (116-162)||(4673354-4673400)
chr8 (116-174)||(12570438-12570496)
chr8 (116-174)||(12570664-12570722)
chr8 (192-242)||(24196628-24196678)
chr8 (112-174)||(28745570-28745632)
chr8 (174-236)||(30271304-30271366)
chr8 (116-174)||(31557057-31557115)
chr8 (116-174)||(34450961-34451019)
chr8 (113-171)||(39820493-39820550)
chr8 (118-171)||(926730-926783)
chr8 (174-243)||(4673438-4673507)
chr8 (174-215)||(4948657-4948698)
chr8 (116-165)||(8343037-8343086)
chr8 (116-161)||(17751730-17751775)
chr8 (116-161)||(17760717-17760762)
chr8 (174-219)||(25566842-25566887)
chr8 (174-235)||(30077400-30077461)
chr8 (182-243)||(41838144-41838205)
chr8 (195-243)||(926822-926870)
chr8 (118-174)||(3025612-3025668)
chr8 (114-174)||(4122176-4122236)
chr8 (174-210)||(8342982-8343018)
chr8 (116-164)||(13403177-13403225)
chr8 (187-243)||(25192373-25192429)
[»] chr1 (86 HSPs)
chr1 (114-243)||(48450548-48450669)
chr1 (111-174)||(40917821-40917884)
chr1 (116-174)||(9828116-9828174)
chr1 (116-174)||(18471356-18471414)
chr1 (116-202)||(46940748-46940834)
chr1 (117-174)||(40258874-40258931)
chr1 (118-174)||(1486646-1486702)
chr1 (118-174)||(16297223-16297279)
chr1 (174-234)||(22881629-22881689)
chr1 (180-243)||(398784-398847)
chr1 (180-243)||(34298413-34298476)
chr1 (116-174)||(6427536-6427594)
chr1 (180-234)||(30359374-30359428)
chr1 (116-174)||(37598892-37598950)
chr1 (174-240)||(46348396-46348462)
chr1 (116-165)||(29144320-29144369)
chr1 (174-235)||(31672908-31672969)
chr1 (174-237)||(1705005-1705068)
chr1 (118-165)||(25452108-25452155)
chr1 (118-165)||(42359391-42359438)
chr1 (180-242)||(1486728-1486790)
chr1 (116-166)||(2218297-2218347)
chr1 (116-174)||(5898206-5898264)
chr1 (174-243)||(13011228-13011298)
chr1 (182-240)||(16812523-16812581)
chr1 (112-174)||(18337390-18337452)
chr1 (174-240)||(18556469-18556535)
chr1 (116-174)||(22515827-22515885)
chr1 (117-155)||(28663677-28663715)
chr1 (107-234)||(35702533-35702661)
chr1 (174-243)||(40917728-40917795)
chr1 (116-174)||(46348323-46348381)
chr1 (116-174)||(47989569-47989627)
chr1 (174-243)||(5927353-5927422)
chr1 (174-243)||(21378555-21378624)
chr1 (174-219)||(24577199-24577244)
chr1 (174-243)||(31015020-31015089)
chr1 (178-235)||(40285671-40285728)
chr1 (174-239)||(42359462-42359527)
chr1 (174-243)||(47989475-47989543)
chr1 (114-243)||(48040412-48040544)
chr1 (115-148)||(48547937-48547970)
chr1 (174-230)||(113289-113345)
chr1 (179-239)||(2896139-2896199)
chr1 (187-243)||(6427327-6427383)
chr1 (117-165)||(10233326-10233374)
chr1 (114-170)||(15323233-15323289)
chr1 (174-238)||(22515900-22515964)
chr1 (116-160)||(31694639-31694683)
chr1 (192-236)||(37598816-37598860)
chr1 (116-164)||(42004882-42004929)
chr1 (174-237)||(1815240-1815303)
chr1 (116-159)||(7918154-7918197)
chr1 (180-238)||(9033026-9033085)
chr1 (116-171)||(18556385-18556440)
chr1 (116-159)||(22947806-22947849)
chr1 (174-236)||(32434729-32434792)
chr1 (115-174)||(32461392-32461451)
chr1 (174-225)||(40258946-40258997)
chr1 (116-174)||(1815318-1815376)
chr1 (116-174)||(5944355-5944413)
chr1 (187-233)||(9449034-9449080)
chr1 (180-242)||(17754289-17754351)
chr1 (116-150)||(21365992-21366026)
chr1 (114-164)||(22794016-22794066)
chr1 (116-170)||(34712323-34712377)
chr1 (116-174)||(38078601-38078659)
chr1 (174-240)||(38078674-38078740)
chr1 (174-243)||(6612184-6612253)
chr1 (187-236)||(9103624-9103673)
chr1 (117-150)||(10572535-10572568)
chr1 (174-243)||(14359535-14359603)
chr1 (116-169)||(16164244-16164297)
chr1 (118-171)||(17778617-17778670)
chr1 (114-159)||(27965938-27965983)
chr1 (116-165)||(52903316-52903365)
chr1 (187-243)||(1262861-1262917)
chr1 (187-243)||(9709797-9709853)
chr1 (180-228)||(10233245-10233293)
chr1 (187-243)||(10572615-10572671)
chr1 (122-158)||(13011172-13011208)
chr1 (174-210)||(18337339-18337375)
chr1 (116-160)||(22881567-22881611)
chr1 (174-218)||(32461476-32461520)
chr1 (114-150)||(36878551-36878587)
chr1 (187-235)||(36905982-36906030)
[»] chr6 (60 HSPs)
chr6 (174-243)||(10770687-10770756)
chr6 (116-243)||(34595111-34595253)
chr6 (114-243)||(7938093-7938221)
chr6 (174-243)||(8776986-8777055)
chr6 (174-240)||(17841602-17841668)
chr6 (117-240)||(31959139-31959268)
chr6 (174-243)||(426527-426596)
chr6 (182-243)||(853880-853941)
chr6 (174-243)||(8365532-8365601)
chr6 (174-243)||(12696301-12696370)
chr6 (174-243)||(16766674-16766743)
chr6 (174-243)||(16833285-16833354)
chr6 (117-179)||(9658935-9658998)
chr6 (116-174)||(4878004-4878061)
chr6 (116-174)||(8365448-8365506)
chr6 (116-174)||(8776908-8776966)
chr6 (116-174)||(17327590-17327648)
chr6 (116-174)||(28152159-28152217)
chr6 (116-174)||(28715356-28715414)
chr6 (123-168)||(7930368-7930413)
chr6 (174-243)||(9107383-9107452)
chr6 (117-174)||(31384991-31385048)
chr6 (115-174)||(16766769-16766828)
chr6 (116-174)||(3209460-3209518)
chr6 (116-174)||(10339054-10339112)
chr6 (116-174)||(24645542-24645600)
chr6 (174-243)||(1681735-1681804)
chr6 (183-243)||(4877919-4877980)
chr6 (114-151)||(7723197-7723234)
chr6 (174-243)||(7977843-7977912)
chr6 (117-174)||(17841530-17841587)
chr6 (117-165)||(1700406-1700454)
chr6 (180-236)||(7265612-7265668)
chr6 (117-165)||(26553816-26553864)
chr6 (180-243)||(3398596-3398658)
chr6 (174-233)||(7801169-7801228)
chr6 (182-237)||(7930288-7930343)
chr6 (119-166)||(9025448-9025495)
chr6 (180-243)||(9658856-9658919)
chr6 (174-217)||(31384923-31384966)
chr6 (180-243)||(31579244-31579307)
chr6 (119-174)||(32978842-32978897)
chr6 (180-210)||(7151422-7151452)
chr6 (116-174)||(7248430-7248488)
chr6 (116-166)||(7625185-7625235)
chr6 (119-165)||(8389411-8389457)
chr6 (116-174)||(16833369-16833427)
chr6 (174-240)||(28152079-28152144)
chr6 (116-174)||(34073278-34073335)
chr6 (118-159)||(5569825-5569866)
chr6 (113-150)||(5732471-5732508)
chr6 (116-165)||(9107299-9107348)
chr6 (181-242)||(19044442-19044503)
chr6 (145-174)||(25038029-25038058)
chr6 (187-240)||(30866170-30866223)
chr6 (174-210)||(4118346-4118382)
chr6 (118-174)||(5000557-5000613)
chr6 (174-210)||(5970121-5970157)
chr6 (187-243)||(9027155-9027211)
chr6 (189-237)||(19147431-19147479)
[»] chr4 (64 HSPs)
chr4 (116-243)||(23292926-23293068)
chr4 (116-209)||(3064868-3064961)
chr4 (117-174)||(3947702-3947759)
chr4 (118-243)||(22440559-22440682)
chr4 (180-243)||(36635301-36635364)
chr4 (116-174)||(715545-715603)
chr4 (116-174)||(752871-752929)
chr4 (116-174)||(24613630-24613688)
chr4 (116-174)||(35161097-35161155)
chr4 (116-170)||(42640589-42640643)
chr4 (116-165)||(18513175-18513224)
chr4 (174-243)||(19482645-19482714)
chr4 (117-174)||(30982808-30982865)
chr4 (119-170)||(28084589-28084640)
chr4 (180-239)||(35158004-35158063)
chr4 (116-166)||(2625959-2626009)
chr4 (174-240)||(14465088-14465154)
chr4 (116-174)||(19482740-19482798)
chr4 (116-174)||(22234819-22234877)
chr4 (116-174)||(29205529-29205587)
chr4 (121-171)||(30838285-30838335)
chr4 (116-174)||(35157925-35157983)
chr4 (116-174)||(36635391-36635449)
chr4 (174-243)||(27706190-27706259)
chr4 (174-243)||(40481614-40481682)
chr4 (174-234)||(11596365-11596425)
chr4 (174-242)||(12797351-12797418)
chr4 (180-243)||(2361994-2362057)
chr4 (115-174)||(12895213-12895272)
chr4 (187-242)||(12895300-12895355)
chr4 (120-171)||(20743210-20743261)
chr4 (116-171)||(24343577-24343632)
chr4 (174-225)||(29205439-29205490)
chr4 (174-240)||(30298926-30298993)
chr4 (174-240)||(30327794-30327861)
chr4 (180-219)||(54580042-54580081)
chr4 (112-166)||(941314-941368)
chr4 (116-150)||(5775304-5775338)
chr4 (114-152)||(12708225-12708263)
chr4 (115-161)||(12895054-12895100)
chr4 (116-174)||(15724483-15724541)
chr4 (116-174)||(16073455-16073513)
chr4 (174-240)||(21945483-21945549)
chr4 (116-174)||(28964188-28964246)
chr4 (187-229)||(32273552-32273594)
chr4 (116-174)||(34306744-34306802)
chr4 (116-174)||(49431087-49431145)
chr4 (116-162)||(53381530-53381576)
chr4 (118-174)||(4157210-4157266)
chr4 (118-174)||(4157497-4157553)
chr4 (117-150)||(4383451-4383484)
chr4 (182-243)||(11651155-11651216)
chr4 (117-174)||(14465006-14465063)
chr4 (181-234)||(50280867-50280920)
chr4 (114-174)||(1148370-1148430)
chr4 (174-210)||(6485624-6485660)
chr4 (116-164)||(11596297-11596345)
chr4 (116-164)||(11931362-11931410)
chr4 (117-165)||(17425348-17425396)
chr4 (116-164)||(17876237-17876285)
chr4 (174-210)||(28964261-28964297)
chr4 (117-165)||(40965341-40965389)
chr4 (116-172)||(47264060-47264116)
chr4 (180-243)||(49431002-49431066)
[»] chr2 (51 HSPs)
chr2 (116-243)||(18840953-18841095)
chr2 (116-174)||(26769583-26769641)
chr2 (118-174)||(2438661-2438717)
chr2 (114-174)||(35056940-35057000)
chr2 (174-241)||(30717543-30717610)
chr2 (174-243)||(19536410-19536480)
chr2 (116-166)||(37419823-37419873)
chr2 (116-170)||(37559042-37559096)
chr2 (116-174)||(38117099-38117157)
chr2 (174-243)||(12940948-12941017)
chr2 (174-243)||(15657841-15657910)
chr2 (174-243)||(20539687-20539756)
chr2 (117-174)||(28596530-28596587)
chr2 (174-243)||(30335394-30335463)
chr2 (117-174)||(44860392-44860449)
chr2 (174-242)||(6940233-6940301)
chr2 (174-242)||(15972851-15972919)
chr2 (174-242)||(18421941-18422009)
chr2 (114-174)||(42511320-42511380)
chr2 (180-243)||(34785001-34785064)
chr2 (174-240)||(21374712-21374778)
chr2 (174-240)||(30404863-30404929)
chr2 (116-166)||(34006930-34006980)
chr2 (116-174)||(34993922-34993980)
chr2 (174-240)||(37558957-37559023)
chr2 (116-165)||(10535685-10535734)
chr2 (182-239)||(24894370-24894427)
chr2 (180-240)||(23718006-23718066)
chr2 (180-240)||(24105678-24105738)
chr2 (114-174)||(30717457-30717517)
chr2 (117-174)||(35449568-35449627)
chr2 (180-243)||(21616739-21616802)
chr2 (187-242)||(34337202-34337257)
chr2 (116-174)||(11223793-11223850)
chr2 (116-174)||(15972934-15972992)
chr2 (174-243)||(23058455-23058525)
chr2 (116-174)||(24009356-24009414)
chr2 (116-170)||(28412422-28412476)
chr2 (116-174)||(34784911-34784969)
chr2 (180-242)||(36756363-36756425)
chr2 (180-241)||(2331773-2331834)
chr2 (128-169)||(14996171-14996212)
chr2 (118-171)||(15657939-15657992)
chr2 (116-165)||(15909570-15909619)
chr2 (116-173)||(21782744-21782801)
chr2 (115-171)||(12601140-12601196)
chr2 (114-174)||(19580223-19580283)
chr2 (118-174)||(19942326-19942382)
chr2 (114-174)||(27084330-27084390)
chr2 (118-174)||(36756275-36756331)
chr2 (190-234)||(38117188-38117232)
[»] scaffold0086 (1 HSPs)
scaffold0086 (115-174)||(3000-3059)
[»] chr5 (60 HSPs)
chr5 (116-243)||(6326253-6326379)
chr5 (180-243)||(19552562-19552625)
chr5 (174-240)||(14674249-14674315)
chr5 (118-243)||(21190998-21191138)
chr5 (115-240)||(21576684-21576824)
chr5 (116-174)||(27932296-27932354)
chr5 (116-174)||(30098398-30098456)
chr5 (116-174)||(42893421-42893479)
chr5 (113-166)||(2436980-2437033)
chr5 (174-243)||(6247599-6247668)
chr5 (116-169)||(14873588-14873641)
chr5 (174-235)||(21351918-21351979)
chr5 (174-243)||(21522727-21522796)
chr5 (174-243)||(21533293-21533362)
chr5 (174-243)||(24906314-24906383)
chr5 (180-240)||(6770523-6770583)
chr5 (116-172)||(32766872-32766928)
chr5 (118-174)||(43001866-43001922)
chr5 (180-243)||(22013391-22013454)
chr5 (119-174)||(39268541-39268596)
chr5 (174-237)||(39698524-39698587)
chr5 (187-242)||(41995449-41995504)
chr5 (116-150)||(24906252-24906286)
chr5 (120-174)||(30183621-30183675)
chr5 (116-174)||(31084389-31084447)
chr5 (116-174)||(39698613-39698671)
chr5 (116-174)||(43564942-43565000)
chr5 (174-231)||(33178014-33178071)
chr5 (174-243)||(37328857-37328926)
chr5 (174-235)||(42893345-42893406)
chr5 (124-168)||(17088358-17088402)
chr5 (116-164)||(19820328-19820376)
chr5 (114-174)||(21522822-21522882)
chr5 (114-174)||(21533388-21533448)
chr5 (174-234)||(31084309-31084369)
chr5 (116-168)||(35017110-35017162)
chr5 (115-174)||(7677777-7677836)
chr5 (180-243)||(13287418-13287481)
chr5 (115-174)||(21194062-21194121)
chr5 (107-166)||(41558579-41558638)
chr5 (116-150)||(10298635-10298669)
chr5 (128-174)||(15382546-15382592)
chr5 (116-174)||(16304366-16304424)
chr5 (116-150)||(17123132-17123166)
chr5 (114-168)||(17593661-17593715)
chr5 (116-150)||(22423764-22423798)
chr5 (120-174)||(36642696-36642749)
chr5 (174-240)||(4105237-4105305)
chr5 (119-152)||(18586232-18586265)
chr5 (182-239)||(19579682-19579739)
chr5 (117-174)||(21542102-21542159)
chr5 (180-240)||(43564863-43564921)
chr5 (188-236)||(10298553-10298601)
chr5 (180-243)||(14422881-14422942)
chr5 (183-235)||(17123033-17123085)
chr5 (194-242)||(17177056-17177104)
chr5 (180-240)||(19168840-19168900)
chr5 (187-243)||(22423838-22423894)
chr5 (118-174)||(23015926-23015982)
chr5 (116-164)||(38464313-38464361)
[»] scaffold0450 (1 HSPs)
scaffold0450 (116-174)||(8564-8622)
[»] scaffold0103 (1 HSPs)
scaffold0103 (174-240)||(51791-51857)
[»] scaffold0018 (1 HSPs)
scaffold0018 (174-243)||(178831-178901)
[»] scaffold0003 (3 HSPs)
scaffold0003 (116-174)||(241666-241724)
scaffold0003 (180-243)||(241571-241634)
scaffold0003 (180-237)||(348083-348142)
[»] scaffold0223 (1 HSPs)
scaffold0223 (174-243)||(20149-20218)
[»] scaffold0007 (1 HSPs)
scaffold0007 (118-166)||(225199-225247)
[»] scaffold0053 (1 HSPs)
scaffold0053 (109-243)||(8775-8924)
[»] scaffold0793 (1 HSPs)
scaffold0793 (116-174)||(4821-4879)
[»] scaffold0652 (2 HSPs)
scaffold0652 (112-174)||(398-460)
scaffold0652 (174-243)||(475-544)
[»] scaffold0306 (2 HSPs)
scaffold0306 (182-240)||(13380-13438)
scaffold0306 (118-174)||(13467-13523)
[»] scaffold0152 (2 HSPs)
scaffold0152 (182-240)||(21889-21947)
scaffold0152 (118-174)||(21804-21860)
[»] scaffold0027 (2 HSPs)
scaffold0027 (174-243)||(46659-46728)
scaffold0027 (116-150)||(46742-46776)
[»] scaffold0004 (1 HSPs)
scaffold0004 (117-174)||(92883-92940)
[»] scaffold0050 (1 HSPs)
scaffold0050 (114-174)||(70339-70399)
[»] scaffold0361 (1 HSPs)
scaffold0361 (116-228)||(14522-14646)
[»] scaffold0022 (2 HSPs)
scaffold0022 (180-243)||(90820-90883)
scaffold0022 (116-174)||(90904-90962)
[»] scaffold0380 (1 HSPs)
scaffold0380 (116-174)||(8662-8720)
[»] scaffold0019 (1 HSPs)
scaffold0019 (116-174)||(71797-71855)
[»] scaffold0246 (1 HSPs)
scaffold0246 (174-243)||(19553-19621)
[»] scaffold0011 (1 HSPs)
scaffold0011 (174-219)||(17762-17807)
[»] scaffold0008 (1 HSPs)
scaffold0008 (118-174)||(263303-263359)
[»] scaffold0009 (1 HSPs)
scaffold0009 (123-162)||(188473-188512)
[»] scaffold1528 (1 HSPs)
scaffold1528 (180-242)||(1013-1075)
[»] scaffold0475 (1 HSPs)
scaffold0475 (116-150)||(3393-3427)
[»] scaffold0136 (1 HSPs)
scaffold0136 (116-174)||(3778-3836)
[»] scaffold0021 (2 HSPs)
scaffold0021 (116-174)||(2978-3036)
scaffold0021 (174-243)||(130459-130528)
[»] scaffold0020 (1 HSPs)
scaffold0020 (116-166)||(135263-135313)
[»] scaffold0512 (1 HSPs)
scaffold0512 (114-174)||(4974-5034)
[»] scaffold0311 (1 HSPs)
scaffold0311 (199-243)||(10509-10553)
[»] scaffold0227 (1 HSPs)
scaffold0227 (180-228)||(7330-7378)


Alignment Details
Target: chr7 (Bit Score: 215; Significance: 1e-118; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 29763014 - 29763256
Alignment:
Q  1 cttactagtcactttactctctatttggatagagatgctgttctccttgcttctcaggtatctcattaatttctactctttttggttagcaagtgttcat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29763014 cttactagtcactttactctctatttggatagagatgctgttctccttgcttctcaggtatctcattaatttctactctttttggttagcaagtgttcat 29763113  T
Q  101 tatgtgacttctgagctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgtgtaactacacttaattatgtgatttt 200  Q
    || ||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  29763114 tacgtgacttctgagctatgaagcacggacactcctcggattaggcgtgtcctgatgtcggacacgtgtcgtgtgtaactacacttaattatgtgatttt 29763213  T
Q  201 ttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    |||||||||| |||||||||||||||||||||||  |||||||    
T  29763214 ttcaaattataagttgtgttggtgtgtcagtgtctatgtcgtg 29763256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 114 - 210
Target Start/End: Complemental strand, 30813918 - 30813822
Alignment:
Q  114 agctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgtgtaactacacttaattatgtgattttttcaaattat 210  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||   |   ||||| |||||| |||||||| ||||| |||||||||    
T  30813918 agctatgaagcacggacactcctcggattaggcgtgttctgatgtcggacacgcaacacctgtaattacactgaattatgtaattttctcaaattat 30813822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 5409771 - 5409829
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||    
T  5409771 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgt 5409829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 174 - 242
Target Start/End: Original strand, 11061089 - 11061157
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgt 242  Q
    ||||| || ||| |||||||||||||||||||||||| || ||||| ||||||||||||||||||||||    
T  11061089 tgtaattatactaaattatgtgattttttcaaattattagctgtgtcggtgtgtcagtgtccgtgtcgt 11061157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 115 - 174
Target Start/End: Complemental strand, 598328 - 598269
Alignment:
Q  115 gctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||||||| |||| ||||||||||| | |||||||||||||||||||||    
T  598328 gctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgt 598269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 115 - 174
Target Start/End: Complemental strand, 21864928 - 21864869
Alignment:
Q  115 gctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||| ||||||||||||||||| ||||| | |||||||||||||||||||||    
T  21864928 gctatgaagcacagacactcctcgaattagacgtgtcccggtgtcggacacgtgtcgtgt 21864869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 115 - 174
Target Start/End: Original strand, 43027403 - 43027462
Alignment:
Q  115 gctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||||||||||| ||| ||||||||||| | |||||||||||||||||||||    
T  43027403 gctatgaagcacggacactcatcggattaggcgtgtcccggtgtcggacacgtgtcgtgt 43027462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 15680928 - 15680870
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||||||||||||||||| |||||   |||||||||||||||||||||    
T  15680928 ctatgaagcacggacactcctcgaattagacgtgtctcggtgtcggacacgtgtcgtgt 15680870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 21880271 - 21880213
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||||||||| |||| ||||||||||| ||||||||||||| |||||||||    
T  21880271 ctatgaagcacggacacttctcggattaggcgtgtcctggtgtcggacatgtgtcgtgt 21880213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 121 - 166
Target Start/End: Complemental strand, 43250118 - 43250073
Alignment:
Q  121 aagcacggacactcctcgaattaggcgtgttctggtgtcggacacg 166  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  43250118 aagcacggacactcctcgaattaggcgtgtcctggtgtcggacacg 43250073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 8234192 - 8234132
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtc 234  Q
    |||||||||||| |||||||| ||||||||||||||| |||||||| |||||||| |||||    
T  8234192 tgtaactacactgaattatgttattttttcaaattattagttgtgtcggtgtgtctgtgtc 8234132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 9408347 - 9408407
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtc 234  Q
    ||||| |||||| |||||||||||||||||||||||| | |||||| ||||||||||||||    
T  9408347 tgtaattacactaaattatgtgattttttcaaattattaattgtgtcggtgtgtcagtgtc 9408407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 115 - 170
Target Start/End: Complemental strand, 1433579 - 1433524
Alignment:
Q  115 gctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtc 170  Q
    |||||||||||||||||||||||| ||||| ||||| |||||||||||||| ||||    
T  1433579 gctatgaagcacggacactcctcggattagacgtgtcctggtgtcggacacatgtc 1433524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 111 - 174
Target Start/End: Complemental strand, 7438841 - 7438778
Alignment:
Q  111 ctgagctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||| ||||||||||||||||||||| ||||||||||||| || |||||| ||| |||||||||    
T  7438841 ctgacctatgaagcacggacactccttgaattaggcgtgtcctagtgtcgcacatgtgtcgtgt 7438778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 9778624 - 9778566
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||||||||| | ||||||||||| | |||||||||||||||| ||||    
T  9778624 ctatgaagcacggacactccttggattaggcgtgtcccggtgtcggacacgtgttgtgt 9778566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 17852119 - 17852065
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtc 170  Q
    |||||||||||||||||||||||||||||| ||||   |||||||||||||||||    
T  17852119 ctatgaagcacggacactcctcgaattaggtgtgtctcggtgtcggacacgtgtc 17852065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 24339772 - 24339714
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||| ||||||||| ||||||||||| | ||||||||| |||||||||||    
T  24339772 ctatgaagcacgggcactcctcggattaggcgtgtcccggtgtcggatacgtgtcgtgt 24339714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 174
Target Start/End: Complemental strand, 13770810 - 13770757
Alignment:
Q  121 aagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||||| ||| ||||||||||||| |||||||||||||||| ||||    
T  13770810 aagcacggacactcttcggattaggcgtgttccggtgtcggacacgtgttgtgt 13770757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 24339688 - 24339619
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||| |||||||||||||||||||||||| || ||||| || |||||| ||||| |||||||    
T  24339688 tgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcaatgtccatgtcgtg 24339619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 27945087 - 27945018
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||| |||||||| ||||| ||||||||| ||| |||| || ||||||||||||||||||||    
T  27945087 tgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtcgtg 27945018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 240
Target Start/End: Original strand, 18215144 - 18215265
Alignment:
Q  123 gcacggacactcctcgaattaggcgtgttctggtgtcggacacgt----gtcgtgtgtaactacacttaattatgtgattttttcaaattatgagttgtg 218  Q
    |||||||||||||||  ||||||||||| | |||||||||||||     | |   ||||||||||||  ||||||||||||||||||||||| || || |    
T  18215144 gcacggacactcctcagattaggcgtgtcccggtgtcggacacgacaccgacacttgtaactacactgcattatgtgattttttcaaattattagctgcg 18215243  T
Q  219 ttggtgtgtcagtgtccgtgtc 240  Q
    | || |||| ||||||||||||    
T  18215244 tcggcgtgttagtgtccgtgtc 18215265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 32093954 - 32094013
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgt-tctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||| |||||||||| |||||||||||  | |||||||||||||||||||||    
T  32093954 ctatgaagcacgaacactcctcggattaggcgtgtccccggtgtcggacacgtgtcgtgt 32094013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 14729824 - 14729770
Alignment:
Q  114 agctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtg 168  Q
    |||||||||| |||||||||||||| |||| |||||| | |||||||||||||||    
T  14729824 agctatgaagtacggacactcctcggattaagcgtgtcccggtgtcggacacgtg 14729770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 165
Target Start/End: Complemental strand, 6490835 - 6490786
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacac 165  Q
    ||||||||||||||||||||||| |||| |||||| | ||||||||||||    
T  6490835 ctatgaagcacggacactcctcggattaagcgtgtcccggtgtcggacac 6490786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 174
Target Start/End: Original strand, 11665370 - 11665427
Alignment:
Q  117 tatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||| |||||| |||||  |||||  |||||||||||||||||||||    
T  11665370 tatgaagcacggacattcctcgtattagatgtgtttcggtgtcggacacgtgtcgtgt 11665427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 13770737 - 13770668
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||| |||||||| ||||||| ||||||| || ||||| || || |||||||||||||||||    
T  13770737 tgtaattacactgaattatgtaatttttttaaattattagctgtgtcggcgtatcagtgtccgtgtcgtg 13770668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 24105724 - 24105655
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||| ||| |||  ||||||||||||||| || ||||| || ||||||||||||||||||||    
T  24105724 tgtaattacactgaatcatgcaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtg 24105655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 235
Target Start/End: Complemental strand, 25481948 - 25481887
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtcc 235  Q
    ||||| |||||| |||||||||||||||||||||||| || ||||| || |||||| |||||    
T  25481948 tgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtcc 25481887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 170
Target Start/End: Original strand, 32287404 - 32287457
Alignment:
Q  117 tatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtc 170  Q
    |||||||||||||||||||||| |||||| |||| | |||||||||||| ||||    
T  32287404 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacttgtc 32287457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 3991370 - 3991318
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtg 226  Q
    ||||| || ||| |||||||||||||||||||||||| |||||||| ||||||    
T  3991370 tgtaattatactgaattatgtgattttttcaaattattagttgtgtcggtgtg 3991318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 159
Target Start/End: Complemental strand, 35862070 - 35862027
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtc 159  Q
    ||||||||||||||||||||||| ||||||||||| || |||||    
T  35862070 ctatgaagcacggacactcctcggattaggcgtgtcctcgtgtc 35862027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 243
Target Start/End: Original strand, 43027496 - 43027551
Alignment:
Q  188 attatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||||||||||||||||||||| || || || |  ||||||||||||||||||||    
T  43027496 attatgtgattttttcaaattattagctgggtcgccgtgtcagtgtccgtgtcgtg 43027551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 2334379 - 2334321
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||| ||||||||||||||| ||||| ||||||   |||||||||| |||||||||    
T  2334379 ctatgaaacacggacactcctcggattagacgtgtttcagtgtcggacatgtgtcgtgt 2334321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 165
Target Start/End: Original strand, 10230023 - 10230073
Alignment:
Q  115 gctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacac 165  Q
    ||||||||||||||| |||||| | || ||||||||||||||||| |||||    
T  10230023 gctatgaagcacggaaactccttggatcaggcgtgttctggtgtccgacac 10230073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 11831478 - 11831424
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtc 228  Q
    ||||| |||||| |||||| ||||||||||||||||| |||||||| | ||||||    
T  11831478 tgtaattacactaaattatatgattttttcaaattattagttgtgtcgatgtgtc 11831424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 174
Target Start/End: Original strand, 27229244 - 27229298
Alignment:
Q  120 gaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||| ||||| |||||||||||||||||| || |||||| |||||| ||||||    
T  27229244 gaagcatggacattcctcgaattaggcgtgtcctagtgtcgaacacgtatcgtgt 27229298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 28155674 - 28155624
Alignment:
Q  115 gctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacac 165  Q
    ||||||||||||||||| |||| | ||||||||||| |||||||| |||||    
T  28155674 gctatgaagcacggacattccttggattaggcgtgtcctggtgtccgacac 28155624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 32094033 - 32094103
Alignment:
Q  174 tgtaactacacttaattatgtgatttt-ttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||| |||||||||||||| |||||||||| |||||||||||  ||| |||||  ||||||||    
T  32094033 tgtaattacactgaattatgtgatttttttcaaattattagttgtgttggcatgttagtgtttgtgtcgtg 32094103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 35861997 - 35861951
Alignment:
Q  187 aattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgt 233  Q
    |||||||||||||||||||||||| |||||||| || |||| |||||    
T  35861997 aattatgtgattttttcaaattattagttgtgtcggcgtgttagtgt 35861951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 170
Target Start/End: Original strand, 40287306 - 40287356
Alignment:
Q  120 gaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtc 170  Q
    ||||||||||||||||||| ||||||| ||| | ||||||||||| |||||    
T  40287306 gaagcacggacactcctcggattaggcatgtcccggtgtcggacatgtgtc 40287356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 174
Target Start/End: Original strand, 20545185 - 20545242
Alignment:
Q  117 tatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||| ||||||||||||||||  ||||| |  |||||||||| |||||||||    
T  20545185 tatgaagcacagacactcctcgaattaaacgtgtccccgtgtcggacatgtgtcgtgt 20545242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 174
Target Start/End: Original strand, 27732189 - 27732242
Alignment:
Q  121 aagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||||  |||||||||| |||| |||||||||||||  ||||||||    
T  27732189 aagcacggacacttttcgaattaggtgtgtcctggtgtcggacatatgtcgtgt 27732242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 149
Target Start/End: Complemental strand, 27945137 - 27945104
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtg 149  Q
    |||||||||||||||||||||||| |||||||||    
T  27945137 ctatgaagcacggacactcctcgagttaggcgtg 27945104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 242
Target Start/End: Original strand, 5409857 - 5409917
Alignment:
Q  182 cacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgt 242  Q
    |||| |||||||||||||||||||||||| || ||| |  | |||||||||||| ||||||    
T  5409857 cactgaattatgtgattttttcaaattattagctgtatcagcgtgtcagtgtccatgtcgt 5409917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 162
Target Start/End: Original strand, 9408265 - 9408309
Alignment:
Q  118 atgaagcacggacactcctcgaattaggcgtgttctggtgtcgga 162  Q
    |||||||||||||| || ||| |||||||||||| ||||||||||    
T  9408265 atgaagcacggacattcttcggattaggcgtgttttggtgtcgga 9408309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 219
Target Start/End: Original strand, 11665466 - 11665498
Alignment:
Q  187 aattatgtgattttttcaaattatgagttgtgt 219  Q
    |||||||||||||||||||||||| ||||||||    
T  11665466 aattatgtgattttttcaaattattagttgtgt 11665498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 243
Target Start/End: Original strand, 11722124 - 11722180
Alignment:
Q  187 aattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    |||||||||||||| ||||||| | ||  |||| || ||||||||||||||||||||    
T  11722124 aattatgtgattttctcaaattgttagcggtgtcggcgtgtcagtgtccgtgtcgtg 11722180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 26033474 - 26033510
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattat 210  Q
    ||||| |||||| ||||||||||||||||||||||||    
T  26033474 tgtaattacactgaattatgtgattttttcaaattat 26033510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 243
Target Start/End: Complemental strand, 26733337 - 26733281
Alignment:
Q  187 aattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    |||||||||||||| ||||||||| ||  |||| |  ||||||||||||||||||||    
T  26733337 aattatgtgattttgtcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtg 26733281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 150
Target Start/End: Original strand, 29812596 - 29812632
Alignment:
Q  114 agctatgaagcacggacactcctcgaattaggcgtgt 150  Q
    |||||||||||||||||||| |||| |||||||||||    
T  29812596 agctatgaagcacggacacttctcggattaggcgtgt 29812632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 170
Target Start/End: Original strand, 29998974 - 29999026
Alignment:
Q  118 atgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtc 170  Q
    |||||||| |||||||||||  ||||| ||||||  |||||||||||||||||    
T  29998974 atgaagcatggacactcctccgattagacgtgtttaggtgtcggacacgtgtc 29999026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 40131937 - 40131989
Alignment:
Q  114 agctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacg 166  Q
    ||||||||||||| ||||||||||| ||||| ||||| |  ||||||||||||    
T  40131937 agctatgaagcacagacactcctcggattagacgtgtccctgtgtcggacacg 40131989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 4e-22; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 114 - 242
Target Start/End: Complemental strand, 55401196 - 55401053
Alignment:
Q  114 agctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt---------------gtaactacacttaattatgtgatt 198  Q
    ||||||||||||||||||||||||| |||||||||||   |||||||||||||||||||||               |||| |||||| ||||||||||||    
T  55401196 agctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgatt 55401097  T
Q  199 ttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgt 242  Q
    |||||||||||| |||||||| || || ||||||||||||||||    
T  55401096 ttttcaaattattagttgtgtcggcgtatcagtgtccgtgtcgt 55401053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 116 - 231
Target Start/End: Complemental strand, 11610628 - 11610510
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacg---tgtcgtgtgtaactacacttaattatgtgattttttcaaattatga 212  Q
    ||||||||||||||||||||||  ||||||||||| | | |||||||||||   || |   |||||||||||| |||||||||||||||| ||||||| |    
T  11610628 ctatgaagcacggacactcctcagattaggcgtgtcccgatgtcggacacgacttgacacttgtaactacactgaattatgtgatttttttaaattatta 11610529  T
Q  213 gttgtgttggtgtgtcagt 231  Q
    |  ||||||| ||||||||    
T  11610528 gcggtgttggcgtgtcagt 11610510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 24204983 - 24205031
Alignment:
Q  118 atgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacg 166  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  24204983 atgaagcacggacactcctcgaattaggcgtgtcctggtgtcggacacg 24205031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 115 - 174
Target Start/End: Complemental strand, 27505371 - 27505312
Alignment:
Q  115 gctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||||||||||||||| ||||||| ||| | |||||||||||||||||||||    
T  27505371 gctatgaagcacggacactcctcggattaggcatgtcccggtgtcggacacgtgtcgtgt 27505312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 174 - 240
Target Start/End: Original strand, 8587034 - 8587100
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtc 240  Q
    ||||| ||||||||||||||||||||||||||||||  || ||||| || |||||||||||||||||    
T  8587034 tgtaattacacttaattatgtgattttttcaaattactagatgtgtcggcgtgtcagtgtccgtgtc 8587100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 174
Target Start/End: Original strand, 4987222 - 4987278
Alignment:
Q  118 atgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||| |||||||||||||| ||||||||||| | |||||||||||||||||||||    
T  4987222 atgaagtacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgt 4987278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 10954992 - 10954932
Alignment:
Q  180 tacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtc 240  Q
    |||||| |||||||||||||||||||||||| |||||||| || |||||||||| ||||||    
T  10954992 tacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgttcgtgtc 10954932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 180 - 243
Target Start/End: Original strand, 10335305 - 10335368
Alignment:
Q  180 tacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    |||||| || ||||||| ||||||||||||| |||||||| || ||||||||||||||||||||    
T  10335305 tacactaaaatatgtgactttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtg 10335368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 20503584 - 20503526
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||||||||||| ||||||||||| | |||||| |||| |||||||||    
T  20503584 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcagacatgtgtcgtgt 20503526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 34185052 - 34185106
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtc 170  Q
    ||||||||||||||||||||||| ||||||||||| | |||||||||||| ||||    
T  34185052 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacatgtc 34185106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 40993275 - 40993333
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||| |||||||||||| ||||||||||| | ||||||||||| |||||||||    
T  40993275 ctatgaagcatggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgt 40993333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 41961579 - 41961637
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||||||||| |||| ||||||||||| |  ||||||||||||||||||||    
T  41961579 ctatgaagcacggacacttctcggattaggcgtgtcccagtgtcggacacgtgtcgtgt 41961637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 174
Target Start/End: Original strand, 15999951 - 16000008
Alignment:
Q  117 tatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||| |||||||||||||| | ||||||||||| | |||||||||||||||||||||    
T  15999951 tatgatgcacggacactccttggattaggcgtgtcccggtgtcggacacgtgtcgtgt 16000008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 28918047 - 28917978
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||| |||||||||||||||||||||||| || | ||| || |||||||| |||||||||||    
T  28918047 tgtaattacactgaattatgtgattttttcaaattattagctatgtcggcgtgtcagtttccgtgtcgtg 28917978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 174 - 242
Target Start/End: Original strand, 10268499 - 10268567
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgt 242  Q
    ||||| |||||| |||||||||||||||||||||||| |  ||||| || |||||||||||| ||||||    
T  10268499 tgtaattacactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccatgtcgt 10268567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 25775624 - 25775576
Alignment:
Q  118 atgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacg 166  Q
    |||||||||| |||||||||| ||||||||||| |||||||||||||||    
T  25775624 atgaagcacgaacactcctcggattaggcgtgtcctggtgtcggacacg 25775576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 243
Target Start/End: Original strand, 2620072 - 2620135
Alignment:
Q  180 tacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||||||||||||||||||| |||||| || ||| |||| || ||||||||||||| ||||||    
T  2620072 tacacttaattatgtgattttctcaaatgattagtggtgtcggcgtgtcagtgtccgagtcgtg 2620135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 3631796 - 3631745
Alignment:
Q  123 gcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||||||| | ||||||||| ||||||||||||| |||||||||    
T  3631796 gcacggacactcctcggactaggcgtgtcctggtgtcggacatgtgtcgtgt 3631745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 233
Target Start/End: Original strand, 4987304 - 4987363
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgt 233  Q
    ||||| |||||| |||||||||||||||||||||||| || ||||| || ||||||||||    
T  4987304 tgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 4987363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 179
Target Start/End: Complemental strand, 11666070 - 11666011
Alignment:
Q  120 gaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgtgtaac 179  Q
    ||||||||||||||||| ||||||||||||||| | | || |||||||||||||| ||||    
T  11666070 gaagcacggacactccttgaattaggcgtgttccgatatcagacacgtgtcgtgtctaac 11666011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 243
Target Start/End: Original strand, 16000035 - 16000098
Alignment:
Q  180 tacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    |||||| |||||||| ||||||| ||||||| |||||||| || ||||||||||| ||||||||    
T  16000035 tacactgaattatgttatttttttaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtg 16000098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 237
Target Start/End: Complemental strand, 28812561 - 28812499
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgt 237  Q
    |||||||||||| ||||||||||||| |||||||||| |||||||| || ||||| ||||||||    
T  28812561 tgtaactacactgaattatgtgatttcttcaaattattagttgtgtcggcgtgtc-gtgtccgt 28812499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 167
Target Start/End: Complemental strand, 40052431 - 40052380
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgt 167  Q
    |||||||||||| |||||||||| ||||||||||| | ||||||||||||||    
T  40052431 ctatgaagcacgaacactcctcggattaggcgtgtcccggtgtcggacacgt 40052380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 3163971 - 3164021
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacg 166  Q
    |||||||||| ||||||||||||||||||||||||   |||||||||||||    
T  3163971 ctatgaagcatggacactcctcgaattaggcgtgtctcggtgtcggacacg 3164021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 11252095 - 11252037
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||| ||||||||||| ||||||||||||| | || ||||||||||| ||||    
T  11252095 ctatgaagcacagacactcctcggattaggcgtgttccgatgccggacacgtgttgtgt 11252037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 34910363 - 34910309
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtc 228  Q
    ||||| |||||| |||||||||||||||||||||||| |||||||| || |||||    
T  34910363 tgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtc 34910309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 208
Target Start/End: Original strand, 5407199 - 5407294
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtc---gtgtgtaactacacttaattatgtgattttttcaaatt 208  Q
    |||||||||| |||||||| | | ||||||||||| |||| ||||||||||||||   || | ||| |||| | |||||||||||||| |||||||    
T  5407199 ctatgaagcatggacactctttggattaggcgtgtcctggcgtcggacacgtgtctgtgtctataattacaatgaattatgtgattttctcaaatt 5407294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 14216938 - 14216869
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||| |||||| |||| |||| ||||||| |||||||| |  ||||||||||||||||||||    
T  14216938 tgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtgtccgtgtcgtg 14216869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 14223067 - 14222998
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||| |||||| |||| |||| ||||||| |||||||| |  ||||||||||||||||||||    
T  14223067 tgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtgtccgtgtcgtg 14222998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 15796307 - 15796376
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||| |||||| ||||||||||||||||| |  ||||| || |||||| |||||||||||||    
T  15796307 tgtaattacactgaattatatgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtg 15796376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 26492218 - 26492287
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||| |||| | ||||||||||||||||| || | ||| || ||||||||||||||||||||    
T  26492218 tgtaattacactgaattgtatgattttttcaaattattagctctgtcggcgtgtcagtgtccgtgtcgtg 26492287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 165
Target Start/End: Complemental strand, 1389956 - 1389908
Alignment:
Q  117 tatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacac 165  Q
    |||||||||||||||||||| | ||||||| ||| ||||||||||||||    
T  1389956 tatgaagcacggacactccttggattaggcatgtcctggtgtcggacac 1389908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 150
Target Start/End: Original strand, 4990910 - 4990946
Alignment:
Q  114 agctatgaagcacggacactcctcgaattaggcgtgt 150  Q
    ||||||||||||||||||||||||| |||||||||||    
T  4990910 agctatgaagcacggacactcctcggattaggcgtgt 4990946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 174
Target Start/End: Complemental strand, 10955075 - 10955013
Alignment:
Q  115 gctatgaagcacggacact---cctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||||||||||   ||||| ||||||||||| |  ||||||||||||||||||||    
T  10955075 gctatgaagcacggacactactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgt 10955013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 174
Target Start/End: Original strand, 15796221 - 15796281
Alignment:
Q  114 agctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||||| |||||| | | ||||||||||||| ||||| |||||||||| ||||    
T  15796221 agctatgaagcacgaacactctttggattaggcgtgttccggtgttggacacgtgttgtgt 15796281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 20503511 - 20503451
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtc 234  Q
    ||||| |||||| |||||||| |||||||||||||||  ||||||| || |||||||||||    
T  20503511 tgtaattacactgaattatgtcattttttcaaattatttgttgtgtcggcgtgtcagtgtc 20503451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 174
Target Start/End: Complemental strand, 28918120 - 28918064
Alignment:
Q  118 atgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||| |||||||||| | ||||||||||| |  ||||||||||||||||||||    
T  28918120 atgaagcagggacactccttggattaggcgtgtcccagtgtcggacacgtgtcgtgt 28918064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 243
Target Start/End: Original strand, 3164044 - 3164107
Alignment:
Q  180 tacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    |||||| |||||||||||||||||||||||| || ||||| |  ||| || |||||||||||||    
T  3164044 tacactgaattatgtgattttttcaaattattagctgtgtcgacgtgccattgtccgtgtcgtg 3164107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 5440967 - 5441026
Alignment:
Q  116 ctatgaagcacggacactcctcgaattagg-cgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||||||||||||||||||||| |||||   ||||| ||||| |||||||||    
T  5440967 ctatgaagcacggacactcctcgaattaggccgtgtctcggtgttggacatgtgtcgtgt 5441026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 243
Target Start/End: Complemental strand, 14979221 - 14979158
Alignment:
Q  180 tacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    |||||| |||||||||||||||||||||||| || ||||| || ||| || ||||| |||||||    
T  14979221 tacactgaattatgtgattttttcaaattattagctgtgtcggcgtgccattgtccttgtcgtg 14979158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 21479163 - 21479104
Alignment:
Q  175 gtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtc 234  Q
    |||| |||||| |||| ||||||||||||||||||| || ||||| || |||||||||||    
T  21479163 gtaattacactgaattgtgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 21479104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 234
Target Start/End: Complemental strand, 40052365 - 40052318
Alignment:
Q  187 aattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtc 234  Q
    |||||||||||||||||||||||| || ||||| || |||||||||||    
T  40052365 aattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 40052318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 210
Target Start/End: Complemental strand, 4201436 - 4201406
Alignment:
Q  180 tacacttaattatgtgattttttcaaattat 210  Q
    |||||||||||||||||||||||||||||||    
T  4201436 tacacttaattatgtgattttttcaaattat 4201406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 150
Target Start/End: Complemental strand, 8842448 - 8842414
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgt 150  Q
    ||||||||||||||||||||||| |||||||||||    
T  8842448 ctatgaagcacggacactcctcggattaggcgtgt 8842414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 164
Target Start/End: Original strand, 12704597 - 12704639
Alignment:
Q  122 agcacggacactcctcgaattaggcgtgttctggtgtcggaca 164  Q
    ||||||||||||||| | ||||| |||||||||||||||||||    
T  12704597 agcacggacactcctaggattagacgtgttctggtgtcggaca 12704639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 14209159 - 14209105
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtc 228  Q
    ||||| |||||| |||||||||||||||| ||||||| |||||||| || |||||    
T  14209159 tgtaattacactgaattatgtgattttttaaaattattagttgtgtcggcgtgtc 14209105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 235
Target Start/End: Complemental strand, 25775555 - 25775493
Alignment:
Q  174 tgtaactacacttaattatgtgatt-ttttcaaattatgagttgtgttggtgtgtcagtgtcc 235  Q
    ||||| |||||| |||||||||||| |||||||||||| |  |||||||| ||||||||||||    
T  25775555 tgtaattacactgaattatgtgattattttcaaattattaaatgtgttggcgtgtcagtgtcc 25775493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 28812645 - 28812587
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||| |||| ||||||||||| ||||||||||| ||| ||||||||| || ||||||    
T  28812645 ctatgaggcacagacactcctcggattaggcgtgtcctgctgtcggacatgtatcgtgt 28812587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 49651716 - 49651774
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||||||||| |||| |||||| |||| | ||||||||| | |||||||||    
T  49651716 ctatgaagcacggacacttctcggattaggtgtgtcccggtgtcggatatgtgtcgtgt 49651774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 243
Target Start/End: Original strand, 750644 - 750701
Alignment:
Q  187 aattatgtgattttttcaaattatgagttgtgttggtgtgtc-agtgtccgtgtcgtg 243  Q
    ||||||||||| |||||||||||| |||||||| |  ||||| |||||||||||||||    
T  750644 aattatgtgatattttcaaattattagttgtgtcgccgtgtcaagtgtccgtgtcgtg 750701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 1509585 - 1509540
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgt 219  Q
    ||||| |||||| |||||||||||||||||||||||| || |||||    
T  1509585 tgtaattacactaaattatgtgattttttcaaattattagctgtgt 1509540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 3865586 - 3865635
Alignment:
Q  191 atgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtc 240  Q
    ||||| |||||||||||||| || ||||| || |||||||||||||||||    
T  3865586 atgtggttttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 3865635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 4466540 - 4466589
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacac 165  Q
    |||||||||||||||||||||||||| || ||||| |  |||||||||||    
T  4466540 ctatgaagcacggacactcctcgaataagccgtgtcccagtgtcggacac 4466589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 150
Target Start/End: Original strand, 8789489 - 8789522
Alignment:
Q  117 tatgaagcacggacactcctcgaattaggcgtgt 150  Q
    |||||||||||||||||||||| |||||||||||    
T  8789489 tatgaagcacggacactcctcggattaggcgtgt 8789522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 10318064 - 10318113
Alignment:
Q  191 atgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtc 240  Q
    |||||| ||||||||||||| || ||||| || |||||||||||||||||    
T  10318064 atgtgactttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 10318113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 174
Target Start/End: Complemental strand, 14217021 - 14216964
Alignment:
Q  117 tatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||||| |||| |||||| |||| |  |||||| |||||||||||||    
T  14217021 tatgaagcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgt 14216964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 174
Target Start/End: Complemental strand, 14223150 - 14223093
Alignment:
Q  117 tatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||||| |||| |||||| |||| |  |||||| |||||||||||||    
T  14223150 tatgaagcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgt 14223093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 14747608 - 14747547
Alignment:
Q  174 tgtaactacacttaattatgtgatttttt-caaattatgagttgtgttggtgtgtcagtgtc 234  Q
    ||||| |||||| |||||||||||||||| |||||||| || ||||| || |||||||||||    
T  14747608 tgtaattacactaaattatgtgatttttttcaaattattagctgtgtcggcgtgtcagtgtc 14747547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 26508156 - 26508111
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgt 219  Q
    ||||| |||||| |||||||||||||||||||||||| || |||||    
T  26508156 tgtaattacactgaattatgtgattttttcaaattattagctgtgt 26508111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 166
Target Start/End: Complemental strand, 26665242 - 26665205
Alignment:
Q  129 acactcctcgaattaggcgtgttctggtgtcggacacg 166  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  26665242 acactccttgaattaggggtgttctggtgtcggacacg 26665205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 41961663 - 41961732
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||  ||| ||||||| |||||||||||| |||||||  || ||||||||||| ||||||||    
T  41961663 tgtaattacaccgaataatgtgatattttcaaattattagttgtgacggcgtgtcagtgtctgtgtcgtg 41961732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 165
Target Start/End: Complemental strand, 1509681 - 1509637
Alignment:
Q  121 aagcacggacactcctcgaattaggcgtgttctggtgtcggacac 165  Q
    |||||||||||||||||  ||||||||||| | ||||||||||||    
T  1509681 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac 1509637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 3610678 - 3610610
Alignment:
Q  175 gtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    |||| |||||| | |||||| ||||||| ||||||| |  |||||||| ||||||||||| ||||||||    
T  3610678 gtaattacactgagttatgttatttttttaaattattaactgtgttggcgtgtcagtgtctgtgtcgtg 3610610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 160
Target Start/End: Complemental strand, 13807273 - 13807229
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcg 160  Q
    ||||||| ||||||||||||||||||||||| ||| || ||||||    
T  13807273 ctatgaaacacggacactcctcgaattaggcatgtcctagtgtcg 13807229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 170
Target Start/End: Complemental strand, 17276848 - 17276792
Alignment:
Q  114 agctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtc 170  Q
    |||||||||||||||||||| |||| |||||| | ||   |||||||||||||||||    
T  17276848 agctatgaagcacggacacttctcggattaggtgcgtctcggtgtcggacacgtgtc 17276792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 18427068 - 18427012
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgt 172  Q
    ||||||| ||||||||||||||  |||||| |||| | |||| ||||||||||||||    
T  18427068 ctatgaaacacggacactcctcagattaggtgtgtcccggtgccggacacgtgtcgt 18427012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 25948906 - 25948966
Alignment:
Q  180 tacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtc 240  Q
    |||||| |||||||||||||||||||||||| ||  || | ||  ||||||||||||||||    
T  25948906 tacactgaattatgtgattttttcaaattattagccgtatcggcatgtcagtgtccgtgtc 25948966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 29508484 - 29508424
Alignment:
Q  180 tacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtc 240  Q
    |||||| |||||| ||||||||||||||||| ||| || | ||||||||| ||||| ||||    
T  29508484 tacactgaattatatgattttttcaaattattagtggtatcggtgtgtcaatgtccatgtc 29508424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 6e-21; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 240
Target Start/End: Original strand, 36450692 - 36450833
Alignment:
Q  114 agctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtg---------------tgtaactacacttaattatgtgatt 198  Q
    ||||||||||||| ||||||||||| ||||||||||| ||||||||||||||| ||||||               ||||| |||||| |||| |||||||    
T  36450692 agctatgaagcacagacactcctcggattaggcgtgtcctggtgtcggacacgcgtcgtgtccgacacctacacttgtaattacactgaattctgtgatt 36450791  T
Q  199 ttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtc 240  Q
    |||||||||||| |||||||| || |||||||||||||||||    
T  36450792 ttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtc 36450833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 114 - 174
Target Start/End: Complemental strand, 14134820 - 14134760
Alignment:
Q  114 agctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  14134820 agctatgaaacacggacactcctcgaattaggcgtgtcctggtgacggacacgtgtcgtgt 14134760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 44067644 - 44067596
Alignment:
Q  118 atgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacg 166  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  44067644 atgaagcacggacactcctcgaattaggcgtgtcctggtgtcggacacg 44067596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 115 - 174
Target Start/End: Original strand, 6065585 - 6065644
Alignment:
Q  115 gctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||||||||||||| |||||| |||||||| ||||||||||| |||||||||    
T  6065585 gctatgaagcacggacactccttgaattatgcgtgttccggtgtcggacatgtgtcgtgt 6065644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 174
Target Start/End: Complemental strand, 5813707 - 5813653
Alignment:
Q  120 gaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||||||||| |||||||||||| | |||||||||||||||||||||    
T  5813707 gaagcacggacactcctccaattaggcgtgtcccggtgtcggacacgtgtcgtgt 5813653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 18407838 - 18407780
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||||||||||||| |||||||||||| || |||||||||| |||||||||    
T  18407838 ctatgaagcacggacactcctccaattaggcgtgtcctagtgtcggacatgtgtcgtgt 18407780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 180 - 237
Target Start/End: Original strand, 15816148 - 15816205
Alignment:
Q  180 tacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgt 237  Q
    |||||| |||||||||||||||||||||||| |||||||| || ||||||||||||||    
T  15816148 tacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgt 15816205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 243
Target Start/End: Complemental strand, 22652009 - 22651953
Alignment:
Q  187 aattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    |||||||||||||||||||||||| || ||||| || ||||||||||||||||||||    
T  22652009 aattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtg 22651953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 174
Target Start/End: Complemental strand, 22652108 - 22652048
Alignment:
Q  114 agctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||||||||||||| ||||| ||||| | |||||||||||| ||||||||    
T  22652108 agctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacatgtcgtgt 22652048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 8343446 - 8343388
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||| ||||||| ||| ||||||||||| | |||||||||||||||||||||    
T  8343446 ctatgaagcacagacactcttcggattaggcgtgtcccggtgtcggacacgtgtcgtgt 8343388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 174
Target Start/End: Complemental strand, 21465546 - 21465484
Alignment:
Q  112 tgagctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||||||||||||||||| |||||||||| | |  |||| |||||||||||||||    
T  21465546 tgagctatgaagcacggacactcctcaaattaggcgtatccctgtgttggacacgtgtcgtgt 21465484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 29510233 - 29510291
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||||||||||| |||||| |||| | ||||||||||||| |||||||    
T  29510233 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgt 29510291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 174
Target Start/End: Original strand, 3951469 - 3951534
Alignment:
Q  109 ttctgagctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||| |||||||||||||||| |||||| | |||||||||||||  ||||| ||||||||||||||    
T  3951469 ttctaagctatgaagcacggaaactccttggattaggcgtgttcccgtgtcagacacgtgtcgtgt 3951534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 8343362 - 8343293
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||| |||||||||||||||||||||||| || | ||| |||||||| ||||| ||||||||    
T  8343362 tgtaattacactaaattatgtgattttttcaaattattagctatgtcggtgtgtcggtgtcagtgtcgtg 8343293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 20873115 - 20873046
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||| |||||||||||||||||||||||| |  | ||| || ||||||||||||||||||||    
T  20873115 tgtaattacactaaattatgtgattttttcaaattattatctatgtcggcgtgtcagtgtccgtgtcgtg 20873046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 22197755 - 22197824
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||| |||||||||| ||||||||||||| || |||||||| |||| |||||| ||||||||    
T  22197755 tgtaattacactaaattatgtgaatttttcaaattattagctgtgttggcgtgttagtgtctgtgtcgtg 22197824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 174
Target Start/End: Original strand, 29447040 - 29447097
Alignment:
Q  117 tatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||||||||||| | ||||||||||| |||||||| ||||| ||||||||    
T  29447040 tatgaagcacggacactcctaggattaggcgtgtcctggtgtcagacacatgtcgtgt 29447097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 29510317 - 29510386
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| || ||| |||| ||||||||||||||||||| || ||||| || ||||||||||||||||||||    
T  29510317 tgtaattatactgaattttgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtg 29510386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 174
Target Start/End: Original strand, 15816056 - 15816116
Alignment:
Q  114 agctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||||||||||| |||| ||||||||||| | |||||||||  ||||||||||    
T  15816056 agctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggattcgtgtcgtgt 15816116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 164
Target Start/End: Complemental strand, 3658271 - 3658224
Alignment:
Q  117 tatgaagcacggacactcctcgaattaggcgtgttctggtgtcggaca 164  Q
    ||||||||||||||||||||||||||||||||||  || |||||||||    
T  3658271 tatgaagcacggacactcctcgaattaggcgtgtcttgatgtcggaca 3658224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 22197671 - 22197725
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtc 170  Q
    |||| |||||||||||||||||  |||||||||| || |||||||||||||||||    
T  22197671 ctataaagcacggacactcctcagattaggcgtgatccggtgtcggacacgtgtc 22197725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 174
Target Start/End: Original strand, 22943301 - 22943347
Alignment:
Q  128 gacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||| ||||||||||| | |||||||||||||||||||||    
T  22943301 gacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgt 22943347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 174 - 232
Target Start/End: Complemental strand, 24613566 - 24613509
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtg 232  Q
    ||||| |||||||||||||||||| |||||||||||| || ||||| ||||||||||||    
T  24613566 tgtaattacacttaattatgtgat-ttttcaaattattagctgtgtcggtgtgtcagtg 24613509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 2572069 - 2572138
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||| |||||||||||||||||||||||| || ||||| |  ||||| || |||||||||||    
T  2572069 tgtaattacactaaattatgtgattttttcaaattattaggtgtgtcgacgtgtcggtatccgtgtcgtg 2572138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 240
Target Start/End: Original strand, 13436990 - 13437043
Alignment:
Q  187 aattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtc 240  Q
    |||||||||||||||||||||||| || ||||| || |||||||||||| ||||    
T  13436990 aattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtc 13437043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 18170495 - 18170564
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||| | |||||||| ||||||||||||| | | |||||| || ||||||||||||||||||||    
T  18170495 tgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgtgtcgtg 18170564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 18634063 - 18634132
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||| | |||||||| ||||||||||||| | | |||||| || ||||||||||||||||||||    
T  18634063 tgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgtgtcgtg 18634132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 29447581 - 29447516
Alignment:
Q  109 ttctgagctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||| ||||||||||||||||||||||  ||||| | ||| | |||||||||||| ||||||||    
T  29447581 ttctgatctatgaagcacggacactcctccgattagacctgtcccggtgtcggacacatgtcgtgt 29447516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 243
Target Start/End: Complemental strand, 3677819 - 3677763
Alignment:
Q  187 aattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    |||||||||||||||| ||||||| | |||||| | ||||||||| |||||||||||    
T  3677819 aattatgtgattttttaaaattattaattgtgtcgatgtgtcagtatccgtgtcgtg 3677763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 11803389 - 11803333
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgt 172  Q
    ||||||||||||||||||||||| ||||| ||||| |  |||||||||| |||||||    
T  11803389 ctatgaagcacggacactcctcggattagacgtgtacctgtgtcggacatgtgtcgt 11803333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 13397670 - 13397622
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggaca 164  Q
    ||||||||||||||||||||| |||||||||||||   |||||||||||    
T  13397670 ctatgaagcacggacactccttgaattaggcgtgtctcggtgtcggaca 13397622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 164
Target Start/End: Original strand, 24205749 - 24205796
Alignment:
Q  117 tatgaagcacggacactcctcgaattaggcgtgttctggtgtcggaca 164  Q
    |||||| ||||||||||||||| ||||||||||||| |||||| ||||    
T  24205749 tatgaaacacggacactcctcggattaggcgtgttccggtgtcagaca 24205796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 170
Target Start/End: Original strand, 24727684 - 24727735
Alignment:
Q  119 tgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtc 170  Q
    ||||||||| ||||| |||| ||||||||||||||||| | |||||||||||    
T  24727684 tgaagcacgaacacttctcggattaggcgtgttctggtattggacacgtgtc 24727735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 150
Target Start/End: Complemental strand, 31514974 - 31514939
Alignment:
Q  115 gctatgaagcacggacactcctcgaattaggcgtgt 150  Q
    |||||||||||||||||||||||| |||||||||||    
T  31514974 gctatgaagcacggacactcctcggattaggcgtgt 31514939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 174
Target Start/End: Complemental strand, 40332307 - 40332252
Alignment:
Q  119 tgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||| ||||||||||||||| |||||||| || | ||||| |||||||||||||||    
T  40332307 tgaaacacggacactcctcggattaggcgcgtcccggtgtgggacacgtgtcgtgt 40332252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 174
Target Start/End: Original strand, 41831874 - 41831933
Alignment:
Q  115 gctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||| | |||||||||||||||||| ||||| ||| ||||||| |||| ||||||    
T  41831874 gctatgaagaatggacactcctcgaattagacgtgtcctgttgtcggatacgtatcgtgt 41831933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 162
Target Start/End: Original strand, 4673354 - 4673400
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcgga 162  Q
    ||||||||||| ||||||||| | ||||||||||||| |||||||||    
T  4673354 ctatgaagcacagacactccttggattaggcgtgttccggtgtcgga 4673400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 12570438 - 12570496
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||| ||||||||||| || ||  ||||||||||| |||||||||||||||||| ||||    
T  12570438 ctataaagcacggacaatcttcagattaggcgtgtcctggtgtcggacacgtgtagtgt 12570496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 12570664 - 12570722
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||| ||||||||||| || ||  ||||||||||| |||||||||||||||||| ||||    
T  12570664 ctataaagcacggacaatcttcagattaggcgtgtcctggtgtcggacacgtgtagtgt 12570722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 242
Target Start/End: Original strand, 24196628 - 24196678
Alignment:
Q  192 tgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgt 242  Q
    ||||||||||||||||||| |||||||| || ||||| |||||||| ||||    
T  24196628 tgtgattttttcaaattattagttgtgtcggcgtgtcggtgtccgtatcgt 24196678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 174
Target Start/End: Complemental strand, 28745632 - 28745570
Alignment:
Q  112 tgagctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||||||||||||| ||||||| | |||   |||| |||||| |||||||||    
T  28745632 tgagctatgaagcacggacactccttgaattagacttgtctcggtgacggacaggtgtcgtgt 28745570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 236
Target Start/End: Original strand, 30271304 - 30271366
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccg 236  Q
    ||||| ||||||  |||||||||||||||||||| || || ||||| || |||||||||||||    
T  30271304 tgtaattacactgcattatgtgattttttcaaatgattagctgtgtcggcgtgtcagtgtccg 30271366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 31557115 - 31557057
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||| ||| |||||| ||| | ||||||||||| ||||||||||||| |||||||||    
T  31557115 ctatgaggcatggacacaccttggattaggcgtgtcctggtgtcggacatgtgtcgtgt 31557057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 34450961 - 34451019
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||||||||| | || |||||||| |  ||||| ||||||||||||||    
T  34450961 ctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgt 34451019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 171
Target Start/End: Complemental strand, 39820550 - 39820493
Alignment:
Q  113 gagctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcg 171  Q
    ||||||||||||||||||||| |||| |||||||||| ||  |||||||||||| ||||    
T  39820550 gagctatgaagcacggacacttctcggattaggcgtg-tcccgtgtcggacacgcgtcg 39820493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 171
Target Start/End: Original strand, 926730 - 926783
Alignment:
Q  118 atgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcg 171  Q
    ||||||||||||||||||||| || | || ||| | ||||||||||||||||||    
T  926730 atgaagcacggacactcctcggataaagcatgtcccggtgtcggacacgtgtcg 926783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 4673438 - 4673507
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||| |||| | ||||||||||||||||| |  ||||| || ||||||||||| ||||||||    
T  4673438 tgtaattacactgaattttatgattttttcaaattattatctgtgtcggcgtgtcagtgtctgtgtcgtg 4673507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 215
Target Start/End: Complemental strand, 4948698 - 4948657
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagtt 215  Q
    ||||| |||||| |||||||||||||||||||||||| ||||    
T  4948698 tgtaattacactgaattatgtgattttttcaaattattagtt 4948657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 165
Target Start/End: Complemental strand, 8343086 - 8343037
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacac 165  Q
    ||||||||||| ||||||| ||| ||||||||||| | ||||||||||||    
T  8343086 ctatgaagcacagacactcttcggattaggcgtgtcccggtgtcggacac 8343037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 161
Target Start/End: Complemental strand, 17751775 - 17751730
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcgg 161  Q
    ||||||||| ||||||||||||| ||||||||||| | ||||||||    
T  17751775 ctatgaagcgcggacactcctcggattaggcgtgtcccggtgtcgg 17751730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 161
Target Start/End: Complemental strand, 17760762 - 17760717
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcgg 161  Q
    ||||||||| ||||||||||||| ||||||||||| | ||||||||    
T  17760762 ctatgaagcgcggacactcctcggattaggcgtgtcccggtgtcgg 17760717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 25566887 - 25566842
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgt 219  Q
    ||||| |||||| |||||||||||||||||||||||| || |||||    
T  25566887 tgtaattacactgaattatgtgattttttcaaattattagctgtgt 25566842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 235
Target Start/End: Original strand, 30077400 - 30077461
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtcc 235  Q
    ||||| |||||| ||||||||||| |||||||||||| || || ||||| ||||| ||||||    
T  30077400 tgtaattacactgaattatgtgatgttttcaaattattagctgcgttggcgtgtccgtgtcc 30077461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 243
Target Start/End: Original strand, 41838144 - 41838205
Alignment:
Q  182 cacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    |||| |||||||||||||||| ||||||| || ||||| |  |||||||||||||| |||||    
T  41838144 cactgaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtgtccgtatcgtg 41838205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 926822 - 926870
Alignment:
Q  195 gattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    |||||| ||||||||| ||  ||||||| ||||||||||||||||||||    
T  926822 gattttctcaaattattaggagtgttggcgtgtcagtgtccgtgtcgtg 926870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 174
Target Start/End: Complemental strand, 3025668 - 3025612
Alignment:
Q  118 atgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||||||||| ||||| |||||    ||||| ||||||||||||||    
T  3025668 atgaagcacggacactcctcggattagccgtgtcacagtgtcagacacgtgtcgtgt 3025612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 174
Target Start/End: Original strand, 4122176 - 4122236
Alignment:
Q  114 agctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||| ||||||||||||||| | | ||||| ||||||| ||||||  |||||||||||||    
T  4122176 agctacgaagcacggacactctttggattagacgtgttccggtgtccaacacgtgtcgtgt 4122236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 8343018 - 8342982
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattat 210  Q
    ||||| |||||| ||||||||||||||||||||||||    
T  8343018 tgtaattacactaaattatgtgattttttcaaattat 8342982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 13403225 - 13403177
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggaca 164  Q
    ||||||||||||||||||||| |||||| ||||||   |||||||||||    
T  13403225 ctatgaagcacggacactccttgaattaagcgtgtctcggtgtcggaca 13403177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 243
Target Start/End: Original strand, 25192373 - 25192429
Alignment:
Q  187 aattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    |||||||| | ||||||||||||| || ||||| || |||||||||||||| |||||    
T  25192373 aattatgtcactttttcaaattattagctgtgtcggcgtgtcagtgtccgtatcgtg 25192429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 6e-21; HSPs: 86)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 243
Target Start/End: Original strand, 48450548 - 48450669
Alignment:
Q  114 agctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgtgtaactacacttaattatgtgattttttcaaattatgag 213  Q
    ||||||||||||||||||||||||| ||||| ||||| ||| |||| ||||| |||       || |||||| |||||||| ||||||||||||||| ||    
T  48450548 agctatgaagcacggacactcctcggattagacgtgtcctg-tgtccgacacttgt-------aattacactaaattatgttattttttcaaattattag 48450639  T
Q  214 ttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
     |||||||| ||||||||||||||||||||    
T  48450640 ctgtgttggcgtgtcagtgtccgtgtcgtg 48450669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 111 - 174
Target Start/End: Complemental strand, 40917884 - 40917821
Alignment:
Q  111 ctgagctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||| |||||||||||||||| |||||| ||||||||||| | |||||||||||||||||||||    
T  40917884 ctgacctatgaagcacggacagtcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgt 40917821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 9828174 - 9828116
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||    
T  9828174 ctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacgtgtcgtgt 9828116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 18471414 - 18471356
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||| ||||||||||||||||||||| |||||  |||||||||||||||||||||    
T  18471414 ctatgaagtacggacactcctcgaattaggtgtgtttcggtgtcggacacgtgtcgtgt 18471356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 202
Target Start/End: Original strand, 46940748 - 46940834
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgtgtaactacacttaattatgtgatttttt 202  Q
    |||||||||||| |||||||||| ||||||||||||| ||||||||||||| |     ||||| ||||||||||||||| |||||||    
T  46940748 ctatgaagcacgaacactcctcggattaggcgtgttccggtgtcggacacgcgaaacttgtaattacacttaattatgttatttttt 46940834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 174
Target Start/End: Original strand, 40258874 - 40258931
Alignment:
Q  117 tatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||| |||||||||||| ||||||||||| ||||||||||||| |||||||||    
T  40258874 tatgaagcatggacactcctcggattaggcgtgtcctggtgtcggacaggtgtcgtgt 40258931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 174
Target Start/End: Original strand, 1486646 - 1486702
Alignment:
Q  118 atgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||| ||||||||||| ||||||||||| | |||||||||||||||||||||    
T  1486646 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgt 1486702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 174
Target Start/End: Original strand, 16297223 - 16297279
Alignment:
Q  118 atgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||  |||||||    
T  16297223 atgaagcacggacactcctcggattaggcgtgtcctggtgtcggacacacgtcgtgt 16297279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 22881629 - 22881689
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtc 234  Q
    ||||| |||||| |||||||||||||||||||||||| |||||||| || |||||||||||    
T  22881629 tgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtc 22881689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 180 - 243
Target Start/End: Original strand, 398784 - 398847
Alignment:
Q  180 tacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    |||||| |||||||||||||||||||||||| ||  |||| || ||||||||||||||||||||    
T  398784 tacactgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtg 398847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 180 - 243
Target Start/End: Complemental strand, 34298476 - 34298413
Alignment:
Q  180 tacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    |||||| |||||||||||||| ||||||||| ||| |||| ||||||||||| |||||||||||    
T  34298476 tacactgaattatgtgattttctcaaattattagtggtgtcggtgtgtcagtttccgtgtcgtg 34298413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 6427594 - 6427536
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||||||| ||  ||||||||||| | |||||||||||||||||||||    
T  6427594 ctatgaagcacggacactcatcagattaggcgtgtcccggtgtcggacacgtgtcgtgt 6427536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 30359428 - 30359374
Alignment:
Q  180 tacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtc 234  Q
    |||||| |||||||||||||||||||||||| |||||||  ||||||||||||||    
T  30359428 tacactaaattatgtgattttttcaaattatcagttgtgccggtgtgtcagtgtc 30359374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 37598950 - 37598892
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||||||||||| ||||||||||| |   |||||||||||||||||||    
T  37598950 ctatgaagcacggacactcctcggattaggcgtgtcccattgtcggacacgtgtcgtgt 37598892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 174 - 240
Target Start/End: Original strand, 46348396 - 46348462
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtc 240  Q
    ||||| |||||| |||||| ||||||||||||||||| || ||||| || |||||||||||||||||    
T  46348396 tgtaattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 46348462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 29144320 - 29144369
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacac 165  Q
    ||||||||||||||||||| ||| ||||||||||||| ||||||||||||    
T  29144320 ctatgaagcacggacactcttcggattaggcgtgttccggtgtcggacac 29144369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 235
Target Start/End: Original strand, 31672908 - 31672969
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtcc 235  Q
    ||||| |||||| ||||| |||||||||||||||||| || ||||| |||||||||||||||    
T  31672908 tgtaattacactgaattaagtgattttttcaaattattagctgtgtcggtgtgtcagtgtcc 31672969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 237
Target Start/End: Original strand, 1705005 - 1705068
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgt 237  Q
    ||||| ||| || |||||||||||||||||||||||| || ||||| |||||||| ||||||||    
T  1705005 tgtaattaccctgaattatgtgattttttcaaattattagatgtgtcggtgtgtcggtgtccgt 1705068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 165
Target Start/End: Original strand, 25452108 - 25452155
Alignment:
Q  118 atgaagcacggacactcctcgaattaggcgtgttctggtgtcggacac 165  Q
    |||||||||||||||| |||||||||||||||||| |||||| |||||    
T  25452108 atgaagcacggacactgctcgaattaggcgtgttccggtgtctgacac 25452155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 165
Target Start/End: Original strand, 42359391 - 42359438
Alignment:
Q  118 atgaagcacggacactcctcgaattaggcgtgttctggtgtcggacac 165  Q
    ||||||||||||||||||||| ||||||||||| | ||||||||||||    
T  42359391 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacac 42359438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 242
Target Start/End: Original strand, 1486728 - 1486790
Alignment:
Q  180 tacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgt 242  Q
    |||||| |||||||||||||||||||||||| || |||||  | |||||||| ||||||||||    
T  1486728 tacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtatccgtgtcgt 1486790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 2218347 - 2218297
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacg 166  Q
    ||||||||||||||||||||||  ||||||||||| || ||||||||||||    
T  2218347 ctatgaagcacggacactcctcagattaggcgtgtcctagtgtcggacacg 2218297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 5898206 - 5898264
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||| |||||||||||||||||| ||||| ||||| | ||||| |||||||||||||||    
T  5898206 ctataaagcacggacactcctcggattagacgtgtcccggtgttggacacgtgtcgtgt 5898264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 13011228 - 13011298
Alignment:
Q  174 tgtaactacacttaattatgtga-ttttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| ||||||||||||||||| |||||||||||||| || ||||| ||  ||||||||| |||||||||    
T  13011228 tgtaattacacttaattatgtgatttttttcaaattattagctgtgtcggcatgtcagtgttcgtgtcgtg 13011298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 16812581 - 16812523
Alignment:
Q  182 cacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtc 240  Q
    |||| |||||||||||||| ||||||||| | | |||| ||||||||||||||||||||    
T  16812581 cactgaattatgtgattttgtcaaattattattggtgtcggtgtgtcagtgtccgtgtc 16812523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 112 - 174
Target Start/End: Complemental strand, 18337452 - 18337390
Alignment:
Q  112 tgagctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||||||||||||||| || |||| ||| |  ||||||||||||||| ||||    
T  18337452 tgagctatgaagcacggacactcctcggatcaggcatgtcccagtgtcggacacgtgttgtgt 18337390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 174 - 240
Target Start/End: Original strand, 18556469 - 18556535
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtc 240  Q
    ||||| |||| | ||||||||||| |||||||||||| || ||||| || |||||||||||||||||    
T  18556469 tgtaattacattaaattatgtgatattttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 18556535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 22515827 - 22515885
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||||||||||| |||||||||||   ||||||||| | |||||||||    
T  22515827 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatatgtgtcgtgt 22515885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 117 - 155
Target Start/End: Complemental strand, 28663715 - 28663677
Alignment:
Q  117 tatgaagcacggacactcctcgaattaggcgtgttctgg 155  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  28663715 tatgaagcacagacactcctcgaattaggcgtgttctgg 28663677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 107 - 234
Target Start/End: Original strand, 35702533 - 35702661
Alignment:
Q  107 acttctgagctatgaagcacggacactcctcgaattaggcgtgttc--tggtgtcggacacgtgtcgtgtgtaactacacttaattatgtgattttttca 204  Q
    |||||| | ||||||||||||||||||||||| ||||||||||| |  | ||||| ||||| || |   ||||| ||||||||||||| |||  ||||||    
T  35702533 acttcttaactatgaagcacggacactcctcggattaggcgtgtcccatcgtgtccgacac-tgacacttgtaattacacttaattatttgaagttttca 35702631  T
Q  205 aattatgagttgtgttggtgtgtcagtgtc 234  Q
    |||||| || ||||| ||  ||||||||||    
T  35702632 aattattagctgtgtcggcatgtcagtgtc 35702661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 40917795 - 40917728
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||||||||  |||||||||||||||||| || ||||| || |||||||| |||||||||||    
T  40917795 tgtaattacacttaatt--gtgattttttcaaattattagctgtgtcggcgtgtcagtatccgtgtcgtg 40917728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 46348323 - 46348381
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||||| ||||| || ||||||||   |||||||||||||||||||||    
T  46348323 ctatgaagcacggacacacctcggatcaggcgtgtctcggtgtcggacacgtgtcgtgt 46348381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 47989627 - 47989569
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||||||||||| ||||||||||| | | |||| |||| |||||||||    
T  47989627 ctatgaagcacggacactcctcggattaggcgtgtcccgatgtcagacatgtgtcgtgt 47989569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 5927353 - 5927422
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||| | |||||| ||||||||||||||||| ||  ||||| | ||||||||||||||||||||    
T  5927353 tgtaattacattaaattatatgattttttcaaattattagcagtgttagcgtgtcagtgtccgtgtcgtg 5927422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 21378624 - 21378555
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||| |||||||| |||||||||| |||| || ||||| ||||||||  |||||||||||||    
T  21378624 tgtaattacactgaattatgtaattttttcaatttattagctgtgtcggtgtgtccatgtccgtgtcgtg 21378555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 24577199 - 24577244
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgt 219  Q
    ||||| |||||| |||||||||||||||||||||||| ||||||||    
T  24577199 tgtaattacactgaattatgtgattttttcaaattattagttgtgt 24577244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 31015089 - 31015020
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||| |||||||||||||| ||||||||| || ||||| || | ||||||| ||||||||||    
T  31015089 tgtaattacactgaattatgtgattttctcaaattattagctgtgtaggcgcgtcagtgcccgtgtcgtg 31015020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 235
Target Start/End: Original strand, 40285671 - 40285728
Alignment:
Q  178 actacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtcc 235  Q
    |||||||| ||||||| |||||| ||||||||| ||  ||||||||||||||||||||    
T  40285671 actacactgaattatgcgattttctcaaattattagcggtgttggtgtgtcagtgtcc 40285728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 239
Target Start/End: Original strand, 42359462 - 42359527
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgt 239  Q
    ||||| |||||| |||| ||||||||||||||||||| || |||||  | ||||||||||||||||    
T  42359462 tgtaattacactgaattttgtgattttttcaaattattagatgtgtcagcgtgtcagtgtccgtgt 42359527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 47989543 - 47989475
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||| |||||||||||||||| ||||||| | |||||| || ||||||||||| ||||||||    
T  47989543 tgtaattacactgaattatgtgatttttttaaattatta-ttgtgtcggcgtgtcagtgtctgtgtcgtg 47989475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 243
Target Start/End: Original strand, 48040412 - 48040544
Alignment:
Q  114 agctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacg--tgtcgtgtgtaactacacttaattatgtga-ttttttcaaattat 210  Q
    ||||| |||||||||||||||||| |||||||||||| |  ||||||||||||   | |   ||||  |||||| || |||||||  |||||||||||||    
T  48040412 agctacgaagcacggacactcctccaattaggcgtgtcccagtgtcggacacgaccgacacttgtatttacactaaaatatgtgacctttttcaaattat 48040511  T
Q  211 gagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
     |  ||||| || ||||||||||||||||||||    
T  48040512 tatctgtgtcggcgtgtcagtgtccgtgtcgtg 48040544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 148
Target Start/End: Original strand, 48547937 - 48547970
Alignment:
Q  115 gctatgaagcacggacactcctcgaattaggcgt 148  Q
    ||||||||||||||||||||||||||||||||||    
T  48547937 gctatgaagcacggacactcctcgaattaggcgt 48547970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 113345 - 113289
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcag 230  Q
    ||||| |||||| |||||||||||||||||||||||| || ||||| || |||||||    
T  113345 tgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcag 113289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 2896139 - 2896199
Alignment:
Q  179 ctacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgt 239  Q
    ||||||| |||||||||||||| ||||||||| ||  |||| || ||||||||||||||||    
T  2896139 ctacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgt 2896199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 243
Target Start/End: Complemental strand, 6427383 - 6427327
Alignment:
Q  187 aattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    |||||||||||||| ||||||||| ||  ||||||| ||||||||||||||| ||||    
T  6427383 aattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccgtgccgtg 6427327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 165
Target Start/End: Complemental strand, 10233374 - 10233326
Alignment:
Q  117 tatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacac 165  Q
    |||||||||||||||||||||  |||||| |||| ||||||||||||||    
T  10233374 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 10233326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 170
Target Start/End: Complemental strand, 15323289 - 15323233
Alignment:
Q  114 agctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtc 170  Q
    ||||||||| ||| ||||||||||| |||||| |||||  |||||||||||||||||    
T  15323289 agctatgaaacactgacactcctcggattaggtgtgtttcggtgtcggacacgtgtc 15323233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 238
Target Start/End: Original strand, 22515900 - 22515964
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtg 238  Q
    ||||| |||||| |||||||||||||||||||||||| || |||||  | ||||| |||||||||    
T  22515900 tgtaattacactaaattatgtgattttttcaaattattagctgtgtctgcgtgtccgtgtccgtg 22515964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 160
Target Start/End: Original strand, 31694639 - 31694683
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcg 160  Q
    ||||||||||||||||||||||  ||||||||||||| |||||||    
T  31694639 ctatgaagcacggacactcctcagattaggcgtgttccggtgtcg 31694683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 37598860 - 37598816
Alignment:
Q  192 tgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccg 236  Q
    ||||||||||||||||||| |||||||| || |||||||||||||    
T  37598860 tgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccg 37598816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 42004882 - 42004929
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggaca 164  Q
    ||||||||||||||||||| |||||||||||||||| | ||||||||||    
T  42004882 ctatgaagcacggacactcttcgaattaggcgtgtt-tagtgtcggaca 42004929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 237
Target Start/End: Complemental strand, 1815303 - 1815240
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgt 237  Q
    ||||| |||||| |||||||||||||||| |||| || | |||||| || ||||||||||||||    
T  1815303 tgtaattacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 1815240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 159
Target Start/End: Original strand, 7918154 - 7918197
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtc 159  Q
    ||||||||||||||||||||||| |||||| |||| ||||||||    
T  7918154 ctatgaagcacggacactcctcggattaggtgtgtcctggtgtc 7918197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 9033026 - 9033085
Alignment:
Q  180 tacacttaattatgtgatttt-ttcaaattatgagttgtgttggtgtgtcagtgtccgtg 238  Q
    |||||| |||||||||||||| |||||||||| ||| ||||||  |||||||||||||||    
T  9033026 tacactgaattatgtgatttttttcaaattattagtggtgttgacgtgtcagtgtccgtg 9033085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 171
Target Start/End: Original strand, 18556385 - 18556440
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcg 171  Q
    |||||||||||||||||| |||| ||||||||||| |  |||||||| ||||||||    
T  18556385 ctatgaagcacggacacttctcggattaggcgtgtcccagtgtcggatacgtgtcg 18556440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 159
Target Start/End: Complemental strand, 22947849 - 22947806
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtc 159  Q
    ||||||||||||||||||||||| ||||||||||| | ||||||    
T  22947849 ctatgaagcacggacactcctcggattaggcgtgtccaggtgtc 22947806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 236
Target Start/End: Original strand, 32434729 - 32434792
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggt-gtgtcagtgtccg 236  Q
    ||||| |||| | |||||||||| ||||||||||||| |||||||| ||| |||||||||||||    
T  32434729 tgtaattacaatgaattatgtgactttttcaaattattagttgtgtcggtggtgtcagtgtccg 32434792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 174
Target Start/End: Original strand, 32461392 - 32461451
Alignment:
Q  115 gctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||||||| || | ||||||||||| |  ||||| ||||||||||||||    
T  32461392 gctatgaagcacggacacttcttggattaggcgtgtcccagtgtcagacacgtgtcgtgt 32461451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 225
Target Start/End: Original strand, 40258946 - 40258997
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgt 225  Q
    ||||| |||||| |||||||||||||||||||||||| | |||||| |||||    
T  40258946 tgtaattacactgaattatgtgattttttcaaattattaattgtgtcggtgt 40258997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 1815376 - 1815318
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||| ||||| ||||||||  ||||||||||| | ||||||||||| |||||||||    
T  1815376 ctatgaatcacggtcactcctcagattaggcgtgtcccggtgtcggacatgtgtcgtgt 1815318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 5944413 - 5944355
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||| |||||||||| ||||||||| | | ||||||||||| |||| ||||    
T  5944413 ctatgaagcacgaacactcctcggattaggcgtatcccggtgtcggacatgtgttgtgt 5944355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 9449034 - 9449080
Alignment:
Q  187 aattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgt 233  Q
    |||||||||||||||||||||||| | | ||||||||||||| ||||    
T  9449034 aattatgtgattttttcaaattattaatggtgttggtgtgtctgtgt 9449080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 242
Target Start/End: Complemental strand, 17754351 - 17754289
Alignment:
Q  180 tacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgt 242  Q
    |||||| |||||||| ||||||||||||||| ||  |||| |||||||||| ||| |||||||    
T  17754351 tacactgaattatgtaattttttcaaattattagcggtgtcggtgtgtcagcgtctgtgtcgt 17754289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 150
Target Start/End: Original strand, 21365992 - 21366026
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgt 150  Q
    ||||||||||||||||||||||| |||||||||||    
T  21365992 ctatgaagcacggacactcctcggattaggcgtgt 21366026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 164
Target Start/End: Original strand, 22794016 - 22794066
Alignment:
Q  114 agctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggaca 164  Q
    |||||||||||||| ||||||||||||||||| |||| | || ||||||||    
T  22794016 agctatgaagcacgtacactcctcgaattaggtgtgtcccggagtcggaca 22794066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 34712323 - 34712377
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtc 170  Q
    ||||||||||||||||||||| ||||||| ||||| |  |||| |||||||||||    
T  34712323 ctatgaagcacggacactccttgaattagacgtgtcccagtgtaggacacgtgtc 34712377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 38078601 - 38078659
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||| | |||||||| ||||||||||| ||||||| | ||| |||||||||    
T  38078601 ctatgaagcacgaatactcctcggattaggcgtgtcctggtgttgaacatgtgtcgtgt 38078659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 240
Target Start/End: Original strand, 38078674 - 38078740
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtc 240  Q
    ||||| |||| | |||||||||||||||||||||||| || ||||| |  |||||||||| ||||||    
T  38078674 tgtaattacattgaattatgtgattttttcaaattattagctgtgtcgacgtgtcagtgttcgtgtc 38078740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 6612184 - 6612253
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||| |||||||| ||||||||||||||| |  ||| | || |||||| |||||||||||||    
T  6612184 tgtaattacactgaattatgtaattttttcaaattattaactgtatcggcgtgtcattgtccgtgtcgtg 6612253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 9103673 - 9103624
Alignment:
Q  187 aattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccg 236  Q
    |||||||||||||||||||||||| |  ||||| || |||||||||||||    
T  9103673 aattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccg 9103624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 150
Target Start/End: Original strand, 10572535 - 10572568
Alignment:
Q  117 tatgaagcacggacactcctcgaattaggcgtgt 150  Q
    |||||||||||||||||||| |||||||||||||    
T  10572535 tatgaagcacggacactccttgaattaggcgtgt 10572568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 14359535 - 14359603
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||| |||||||||||||| ||||||||| || ||||| || ||||| ||||| ||||||||    
T  14359535 tgtaattacactaaattatgtgatttt-tcaaattattagctgtgtcggcgtgtccgtgtctgtgtcgtg 14359603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 169
Target Start/End: Original strand, 16164244 - 16164297
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgt 169  Q
    ||||||| |||  |||||| ||| ||||||||||| ||||||||||||||||||    
T  16164244 ctatgaaacacatacactcttcggattaggcgtgtcctggtgtcggacacgtgt 16164297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 171
Target Start/End: Complemental strand, 17778670 - 17778617
Alignment:
Q  118 atgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcg 171  Q
    |||||||||| ||||| |||| ||||||| ||| | ||||||||||||||||||    
T  17778670 atgaagcacgaacacttctcggattaggcatgtcccggtgtcggacacgtgtcg 17778617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 159
Target Start/End: Original strand, 27965938 - 27965983
Alignment:
Q  114 agctatgaagcacggacactcctcgaattaggcgtgttctggtgtc 159  Q
    |||||||||||| |||||||||||| ||||||||||| | ||||||    
T  27965938 agctatgaagcatggacactcctcggattaggcgtgtcccggtgtc 27965983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 165
Target Start/End: Complemental strand, 52903365 - 52903316
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacac 165  Q
    ||||||||||||||||||| |||||| || ||||| | ||||||||||||    
T  52903365 ctatgaagcacggacactcttcgaataagccgtgtcccggtgtcggacac 52903316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 243
Target Start/End: Complemental strand, 1262917 - 1262861
Alignment:
Q  187 aattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    |||||||||||||| ||||||||| || ||||| || ||||| |||| |||||||||    
T  1262917 aattatgtgattttctcaaattattagctgtgtcggcgtgtccgtgttcgtgtcgtg 1262861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 243
Target Start/End: Complemental strand, 9709853 - 9709797
Alignment:
Q  187 aattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    |||||||||||||| ||||||||| ||  |||| ||  |||||||||||||||||||    
T  9709853 aattatgtgattttctcaaattattagcggtgtaggcatgtcagtgtccgtgtcgtg 9709797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 10233293 - 10233245
Alignment:
Q  180 tacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtc 228  Q
    |||||| |||||||||||||| |||| |||| ||| |||||||||||||    
T  10233293 tacactgaattatgtgattttctcaatttattagtggtgttggtgtgtc 10233245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 243
Target Start/End: Original strand, 10572615 - 10572671
Alignment:
Q  187 aattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    |||||||||||||| ||||||||| ||| |||| || |||||||||| | |||||||    
T  10572615 aattatgtgattttctcaaattattagtggtgtcggcgtgtcagtgttcatgtcgtg 10572671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 158
Target Start/End: Original strand, 13011172 - 13011208
Alignment:
Q  122 agcacggacactcctcgaattaggcgtgttctggtgt 158  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  13011172 agcacggacactcctcggattaggtgtgttctggtgt 13011208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 18337375 - 18337339
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattat 210  Q
    ||||| |||||| ||||||||||||||||||||||||    
T  18337375 tgtaattacactgaattatgtgattttttcaaattat 18337339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 160
Target Start/End: Original strand, 22881567 - 22881611
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcg 160  Q
    ||||||||||||||||||||||| ||||| ||||| | |||||||    
T  22881567 ctatgaagcacggacactcctcggattagacgtgtcccggtgtcg 22881611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 32461476 - 32461520
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtg 218  Q
    ||||| |||| | |||||||||||||||||||||||| |||||||    
T  32461476 tgtaattacattaaattatgtgattttttcaaattattagttgtg 32461520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 150
Target Start/End: Complemental strand, 36878587 - 36878551
Alignment:
Q  114 agctatgaagcacggacactcctcgaattaggcgtgt 150  Q
    ||||||||||||||||||||||| | |||||||||||    
T  36878587 agctatgaagcacggacactcctgggattaggcgtgt 36878551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 36906030 - 36905982
Alignment:
Q  187 aattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtcc 235  Q
    |||||||||||||| ||| ||||| ||  ||||||||||||||||||||    
T  36906030 aattatgtgattttctcagattattagcggtgttggtgtgtcagtgtcc 36905982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 1e-19; HSPs: 60)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 10770687 - 10770756
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||| |||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||    
T  10770687 tgtaattacactgaattatgtgattttttcaaattattagttgtgttggcgtgtcagtgtccatgtcgtg 10770756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 34595253 - 34595111
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt---------------gtaactacacttaattatgtgatttt 200  Q
    ||||||||||||||||||||||| |||||| |||| | |||||| ||||||||||||||               |||| |||||| ||||||||||||||    
T  34595253 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcagacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 34595154  T
Q  201 ttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    |||||||||| |||||||| || |||||| |||||||||||||    
T  34595153 ttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtg 34595111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 7938221 - 7938093
Alignment:
Q  114 agctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgtgtaactacacttaattatgtgattttttcaaattatgag 213  Q
    ||||||||||||||||||||||||| || ||||||||   ||||||||||||  | |   | ||| |||||| |||||| ||||||||||||||||| ||    
T  7938221 agctatgaagcacggacactcctcggatcaggcgtgtctcggtgtcggacacc-gacacttataattacactaaattatatgattttttcaaattattag 7938123  T
Q  214 ttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
     ||||| || |||||||||||| |||||||    
T  7938122 ctgtgtcggcgtgtcagtgtccatgtcgtg 7938093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 8776986 - 8777055
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||| |||| ||||||||||||||||||| |||||||| || ||||||||||||||||||||    
T  8776986 tgtaattacactgaattttgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtg 8777055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 174 - 240
Target Start/End: Original strand, 17841602 - 17841668
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtc 240  Q
    ||||| |||||| |||||||||||||||||||||||| || ||||| || |||||||||||||||||    
T  17841602 tgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 17841668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 117 - 240
Target Start/End: Complemental strand, 31959268 - 31959139
Alignment:
Q  117 tatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcg------tgtgtaactacacttaattatgtgattttttcaaattat 210  Q
    |||||||||||||||||||||| |||||| |||| | |||||||||||| |||||        ||||| ||||||  |||||||||||||||||||||||    
T  31959268 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacatgtcgccgacacttgtaattacactgcattatgtgattttttcaaattat 31959169  T
Q  211 gagttgtgttggtgtgtcagtgtccgtgtc 240  Q
     || ||||  || |||||||||| ||||||    
T  31959168 tagctgtgacggcgtgtcagtgttcgtgtc 31959139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 426527 - 426596
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||| |||||||||||||||||||||||||| |  ||||| || ||||||||||||||||||||    
T  426527 tgtaattacatttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtg 426596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 243
Target Start/End: Original strand, 853880 - 853941
Alignment:
Q  182 cacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||||||||||||||||||||||||||| |||||||| || |||||||  |||||||||||    
T  853880 cacttaattatgtgattttttcaaattattagttgtgtcggcgtgtcagcatccgtgtcgtg 853941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 8365532 - 8365601
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||  ||||||||||| |||||||||||| |||||||| || ||||||||||||||||||||    
T  8365532 tgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtg 8365601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 12696370 - 12696301
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||| |||||||| ||||||||||||||| || ||||| || ||||||||||||||||||||    
T  12696370 tgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtg 12696301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 16766743 - 16766674
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||| |||||||||||||||||||||||| || ||||| || |||||||||||| |||||||    
T  16766743 tgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtg 16766674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 16833354 - 16833285
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||| || ||||||||||||||||||||| |||||||| || ||||||||||| ||||||||    
T  16833354 tgtaattacactgaagtatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtg 16833285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 117 - 179
Target Start/End: Complemental strand, 9658998 - 9658935
Alignment:
Q  117 tatgaagcacggacactcctcg-aattaggcgtgttctggtgtcggacacgtgtcgtgtgtaac 179  Q
    |||||||||||||||||||| | |||||||||||||| |||||| |||||||||||||| ||||    
T  9658998 tatgaagcacggacactccttggaattaggcgtgttccggtgtcagacacgtgtcgtgtctaac 9658935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 4878061 - 4878004
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||||||||||| ||||||||||| || |||||||||| |||||||||    
T  4878061 ctatgaagcacggacactcctcggattaggcgtgtcct-gtgtcggacatgtgtcgtgt 4878004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 8365448 - 8365506
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||||| |||||||| ||||||||||| |  ||||||||||||||||||||    
T  8365448 ctatgaagcacggagactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgt 8365506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 8776908 - 8776966
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||||||||||| |||||| ||||   |||||||||||||||||||||    
T  8776908 ctatgaagcacggacactcctcggattaggtgtgtctcggtgtcggacacgtgtcgtgt 8776966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 17327590 - 17327648
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||||||||||| ||||||||||| |  ||||| ||||||||||||||    
T  17327590 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcagacacgtgtcgtgt 17327648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 28152217 - 28152159
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||| |||||||||| ||||||| ||| | |||||||||||||||||||||    
T  28152217 ctatgaagcacgaacactcctcggattaggcctgtcccggtgtcggacacgtgtcgtgt 28152159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 28715414 - 28715356
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||| ||||| |||||||||||||||| | ||||||| |||||||||||||    
T  28715414 ctatgaagcacgtacacttctcgaattaggcgtgtcccggtgtcgaacacgtgtcgtgt 28715356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 168
Target Start/End: Complemental strand, 7930413 - 7930368
Alignment:
Q  123 gcacggacactcctcgaattaggcgtgttctggtgtcggacacgtg 168  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||    
T  7930413 gcacgaacactcctcgaattaggcgtgtcctggtgtcggacacgtg 7930368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 9107383 - 9107452
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||| |||| ||||||||||||||||||| || ||||| || |||| |||||||||||||||    
T  9107383 tgtaattacactgaattttgtgattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtcgtg 9107452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 174
Target Start/End: Complemental strand, 31385048 - 31384991
Alignment:
Q  117 tatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||||||||||| | ||||||||||| | ||||| |||||||||||||||    
T  31385048 tatgaagcacggacactccttggattaggcgtgtcccggtgtaggacacgtgtcgtgt 31384991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 174
Target Start/End: Complemental strand, 16766828 - 16766769
Alignment:
Q  115 gctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||||| || ||| ||||||||||| | |||||||||||||||| ||||    
T  16766828 gctatgaagcacggacattcttcggattaggcgtgtcccggtgtcggacacgtgttgtgt 16766769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 3209518 - 3209460
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||  |||||||||| ||||||||||| | |||||||||| ||||||||||    
T  3209518 ctatgaagcacaaacactcctcggattaggcgtgtccgggtgtcggacgcgtgtcgtgt 3209460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 10339054 - 10339112
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||||||||||  ||||||||||| |  |||||||||| |||||||||    
T  10339054 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacatgtgtcgtgt 10339112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 24645600 - 24645542
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||| ||||||| ||| ||||| |||||  ||||||||||||||||||||||    
T  24645600 ctatgaagcacagacactcttcggattagacgtgtcttggtgtcggacacgtgtcgtgt 24645542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 1681804 - 1681735
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||| ||||| |||||||||||||||||| |||||||| || |||| |||||  ||||||||    
T  1681804 tgtaattacactgaattacgtgattttttcaaattattagttgtgtcggcgtgttagtgtatgtgtcgtg 1681735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 4877980 - 4877919
Alignment:
Q  183 acttaattatgtga-ttttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    |||||||||||||| |||||||||||||| || ||||| ||||||||| | |||||||||||    
T  4877980 acttaattatgtgacttttttcaaattattagctgtgtcggtgtgtcactatccgtgtcgtg 4877919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 151
Target Start/End: Original strand, 7723197 - 7723234
Alignment:
Q  114 agctatgaagcacggacactcctcgaattaggcgtgtt 151  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  7723197 agctatgaagcacggacactcctcggattaggcgtgtt 7723234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 7977843 - 7977912
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||| |||||||| ||||||||||||||| || ||||| || |||||||| ||| |||||||    
T  7977843 tgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtatccatgtcgtg 7977912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 174
Target Start/End: Original strand, 17841530 - 17841587
Alignment:
Q  117 tatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||||||||||||| |||||||||||    ||||||||||| ||||||||    
T  17841530 tatgaagcacggacactcctcggattaggcgtgtctcagtgtcggacacatgtcgtgt 17841587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 165
Target Start/End: Complemental strand, 1700454 - 1700406
Alignment:
Q  117 tatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacac 165  Q
    |||||| ||||||||||||| ||||||||||| |||||||||| |||||    
T  1700454 tatgaaacacggacactccttgaattaggcgtattctggtgtccgacac 1700406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 7265612 - 7265668
Alignment:
Q  180 tacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccg 236  Q
    |||||| |||||||||||||| ||||||||| ||  ||||||| |||||||||||||    
T  7265612 tacactgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccg 7265668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 165
Target Start/End: Complemental strand, 26553864 - 26553816
Alignment:
Q  117 tatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacac 165  Q
    ||||||||||  |||||||||||||||||||||||||| |||| |||||    
T  26553864 tatgaagcacatacactcctcgaattaggcgtgttctgatgtcagacac 26553816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 243
Target Start/End: Complemental strand, 3398658 - 3398596
Alignment:
Q  180 tacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    |||||| |||||| |||||||| |||||||| || ||||| || ||||||||||||||||||||    
T  3398658 tacactgaattatatgattttt-caaattattagctgtgtcggcgtgtcagtgtccgtgtcgtg 3398596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 233
Target Start/End: Original strand, 7801169 - 7801228
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgt 233  Q
    ||||| ||| || |||||||||||||||||||||||| |||||||| || |||| |||||    
T  7801169 tgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggcgtgttagtgt 7801228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 237
Target Start/End: Complemental strand, 7930343 - 7930288
Alignment:
Q  182 cacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgt 237  Q
    |||| |||||||||||||||||||||||| | |||||| ||  |||||||||||||    
T  7930343 cactaaattatgtgattttttcaaattattaattgtgtcggcatgtcagtgtccgt 7930288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 9025448 - 9025495
Alignment:
Q  119 tgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacg 166  Q
    ||||||||||||||| |||| ||||||||||| | |||||||||||||    
T  9025448 tgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacg 9025495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 243
Target Start/End: Complemental strand, 9658919 - 9658856
Alignment:
Q  180 tacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    |||||| |||||||||||||| | ||||||| ||  |||| || ||||||||||||||||||||    
T  9658919 tacactgaattatgtgattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtg 9658856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 31384966 - 31384923
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgt 217  Q
    ||||| |||||| |||||||||||||||||||||||| ||||||    
T  31384966 tgtaattacactgaattatgtgattttttcaaattattagttgt 31384923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 243
Target Start/End: Original strand, 31579244 - 31579307
Alignment:
Q  180 tacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    |||||| |||||||||||||| ||||||||| |   ||||||||||| |||||||| |||||||    
T  31579244 tacactgaattatgtgattttctcaaattattaacggtgttggtgtggcagtgtccatgtcgtg 31579307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 174
Target Start/End: Original strand, 32978842 - 32978897
Alignment:
Q  119 tgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||||||||| | ||||| ||||| | ||||||||||| |||||||||    
T  32978842 tgaagcacggacactccttggattagacgtgtcccggtgtcggacatgtgtcgtgt 32978897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 210
Target Start/End: Complemental strand, 7151452 - 7151422
Alignment:
Q  180 tacacttaattatgtgattttttcaaattat 210  Q
    |||||||||||||||||||||||||||||||    
T  7151452 tacacttaattatgtgattttttcaaattat 7151422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 7248488 - 7248430
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||||||||||| ||| | ||||| | |||||||||||| ||| ||||    
T  7248488 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcggacacatgttgtgt 7248430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 7625235 - 7625185
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacg 166  Q
    |||||||||||| |||||||| | |||| |||||||| |||||||||||||    
T  7625235 ctatgaagcacgaacactccttggattaagcgtgttccggtgtcggacacg 7625185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 165
Target Start/End: Original strand, 8389411 - 8389457
Alignment:
Q  119 tgaagcacggacactcctcgaattaggcgtgttctggtgtcggacac 165  Q
    |||||||||||||||||||| |||||| |||| | ||||||||||||    
T  8389411 tgaagcacggacactcctcggattaggtgtgtcccggtgtcggacac 8389457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 16833427 - 16833369
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||| || ||||||||||| ||| || |||| |||||||||||| ||||||||||    
T  16833427 ctatgaagtacagacactcctcggattcggtgtgtcctggtgtcggacgcgtgtcgtgt 16833369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 240
Target Start/End: Complemental strand, 28152144 - 28152079
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtc 240  Q
    ||||| |||||| ||||||||||||||| |||||||| || | ||| || |||||||||||||||||    
T  28152144 tgtaattacactgaattatgtgattttt-caaattattagctttgtcggcgtgtcagtgtccgtgtc 28152079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 34073278 - 34073335
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||||||||||||||||||||  |||| | |||||||| ||| ||||||||    
T  34073278 ctatgaagcacggacactcctcgaattagaggtgtcccggtgtcgg-cacatgtcgtgt 34073335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 159
Target Start/End: Complemental strand, 5569866 - 5569825
Alignment:
Q  118 atgaagcacggacactcctcgaattaggcgtgttctggtgtc 159  Q
    ||||||||||||||||||||  ||||||||||||| ||||||    
T  5569866 atgaagcacggacactcctcagattaggcgtgttcaggtgtc 5569825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 150
Target Start/End: Original strand, 5732471 - 5732508
Alignment:
Q  113 gagctatgaagcacggacactcctcgaattaggcgtgt 150  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  5732471 gagctatgaagcatggacactcctcggattaggcgtgt 5732508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 9107299 - 9107348
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacac 165  Q
    ||||||||||||| ||||||||| |||||| |||| | ||||||||||||    
T  9107299 ctatgaagcacgggcactcctcggattaggtgtgtcccggtgtcggacac 9107348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 181 - 242
Target Start/End: Complemental strand, 19044503 - 19044442
Alignment:
Q  181 acacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgt 242  Q
    ||||| ||||||||||| || ||||||||| ||| |||| || |||||||||||| ||||||    
T  19044503 acactgaattatgtgatattctcaaattattagtcgtgtcggcgtgtcagtgtccatgtcgt 19044442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 174
Target Start/End: Original strand, 25038029 - 25038058
Alignment:
Q  145 gcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||||||||||||||||||    
T  25038029 gcgtgttctggtgtcggacacgtgtcgtgt 25038058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 240
Target Start/End: Original strand, 30866170 - 30866223
Alignment:
Q  187 aattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtc 240  Q
    |||||||||||||| ||||||||| ||  ||||||||||||| ||||| |||||    
T  30866170 aattatgtgattttctcaaattattagcggtgttggtgtgtcggtgtcagtgtc 30866223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 4118346 - 4118382
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattat 210  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  4118346 tgtaattacatttaattatgtgattttttcaaattat 4118382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 174
Target Start/End: Original strand, 5000557 - 5000613
Alignment:
Q  118 atgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||| |||||| ||| ||||| ||||| ||||||||||| | |||||||||    
T  5000557 atgaagcacgaacactcttcggattagacgtgtcctggtgtcggatatgtgtcgtgt 5000613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 5970121 - 5970157
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattat 210  Q
    ||||| |||||| ||||||||||||||||||||||||    
T  5970121 tgtaattacactgaattatgtgattttttcaaattat 5970157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 243
Target Start/End: Complemental strand, 9027211 - 9027155
Alignment:
Q  187 aattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    |||||||||||| | ||||||||| ||  |||| || ||||||||||||||||||||    
T  9027211 aattatgtgattatctcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtg 9027155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 237
Target Start/End: Original strand, 19147431 - 19147479
Alignment:
Q  189 ttatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgt 237  Q
    |||||||||||| ||||||||| || |||||  ||||||||||||||||    
T  19147431 ttatgtgattttctcaaattattagctgtgtccgtgtgtcagtgtccgt 19147479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 4e-19; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 23292926 - 23293068
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtg---------------tgtaactacacttaattatgtgatttt 200  Q
    ||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||               ||||| || ||| ||||||||||||||    
T  23292926 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattatactgaattatgtgatttt 23293025  T
Q  201 ttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    |||||||||| || ||||| || |||||| |||||||||||||    
T  23293026 ttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtg 23293068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 209
Target Start/End: Original strand, 3064868 - 3064961
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgtgtaactacacttaattatgtgattttttcaaatta 209  Q
    ||||||||||||||||||||||| |||||||||||    | |||||||| ||||||||| ||| |||||| |||| ||||||||| ||||||||    
T  3064868 ctatgaagcacggacactcctcggattaggcgtgtctcagagtcggacatgtgtcgtgtataattacactgaattgtgtgattttctcaaatta 3064961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 117 - 174
Target Start/End: Original strand, 3947702 - 3947759
Alignment:
Q  117 tatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||    
T  3947702 tatgaagcacggacactcctcggattaggtgtgtcctggtgtcggacacgtgtcgtgt 3947759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 118 - 243
Target Start/End: Original strand, 22440559 - 22440682
Alignment:
Q  118 atgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgtgtaactacacttaattatgtgattttttcaaattatgagttgt 217  Q
    ||||||||||||||||||||| ||||||||||| || |||||||||||  |||   | ||| |||||| |||||||||||||| ||||||||| |   ||    
T  22440559 atgaagcacggacactcctcggattaggcgtgtcctagtgtcggacac--gtcacatataattacactgaattatgtgattttctcaaattattaacggt 22440656  T
Q  218 gttggtgtgtcagtgtccgtgtcgtg 243  Q
    || | ||| ||||||||| |||||||    
T  22440657 gtcgatgtatcagtgtccatgtcgtg 22440682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 180 - 243
Target Start/End: Complemental strand, 36635364 - 36635301
Alignment:
Q  180 tacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    |||||| |||||||||||||| ||||||||| ||| ||||||| ||||||||||||| ||||||    
T  36635364 tacactgaattatgtgattttctcaaattattagtggtgttggcgtgtcagtgtccgagtcgtg 36635301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 715545 - 715603
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||||||||||| ||||||||||| |  |||||||||| |||||||||    
T  715545 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt 715603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 752871 - 752929
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||||||||||| ||||||||||| |  |||||||||| |||||||||    
T  752871 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt 752929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 24613630 - 24613688
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||||||||| | ||||| ||||| |||||||| ||||||||||||||    
T  24613630 ctatgaagcacggacactcctaggattagacgtgtcctggtgtcagacacgtgtcgtgt 24613688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 35161155 - 35161097
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||||||  ||| |||||| |||||| |||||||||||||||||||||    
T  35161155 ctatgaagcacggacacttttcggattaggtgtgttccggtgtcggacacgtgtcgtgt 35161097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 42640643 - 42640589
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtc 170  Q
    |||||||||||||| |||||||| ||||||||||| |||||| ||||||||||||    
T  42640643 ctatgaagcacggaaactcctcggattaggcgtgtcctggtgccggacacgtgtc 42640589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 18513175 - 18513224
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacac 165  Q
    ||||||||||||||||||||||  ||||||||||| ||||||||||||||    
T  18513175 ctatgaagcacggacactcctcagattaggcgtgtcctggtgtcggacac 18513224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 19482714 - 19482645
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||  ||||||||||| |||||||||||| |||||||| || ||||||||||| ||||||||    
T  19482714 tgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtg 19482645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 174
Target Start/End: Original strand, 30982808 - 30982865
Alignment:
Q  117 tatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||||||||| | | ||||||||||| | |||||||||||||||||||||    
T  30982808 tatgaagcacggacactctttggattaggcgtgtcccggtgtcggacacgtgtcgtgt 30982865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 170
Target Start/End: Complemental strand, 28084640 - 28084589
Alignment:
Q  119 tgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtc 170  Q
    |||||||||||||||||||| ||||||||||| |  ||||||||||||||||    
T  28084640 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtc 28084589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 35158004 - 35158063
Alignment:
Q  180 tacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgt 239  Q
    |||||| ||||||||||||||| |||||||| ||||| || || ||||||||||||||||    
T  35158004 tacactaaattatgtgatttttccaaattattagttgcgtcggcgtgtcagtgtccgtgt 35158063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 2625959 - 2626009
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacg 166  Q
    |||||||||||||| |||||| ||||||||||||| ||| |||||||||||    
T  2625959 ctatgaagcacggatactccttgaattaggcgtgtcctgatgtcggacacg 2626009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 174 - 240
Target Start/End: Original strand, 14465088 - 14465154
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtc 240  Q
    ||||| |||| | |||||||||||||||||||||||| || |||||| | ||||||||||| |||||    
T  14465088 tgtaattacattgaattatgtgattttttcaaattattaggtgtgttagagtgtcagtgtctgtgtc 14465154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 19482798 - 19482740
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||| |||||||||| |||||| |||| |  ||||||||||||||||||||    
T  19482798 ctatgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacacgtgtcgtgt 19482740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 22234819 - 22234877
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||| ||||| |||| |||||  |||| |||||||||||||||||||||||    
T  22234819 ctatgaagcacgaacacttctcggattagctgtgtcctggtgtcggacacgtgtcgtgt 22234877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 29205587 - 29205529
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||| |||||||||| ||||||||||| |  |||||||||| |||||||||    
T  29205587 ctatgaagcacgaacactcctcggattaggcgtgtcccagtgtcggacatgtgtcgtgt 29205529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 171
Target Start/End: Complemental strand, 30838335 - 30838285
Alignment:
Q  121 aagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcg 171  Q
    ||||||||||||||||||  ||||||||||  |||||||||||||||||||    
T  30838335 aagcacggacactcctcgggttaggcgtgtcttggtgtcggacacgtgtcg 30838285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 35157925 - 35157983
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||||||||| |||| |||| |||||||| ||||| ||||| |||||||||    
T  35157925 ctatgaagcacggacacttctcggattaagcgtgttccggtgttggacatgtgtcgtgt 35157983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 36635449 - 36635391
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||||||| ||| ||||||||||| | |||||| ||| ||||||||||    
T  36635449 ctatgaagcacggacactcttcggattaggcgtgtcccggtgtctgacgcgtgtcgtgt 36635391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 27706190 - 27706259
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||| |||||||||||||||| ||||||| | |||||| |  |||||||||||| |||||||    
T  27706190 tgtaattacactaaattatgtgatttttttaaattattaattgtgtcgacgtgtcagtgtccctgtcgtg 27706259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 40481682 - 40481614
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||| ||||||||||||||| |||||||| |||||| | || ||||||||||| ||||||||    
T  40481682 tgtaattacactgaattatgtgattttt-caaattattagttgtatcggcgtgtcagtgtcagtgtcgtg 40481614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 11596365 - 11596425
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtc 234  Q
    ||||| |||||| |||||||||||||||||||||||| || | |||||| || ||||||||    
T  11596365 tgtaattacactgaattatgtgattttttcaaattattagctttgttggcgtatcagtgtc 11596425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 242
Target Start/End: Original strand, 12797351 - 12797418
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgt 242  Q
    ||||| |||||| |||||||||||||| ||||||||| |||| ||  || |||||||||||||||||||    
T  12797351 tgtaattacactgaattatgtgatttt-tcaaattattagttttgccggcgtgtcagtgtccgtgtcgt 12797418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 243
Target Start/End: Original strand, 2361994 - 2362057
Alignment:
Q  180 tacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    |||||| |||||||| ||||||||||||||| || ||||| ||||||||| ||||  |||||||    
T  2361994 tacactaaattatgtaattttttcaaattattagctgtgtcggtgtgtcaatgtcaatgtcgtg 2362057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 174
Target Start/End: Original strand, 12895213 - 12895272
Alignment:
Q  115 gctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||| |||||||||| ||||||||||| | | ||||||| || ||||||||    
T  12895213 gctatgaagcacgaacactcctcggattaggcgtgtcccgatgtcggatacatgtcgtgt 12895272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 242
Target Start/End: Original strand, 12895300 - 12895355
Alignment:
Q  187 aattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgt 242  Q
    |||||||||||||||||||||||| | |||||| || |||||| ||| ||||||||    
T  12895300 aattatgtgattttttcaaattattatttgtgtcggcgtgtcattgttcgtgtcgt 12895355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 20743210 - 20743261
Alignment:
Q  120 gaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcg 171  Q
    ||||||||||||||| ||| |||||  |||||| ||||||||||||||||||    
T  20743210 gaagcacggacactcatcggattagatgtgttccggtgtcggacacgtgtcg 20743261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 171
Target Start/End: Complemental strand, 24343632 - 24343577
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcg 171  Q
    ||||||||||||||||||||||  | ||||||||| | ||||||||||||| ||||    
T  24343632 ctatgaagcacggacactcctcagaataggcgtgtcccggtgtcggacacgcgtcg 24343577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 29205490 - 29205439
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgt 225  Q
    ||||| |||||| |||||||||||||||||||||||| ||  ||||||||||    
T  29205490 tgtaattacactgaattatgtgattttttcaaattattagccgtgttggtgt 29205439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 240
Target Start/End: Complemental strand, 30298993 - 30298926
Alignment:
Q  174 tgtaactacacttaattatgtgatttttt-caaattatgagttgtgttggtgtgtcagtgtccgtgtc 240  Q
    ||||| |||||| |||||||| ||||||| |||||||| || ||||| || |||||||||||||||||    
T  30298993 tgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 30298926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 240
Target Start/End: Complemental strand, 30327861 - 30327794
Alignment:
Q  174 tgtaactacacttaattatgtgatttttt-caaattatgagttgtgttggtgtgtcagtgtccgtgtc 240  Q
    ||||| |||||| |||||||| ||||||| |||||||| || ||||| || |||||||||||||||||    
T  30327861 tgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 30327794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 54580042 - 54580081
Alignment:
Q  180 tacacttaattatgtgattttttcaaattatgagttgtgt 219  Q
    |||||| |||||||||||||||||||||||| ||||||||    
T  54580042 tacactgaattatgtgattttttcaaattattagttgtgt 54580081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 166
Target Start/End: Complemental strand, 941368 - 941314
Alignment:
Q  112 tgagctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacg 166  Q
    |||||||||||||||||||| || ||| |||||| |||| ||| |||||||||||    
T  941368 tgagctatgaagcacggacagtcttcggattaggtgtgtcctgatgtcggacacg 941314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 150
Target Start/End: Original strand, 5775304 - 5775338
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgt 150  Q
    ||||||||||||||||||||||| |||||||||||    
T  5775304 ctatgaagcacggacactcctcggattaggcgtgt 5775338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 152
Target Start/End: Complemental strand, 12708263 - 12708225
Alignment:
Q  114 agctatgaagcacggacactcctcgaattaggcgtgttc 152  Q
    ||||||||||||||||| ||||||| |||||||||||||    
T  12708263 agctatgaagcacggacgctcctcggattaggcgtgttc 12708225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 161
Target Start/End: Original strand, 12895054 - 12895100
Alignment:
Q  115 gctatgaagcacggacactcctcgaattaggcgtgttctggtgtcgg 161  Q
    |||||||||||||||||||| ||||||||||||| | | ||||||||    
T  12895054 gctatgaagcacggacactcttcgaattaggcgtatcccggtgtcgg 12895100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 15724483 - 15724541
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||  | |||||||| |||||||||||| ||||||| ||||||||| ||||    
T  15724483 ctatgaagcacataaactcctcggattaggcgtgttttggtgtctgacacgtgttgtgt 15724541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 16073513 - 16073455
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||| |||||||||||| |||||||||||  | |||||||||| || ||||||    
T  16073513 ctatgaagcatggacactcctcggattaggcgtgtcttagtgtcggacatgtatcgtgt 16073455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 240
Target Start/End: Complemental strand, 21945549 - 21945483
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtc 240  Q
    ||||| |||||| |||||||| ||||||||||||||| || ||||| ||  |||||||||| |||||    
T  21945549 tgtaattacactgaattatgtcattttttcaaattattagctgtgtcggcatgtcagtgtctgtgtc 21945483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 28964188 - 28964246
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||| |||||||||||| ||||||||||| |  |||||||| | |||||||||    
T  28964188 ctatgaagcatggacactcctcggattaggcgtgtcccagtgtcggatatgtgtcgtgt 28964246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 32273552 - 32273594
Alignment:
Q  187 aattatgtgattttttcaaattatgagttgtgttggtgtgtca 229  Q
    |||||||| ||||||||||||||| ||||||||||| ||||||    
T  32273552 aattatgttattttttcaaattattagttgtgttggcgtgtca 32273594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 34306744 - 34306802
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||| ||| |||||  |||||||||||   |||||||||||||||||||||    
T  34306744 ctatgaagcacgaacattcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgt 34306802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 49431145 - 49431087
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||| ||||| |||||||||||| || |||||||| | ||||| |||||||||||||||    
T  49431145 ctataaagcatggacactcctcggataaggcgtgtcccggtgttggacacgtgtcgtgt 49431087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 162
Target Start/End: Original strand, 53381530 - 53381576
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcgga 162  Q
    ||||||||||||||||||||||| |||||| |||| | |||||||||    
T  53381530 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcgga 53381576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 174
Target Start/End: Complemental strand, 4157266 - 4157210
Alignment:
Q  118 atgaagcacggacactcctcgaattaggcgtgttct-ggtgtcggacacgtgtcgtgt 174  Q
    ||||||||| |||||||||||||||||| || |||| ||||||||||| |||||||||    
T  4157266 atgaagcacagacactcctcgaattaggtgt-ttctcggtgtcggacatgtgtcgtgt 4157210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 174
Target Start/End: Complemental strand, 4157553 - 4157497
Alignment:
Q  118 atgaagcacggacactcctcgaattaggcgtgttct-ggtgtcggacacgtgtcgtgt 174  Q
    ||||||||  ||||||||||||||||||||| |||| ||||||||||| |||||||||    
T  4157553 atgaagcatagacactcctcgaattaggcgt-ttctcggtgtcggacatgtgtcgtgt 4157497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 150
Target Start/End: Complemental strand, 4383484 - 4383451
Alignment:
Q  117 tatgaagcacggacactcctcgaattaggcgtgt 150  Q
    |||||||||||||||||||||| |||||||||||    
T  4383484 tatgaagcacggacactcctcggattaggcgtgt 4383451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 243
Target Start/End: Original strand, 11651155 - 11651216
Alignment:
Q  182 cacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    |||| |||||||||||||||| ||||||| || ||||| |  |||||||||||||| |||||    
T  11651155 cactgaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtgtccgtatcgtg 11651216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 174
Target Start/End: Original strand, 14465006 - 14465063
Alignment:
Q  117 tatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||||||||||||  ||||| ||||| |  |||||| |||||||||||||    
T  14465006 tatgaagcacggacactcctcagattagacgtgtcccagtgtcgaacacgtgtcgtgt 14465063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 50280920 - 50280867
Alignment:
Q  181 acacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtc 234  Q
    |||||||||||||||| ||||||||||||| || ||||| || ||||| |||||    
T  50280920 acacttaattatgtgaatttttcaaattattagctgtgtcggcgtgtccgtgtc 50280867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 174
Target Start/End: Original strand, 1148370 - 1148430
Alignment:
Q  114 agctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||| | |||||| |||| ||||  ||||||||||||||  |||||||||||||    
T  1148370 agctatgaagctcagacacttctcggattatacgtgttctggtgtcaaacacgtgtcgtgt 1148430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 6485624 - 6485660
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattat 210  Q
    ||||| |||||| ||||||||||||||||||||||||    
T  6485624 tgtaattacactaaattatgtgattttttcaaattat 6485660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 11596297 - 11596345
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggaca 164  Q
    ||||||||||||||||||||||  ||||||||||| | | |||||||||    
T  11596297 ctatgaagcacggacactcctcagattaggcgtgtcccgatgtcggaca 11596345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 11931410 - 11931362
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggaca 164  Q
    ||||||||||||||||||||  | |||||| |||| |||||||||||||    
T  11931410 ctatgaagcacggacactccatggattaggtgtgtcctggtgtcggaca 11931362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 165
Target Start/End: Original strand, 17425348 - 17425396
Alignment:
Q  117 tatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacac 165  Q
    |||||||||| ||||||||||| ||||||||||| || ||||| |||||    
T  17425348 tatgaagcacagacactcctcggattaggcgtgtccttgtgtctgacac 17425396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 17876285 - 17876237
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggaca 164  Q
    ||||||||||| ||||||||| | |||||| |||| |||||||||||||    
T  17876285 ctatgaagcacagacactccttggattaggtgtgtcctggtgtcggaca 17876237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 28964261 - 28964297
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattat 210  Q
    ||||| |||||| ||||||||||||||||||||||||    
T  28964261 tgtaattacactgaattatgtgattttttcaaattat 28964297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 165
Target Start/End: Complemental strand, 40965389 - 40965341
Alignment:
Q  117 tatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacac 165  Q
    |||||||||| ||||||||||  |||||||||||  |||||||||||||    
T  40965389 tatgaagcaccgacactcctcagattaggcgtgtcttggtgtcggacac 40965341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 47264116 - 47264060
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgt 172  Q
    ||||||||||| ||| ||| ||| ||||||||||| |||||||| |||| |||||||    
T  47264116 ctatgaagcacagacgctcttcggattaggcgtgtcctggtgtcagacatgtgtcgt 47264060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 243
Target Start/End: Complemental strand, 49431066 - 49431002
Alignment:
Q  180 tacacttaattatgtgatttttt-caaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    |||||| |||||||||||||||| |||||||| || ||||| || |||||| |||||| ||||||    
T  49431066 tacactgaattatgtgatttttttcaaattattagctgtgtcggcgtgtcactgtccgagtcgtg 49431002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 9e-17; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 18840953 - 18841095
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt---------------gtaactacacttaattatgtgatttt 200  Q
    ||||||||||||||||||||||| |||||| |||| | ||||||||||| |||||||||               |||| ||||||||||||||| |||||    
T  18840953 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacacttgtaattacacttaattatgtaatttt 18841052  T
Q  201 ttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    |||||||||| ||||||||  | |||||||||||| |||||||    
T  18841053 ttcaaattattagttgtgtcagcgtgtcagtgtccatgtcgtg 18841095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 26769641 - 26769583
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||||||||||| ||||||||||| |  ||||||||||||||||||||    
T  26769641 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgt 26769583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 174
Target Start/End: Original strand, 2438661 - 2438717
Alignment:
Q  118 atgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||||||||| ||||||||||| | ||||||||||| |||||||||    
T  2438661 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgt 2438717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 174
Target Start/End: Complemental strand, 35057000 - 35056940
Alignment:
Q  114 agctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||||||||||||  ||||||||||||   ||||||||||||||||||||    
T  35057000 agctatgaagcacggacactcctcagattaggcgtgtttccgtgtcggacacgtgtcgtgt 35056940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 174 - 241
Target Start/End: Original strand, 30717543 - 30717610
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcg 241  Q
    ||||| |||||| |||||||||||||||||||||||| || | ||| ||| |||||||||||||||||    
T  30717543 tgtaattacactgaattatgtgattttttcaaattattagctttgtcggtttgtcagtgtccgtgtcg 30717610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 19536410 - 19536480
Alignment:
Q  174 tgtaactacacttaattatgtgatttt-ttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||| |||||||||||||| |||||||||| |||||||| || |||||| |||||||||||||    
T  19536410 tgtaattacactgaattatgtgatttttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtg 19536480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 37419873 - 37419823
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacg 166  Q
    ||||||||||||||||||||||| ||||||||||| | |||||||||||||    
T  37419873 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacg 37419823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 37559096 - 37559042
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtc 170  Q
    ||||||||||||||||||||||| |||| |||||| | |||||||||||||||||    
T  37559096 ctatgaagcacggacactcctcggattaagcgtgtaccggtgtcggacacgtgtc 37559042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 38117099 - 38117157
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||||| ||||| ||||||||||| | |||||||||||||||| ||||    
T  38117099 ctatgaagcacggacacccctcggattaggcgtgtcccggtgtcggacacgtgttgtgt 38117157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 12940948 - 12941017
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||| |||||| ||||||||||||||||| ||||||||    ||||||||||||||||||||    
T  12940948 tgtaattacactgaattatatgattttttcaaattattagttgtgtcaacgtgtcagtgtccgtgtcgtg 12941017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 15657910 - 15657841
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||| ||||||||||||||| |||||||| ||||| || || |||| |||||||||||||||    
T  15657910 tgtaattacactgaattatgtgatttttacaaattattagttgagtcggcgtgttagtgtccgtgtcgtg 15657841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 20539687 - 20539756
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||| |||||| ||||||||||||||||| || ||||| |  ||||||||||||||||||||    
T  20539687 tgtaattacactaaattatatgattttttcaaattattagctgtgtcgacgtgtcagtgtccgtgtcgtg 20539756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 174
Target Start/End: Complemental strand, 28596587 - 28596530
Alignment:
Q  117 tatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||||||||||||| |||||| |||| |  ||||||||||||||||||||    
T  28596587 tatgaagcacggacactcctcggattaggagtgtccgagtgtcggacacgtgtcgtgt 28596530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 30335463 - 30335394
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||| |||||||| ||||||||||||||| |||||||| || |||  |||||||||||||||    
T  30335463 tgtaattacactaaattatgtcattttttcaaattattagttgtgtcggcgtgctagtgtccgtgtcgtg 30335394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 174
Target Start/End: Complemental strand, 44860449 - 44860392
Alignment:
Q  117 tatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||||||||||||||||| |||| | | |||||||||| ||||||||    
T  44860449 tatgaagcacggacactcctcgaattaggtgtgtcccgatgtcggacacatgtcgtgt 44860392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 174 - 242
Target Start/End: Complemental strand, 6940301 - 6940233
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgt 242  Q
    ||||| ||||||||||||||| | ||||| ||||||| || ||||| || |||||||||||||||||||    
T  6940301 tgtaattacacttaattatgtaactttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgt 6940233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 174 - 242
Target Start/End: Complemental strand, 15972919 - 15972851
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgt 242  Q
    ||||| |||||| |||| ||| ||||||||||||||| | |||||| || |||||||||||||||||||    
T  15972919 tgtaattacactgaattgtgtaattttttcaaattattaattgtgtcggcgtgtcagtgtccgtgtcgt 15972851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 174 - 242
Target Start/End: Complemental strand, 18422009 - 18421941
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgt 242  Q
    ||||| |||||| ||||||||||| |||| ||||||| | |||||| || |||||||||||||||||||    
T  18422009 tgtaattacactgaattatgtgatatttttaaattattaattgtgtcggcgtgtcagtgtccgtgtcgt 18421941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 174
Target Start/End: Original strand, 42511320 - 42511380
Alignment:
Q  114 agctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||||||||||||| ||||| ||||| |  ||||||||||||||| ||||    
T  42511320 agctatgaagcacggacactcctcggattagccgtgtccctgtgtcggacacgtgttgtgt 42511380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 243
Target Start/End: Original strand, 34785001 - 34785064
Alignment:
Q  180 tacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    |||||| |||||||||||||| | |||  || |||||||| |||||||||||||||||||||||    
T  34785001 tacactaaattatgtgattttctaaaaaaattagttgtgtcggtgtgtcagtgtccgtgtcgtg 34785064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 174 - 240
Target Start/End: Original strand, 21374712 - 21374778
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtc 240  Q
    ||||| |||||| |||||||| ||||||||||||||| || ||||| || |||| ||||||||||||    
T  21374712 tgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtc 21374778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 174 - 240
Target Start/End: Original strand, 30404863 - 30404929
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtc 240  Q
    ||||| |||||| |||||||||||||||||||||||| |   |||| || |||||||||||||||||    
T  30404863 tgtaattacactgaattatgtgattttttcaaattattaaccgtgtcggcgtgtcagtgtccgtgtc 30404929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 34006930 - 34006980
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacg 166  Q
    ||||||||||||||||||||| |||||||| |||||| |||||| ||||||    
T  34006930 ctatgaagcacggacactccttgaattaggtgtgttccggtgtcagacacg 34006980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 34993922 - 34993980
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||| |||||||| ||||||||||||| |  ||||||||||| ||||||||    
T  34993922 ctatgaagcacgaacactccttgaattaggcgtgtcccagtgtcggacacatgtcgtgt 34993980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 174 - 240
Target Start/End: Complemental strand, 37559023 - 37558957
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtc 240  Q
    ||||| |||| | ||||||||||||||| |||||||| || ||||| || |||||||||||||||||    
T  37559023 tgtaattacattgaattatgtgatttttacaaattattagctgtgtcggcgtgtcagtgtccgtgtc 37558957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 10535685 - 10535734
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacac 165  Q
    |||||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  10535685 ctatgaagcacgaacactcctcggattaggcgtgtcctggtgtcagacac 10535734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 24894427 - 24894370
Alignment:
Q  182 cacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgt 239  Q
    |||| |||||||||||||||| ||||||| || ||||| || ||||||||||||||||    
T  24894427 cactgaattatgtgatttttttaaattattagctgtgtcggcgtgtcagtgtccgtgt 24894370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 23718066 - 23718006
Alignment:
Q  180 tacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtc 240  Q
    |||||| |||||||||| ||| ||||||||| ||  |||| ||||||||||||||||||||    
T  23718066 tacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtc 23718006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 24105738 - 24105678
Alignment:
Q  180 tacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtc 240  Q
    |||||| |||||||||| ||| ||||||||| ||  |||| ||||||||||||||||||||    
T  24105738 tacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtc 24105678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 174
Target Start/End: Original strand, 30717457 - 30717517
Alignment:
Q  114 agctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||||||||||| | ||||||||| | |  |||||| |||||||||||||    
T  30717457 agctatgaagcacggacactccttggattaggcgtatcccagtgtcgaacacgtgtcgtgt 30717517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 174
Target Start/End: Complemental strand, 35449627 - 35449568
Alignment:
Q  117 tatgaagcacggacactcctcgaattagg--cgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||| ||||||||||| |||||   ||||||||||||||||||| |||||||||    
T  35449627 tatgaagcacagacactcctcggattagagacgtgttctggtgtcggacatgtgtcgtgt 35449568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 243
Target Start/End: Complemental strand, 21616802 - 21616739
Alignment:
Q  180 tacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    |||||| |||||||||||||| ||||||||| ||  |||| || ||||| ||||||||||||||    
T  21616802 tacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtccgtgtccgtgtcgtg 21616739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 242
Target Start/End: Original strand, 34337202 - 34337257
Alignment:
Q  187 aattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgt 242  Q
    |||||||||||||||||||||||| |  ||||| || |||||| ||||||||||||    
T  34337202 aattatgtgattttttcaaattatcaactgtgtcggcgtgtcaatgtccgtgtcgt 34337257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 11223793 - 11223850
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||||||||||  ||||||||||| | |||||| |||| |||||||||    
T  11223793 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcagaca-gtgtcgtgt 11223850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 15972992 - 15972934
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||||||| || ||| |||||| |||| | || ||||||||||||||||||    
T  15972992 ctatgaagcacggacattcttcggattaggtgtgtcccggcgtcggacacgtgtcgtgt 15972934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 23058455 - 23058525
Alignment:
Q  174 tgtaactacacttaattatgtgatttt-ttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| ||||||  ||||||||||||| |||||||||| | |||||| || |||||| |||||||||||||    
T  23058455 tgtaattacactggattatgtgatttttttcaaattattaattgtgtgggcgtgtcactgtccgtgtcgtg 23058525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 24009414 - 24009356
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||||||||| | || |||||||| |  ||||| ||||||||||||||    
T  24009414 ctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgt 24009356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 28412476 - 28412422
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtc 170  Q
    ||||||||||| ||| ||||||||||||| ||||| |  ||||||||||||||||    
T  28412476 ctatgaagcactgacgctcctcgaattagccgtgtcccagtgtcggacacgtgtc 28412422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 34784911 - 34784969
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||| |||||||||||||| |||||||| |  ||||| |||| |||||||||    
T  34784911 ctatgaagcacagacactcctcgaataaggcgtgtccccgtgtcagacaggtgtcgtgt 34784969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 242
Target Start/End: Original strand, 36756363 - 36756425
Alignment:
Q  180 tacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgt 242  Q
    |||||| |||||||| |||| |||||||||| |||||||| |  ||||||||||| |||||||    
T  36756363 tacactgaattatgttatttcttcaaattattagttgtgtcgacgtgtcagtgtctgtgtcgt 36756425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 241
Target Start/End: Complemental strand, 2331834 - 2331773
Alignment:
Q  180 tacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcg 241  Q
    |||||| |||||||||||||| ||||||||| | | ||||| | |||||| |||||||||||    
T  2331834 tacactgaattatgtgattttctcaaattattaatggtgtttgcgtgtcaatgtccgtgtcg 2331773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 14996171 - 14996212
Alignment:
Q  128 gacactcctcgaattaggcgtgttctggtgtcggacacgtgt 169  Q
    ||||||||||| ||||||||||||| |||||| |||||||||    
T  14996171 gacactcctcggattaggcgtgttccggtgtcagacacgtgt 14996212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 171
Target Start/End: Complemental strand, 15657992 - 15657939
Alignment:
Q  118 atgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcg 171  Q
    |||||||| |||||||||||| | ||||||||| | || |||||||||||||||    
T  15657992 atgaagcatggacactcctcggactaggcgtgtcccggcgtcggacacgtgtcg 15657939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 15909570 - 15909619
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacac 165  Q
    |||||||||||| |||||| ||||||||||||||| |  |||||||||||    
T  15909570 ctatgaagcacgaacactcttcgaattaggcgtgtccctgtgtcggacac 15909619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 173
Target Start/End: Original strand, 21782744 - 21782801
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtg 173  Q
    |||||||||||||||||||| |  ||||| ||||| | ||||| ||||||||||||||    
T  21782744 ctatgaagcacggacactccacagattagacgtgtcccggtgttggacacgtgtcgtg 21782801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 171
Target Start/End: Original strand, 12601140 - 12601196
Alignment:
Q  115 gctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcg 171  Q
    ||||||||| || |||||||||||||||||| ||||  |||||| ||||||| ||||    
T  12601140 gctatgaagtacagacactcctcgaattaggtgtgtcttggtgttggacacgcgtcg 12601196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 174
Target Start/End: Original strand, 19580223 - 19580283
Alignment:
Q  114 agctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||| ||||||| ||| |||||  ||||| |||||| |||||||||| ||||    
T  19580223 agctatgaagcacagacactcttcggattagatgtgttttggtgttggacacgtgttgtgt 19580283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 174
Target Start/End: Complemental strand, 19942382 - 19942326
Alignment:
Q  118 atgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||| |||||||||||| ||||||||||| | |||||| ||||| || |||||    
T  19942382 atgaagcatggacactcctcggattaggcgtgtcccggtgtcagacacatgccgtgt 19942326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 174
Target Start/End: Complemental strand, 27084390 - 27084330
Alignment:
Q  114 agctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||  ||||||||||  |||||||||||   ||||| |||||||||||||||    
T  27084390 agctatgaagcagagacactcctccgattaggcgtgtctcggtgttggacacgtgtcgtgt 27084330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 174
Target Start/End: Original strand, 36756275 - 36756331
Alignment:
Q  118 atgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||| ||||||||| | ||||||||||||  ||||||||||| |||| ||||    
T  36756275 atgaagcacagacactcctaggattaggcgtgttgcggtgtcggacatgtgttgtgt 36756331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 38117188 - 38117232
Alignment:
Q  190 tatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtc 234  Q
    ||||||||||||||||||||| || ||||| || |||||||||||    
T  38117188 tatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 38117232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 115 - 174
Target Start/End: Complemental strand, 3059 - 3000
Alignment:
Q  115 gctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||| ||||||||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  3059 gctatggagcacggacactcctcggattaggcgtgttccggtgtcgaacacgtgtcgtgt 3000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 4e-16; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 6326253 - 6326379
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgtgtaactacacttaattatgtgattttttcaaattatgagtt 215  Q
    |||||||||||||||||| |||||||||||||||||| |||||| ||| | || |   ||||| |||||| |||||||| ||||| ||||||||  ||      
T  6326253 ctatgaagcacggacacttctcgaattaggcgtgttccggtgtccgacgc-tgacacttgtaattacactgaattatgtaattttctcaaattactagcg 6326351  T
Q  216 gtgttggtgtgtcagtgtccgtgtcgtg 243  Q
     ||| || ||||||||||||||||||||    
T  6326352 atgtcggcgtgtcagtgtccgtgtcgtg 6326379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 243
Target Start/End: Original strand, 19552562 - 19552625
Alignment:
Q  180 tacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||||||||||||||||||||||||||||| |  ||||| || ||||||||||||||||||||    
T  19552562 tacacttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtg 19552625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 174 - 240
Target Start/End: Complemental strand, 14674315 - 14674249
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtc 240  Q
    ||||| |||||| |||||||||||||||||||||||| || ||||| || |||||||||||||||||    
T  14674315 tgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 14674249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 118 - 243
Target Start/End: Original strand, 21190998 - 21191138
Alignment:
Q  118 atgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt---------------gtaactacacttaattatgtgatttttt 202  Q
    ||||||||||||||||||||| ||||||||||| | || ||||||||||||| ||||               |||| |||||| ||||||||||||||||    
T  21190998 atgaagcacggacactcctcggattaggcgtgtcccggagtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatgtgatttttt 21191097  T
Q  203 caaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    |||||||| || ||||| ||  |||||||||||||||||||    
T  21191098 caaattattagctgtgtcggcatgtcagtgtccgtgtcgtg 21191138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 115 - 240
Target Start/End: Original strand, 21576684 - 21576824
Alignment:
Q  115 gctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtg---------------tgtaactacacttaattatgtgattt 199  Q
    |||||||||||||||||||||||| ||||||||||| |  ||||| |||||||||||||               ||||| |||||| |||||||||||||    
T  21576684 gctatgaagcacggacactcctcggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacatcgacacttgtaattacactgaattatgtgattt 21576783  T
Q  200 tttcaaattatgagttgtgttggtgtgtcagtgtccgtgtc 240  Q
    ||||||||||| || |||||||| || ||||||| ||||||    
T  21576784 tttcaaattattagctgtgttggcgtatcagtgttcgtgtc 21576824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 27932354 - 27932296
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||  |||||||||||||||||||||| |||||||| ||||||||||||||    
T  27932354 ctatgaagcacaaacactcctcgaattaggcgtgtcctggtgtccgacacgtgtcgtgt 27932296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 30098456 - 30098398
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||||||| |||||| |||||| |||| |||||||| ||||||||||||||    
T  30098456 ctatgaagcacggacattcctcggattaggtgtgtcctggtgtctgacacgtgtcgtgt 30098398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 42893479 - 42893421
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||| |||||||||||  ||||||||||| |||||||||||||||||| ||||    
T  42893479 ctatgaagcatggacactcctcatattaggcgtgtcctggtgtcggacacgtgttgtgt 42893421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 2437033 - 2436980
Alignment:
Q  113 gagctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacg 166  Q
    ||||||||||||||| |||||||||| |||||||||||  ||||||||||||||    
T  2437033 gagctatgaagcacgaacactcctcggattaggcgtgtcttggtgtcggacacg 2436980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 6247668 - 6247599
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||| |||||||||||||||||||||||| || ||||| || |||||||||| ||| |||||    
T  6247668 tgtaattacactgaattatgtgattttttcaaattattagatgtgtcggcgtgtcagtgtgcgtatcgtg 6247599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 169
Target Start/End: Complemental strand, 14873641 - 14873588
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgt 169  Q
    ||||||||||||||||||||||| ||||||||||| | ||||| ||||||||||    
T  14873641 ctatgaagcacggacactcctcggattaggcgtgtcccggtgttggacacgtgt 14873588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 235
Target Start/End: Original strand, 21351918 - 21351979
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtcc 235  Q
    ||||| |||||| |||||||||| |||||| |||||| |||||||| |||||||||||||||    
T  21351918 tgtaattacactgaattatgtgactttttccaattattagttgtgtcggtgtgtcagtgtcc 21351979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 21522796 - 21522727
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||| |||||||| ||||||| ||||||| || ||||| || ||||||||||||||||||||    
T  21522796 tgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtg 21522727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 21533362 - 21533293
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||| |||||||| ||||||| ||||||| || ||||| || ||||||||||||||||||||    
T  21533362 tgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtg 21533293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 24906314 - 24906383
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||| |||||||| ||||||||||||||| |  |||||||| |||||||||| |||||||||    
T  24906314 tgtaattacactgaattatgtcattttttcaaattattatctgtgttggcgtgtcagtgttcgtgtcgtg 24906383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 6770583 - 6770523
Alignment:
Q  180 tacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtc 240  Q
    |||||| |||||||||||||| | ||||||| ||||||||  |||||||||||||||||||    
T  6770583 tacactgaattatgtgattttcttaaattattagttgtgtcagtgtgtcagtgtccgtgtc 6770523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 32766872 - 32766928
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgt 172  Q
    ||||||||||||||||||||||  ||||| ||| | |||||||||||||||||||||    
T  32766872 ctatgaagcacggacactcctcagattagacgtatcctggtgtcggacacgtgtcgt 32766928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 174
Target Start/End: Complemental strand, 43001922 - 43001866
Alignment:
Q  118 atgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||||||||| ||||||||||| | |||||  ||||||||||||||    
T  43001922 atgaagcacggacactcctcggattaggcgtgtccaggtgtttgacacgtgtcgtgt 43001866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 243
Target Start/End: Complemental strand, 22013454 - 22013391
Alignment:
Q  180 tacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    |||||| |||||||| |||||| |||||||| || ||||| || ||||||||||||||||||||    
T  22013454 tacactaaattatgtaatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtg 22013391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 174
Target Start/End: Original strand, 39268541 - 39268596
Alignment:
Q  119 tgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||||||||||| ||||||||||| |  ||||||||||| ||||||||    
T  39268541 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacatgtcgtgt 39268596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 237
Target Start/End: Complemental strand, 39698587 - 39698524
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgt 237  Q
    ||||| |||||| |||||||||||||||||||||||| || |||||  | ||||||||||||||    
T  39698587 tgtaattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtgtccgt 39698524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 242
Target Start/End: Complemental strand, 41995504 - 41995449
Alignment:
Q  187 aattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgt 242  Q
    ||||||||||||||||| |||||| |||||||| || ||||||||||| |||||||    
T  41995504 aattatgtgattttttcgaattattagttgtgtcggcgtgtcagtgtctgtgtcgt 41995449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 150
Target Start/End: Original strand, 24906252 - 24906286
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgt 150  Q
    |||||||||||||||||||||||||||||||||||    
T  24906252 ctatgaagcacggacactcctcgaattaggcgtgt 24906286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 174
Target Start/End: Complemental strand, 30183675 - 30183621
Alignment:
Q  120 gaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||| |||||| |||||||||||||||| |  ||||||||||||||||||||    
T  30183675 gaagcacagacacttctcgaattaggcgtgtcccagtgtcggacacgtgtcgtgt 30183621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 31084447 - 31084389
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||| ||||||||||||||| ||||||| ||| |  ||||||||||||||||||||    
T  31084447 ctatgaaccacggacactcctcggattaggcatgtcccagtgtcggacacgtgtcgtgt 31084389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 39698671 - 39698613
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||||||||||| |||||||||||   ||||||||| || ||||||||    
T  39698671 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatacatgtcgtgt 39698613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 43565000 - 43564942
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||||||||| |||| ||||||||||| | || ||||||||| ||||||||    
T  43565000 ctatgaagcacggacacttctcggattaggcgtgtcccggcgtcggacacatgtcgtgt 43564942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 33178071 - 33178014
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagt 231  Q
    ||||| |||||| |||||||||||||||| ||||||| |||||||| || ||||||||    
T  33178071 tgtaattacactaaattatgtgatttttttaaattattagttgtgtcggcgtgtcagt 33178014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 37328857 - 37328926
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||| |||| |||||||||| ||||||||  | ||||| ||||| |||||||||||||||||    
T  37328857 tgtaattacactgaattttgtgatttttacaaattatttgctgtgtcggtgtatcagtgtccgtgtcgtg 37328926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 235
Target Start/End: Complemental strand, 42893406 - 42893345
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtcc 235  Q
    ||||| ||||||  ||||||||||||||||||||||| || ||||| |||||||| ||||||    
T  42893406 tgtaattacactggattatgtgattttttcaaattattagctgtgtcggtgtgtccgtgtcc 42893345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 168
Target Start/End: Complemental strand, 17088402 - 17088358
Alignment:
Q  124 cacggacactcctcgaattaggcgtgttctggtgtcggacacgtg 168  Q
    ||||||||||||||| ||||||||||| | |||||||||||||||    
T  17088402 cacggacactcctcggattaggcgtgtcccggtgtcggacacgtg 17088358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 19820328 - 19820376
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggaca 164  Q
    ||||||||||||||||||||||  ||||||||||| | |||||||||||    
T  19820328 ctatgaagcacggacactcctctgattaggcgtgtcccggtgtcggaca 19820376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 174
Target Start/End: Complemental strand, 21522882 - 21522822
Alignment:
Q  114 agctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||| |||||||||||| | | ||||||||||| | |||| ||||||||||||||||    
T  21522882 agctatgatgcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgt 21522822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 174
Target Start/End: Complemental strand, 21533448 - 21533388
Alignment:
Q  114 agctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||| |||||||||||| | | ||||||||||| | |||| ||||||||||||||||    
T  21533448 agctatgatgcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgt 21533388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 31084369 - 31084309
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtc 234  Q
    ||||| |||| | |||||||||||||||||||||||| || ||||| || |||||||||||    
T  31084369 tgtaattacattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 31084309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 35017162 - 35017110
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtg 168  Q
    ||||||||||||||||||||||| ||||||||||| | | ||| |||||||||    
T  35017162 ctatgaagcacggacactcctcggattaggcgtgtcccgatgttggacacgtg 35017110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 174
Target Start/End: Complemental strand, 7677836 - 7677777
Alignment:
Q  115 gctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||| ||| ||||||| ||||||||||| | ||||||||||| ||| |||||    
T  7677836 gctatgaagcaccgactctcctcggattaggcgtgtcccggtgtcggacatgtgacgtgt 7677777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 243
Target Start/End: Original strand, 13287418 - 13287481
Alignment:
Q  180 tacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    |||||| |||||||||||||||||||||||| |  ||||| |  |||| |||||||||||||||    
T  13287418 tacactgaattatgtgattttttcaaattattatctgtgtcgacgtgttagtgtccgtgtcgtg 13287481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 174
Target Start/End: Original strand, 21194062 - 21194121
Alignment:
Q  115 gctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||| |||||||||||||||||| ||||||||||  | |||||| |||| |||||||||    
T  21194062 gctataaagcacggacactcctcggattaggcgtgccccggtgtctgacatgtgtcgtgt 21194121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 166
Target Start/End: Original strand, 41558579 - 41558638
Alignment:
Q  107 acttctgagctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacg 166  Q
    |||||||| ||||||||||| ||||||| || |||||||||| | |||||||||| ||||    
T  41558579 acttctgatctatgaagcactgacactcttcaaattaggcgtatcctggtgtcggtcacg 41558638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 150
Target Start/End: Complemental strand, 10298669 - 10298635
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgt 150  Q
    ||||||||||||||||||||||| |||||||||||    
T  10298669 ctatgaagcacggacactcctcggattaggcgtgt 10298635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 174
Target Start/End: Complemental strand, 15382592 - 15382546
Alignment:
Q  128 gacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||| ||||||||||| | ||||||||||| |||||||||    
T  15382592 gacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgt 15382546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 16304366 - 16304424
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||||||| |||||| ||||| |||||   |||||||| ||||||||||||    
T  16304366 ctatgaagcacggacattcctcggattagacgtgtctcggtgtcgggcacgtgtcgtgt 16304424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 150
Target Start/End: Complemental strand, 17123166 - 17123132
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgt 150  Q
    ||||||||||||||||||||||| |||||||||||    
T  17123166 ctatgaagcacggacactcctcggattaggcgtgt 17123132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 168
Target Start/End: Original strand, 17593661 - 17593715
Alignment:
Q  114 agctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtg 168  Q
    |||||||||| |||||||||||||| |||| |||||| | ||||| |||||||||    
T  17593661 agctatgaagtacggacactcctcggattaagcgtgtcccggtgttggacacgtg 17593715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 150
Target Start/End: Original strand, 22423764 - 22423798
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgt 150  Q
    ||||||||||||||||||||||| |||||||||||    
T  22423764 ctatgaagcacggacactcctcggattaggcgtgt 22423798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 174
Target Start/End: Original strand, 36642696 - 36642749
Alignment:
Q  120 gaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||| |||||||||| ||||||||||| ||  ||||||||||||||||||||    
T  36642696 gaagcaccgacactcctccaattaggcgtg-tcccgtgtcggacacgtgtcgtgt 36642749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 240
Target Start/End: Complemental strand, 4105305 - 4105237
Alignment:
Q  174 tgtaactacacttaattatgtgat--tttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtc 240  Q
    ||||| |||||| |||||||||||  ||||||||||||| |||| ||| || |||||||| ||||||||    
T  4105305 tgtaattacactgaattatgtgatcttttttcaaattattagttatgtcggcgtgtcagtatccgtgtc 4105237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 152
Target Start/End: Original strand, 18586232 - 18586265
Alignment:
Q  119 tgaagcacggacactcctcgaattaggcgtgttc 152  Q
    ||||||||||||||||||||||||||| ||||||    
T  18586232 tgaagcacggacactcctcgaattaggtgtgttc 18586265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 19579739 - 19579682
Alignment:
Q  182 cacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgt 239  Q
    |||| |||||||||||||| ||||||||| || ||||| || || |||||||||||||    
T  19579739 cactaaattatgtgattttctcaaattattagctgtgtcggcgtatcagtgtccgtgt 19579682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 174
Target Start/End: Complemental strand, 21542159 - 21542102
Alignment:
Q  117 tatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||| ||||||||| |||| | ||| ||||||| | |||||||||||||||||||||    
T  21542159 tatgatgcacggacattccttggattcggcgtgtcccggtgtcggacacgtgtcgtgt 21542102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 43564921 - 43564863
Alignment:
Q  180 tacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtc 240  Q
    |||||| ||||||||||||||| ||||||||||  ||||| || |||||||||| ||||||    
T  43564921 tacactaaattatgtgatttttccaaattatga--tgtgtcggcgtgtcagtgttcgtgtc 43564863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 10298601 - 10298553
Alignment:
Q  188 attatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccg 236  Q
    ||||||||| ||||||||||||| |||||||| || |||| ||||||||    
T  10298601 attatgtgactttttcaaattattagttgtgtcggcgtgttagtgtccg 10298553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 243
Target Start/End: Complemental strand, 14422942 - 14422881
Alignment:
Q  180 tacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    |||||| |||||||||||||||  ||||||| || ||| | ||||||||||||||| |||||||    
T  14422942 tacactgaattatgtgattttt--aaattattagctgtatcggtgtgtcagtgtccttgtcgtg 14422881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 17123085 - 17123033
Alignment:
Q  183 acttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtcc 235  Q
    |||| ||||||||||||| ||||||||| ||  ||||||| ||||||||||||    
T  17123085 acttgattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtcc 17123033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 242
Target Start/End: Original strand, 17177056 - 17177104
Alignment:
Q  194 tgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgt 242  Q
    ||||||||||||||||| || |||||||| || |||||||||| |||||    
T  17177056 tgattttttcaaattattagctgtgttggcgtatcagtgtccgagtcgt 17177104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 19168840 - 19168900
Alignment:
Q  180 tacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtc 240  Q
    |||||| ||| |||||||||| ||||||||  ||  |||| ||||||||||||||||||||    
T  19168840 tacactgaataatgtgattttatcaaattaatagcggtgtaggtgtgtcagtgtccgtgtc 19168900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 243
Target Start/End: Original strand, 22423838 - 22423894
Alignment:
Q  187 aattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    |||||||||||||| ||||||||| ||| ||||  | |||||||| |||||||||||    
T  22423838 aattatgtgattttctcaaattattagtagtgtcagggtgtcagtatccgtgtcgtg 22423894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 174
Target Start/End: Original strand, 23015926 - 23015982
Alignment:
Q  118 atgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||| ||||||||||||| ||||||||||| |   |||||||||| ||||||||    
T  23015926 atgaagctcggacactcctcggattaggcgtgtcccaatgtcggacacatgtcgtgt 23015982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 38464313 - 38464361
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggaca 164  Q
    ||||||||||| ||||||||||| |||||| |||| | |||||||||||    
T  38464313 ctatgaagcacagacactcctcggattaggtgtgtcccggtgtcggaca 38464361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 8564 - 8622
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||||||||||||||||||||||| |  ||||||||||||| ||||||    
T  8564 ctatgaagcacggacactcctcgaattaggcgtgtaccagtgtcggacacgtatcgtgt 8622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 174 - 240
Target Start/End: Complemental strand, 51857 - 51791
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtc 240  Q
    ||||| |||||| |||||||||||||||||||||||| || ||||| || |||||||||||||||||    
T  51857 tgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 51791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 178831 - 178901
Alignment:
Q  174 tgtaactacacttaattatg-tgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||| ||||||| ||||||||||||||||| |||||||| || ||||||||||||||||||||    
T  178831 tgtaattacactgaattatgatgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtg 178901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 241724 - 241666
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||||||||| |||| ||||||||||| | |||||||||||||||||||||    
T  241724 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgt 241666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 180 - 243
Target Start/End: Complemental strand, 241634 - 241571
Alignment:
Q  180 tacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    |||||| ||||||||||||||| |||||||| || ||||| || ||||||||||||||||||||    
T  241634 tacactaaattatgtgatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtg 241571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 237
Target Start/End: Complemental strand, 348142 - 348083
Alignment:
Q  180 tacacttaattatgtgatt--ttttcaaattatgagttgtgttggtgtgtcagtgtccgt 237  Q
    |||||||||||||||||||  |||| ||||| | || || ||||||||||||||||||||    
T  348142 tacacttaattatgtgatttttttttaaatttttagctgggttggtgtgtcagtgtccgt 348083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 20218 - 20149
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||| |||||||||||||||||||||||| || ||||| || |||||| |||||||||||||    
T  20218 tgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtg 20149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 225199 - 225247
Alignment:
Q  118 atgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacg 166  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  225199 atgaagcacggacactcctcgaattaggcgtgtcctggtgtcgaacacg 225247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 243
Target Start/End: Complemental strand, 8924 - 8775
Alignment:
Q  109 ttctgagctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt---------------gtaactacacttaattatg 193  Q
    |||||| |||||||||||||| |||||||  |||||||||||   |||||||||||||||||||||               |||| |||||| ||| ||     
T  8924 ttctgatctatgaagcacggagactcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaataata 8825  T
Q  194 tgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||||||||||||||| || ||||| || ||||||||||||||||||||    
T  8824 tgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtg 8775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 4821 - 4879
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||||||||||| ||||||||||| |  |||||||||| |||||||||    
T  4821 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt 4879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 398 - 460
Alignment:
Q  112 tgagctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||| |||||||||||||||||||||| |||||| |||| | ||||||||||||| |||||||    
T  398 tgagttatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgt 460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 475 - 544
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||| |||| ||||||||||||||||||| ||  |||| || || |||||||||||| ||||    
T  475 tgtaattacactgaattttgtgattttttcaaattattagcagtgtcggcgtatcagtgtccgtggcgtg 544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 13438 - 13380
Alignment:
Q  182 cacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtc 240  Q
    |||| |||||||||||||| ||||||||| |||||||| || |||||||||||||||||    
T  13438 cactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtc 13380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 174
Target Start/End: Complemental strand, 13523 - 13467
Alignment:
Q  118 atgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||||||| | |||||| |||| || ||||| ||| ||||||||||    
T  13523 atgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgt 13467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 21889 - 21947
Alignment:
Q  182 cacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtc 240  Q
    |||| |||||||||||||| ||||||||| |||||||| || |||||||||||||||||    
T  21889 cactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtc 21947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 174
Target Start/End: Original strand, 21804 - 21860
Alignment:
Q  118 atgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||||||| | |||||| |||| || ||||| ||| ||||||||||    
T  21804 atgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgt 21860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 46728 - 46659
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||| |||||||||||||||||||||||| |  ||||| || |||||| |||||||||||||    
T  46728 tgtaattacactgaattatgtgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtg 46659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 150
Target Start/End: Complemental strand, 46776 - 46742
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgt 150  Q
    ||||||||||||||||||||||| |||||||||||    
T  46776 ctatgaagcacggacactcctcggattaggcgtgt 46742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 174
Target Start/End: Complemental strand, 92940 - 92883
Alignment:
Q  117 tatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||||||||||||| ||||||||||| | |||||| |||| |||||||||    
T  92940 tatgaagcacggacactcctcggattaggcgtgtccaggtgtccgacatgtgtcgtgt 92883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 174
Target Start/End: Complemental strand, 70399 - 70339
Alignment:
Q  114 agctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||| ||||||||| |||||| ||| ||||||| ||| |||||||||||||||||||||||    
T  70399 agctttgaagcacgaacactcatcggattaggcatgtcctggtgtcggacacgtgtcgtgt 70339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 228
Target Start/End: Complemental strand, 14646 - 14522
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt------------gtaactacacttaattatgtgattttttc 203  Q
    |||||||||||| ||||||||   |||||||||||   |||||||||||||||||||||            |||| |||||| |||||||||||||||||    
T  14646 ctatgaagcacgtacactccttcgattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccacttgtaattacactgaattatgtgattttttc 14547  T
Q  204 aaattatgagttgtgttggtgtgtc 228  Q
    ||||||| |||||||| || |||||    
T  14546 aaattattagttgtgtcggcgtgtc 14522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 243
Target Start/End: Complemental strand, 90883 - 90820
Alignment:
Q  180 tacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    |||||| |||||| ||||||| ||||||||| | | ||||||||||||||||||| ||||||||    
T  90883 tacactgaattatatgattttctcaaattattaatggtgttggtgtgtcagtgtctgtgtcgtg 90820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 90962 - 90904
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||  |||||| | | |||||||||||| ||||||||||||||||| ||||    
T  90962 ctatgaagcacatacactcattggattaggcgtgttttggtgtcggacacgtgttgtgt 90904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 8720 - 8662
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||||||||||| | ||||||||| | |  ||||||||||||||||||||    
T  8720 ctatgaagcacggacactccttggattaggcgtatcccagtgtcggacacgtgtcgtgt 8662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 71855 - 71797
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||| ||||||||||| ||||| ||||| | |||||||||||||||| ||||    
T  71855 ctatgaagcaccgacactcctcggattagtcgtgtcccggtgtcggacacgtgttgtgt 71797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 19621 - 19553
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||| ||||||||||||||| |||||||| |||||| | || ||||||||||| ||||||||    
T  19621 tgtaattacactgaattatgtgattttt-caaattattagttgtatcggcgtgtcagtgtcagtgtcgtg 19553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 17762 - 17807
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgt 219  Q
    ||||| |||||| |||||||||||||||||||||||| ||||||||    
T  17762 tgtaattacactaaattatgtgattttttcaaattattagttgtgt 17807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 174
Target Start/End: Original strand, 263303 - 263359
Alignment:
Q  118 atgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||| ||||||||||||||| |||||||||||  |||| ||| |||||||||||||    
T  263303 atgaaccacggacactcctcggattaggcgtgtcttggtatcgaacacgtgtcgtgt 263359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 162
Target Start/End: Complemental strand, 188512 - 188473
Alignment:
Q  123 gcacggacactcctcgaattaggcgtgttctggtgtcgga 162  Q
    |||||||||||||||| ||||||||||| |||||||||||    
T  188512 gcacggacactcctcggattaggcgtgtcctggtgtcgga 188473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 242
Target Start/End: Complemental strand, 1075 - 1013
Alignment:
Q  180 tacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgt 242  Q
    |||||| |||||||| ||||||||||||||| ||  |||| |||||||||| ||| |||||||    
T  1075 tacactgaattatgtaattttttcaaattattagcggtgtcggtgtgtcagcgtctgtgtcgt 1013  T

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Target: scaffold0475 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 150
Target Start/End: Complemental strand, 3427 - 3393
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgt 150  Q
    ||||||||||||||||||||||| |||||||||||    
T  3427 ctatgaagcacggacactcctcggattaggcgtgt 3393  T

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Target: scaffold0136 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 3778 - 3836
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||| |||||||||||| |||||||||||   | ||||||||| |||||||||    
T  3778 ctatgaagcaaggacactcctcggattaggcgtgtctcgatgtcggacatgtgtcgtgt 3836  T

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Target: scaffold0021 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 2978 - 3036
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    |||||||||||||||||||| |  ||||||||||||   |||||||||| |||||||||    
T  2978 ctatgaagcacggacactccccatattaggcgtgtttcagtgtcggacatgtgtcgtgt 3036  T

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Target: scaffold0021; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 130528 - 130459
Alignment:
Q  174 tgtaactacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    ||||| |||||| |||||||||||||||||||| ||| |  ||||| ||  ||||| |||||||||||||    
T  130528 tgtaattacactgaattatgtgattttttcaaactattaactgtgtcggcttgtcattgtccgtgtcgtg 130459  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 135263 - 135313
Alignment:
Q  116 ctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacg 166  Q
    |||||||||||| |||| ||||  ||||||||||| |||||||||||||||    
T  135263 ctatgaagcacgaacacgcctcagattaggcgtgtcctggtgtcggacacg 135313  T

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Target: scaffold0512 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 174
Target Start/End: Original strand, 4974 - 5034
Alignment:
Q  114 agctatgaagcacggacactcctcgaattaggcgtgttctggtgtcggacacgtgtcgtgt 174  Q
    ||||||||||||| ||||||||||| ||||||| |||     |||||||||||||||||||    
T  4974 agctatgaagcacagacactcctcggattaggcatgtctcaatgtcggacacgtgtcgtgt 5034  T

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Target: scaffold0311 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 243
Target Start/End: Original strand, 10509 - 10553
Alignment:
Q  199 ttttcaaattatgagttgtgttggtgtgtcagtgtccgtgtcgtg 243  Q
    |||||||||||| || ||||| ||||||| |||||||||||||||    
T  10509 ttttcaaattattagctgtgtcggtgtgttagtgtccgtgtcgtg 10553  T

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Target: scaffold0227 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 7330 - 7378
Alignment:
Q  180 tacacttaattatgtgattttttcaaattatgagttgtgttggtgtgtc 228  Q
    |||||| ||||||||||||||| |||||||| |||||||| || |||||    
T  7330 tacactaaattatgtgatttttccaaattattagttgtgtcggcgtgtc 7378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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