View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11341_low_3 (Length: 445)

Name: NF11341_low_3
Description: NF11341
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11341_low_3
NF11341_low_3
[»] chr6 (44 HSPs)
chr6 (5-435)||(19486258-19486688)
chr6 (8-372)||(21474490-21474854)
chr6 (8-399)||(25770734-25771125)
chr6 (141-425)||(16813663-16813947)
chr6 (211-425)||(8720679-8720893)
chr6 (121-370)||(25958782-25959031)
chr6 (6-399)||(19455911-19456304)
chr6 (6-399)||(19466056-19466449)
chr6 (6-399)||(14376916-14377309)
chr6 (1-334)||(30678089-30678422)
chr6 (6-333)||(24367288-24367615)
chr6 (6-399)||(18797578-18797971)
chr6 (6-371)||(19437890-19438255)
chr6 (6-98)||(15462224-15462316)
chr6 (6-98)||(10466149-10466241)
chr6 (8-96)||(24515717-24515805)
chr6 (6-137)||(34642848-34642979)
chr6 (17-113)||(18182653-18182749)
chr6 (6-83)||(16924956-16925033)
chr6 (6-86)||(21567304-21567384)
chr6 (8-254)||(23084970-23085216)
chr6 (6-83)||(5836544-5836621)
chr6 (287-372)||(10465875-10465960)
chr6 (6-83)||(23081311-23081388)
chr6 (286-399)||(24515414-24515527)
chr6 (6-83)||(2872118-2872195)
chr6 (6-83)||(16574778-16574855)
chr6 (6-83)||(16620525-16620602)
chr6 (6-83)||(29589755-29589832)
chr6 (6-80)||(27190324-27190398)
chr6 (6-80)||(27258842-27258916)
chr6 (6-83)||(18405260-18405337)
chr6 (6-83)||(25115440-25115517)
chr6 (6-83)||(27559285-27559362)
chr6 (6-83)||(28312518-28312595)
chr6 (22-62)||(18401549-18401589)
chr6 (6-98)||(22436757-22436849)
chr6 (281-320)||(15462499-15462538)
chr6 (16-83)||(22829702-22829769)
chr6 (17-62)||(16100914-16100959)
chr6 (26-83)||(24293098-24293155)
chr6 (6-83)||(28260513-28260590)
chr6 (6-83)||(28285326-28285403)
chr6 (6-83)||(28339262-28339339)
[»] chr8 (39 HSPs)
chr8 (5-435)||(20391175-20391605)
chr8 (121-428)||(6606738-6607045)
chr8 (8-398)||(22373961-22374351)
chr8 (8-369)||(19985272-19985633)
chr8 (5-399)||(21928517-21928911)
chr8 (6-369)||(16268552-16268915)
chr8 (6-137)||(22027840-22027971)
chr8 (6-232)||(31413997-31414223)
chr8 (6-137)||(28984001-28984132)
chr8 (6-137)||(28989220-28989351)
chr8 (6-98)||(29301025-29301117)
chr8 (6-137)||(22053953-22054084)
chr8 (8-80)||(22375071-22375143)
chr8 (6-83)||(22421506-22421583)
chr8 (286-398)||(22027579-22027691)
chr8 (286-333)||(28984281-28984328)
chr8 (6-83)||(17671636-17671713)
chr8 (6-83)||(19115490-19115567)
chr8 (6-83)||(20015877-20015954)
chr8 (6-83)||(22031193-22031270)
chr8 (6-83)||(22117789-22117866)
chr8 (6-83)||(22126573-22126650)
chr8 (6-83)||(22129231-22129308)
chr8 (6-83)||(30310758-30310835)
chr8 (6-83)||(32603235-32603312)
chr8 (6-98)||(19981057-19981149)
chr8 (121-188)||(21982451-21982518)
chr8 (121-188)||(21998937-21999004)
chr8 (6-61)||(22523636-22523691)
chr8 (6-188)||(22245524-22245706)
chr8 (6-188)||(22245942-22246124)
chr8 (6-83)||(18859667-18859744)
chr8 (6-83)||(19481686-19481763)
chr8 (13-213)||(21391345-21391545)
chr8 (13-213)||(21780671-21780871)
chr8 (121-188)||(21329776-21329843)
chr8 (16-83)||(22042927-22042994)
chr8 (282-332)||(20015628-20015678)
chr8 (6-83)||(22990135-22990212)
[»] chr5 (54 HSPs)
chr5 (5-435)||(21983178-21983608)
chr5 (5-435)||(21561026-21561456)
chr5 (121-415)||(23669685-23669979)
chr5 (74-369)||(16258103-16258398)
chr5 (74-369)||(22591822-22592117)
chr5 (74-369)||(22595377-22595672)
chr5 (121-415)||(43122520-43122814)
chr5 (6-367)||(23563237-23563598)
chr5 (5-334)||(21631501-21631830)
chr5 (6-328)||(20824391-20824713)
chr5 (7-399)||(23077942-23078334)
chr5 (6-99)||(14884328-14884421)
chr5 (6-98)||(20345220-20345312)
chr5 (6-99)||(20778851-20778944)
chr5 (6-131)||(22505617-22505742)
chr5 (6-98)||(25851010-25851102)
chr5 (6-95)||(22464888-22464977)
chr5 (6-99)||(28892279-28892372)
chr5 (6-99)||(17266671-17266764)
chr5 (286-413)||(22505897-22506024)
chr5 (1-213)||(21410085-21410297)
chr5 (283-369)||(14884058-14884144)
chr5 (286-369)||(20345500-20345583)
chr5 (286-333)||(25851290-25851337)
chr5 (286-372)||(21870342-21870428)
chr5 (286-372)||(21874622-21874708)
chr5 (13-83)||(26736080-26736150)
chr5 (6-83)||(14997092-14997169)
chr5 (6-83)||(21332339-21332416)
chr5 (6-83)||(37288849-37288926)
chr5 (6-83)||(16359458-16359535)
chr5 (6-83)||(19772916-19772993)
chr5 (6-83)||(22330240-22330317)
chr5 (6-83)||(23526007-23526084)
chr5 (6-83)||(27521362-27521439)
chr5 (6-83)||(27613312-27613389)
chr5 (6-83)||(27665843-27665920)
chr5 (6-83)||(27682753-27682830)
chr5 (6-83)||(29473426-29473503)
chr5 (6-83)||(34569450-34569527)
chr5 (6-83)||(40711736-40711813)
chr5 (6-83)||(41773798-41773875)
chr5 (6-209)||(21882730-21882933)
chr5 (6-83)||(18782070-18782147)
chr5 (6-83)||(22137624-22137701)
chr5 (26-83)||(23460947-23461004)
chr5 (6-83)||(25429377-25429454)
chr5 (6-98)||(23474151-23474243)
chr5 (287-334)||(23474431-23474478)
chr5 (6-64)||(20803553-20803611)
chr5 (282-332)||(27613588-27613638)
chr5 (287-328)||(20779132-20779173)
chr5 (6-83)||(22350875-22350952)
chr5 (287-328)||(28892050-28892091)
[»] chr7 (48 HSPs)
chr7 (8-432)||(12203609-12204033)
chr7 (8-398)||(19150027-19150417)
chr7 (8-398)||(20749426-20749816)
chr7 (8-399)||(12798346-12798734)
chr7 (8-372)||(14261115-14261479)
chr7 (5-371)||(15099473-15099839)
chr7 (6-369)||(13965540-13965903)
chr7 (6-413)||(26115418-26115825)
chr7 (6-137)||(26091902-26092033)
chr7 (6-137)||(49155315-49155446)
chr7 (6-131)||(21755426-21755551)
chr7 (6-134)||(40924924-40925052)
chr7 (6-399)||(13024359-13024751)
chr7 (7-328)||(15627538-15627859)
chr7 (6-99)||(16947614-16947707)
chr7 (6-137)||(18051057-18051188)
chr7 (6-137)||(11385533-11385664)
chr7 (6-136)||(15343445-15343575)
chr7 (6-99)||(14140693-14140786)
chr7 (6-99)||(14283516-14283609)
chr7 (6-98)||(12459642-12459734)
chr7 (6-96)||(13676465-13676555)
chr7 (286-399)||(13676745-13676858)
chr7 (286-369)||(26091670-26091753)
chr7 (286-369)||(40924689-40924772)
chr7 (286-362)||(49155595-49155671)
chr7 (287-372)||(12459923-12460008)
chr7 (6-125)||(17703593-17703712)
chr7 (286-413)||(21755706-21755833)
chr7 (6-83)||(8710618-8710695)
chr7 (6-83)||(9591377-9591454)
chr7 (6-83)||(13689054-13689131)
chr7 (6-83)||(14335409-14335486)
chr7 (6-83)||(44788531-44788608)
chr7 (121-213)||(15114330-15114422)
chr7 (6-125)||(16726579-16726698)
chr7 (6-83)||(11234393-11234470)
chr7 (6-83)||(11550282-11550359)
chr7 (6-83)||(14042708-14042785)
chr7 (286-347)||(14283268-14283329)
chr7 (6-83)||(14352738-14352815)
chr7 (6-83)||(14957567-14957644)
chr7 (6-83)||(15158237-15158314)
chr7 (6-83)||(18587351-18587428)
chr7 (57-88)||(12712816-12712847)
chr7 (6-81)||(15146105-15146180)
chr7 (287-329)||(16947384-16947426)
chr7 (6-83)||(18180756-18180833)
[»] chr3 (71 HSPs)
chr3 (5-435)||(15230255-15230685)
chr3 (5-435)||(15236123-15236553)
chr3 (5-399)||(12857579-12857972)
chr3 (74-369)||(2037025-2037320)
chr3 (74-369)||(2040766-2041061)
chr3 (74-369)||(14039467-14039762)
chr3 (121-415)||(15008651-15008942)
chr3 (5-399)||(14290615-14291009)
chr3 (11-399)||(35982839-35983227)
chr3 (5-368)||(16825393-16825758)
chr3 (6-369)||(28756972-28757335)
chr3 (6-399)||(11958264-11958657)
chr3 (6-437)||(31692230-31692661)
chr3 (6-137)||(10408621-10408752)
chr3 (6-328)||(10417199-10417521)
chr3 (6-137)||(16327054-16327185)
chr3 (6-372)||(12357637-12358003)
chr3 (121-314)||(13028524-13028717)
chr3 (6-371)||(17494300-17494664)
chr3 (6-98)||(12509867-12509959)
chr3 (6-137)||(16831873-16832004)
chr3 (6-137)||(47126597-47126728)
chr3 (6-399)||(31941556-31941949)
chr3 (6-371)||(12180997-12181362)
chr3 (6-137)||(8744735-8744866)
chr3 (6-137)||(13317879-13318010)
chr3 (6-137)||(13944677-13944808)
chr3 (6-96)||(11949311-11949401)
chr3 (6-99)||(16378317-16378410)
chr3 (6-99)||(17189027-17189120)
chr3 (6-95)||(24189957-24190046)
chr3 (6-96)||(18131733-18131822)
chr3 (1-213)||(15013038-15013250)
chr3 (286-369)||(47126877-47126960)
chr3 (286-399)||(18131430-18131543)
chr3 (6-83)||(15262273-15262350)
chr3 (121-188)||(2247148-2247215)
chr3 (286-369)||(10408901-10408984)
chr3 (8-62)||(12272993-12273047)
chr3 (281-415)||(13317636-13317770)
chr3 (6-64)||(14873997-14874055)
chr3 (6-83)||(3688586-3688663)
chr3 (6-83)||(10008243-10008320)
chr3 (6-83)||(10908853-10908930)
chr3 (6-83)||(12843513-12843590)
chr3 (6-83)||(12889352-12889429)
chr3 (6-83)||(13255333-13255410)
chr3 (6-83)||(15345655-15345732)
chr3 (6-83)||(15358726-15358803)
chr3 (6-83)||(15586802-15586879)
chr3 (6-83)||(15713466-15713543)
chr3 (6-83)||(43165318-43165395)
chr3 (6-83)||(48428090-48428167)
chr3 (26-113)||(11861037-11861124)
chr3 (8-83)||(26790823-26790898)
chr3 (6-64)||(5422359-5422417)
chr3 (6-83)||(6603378-6603455)
chr3 (6-83)||(15399927-15400004)
chr3 (6-83)||(16638416-16638493)
chr3 (6-83)||(16754111-16754188)
chr3 (6-83)||(16804357-16804434)
chr3 (6-83)||(20059464-20059541)
chr3 (6-83)||(23079427-23079504)
chr3 (6-83)||(24185833-24185910)
chr3 (6-83)||(53382428-53382505)
chr3 (289-413)||(19727686-19727810)
chr3 (286-399)||(16326790-16326905)
chr3 (6-64)||(15065714-15065772)
chr3 (17-62)||(15944026-15944071)
chr3 (286-371)||(16831639-16831724)
chr3 (6-118)||(16694807-16694919)
[»] scaffold0004 (3 HSPs)
scaffold0004 (8-435)||(200299-200717)
scaffold0004 (6-372)||(325760-326125)
scaffold0004 (258-372)||(319548-319662)
[»] scaffold0509 (1 HSPs)
scaffold0509 (6-343)||(11881-12218)
[»] scaffold0130 (2 HSPs)
scaffold0130 (5-432)||(3717-4141)
scaffold0130 (6-64)||(7972-8030)
[»] chr2 (37 HSPs)
chr2 (121-428)||(28350645-28350952)
chr2 (180-435)||(21901366-21901621)
chr2 (8-227)||(23113380-23113598)
chr2 (6-372)||(19716439-19716805)
chr2 (9-372)||(19721002-19721365)
chr2 (6-137)||(20848244-20848375)
chr2 (6-371)||(23274248-23274613)
chr2 (6-137)||(12577008-12577139)
chr2 (6-137)||(23097675-23097806)
chr2 (1-113)||(30208601-30208713)
chr2 (6-337)||(24817297-24817628)
chr2 (4-98)||(19817500-19817594)
chr2 (6-83)||(9338237-9338314)
chr2 (6-83)||(9486871-9486948)
chr2 (6-83)||(10871505-10871582)
chr2 (6-83)||(16983895-16983972)
chr2 (6-83)||(17001655-17001732)
chr2 (6-83)||(22323053-22323130)
chr2 (6-83)||(24265025-24265102)
chr2 (6-83)||(24705193-24705270)
chr2 (6-83)||(24712689-24712766)
chr2 (6-83)||(44383281-44383358)
chr2 (6-118)||(11351387-11351499)
chr2 (6-98)||(21322962-21323054)
chr2 (6-98)||(45673708-45673800)
chr2 (286-333)||(20848524-20848570)
chr2 (6-64)||(21142771-21142829)
chr2 (6-80)||(27220671-27220745)
chr2 (6-64)||(27373924-27373982)
chr2 (286-332)||(22462943-22462989)
chr2 (6-64)||(23029191-23029249)
chr2 (6-83)||(22742677-22742754)
chr2 (6-83)||(23065068-23065145)
chr2 (6-83)||(23074518-23074595)
chr2 (6-83)||(24874461-24874538)
chr2 (26-86)||(22280780-22280840)
chr2 (17-85)||(22739363-22739431)
[»] chr4 (41 HSPs)
chr4 (141-435)||(8708836-8709130)
chr4 (121-428)||(13879248-13879555)
chr4 (5-399)||(15073382-15073776)
chr4 (32-398)||(14993223-14993589)
chr4 (6-436)||(16150660-16151090)
chr4 (6-436)||(16154806-16155236)
chr4 (6-415)||(27903409-27903818)
chr4 (6-372)||(20893055-20893421)
chr4 (6-137)||(3261911-3262042)
chr4 (6-369)||(7357291-7357654)
chr4 (6-372)||(11204114-11204480)
chr4 (6-367)||(44658753-44659114)
chr4 (6-134)||(29450657-29450785)
chr4 (8-371)||(15266802-15267165)
chr4 (6-137)||(51603909-51604040)
chr4 (6-137)||(53750587-53750718)
chr4 (6-334)||(14697125-14697453)
chr4 (39-96)||(15354234-15354291)
chr4 (286-369)||(29450422-29450505)
chr4 (286-369)||(3261679-3261762)
chr4 (6-83)||(16219212-16219289)
chr4 (6-83)||(16222532-16222609)
chr4 (6-83)||(15946-16023)
chr4 (6-83)||(8050534-8050611)
chr4 (6-83)||(8389436-8389513)
chr4 (6-83)||(12479624-12479701)
chr4 (6-83)||(13513374-13513451)
chr4 (6-83)||(14300890-14300967)
chr4 (6-83)||(16233903-16233980)
chr4 (6-83)||(17092060-17092137)
chr4 (6-83)||(19635160-19635237)
chr4 (6-83)||(19775704-19775781)
chr4 (6-83)||(23958771-23958848)
chr4 (6-83)||(27714360-27714437)
chr4 (6-125)||(16350423-16350542)
chr4 (6-64)||(18224376-18224434)
chr4 (6-83)||(14683591-14683668)
chr4 (286-371)||(18259745-18259830)
chr4 (6-83)||(40476064-40476141)
chr4 (6-83)||(14162494-14162571)
chr4 (16-80)||(18604733-18604797)
[»] scaffold0192 (1 HSPs)
scaffold0192 (7-399)||(29581-29973)
[»] scaffold0609 (2 HSPs)
scaffold0609 (121-372)||(1107-1358)
scaffold0609 (300-428)||(7904-8032)
[»] scaffold0585 (1 HSPs)
scaffold0585 (5-347)||(3999-4341)
[»] scaffold0865 (1 HSPs)
scaffold0865 (8-372)||(1157-1521)
[»] scaffold0133 (1 HSPs)
scaffold0133 (8-372)||(28170-28534)
[»] scaffold0046 (2 HSPs)
scaffold0046 (5-399)||(70160-70554)
scaffold0046 (5-71)||(60791-60857)
[»] scaffold0104 (1 HSPs)
scaffold0104 (8-372)||(43304-43668)
[»] scaffold0020 (2 HSPs)
scaffold0020 (5-372)||(176040-176406)
scaffold0020 (9-371)||(98469-98831)
[»] scaffold0335 (1 HSPs)
scaffold0335 (5-399)||(4162-4556)
[»] chr1 (41 HSPs)
chr1 (217-428)||(18273048-18273259)
chr1 (8-372)||(21742506-21742870)
chr1 (5-372)||(21738990-21739357)
chr1 (8-371)||(22015700-22016063)
chr1 (6-399)||(24096542-24096935)
chr1 (6-137)||(48425943-48426074)
chr1 (8-399)||(19857346-19857737)
chr1 (6-137)||(38910015-38910146)
chr1 (6-131)||(52988811-52988936)
chr1 (6-98)||(20074937-20075029)
chr1 (6-137)||(31537186-31537317)
chr1 (6-98)||(20297451-20297543)
chr1 (6-137)||(37680119-37680250)
chr1 (6-415)||(20853671-20854080)
chr1 (44-372)||(21961135-21961463)
chr1 (6-96)||(18710455-18710545)
chr1 (8-372)||(20832854-20833218)
chr1 (6-334)||(16379133-16379461)
chr1 (286-399)||(31536924-31537037)
chr1 (286-413)||(52989091-52989218)
chr1 (286-369)||(38909783-38909866)
chr1 (286-369)||(48426223-48426306)
chr1 (21-254)||(21045196-21045429)
chr1 (6-83)||(21752086-21752163)
chr1 (6-254)||(24784929-24785177)
chr1 (286-369)||(20297733-20297816)
chr1 (286-333)||(37680399-37680446)
chr1 (6-83)||(17042258-17042335)
chr1 (6-83)||(21842251-21842328)
chr1 (286-369)||(20074666-20074749)
chr1 (6-83)||(16347838-16347915)
chr1 (6-83)||(51330735-51330812)
chr1 (32-260)||(22435799-22436027)
chr1 (6-213)||(22401631-22401838)
chr1 (13-83)||(21833348-21833418)
chr1 (6-64)||(33388291-33388349)
chr1 (6-83)||(21228799-21228876)
chr1 (6-83)||(22496499-22496576)
chr1 (6-83)||(41350911-41350988)
chr1 (6-83)||(20081619-20081696)
chr1 (7-83)||(19109408-19109484)
[»] scaffold1056 (1 HSPs)
scaffold1056 (8-397)||(1776-2164)
[»] scaffold0106 (1 HSPs)
scaffold0106 (5-399)||(34389-34783)
[»] scaffold0102 (2 HSPs)
scaffold0102 (8-398)||(42753-43143)
scaffold0102 (6-98)||(50504-50596)
[»] scaffold0054 (1 HSPs)
scaffold0054 (8-398)||(63378-63768)
[»] scaffold0751 (1 HSPs)
scaffold0751 (5-372)||(5233-5599)
[»] scaffold0420 (1 HSPs)
scaffold0420 (6-437)||(8667-9098)
[»] scaffold0108 (1 HSPs)
scaffold0108 (5-398)||(50157-50550)
[»] scaffold0067 (4 HSPs)
scaffold0067 (5-399)||(29676-30070)
scaffold0067 (6-372)||(49065-49431)
scaffold0067 (6-372)||(58099-58465)
scaffold0067 (6-372)||(64487-64853)
[»] scaffold1433 (1 HSPs)
scaffold1433 (6-415)||(1153-1562)
[»] scaffold0404 (1 HSPs)
scaffold0404 (6-415)||(7797-8206)
[»] scaffold0405 (1 HSPs)
scaffold0405 (8-399)||(5657-6048)
[»] scaffold0026 (1 HSPs)
scaffold0026 (32-399)||(51730-52097)
[»] scaffold0165 (1 HSPs)
scaffold0165 (5-212)||(12012-12219)
[»] scaffold0310 (1 HSPs)
scaffold0310 (9-399)||(11033-11423)
[»] scaffold0309 (1 HSPs)
scaffold0309 (5-221)||(12779-12995)
[»] scaffold0180 (1 HSPs)
scaffold0180 (242-372)||(30898-31028)
[»] scaffold0010 (5 HSPs)
scaffold0010 (6-372)||(39218-39584)
scaffold0010 (13-334)||(4975-5296)
scaffold0010 (6-83)||(14477-14554)
scaffold0010 (286-332)||(14757-14803)
scaffold0010 (287-333)||(180763-180809)
[»] scaffold0664 (1 HSPs)
scaffold0664 (6-437)||(7091-7522)
[»] scaffold0056 (1 HSPs)
scaffold0056 (8-371)||(769-1132)
[»] scaffold0100 (1 HSPs)
scaffold0100 (24-334)||(16532-16842)
[»] scaffold0034 (3 HSPs)
scaffold0034 (6-415)||(70425-70834)
scaffold0034 (6-399)||(1810-2203)
scaffold0034 (164-371)||(11792-11999)
[»] scaffold0058 (1 HSPs)
scaffold0058 (6-398)||(22175-22567)
[»] scaffold0029 (2 HSPs)
scaffold0029 (6-333)||(93818-94145)
scaffold0029 (6-88)||(115615-115697)
[»] scaffold0443 (2 HSPs)
scaffold0443 (6-137)||(11862-11993)
scaffold0443 (286-332)||(12130-12176)
[»] scaffold0243 (2 HSPs)
scaffold0243 (6-372)||(9657-10023)
scaffold0243 (6-83)||(24119-24196)
[»] scaffold0161 (1 HSPs)
scaffold0161 (218-370)||(36096-36245)
[»] scaffold0190 (2 HSPs)
scaffold0190 (8-152)||(30431-30575)
scaffold0190 (287-399)||(30184-30296)
[»] scaffold0156 (1 HSPs)
scaffold0156 (8-372)||(36994-37358)
[»] scaffold0041 (2 HSPs)
scaffold0041 (6-134)||(41788-41916)
scaffold0041 (286-369)||(42068-42151)
[»] scaffold0523 (4 HSPs)
scaffold0523 (75-398)||(5562-5885)
scaffold0523 (32-96)||(11904-11968)
scaffold0523 (8-80)||(2926-2998)
scaffold0523 (286-333)||(11667-11714)
[»] scaffold0088 (2 HSPs)
scaffold0088 (6-137)||(29987-30118)
scaffold0088 (295-331)||(30276-30312)
[»] scaffold1032 (1 HSPs)
scaffold1032 (6-428)||(644-1066)
[»] scaffold0001 (4 HSPs)
scaffold0001 (6-131)||(514479-514604)
scaffold0001 (286-372)||(514238-514324)
scaffold0001 (6-83)||(496073-496150)
scaffold0001 (6-59)||(441706-441759)
[»] scaffold2062 (1 HSPs)
scaffold2062 (9-372)||(757-1125)
[»] scaffold1288 (1 HSPs)
scaffold1288 (5-99)||(13-107)
[»] scaffold0708 (2 HSPs)
scaffold0708 (6-152)||(5250-5396)
scaffold0708 (295-399)||(5003-5107)
[»] scaffold0529 (1 HSPs)
scaffold0529 (8-334)||(5143-5469)
[»] scaffold0367 (1 HSPs)
scaffold0367 (6-372)||(8906-9272)
[»] scaffold0222 (3 HSPs)
scaffold0222 (6-128)||(616-738)
scaffold0222 (6-96)||(20867-20957)
scaffold0222 (286-398)||(21147-21259)
[»] scaffold0118 (2 HSPs)
scaffold0118 (6-131)||(514-639)
scaffold0118 (286-413)||(794-921)
[»] scaffold0035 (2 HSPs)
scaffold0035 (6-371)||(5858-6223)
scaffold0035 (1-155)||(41210-41364)
[»] scaffold0765 (1 HSPs)
scaffold0765 (6-137)||(6377-6508)
[»] scaffold0068 (2 HSPs)
scaffold0068 (7-98)||(67267-67358)
scaffold0068 (286-372)||(66993-67079)
[»] scaffold0203 (1 HSPs)
scaffold0203 (6-348)||(763-1105)
[»] scaffold0072 (2 HSPs)
scaffold0072 (6-96)||(54100-54190)
scaffold0072 (286-399)||(54380-54493)
[»] scaffold0074 (3 HSPs)
scaffold0074 (6-99)||(15176-15269)
scaffold0074 (13-188)||(6173-6348)
scaffold0074 (286-371)||(15405-15490)
[»] scaffold0023 (4 HSPs)
scaffold0023 (7-96)||(164562-164651)
scaffold0023 (6-85)||(47155-47234)
scaffold0023 (286-398)||(164260-164372)
scaffold0023 (6-57)||(30774-30825)
[»] scaffold1530 (2 HSPs)
scaffold1530 (6-94)||(636-724)
scaffold1530 (283-399)||(834-950)
[»] scaffold1426 (1 HSPs)
scaffold1426 (32-413)||(1451-1832)
[»] scaffold0293 (2 HSPs)
scaffold0293 (6-188)||(15463-15645)
scaffold0293 (287-334)||(15744-15791)
[»] scaffold0476 (3 HSPs)
scaffold0476 (6-99)||(703-796)
scaffold0476 (8-83)||(10841-10916)
scaffold0476 (286-372)||(430-516)
[»] scaffold0348 (3 HSPs)
scaffold0348 (6-99)||(5007-5100)
scaffold0348 (6-99)||(17642-17735)
scaffold0348 (286-398)||(17343-17455)
[»] scaffold0076 (2 HSPs)
scaffold0076 (6-99)||(53581-53674)
scaffold0076 (286-398)||(53282-53394)
[»] scaffold0009 (2 HSPs)
scaffold0009 (6-99)||(251675-251768)
scaffold0009 (16-83)||(230026-230093)
[»] scaffold0167 (2 HSPs)
scaffold0167 (6-86)||(1173-1253)
scaffold0167 (258-399)||(5358-5499)
[»] scaffold0053 (2 HSPs)
scaffold0053 (6-334)||(65221-65549)
scaffold0053 (79-398)||(62631-62950)
[»] scaffold1517 (2 HSPs)
scaffold1517 (37-128)||(1616-1707)
scaffold1517 (287-413)||(1331-1457)
[»] scaffold0266 (1 HSPs)
scaffold0266 (77-372)||(16761-17056)
[»] scaffold1299 (1 HSPs)
scaffold1299 (6-96)||(2009-2099)
[»] scaffold0706 (2 HSPs)
scaffold0706 (6-96)||(5370-5460)
scaffold0706 (258-399)||(5067-5208)
[»] scaffold0298 (1 HSPs)
scaffold0298 (6-96)||(9388-9478)
[»] scaffold0282 (2 HSPs)
scaffold0282 (14-188)||(13548-13722)
scaffold0282 (287-336)||(13395-13444)
[»] scaffold0005 (1 HSPs)
scaffold0005 (6-136)||(263279-263409)
[»] scaffold0003 (2 HSPs)
scaffold0003 (6-136)||(203434-203564)
scaffold0003 (7-83)||(424362-424438)
[»] scaffold1373 (1 HSPs)
scaffold1373 (6-90)||(1-85)
[»] scaffold0239 (1 HSPs)
scaffold0239 (6-86)||(9957-10037)
[»] scaffold0261 (2 HSPs)
scaffold0261 (5-103)||(12502-12600)
scaffold0261 (5-103)||(20682-20780)
[»] scaffold0235 (2 HSPs)
scaffold0235 (6-372)||(8347-8713)
scaffold0235 (6-372)||(18561-18927)
[»] scaffold0139 (1 HSPs)
scaffold0139 (6-96)||(19130-19220)
[»] scaffold0317 (1 HSPs)
scaffold0317 (286-399)||(2964-3077)
[»] scaffold0114 (3 HSPs)
scaffold0114 (6-98)||(40111-40203)
scaffold0114 (9-113)||(17493-17597)
scaffold0114 (286-398)||(40391-40503)
[»] scaffold2165 (2 HSPs)
scaffold2165 (40-98)||(962-1020)
scaffold2165 (286-372)||(688-774)
[»] scaffold0011 (6 HSPs)
scaffold0011 (6-96)||(151620-151710)
scaffold0011 (6-413)||(23377-23784)
scaffold0011 (258-372)||(153797-153911)
scaffold0011 (13-62)||(73792-73841)
scaffold0011 (13-62)||(78173-78222)
scaffold0011 (10-62)||(175708-175760)
[»] scaffold1845 (1 HSPs)
scaffold1845 (286-413)||(1148-1275)
[»] scaffold0012 (2 HSPs)
scaffold0012 (8-188)||(216489-216669)
scaffold0012 (287-334)||(216343-216390)
[»] scaffold0040 (3 HSPs)
scaffold0040 (5-80)||(17930-18005)
scaffold0040 (6-83)||(111081-111158)
scaffold0040 (287-334)||(18179-18226)
[»] scaffold0148 (1 HSPs)
scaffold0148 (1-98)||(2047-2144)
[»] scaffold0146 (1 HSPs)
scaffold0146 (258-415)||(126-283)
[»] scaffold0017 (4 HSPs)
scaffold0017 (286-415)||(4295-4424)
scaffold0017 (6-83)||(17240-17317)
scaffold0017 (8-136)||(24361-24489)
scaffold0017 (6-98)||(194997-195089)
[»] scaffold0018 (2 HSPs)
scaffold0018 (6-337)||(9271-9602)
scaffold0018 (6-98)||(23457-23549)
[»] scaffold0605 (1 HSPs)
scaffold0605 (37-95)||(1364-1422)
[»] scaffold0507 (1 HSPs)
scaffold0507 (6-188)||(11081-11263)
[»] scaffold0079 (1 HSPs)
scaffold0079 (6-83)||(36551-36628)
[»] scaffold0276 (1 HSPs)
scaffold0276 (286-369)||(23811-23894)
[»] scaffold0434 (1 HSPs)
scaffold0434 (286-372)||(5787-5873)
[»] scaffold0031 (2 HSPs)
scaffold0031 (8-70)||(110665-110727)
scaffold0031 (286-372)||(115957-116043)
[»] scaffold0621 (2 HSPs)
scaffold0621 (6-83)||(70-147)
scaffold0621 (6-83)||(4487-4564)
[»] scaffold0207 (1 HSPs)
scaffold0207 (6-83)||(7913-7990)
[»] scaffold0120 (3 HSPs)
scaffold0120 (6-83)||(11317-11394)
scaffold0120 (6-62)||(14137-14193)
scaffold0120 (17-62)||(25242-25287)
[»] scaffold0022 (2 HSPs)
scaffold0022 (6-83)||(41685-41762)
scaffold0022 (6-83)||(75405-75482)
[»] scaffold0342 (1 HSPs)
scaffold0342 (13-213)||(14310-14510)
[»] scaffold0077 (1 HSPs)
scaffold0077 (8-200)||(57671-57863)
[»] scaffold0412 (1 HSPs)
scaffold0412 (6-125)||(15711-15830)
[»] scaffold0278 (1 HSPs)
scaffold0278 (6-213)||(3604-3811)
[»] scaffold0550 (1 HSPs)
scaffold0550 (6-83)||(10332-10409)
[»] scaffold0411 (1 HSPs)
scaffold0411 (6-83)||(8463-8540)
[»] scaffold0181 (1 HSPs)
scaffold0181 (6-83)||(29102-29179)
[»] scaffold0084 (1 HSPs)
scaffold0084 (6-83)||(8276-8353)
[»] scaffold0075 (1 HSPs)
scaffold0075 (6-83)||(55644-55721)
[»] scaffold0055 (1 HSPs)
scaffold0055 (6-83)||(22300-22377)
[»] scaffold0052 (1 HSPs)
scaffold0052 (6-83)||(7289-7366)
[»] scaffold0044 (2 HSPs)
scaffold0044 (6-83)||(3477-3554)
scaffold0044 (6-83)||(17213-17290)
[»] scaffold0331 (1 HSPs)
scaffold0331 (6-98)||(15138-15230)
[»] scaffold0080 (3 HSPs)
scaffold0080 (6-82)||(31936-32012)
scaffold0080 (6-82)||(37402-37478)
scaffold0080 (6-83)||(54690-54767)
[»] scaffold1600 (1 HSPs)
scaffold1600 (287-334)||(405-452)
[»] scaffold0679 (1 HSPs)
scaffold0679 (121-188)||(1092-1159)
[»] scaffold0410 (1 HSPs)
scaffold0410 (13-80)||(201-268)
[»] scaffold0270 (2 HSPs)
scaffold0270 (6-333)||(6926-7253)
scaffold0270 (6-333)||(14056-14383)
[»] scaffold0188 (1 HSPs)
scaffold0188 (292-399)||(33230-33337)
[»] scaffold0098 (1 HSPs)
scaffold0098 (121-184)||(25640-25703)
[»] scaffold0042 (2 HSPs)
scaffold0042 (6-57)||(37020-37071)
scaffold0042 (8-188)||(26407-26587)
[»] scaffold0993 (1 HSPs)
scaffold0993 (6-64)||(1035-1093)
[»] scaffold0490 (1 HSPs)
scaffold0490 (304-398)||(3216-3310)
[»] scaffold0305 (1 HSPs)
scaffold0305 (13-83)||(2924-2994)
[»] scaffold0028 (3 HSPs)
scaffold0028 (7-81)||(17991-18065)
scaffold0028 (7-83)||(11523-11599)
scaffold0028 (7-83)||(55058-55134)
[»] scaffold2059 (1 HSPs)
scaffold2059 (6-83)||(943-1020)
[»] scaffold1423 (1 HSPs)
scaffold1423 (6-83)||(552-629)
[»] scaffold0575 (1 HSPs)
scaffold0575 (8-61)||(4638-4691)
[»] scaffold0431 (1 HSPs)
scaffold0431 (6-83)||(10421-10498)
[»] scaffold0333 (1 HSPs)
scaffold0333 (6-83)||(18703-18780)
[»] scaffold0324 (2 HSPs)
scaffold0324 (6-83)||(2042-2119)
scaffold0324 (287-345)||(2323-2381)
[»] scaffold0259 (1 HSPs)
scaffold0259 (6-83)||(8311-8388)
[»] scaffold0122 (1 HSPs)
scaffold0122 (6-83)||(40681-40758)
[»] scaffold0109 (1 HSPs)
scaffold0109 (6-83)||(13298-13375)
[»] scaffold0162 (1 HSPs)
scaffold0162 (22-62)||(15979-16019)
[»] scaffold0112 (1 HSPs)
scaffold0112 (10-62)||(3556-3608)
[»] scaffold0007 (1 HSPs)
scaffold0007 (7-83)||(48719-48795)
[»] scaffold1459 (1 HSPs)
scaffold1459 (26-113)||(1176-1263)
[»] scaffold0423 (1 HSPs)
scaffold0423 (6-113)||(2407-2514)
[»] scaffold0273 (1 HSPs)
scaffold0273 (6-57)||(93-144)
[»] scaffold0177 (1 HSPs)
scaffold0177 (6-80)||(11533-11607)
[»] scaffold0006 (2 HSPs)
scaffold0006 (6-80)||(104280-104354)
scaffold0006 (288-333)||(104561-104606)
[»] scaffold0467 (1 HSPs)
scaffold0467 (17-86)||(13502-13571)
[»] scaffold0403 (1 HSPs)
scaffold0403 (6-83)||(14964-15041)
[»] scaffold0081 (2 HSPs)
scaffold0081 (6-83)||(21657-21734)
scaffold0081 (6-83)||(37081-37158)
[»] scaffold0819 (1 HSPs)
scaffold0819 (145-213)||(306-374)
[»] scaffold0008 (1 HSPs)
scaffold0008 (286-334)||(139533-139581)


Alignment Details
Target: chr6 (Bit Score: 331; Significance: 0; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 331; E-Value: 0
Query Start/End: Original strand, 5 - 435
Target Start/End: Complemental strand, 19486688 - 19486258
Alignment:
Q  5 cagcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgt 104  Q
    |||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  19486688 cagcaatgaaacaatgtgtagcaccagtatcaataataacaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaaatgt 19486589  T
Q  105 atgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaa 204  Q
     || ||||| | ||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19486588 ttgcgtaccagtcaatgcaaacaactttccacctgcctgagccttcttaggcttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaa 19486489  T
Q  205 acaatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccct 304  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||| |||||||||||||||||||    
T  19486488 acaatatcaccatgcttgcattccgctatcgtatgccctttcttcccacatcggaagcacttcttctcatcaccattgcaaacattactcttgtggccct 19486389  T
Q  305 tctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcaggaccatt 404  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| | ||||| |||||||||||||||||| || |    
T  19486388 tctcaccacacttgtagcaaacaatctcagtaggaacatctcttctcttaggtctcctctcatcattcaatctttgcttccctttgtcagcaggagcact 19486289  T
Q  405 gtagggcttcgaacaaccttgctggcctttg 435  Q
    |||||||||||||| ||||||||||||||||    
T  19486288 gtagggcttcgaacgaccttgctggcctttg 19486258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 8 - 372
Target Start/End: Original strand, 21474490 - 21474854
Alignment:
Q  8 caatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatg 107  Q
    |||| |||||||| ||| ||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||   || ||    
T  21474490 caatcaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaaatacctctgataagtcggtcctcattagaagtttg 21474589  T
Q  108 tgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaaca 207  Q
     ||||| | ||| ||||||||||| ||||||||| ||||||||||||| ||||||||||| ||||||| |||||| ||||| ||||||||| |||| |||    
T  21474590 cgtaccagtcaaagcaaacaccttgccacctgtcagagccttcttaggtttcctgcactgagaactaatatgaccctcttcatcacaattgtagcacaca 21474689  T
Q  208 atatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttct 307  Q
    |||||||| |||||||| || || |  || || ||||||||||||||| |||| ||||| |||||||||   |  || ||||||||||||||||| || |    
T  21474690 atatcaccacgcttgcactcagccaatgtgtgtcctttcttcccacatcggaaacacttcttctcatcacggtcacatacattactcttgtggccttttt 21474789  T
Q  308 caccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattc 372  Q
    ||||||||||| | |||||||||||||||||  ||||||| ||| |||| ||||| |||||||||    
T  21474790 caccacacttgaaacaaacaatctcagtaggagcatctctcctcctaggcctcctctcatcattc 21474854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 8 - 399
Target Start/End: Original strand, 25770734 - 25771125
Alignment:
Q  8 caatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatg 107  Q
    |||||||||||||  || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||    
T  25770734 caatgaaacaatgaatagcaccaatatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtccttattaacagtttg 25770833  T
Q  108 tgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaaca 207  Q
      |||  | ||| | ||||||||| ||||||||| ||||||||||||| ||||||||||| || |||| |||||||||||| ||||||||| |||| |||    
T  25770834 cttactagtcaaaggaaacaccttgccacctgtcagagccttcttaggtttcctgcactgagagctaatatgaccttcttcatcacaattgtagcacaca 25770933  T
Q  208 atatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttct 307  Q
    |||||||| |||||||| || | ||  || || |||||| |||||||| | || ||||| |||||||||   |  || | |||| |||||||||| || |    
T  25770934 atatcaccacgcttgcaatcagataatgtgtgtcctttcgtcccacatcgaaaacacttcttctcatcacggtcacataaattattcttgtggccttttt 25771033  T
Q  308 caccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcagga 399  Q
    ||||||||||| | || ||||||||||||||  ||||||| |||||||| ||||| |||||||||   || ||||| |||||||||||||||    
T  25771034 caccacacttgaaacagacaatctcagtaggagcatctctcctcttaggcctcctctcatcattcagcctctgtttacctttgtcagcagga 25771125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 141 - 425
Target Start/End: Original strand, 16813663 - 16813947
Alignment:
Q  141 ctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaacaatatcaccgcgcttgcattccgctatcgtatgc 240  Q
    |||| |||||||||| ||| ||||||| ||| |||||||||||||||| ||||||||||| |||||||||||||| ||||||||||| ||||| || |||    
T  16813663 ctgacccttcttaggcttcttgcactgtgaagtaagatgaccttcttcatcacaattgaaacaaacaatatcaccacgcttgcattcagctattgtgtgc 16813762  T
Q  241 cctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggca 340  Q
    | ||||||||||||| |||||||||| ||||| ||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| |||      
T  16813763 catttcttcccacatcggaagcacttcttctcctcaccattgcaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcagcaggat 16813862  T
Q  341 catctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcaggaccattgtagggcttcgaacaaccttg 425  Q
    ||||||| |||||||||||||| ||||||||| | || |||| ||||||||   ||||| || ||||||| |||| || ||||||    
T  16813863 catctctcctcttaggtctcctctcatcattcaatctctgttcccctttgtttacaggagcactgtagggtttcggacgaccttg 16813947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 211 - 425
Target Start/End: Complemental strand, 8720893 - 8720679
Alignment:
Q  211 tcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttctcac 310  Q
    ||||| ||||||||||| ||||| ||||||||||||||||||||| |||||||||| ||||| ||| ||||||| ||||||||||||||||| |||||||    
T  8720893 tcaccacgcttgcattcagctattgtatgccctttcttcccacatcggaagcacttcttctcctcaccattgcaaacattactcttgtggcctttctcac 8720794  T
Q  311 cacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcaggaccattgtaggg 410  Q
    |||||||||||||||||||||||  |||  ||||||| |||||||| ||||| ||||||||| | ||  ||| ||||||||   ||||| || |||||||    
T  8720793 cacacttgtagcaaacaatctcatcaggatcatctctcctcttaggcctcctctcatcattcaatctaggttcccctttgtttacaggagcactgtaggg 8720694  T
Q  411 cttcgaacaaccttg 425  Q
     |||| || ||||||    
T  8720693 tttcggacgaccttg 8720679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 121 - 370
Target Start/End: Complemental strand, 25959031 - 25958782
Alignment:
Q  121 gcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaacaatatcaccgcgct 220  Q
    ||||||||  ||||||||| ||||| ||||||||| ||| |||||||||||| ||  || |||||||| |  || ||||| || || |||||  |  |||    
T  25959031 gcaaacactcttccacctgcctgaggcttcttaggcttcttgcactgcgaaccaatgtgtccttcttcattgcagttgaaacacactatatcttcatgct 25958932  T
Q  221 tgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttctcaccacacttgta 320  Q
    | ||||||||||||  |||||| ||| |||||||| |||||||||| ||||| ||| ||||||||| ||||||| ||||||| |||| ||||||| ||||    
T  25958931 tacattccgctatcagatgccccttcctcccacatcggaagcacttcttctcctcaccattgcagaaattactcctgtggcctttcttaccacacctgta 25958832  T
Q  321 gcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcat 370  Q
    ||||||||||||||||||  ||||||| |||||||||||||| |||||||    
T  25958831 gcaaacaatctcagtaggagcatctctactcttaggtctcctctcatcat 25958782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 6 - 399
Target Start/End: Original strand, 19455911 - 19456304
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    |||||| ||   ||     
T  19455911 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagaaaatcctcaatagtggtt 19456010  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    || ||||| | ||  |||||||| || ||||| |||  | ||||||| || |   | |||| |||||||| ||||||||| ||||  || ||  ||||||    
T  19456011 tgcgtaccagtcagagcaaacactttaccaccggtcctaaccttctttggttgagtacactacgaactaatatgaccttcctcgttgcagttatagcaaa 19456110  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    |||| || || ||||| || ||  |||  || || |||||||  |  ||   ||||||||| ||||||||   ||  |||||||||||||||||||| ||    
T  19456111 caatgtctccacgcttacaatcatctagtgtgtgtcctttctgacaccacctgaagcacttcttctcatctctatcacagacattactcttgtggccttt 19456210  T
Q  306 ctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcagga 399  Q
     |||||||||||| |||||||||||||||||||   |||||| ||||| || ||||| |||||||||   |||||||| |||||||||||||||    
T  19456211 ttcaccacacttgaagcaaacaatctcagtaggagtatctctcctcttgggcctcctctcatcattcagcctttgttttcctttgtcagcagga 19456304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 6 - 399
Target Start/End: Original strand, 19466056 - 19466449
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    |||||| ||   ||     
T  19466056 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagaaaatcctcaatagtggtt 19466155  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    || ||||| | ||  |||||||| || ||||| |||  | ||||||| || |   | |||| |||||||| ||||||||| ||||  || ||  ||||||    
T  19466156 tgcgtaccagtcagagcaaacactttaccaccggtcctaaccttctttggttgagtacactacgaactaatatgaccttcctcgttgcagttatagcaaa 19466255  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    |||| || || ||||| || ||  |||  || || |||||||  |  ||   ||||||||| ||||||||   ||  |||||||||||||||||||| ||    
T  19466256 caatgtctccacgcttacaatcatctagtgtgtgtcctttctgacaccacctgaagcacttcttctcatctctatcacagacattactcttgtggccttt 19466355  T
Q  306 ctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcagga 399  Q
     |||||||||||| |||||||||||||||||||   |||||| ||||| || ||||| |||||||||   |||||||| |||||||||||||||    
T  19466356 ttcaccacacttgaagcaaacaatctcagtaggagtatctctcctcttgggcctcctctcatcattcagcctttgttttcctttgtcagcagga 19466449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 6 - 399
Target Start/End: Complemental strand, 14377309 - 14376916
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||||||||| | || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||   ||     
T  14377309 agcaatgaaacaatgagtaacaccagtgtctataatagcaattaaaggattactattaaagaaacaagtacctctgataagtcggtcctcactagtagtc 14377210  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    || ||||| | |||||||||||| |||||||| ||   | ||||||| || |   | || |||||||| |  || || ||||| |  || ||  | ||||    
T  14377209 tgcgtaccagtcaatgcaaacacttttccaccggttctaaccttcttcggctgtgtacattgcgaactgatgtggccctcttcattgcagttataacaaa 14377110  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    ||| |||||| ||||| || |  ||||  || || |||||||  |||||   ||||||||| ||||||||   | | || ||||||||||||||||| ||    
T  14377109 caacatcaccacgcttacaattagctaaagtgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaacattactcttgtggccttt 14377010  T
Q  306 ctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcagga 399  Q
    |||||| ||||||||||||||||  |||  |||  ||||||| || || |||||||| ||||||||| | || ||||| || ||||||||||||    
T  14377009 ctcaccgcacttgtagcaaacaacatcaacaggagcatctctcctattgggtctcctctcatcattcaacctctgttttcccttgtcagcagga 14376916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 1 - 334
Target Start/End: Complemental strand, 30678422 - 30678089
Alignment:
Q  1 tcagcagcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaa 100  Q
    |||| |||||| |||||| | ||| ||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |  || |||||||| |    
T  30678422 tcagtagcaataaaacaacgcgtagcacaaatatcaataatagcaattaaagaagtactattaaagaaacatgtacctctgatcaaccgatcctcattca 30678323  T
Q  101 ctgtatgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaa 200  Q
    |||| |||||||| | ||| ||||||   || ||||  | ||||||||||||||| ||| |||||||||||| ||  ||||||||||| | ||| |||||    
T  30678322 ctgtttgtgtaccagtcaaagcaaacgttttcccactagcctgagccttcttaggcttcttgcactgcgaaccaatgtgaccttcttcattacagttgaa 30678223  T
Q  201 gcaaacaatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtgg 300  Q
     || |  |||||| |  ||||||| || |  ||  | ||||||||||| |||||    || |||  |||| ||||| ||   || |||||||||||||||    
T  30678222 acacatcatatcatcatgcttgcactctgtaataatttgccctttcttaccacaacaaaaacaccgtttcgcatcaccaagacaaacattactcttgtgg 30678123  T
Q  301 cccttctcaccacacttgtagcaaacaatctcag 334  Q
    | |||||||||||||||||||||||||| |||||    
T  30678122 ctcttctcaccacacttgtagcaaacaacctcag 30678089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 6 - 333
Target Start/End: Original strand, 24367288 - 24367615
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| |||||||| ||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||     
T  24367288 agcaataaaacaatgagtagcaccagtattaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaggagtc 24367387  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    || ||||| | ||| ||||||||||| ||||| ||   ||  ||||| || |    |||||| ||||||| |||||||||| | |  |||||| | || |    
T  24367388 tgcgtaccagtcaaagcaaacaccttcccaccagttctagttttcttcggttcagggcactgtgaactaatatgaccttctccattgcaattgtaacaga 24367487  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    |||| || || ||||||||||| ||||   | || || ||||  |||||   |||||||||  | |||||       || ||||||||||||||||| ||    
T  24367488 caatgtccccccgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggccttt 24367587  T
Q  306 ctcaccacacttgtagcaaacaatctca 333  Q
    ||||||||||||||||||||||||||||    
T  24367588 ctcaccacacttgtagcaaacaatctca 24367615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 6 - 399
Target Start/End: Original strand, 18797578 - 18797971
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||   ||     
T  18797578 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctcactagtagtc 18797677  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    || ||||| | |||||||||||| || ||||| ||   | ||||||| || |   ||||||| ||||| | ||| ||||| || |  || ||  ||||||    
T  18797678 tgcgtaccagtcaatgcaaacactttcccaccggttctaaccttctttggttgagtgcactgtgaactgatatggccttcatcattgcagttatagcaaa 18797777  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    |||  ||||| |||||||| || ||||  || || || ||||  |||||   ||| || || | ||||||   | |||| ||||||||||||||||| ||    
T  18797778 caacgtcaccacgcttgcaatcagctagagtgtgtcccttctgaccacacctgaaacatttctgctcatctttagtgcaaacattactcttgtggccttt 18797877  T
Q  306 ctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcagga 399  Q
    ||| |||||||| || |||||||| ||   |||  |||| || ||||| || ||||| ||||||||| | ||||| || || ||||||||||||    
T  18797878 ctcgccacacttataacaaacaatatccacaggagcatccctcctcttgggcctcctctcatcattcaatctttgctttcccttgtcagcagga 18797971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 6 - 371
Target Start/End: Original strand, 19437890 - 19438255
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||   ||     
T  19437890 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatccttactagtggtt 19437989  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    || ||||| | ||  ||||||||||| ||||  |||  | ||||||| || |   ||||||||||||| | ||| |  |||||||  || ||  | || |    
T  19437990 tgcgtaccagtcagagcaaacaccttaccactagtcctaaccttcttcggctgtgtgcactgcgaactgatatggcgctcttcgttgcagttataacata 19438089  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    ||| |||||| |||||||| || ||||  || || |||||||  |||||   ||| ||||| ||||||||   | | || |||||||||  |||||| ||    
T  19438090 caacatcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttattctcatctttagtacaaacattactcaagtggccttt 19438189  T
Q  306 ctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcatt 371  Q
    ||||||||||||||| | ||| ||||||| |||  ||||||| ||||| || ||||| ||||||||    
T  19438190 ctcaccacacttgtaacgaacgatctcagcaggagcatctctcctcttgggcctcctctcatcatt 19438255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 6 - 98
Target Start/End: Original strand, 15462224 - 15462316
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatt 98  Q
    ||||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15462224 agcaatgaaacaatgtgtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctcatt 15462316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 6 - 98
Target Start/End: Complemental strand, 10466241 - 10466149
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatt 98  Q
    |||||| |||||||| ||| || || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10466241 agcaataaaacaatgagtagcaacagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatt 10466149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 24515805 - 24515717
Alignment:
Q  8 caatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctca 96  Q
    ||||||||||||| ||| ||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  24515805 caatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctca 24515717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 6 - 137
Target Start/End: Complemental strand, 34642979 - 34642848
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||||||| ||||| | || |||||||| ||||||||  |||||||||||||||||||||||||||||||||  || |||||  | ||     
T  34642979 agcaatgaaacaatgtgtagcaccagtgtctataatagcgattaaagggatactattaaagaaacaagtacctctgataagtctatcttcattcgcggtt 34642880  T
Q  106 tgtgtacctgccaatgcaaacacctttccacc 137  Q
    || ||||| ||||| |||||||| || |||||    
T  34642879 tgcgtaccagccaaggcaaacactttcccacc 34642848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 17 - 113
Target Start/End: Complemental strand, 18182749 - 18182653
Alignment:
Q  17 aatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatgtgtacc 113  Q
    |||||||| |||||||||||||||||||||||||||||||||||| |||| |||| |||||||| || |   | ||||||||| |||| ||||||||    
T  18182749 aatgtgtagcaccaatatcaataatagcaattaaaggagtactatcaaagtaacatgtacctctaatcaaatgatcctcattatctgtctgtgtacc 18182653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 16925033 - 16924956
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||||||| ||||| ||||||||||||||| |||||||||| ||||||   ||||||||||||||||    
T  16925033 agcaataaaacaatgtgtagcaccagtatcaataatagcaactaaaggagtattattaatataacaagtacctctgat 16924956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 21567384 - 21567304
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataag 86  Q
    ||||||||||||||| |||  |||| | || |||||||||||| ||  |||||||||||||||||||||||||||||||||    
T  21567384 agcaatgaaacaatgagtagtaccagtgtctataatagcaattgaataagtactattaaagaaacaagtacctctgataag 21567304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 254
Target Start/End: Complemental strand, 23085216 - 23084970
Alignment:
Q  8 caatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatg 107  Q
    |||| |||||||||||| ||||| | |||||||||| || |||||||||||||| |||  |||| |||||||| || | ||||||||||||  |||| ||    
T  23085216 caataaaacaatgtgtagcaccagtttcaataatagaaactaaaggagtactatcaaaataacatgtacctctaatcaatcggtcctcattctctgtctg 23085117  T
Q  108 tgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaaca 207  Q
      |||  | ||| ||||||||  |||||   ||||| |||||| |||| ||| |||||||||||| || |||| | ||||| |  ||||| || || |||    
T  23085116 catactagtcaaagcaaacactcttccagtagtctgcgccttcataggcttcttgcactgcgaaccaatatgaacctcttcatttcaattaaaacacaca 23085017  T
Q  208 atatcaccgcgcttgcattccgctatcgtatgccctttcttcccaca 254  Q
    | |||| |  |||| ||||| |  || |||||||||||||| |||||    
T  23085016 acatcatcatgcttacattctgtaatagtatgccctttcttaccaca 23084970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 5836621 - 5836544
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||||||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  5836621 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 5836544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 287 - 372
Target Start/End: Complemental strand, 10465960 - 10465875
Alignment:
Q  287 cattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattc 372  Q
    |||| ||||||||||| || |||||||||||||| || |||||||||| ||| |||||||| ||||| || ||||| |||||||||    
T  10465960 cattgctcttgtggcctttttcaccacacttgtaacagacaatctcagcaggaacatctctcctcttgggcctcctatcatcattc 10465875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 23081311 - 23081388
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||||||| ||||| ||||||||||||||| |||||| ||||||| |||  |||| |||||||||||    
T  23081311 agcaataaaacaatgtgtagcaccagtatcaataatagcaactaaaggtgtactatcaaaataacatgtacctctgat 23081388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 286 - 399
Target Start/End: Complemental strand, 24515527 - 24515414
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttcc 385  Q
    ||||||||||||||||| |||||||||||||| || |||||||| |||  |||  ||||||| ||||| || ||||| |||||||||   || ||||| |    
T  24515527 acattactcttgtggcctttctcaccacacttataacaaacaatatcaacaggagcatctctcctcttgggcctcctctcatcattcagcctctgttttc 24515428  T
Q  386 ctttgtcagcagga 399  Q
    | ||||||||||||    
T  24515427 ccttgtcagcagga 24515414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 2872195 - 2872118
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  2872195 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 2872118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 16574778 - 16574855
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  16574778 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 16574855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 16620602 - 16620525
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  16620602 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 16620525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 29589832 - 29589755
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  29589832 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 29589755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 80
Target Start/End: Original strand, 27190324 - 27190398
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctct 80  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | |||||||||||    
T  27190324 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctct 27190398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 27258916 - 27258842
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctct 80  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | |||||||||||    
T  27258916 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctct 27258842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 18405337 - 18405260
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| ||||||||  || ||||| ||||||||||||||  |||||| ||||||| |||  ||||||||||||||||    
T  18405337 agcaataaaacaatgcatagcaccagtatcaataatagcagctaaaggtgtactatcaaaataacaagtacctctgat 18405260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 25115440 - 25115517
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| || ||||| |||  |||||||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  25115440 agcaataaagcaatgcgtagtaccaatatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 25115517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 27559362 - 27559285
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| |||||||||||||||  || |||||| ||||||   ||||||||||||||||    
T  27559362 agcaataaaacaatgcgtagcaccattatcaataatagcaacaaatggagtattattaatataacaagtacctctgat 27559285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 28312518 - 28312595
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| || ||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  28312518 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 28312595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 18401549 - 18401589
Alignment:
Q  22 gtaacaccaatatcaataatagcaattaaaggagtactatt 62  Q
    |||||||||||||||||||| ||||| ||||||||||||||    
T  18401549 gtaacaccaatatcaataattgcaatcaaaggagtactatt 18401589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 6 - 98
Target Start/End: Original strand, 22436757 - 22436849
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatt 98  Q
    |||||| |||||||| ||| ||| | ||||||||||||||| |||||||||| ||| ||   |||| ||||||||||| |  |||||||||||    
T  22436757 agcaataaaacaatgcgtagcactagtatcaataatagcaactaaaggagtattatcaatataacatgtacctctgatcaagcggtcctcatt 22436849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 15462499 - 15462538
Alignment:
Q  281 tgcagacattactcttgtggcccttctcaccacacttgta 320  Q
    |||||||||||||||||||||| ||| |||||||||||||    
T  15462499 tgcagacattactcttgtggcctttcgcaccacacttgta 15462538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 22829769 - 22829702
Alignment:
Q  16 caatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    ||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  22829769 caatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 22829702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 16100914 - 16100959
Alignment:
Q  17 aatgtgtaacaccaatatcaataatagcaattaaaggagtactatt 62  Q
    |||| ||| |||||||||||||||| ||||| ||||||||||||||    
T  16100914 aatgagtagcaccaatatcaataattgcaatcaaaggagtactatt 16100959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 24293155 - 24293098
Alignment:
Q  26 caccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  24293155 caccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 24293098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 28260590 - 28260513
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| || ||||| ||| ||||| ||||||||||||||| |||||| ||| ||||||   | ||||||||||||||    
T  28260590 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggggtattattaatatagcaagtacctctgat 28260513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 28285326 - 28285403
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| || ||||| ||| ||||| ||||||||||||||| |||||| ||| ||||||   | ||||||||||||||    
T  28285326 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggggtattattaatatagcaagtacctctgat 28285403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 28339339 - 28339262
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| || ||||| ||| ||||| ||||||||||||||| |||||| ||| ||||||   | ||||||||||||||    
T  28339339 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggggtattattaatatagcaagtacctctgat 28339262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 327; Significance: 0; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 5 - 435
Target Start/End: Original strand, 20391175 - 20391605
Alignment:
Q  5 cagcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgt 104  Q
    |||||||||| ||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20391175 cagcaatgaatcaatgtgtagcaccagtatcaataatagaaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgt 20391274  T
Q  105 atgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaa 204  Q
     || ||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20391275 ctgcgtaccagtcaatgcaaacacctttccacctgtctgagccttcttaggcttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaa 20391374  T
Q  205 acaatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccct 304  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||| | |||||||||||||||||||    
T  20391375 acaatatcaccacgcttgcattccgctatagtatgccctttcttcccacatcggaagcactttttctcatcaccattggaaacattactcttgtggccct 20391474  T
Q  305 tctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcaggaccatt 404  Q
    |||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||| ||||||||| | |||||||||||||||||||||||| || |    
T  20391475 tctcaccacacttgtagcaaacaatctcagaaggaacatctctactcttaggtctcctctcatcattcaatctttgtttccctttgtcagcaggagcact 20391574  T
Q  405 gtagggcttcgaacaaccttgctggcctttg 435  Q
    ||||||||||| || ||||||||| ||||||    
T  20391575 gtagggcttcggacgaccttgctgacctttg 20391605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 121 - 428
Target Start/End: Complemental strand, 6607045 - 6606738
Alignment:
Q  121 gcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaacaatatcaccgcgct 220  Q
    ||||||||||| |||||||||  | |||||||||| |   | ||||| ||||| ||||| |||||||| ||||||||||||||||||||||| || ||||    
T  6607045 gcaaacaccttgccacctgtcctaaccttcttaggctgtgtacactgtgaactgagatgtccttcttcatcacaattgaagcaaacaatatccccacgct 6606946  T
Q  221 tgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttctcaccacacttgta 320  Q
    ||||||| |||||||||||||| ||||| |||||| |||||||||| ||||| ||| ||||||| |||||||||||||||||||||||||||||||||||    
T  6606945 tgcattcagctatcgtatgccccttctttccacatcggaagcacttcttctcctcaccattgcaaacattactcttgtggcccttctcaccacacttgta 6606846  T
Q  321 gcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcaggaccattgtagggcttcgaacaa 420  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||||| | ||||| |  ||| |||||  |||| || |||||||||||| ||      
T  6606845 gcaaacaatctcagtaggaacatctcttctcttaggtctcctctcatcattcaatctttgctctcctctgtcaataggaacactgtagggcttcggacgt 6606746  T
Q  421 ccttgctg 428  Q
    ||||||||    
T  6606745 ccttgctg 6606738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 8 - 398
Target Start/End: Original strand, 22373961 - 22374351
Alignment:
Q  8 caatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatg 107  Q
    ||||||||| ||| ||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  22373961 caatgaaactatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaacagtttg 22374060  T
Q  108 tgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaaca 207  Q
     ||||| | ||| ||||||||||| ||||||||  ||||||||||||| |||||||||||||| |||| |||||||||||| ||||||||  ||||||||    
T  22374061 ggtaccagtcaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagctaatatgaccttcttcatcacaattatagcaaaca 22374160  T
Q  208 atatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttct 307  Q
    |||||||| |||||||| || ||||  || || |||||||| |||||    || ||||| || ||||||   |  || ||||||||||||||| | || |    
T  22374161 atatcaccacgcttgcaatcagctaatgtgtgtcctttctttccacacctaaaacacttcttttcatcacggtcacatacattactcttgtggtcttttt 22374260  T
Q  308 caccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcagg 398  Q
    ||||||||||| | || ||||||||||||||   |||||| ||| |||| ||||| || |||||    |||||||| |||||| |||||||    
T  22374261 caccacacttgaaacagacaatctcagtaggagaatctctcctcctaggcctcctctcctcattaagtctttgtttacctttgacagcagg 22374351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 8 - 369
Target Start/End: Original strand, 19985272 - 19985633
Alignment:
Q  8 caatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatg 107  Q
    ||||||||||||| ||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || || ||    
T  19985272 caatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtccttattcacagtctg 19985371  T
Q  108 tgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaaca 207  Q
     ||||  | ||||||||| ||||| ||||||||| || |||||||||| ||| ||||||| || |||| ||| || ||||| ||||||||  ||||||||    
T  19985372 cgtactagtcaatgcaaataccttgccacctgtccgaaccttcttaggcttcttgcactgtgagctaatatgcccctcttcatcacaattatagcaaaca 19985471  T
Q  208 atatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttct 307  Q
    | ||| || | |||||| || ||||  || || | |||||  ||||||  |||  |||| |||||||||   |  || ||||||||||||||||  || |    
T  19985472 acatccccactcttgcaatcagctaatgtgtgtcatttctgtccacatctgaaatacttcttctcatcacggtcacatacattactcttgtggctttttt 19985571  T
Q  308 caccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatca 369  Q
    | ||||||||| | |||||||||||||||||  ||||||| |||||||| ||||| ||||||    
T  19985572 cgccacacttgaaacaaacaatctcagtaggagcatctctcctcttaggcctcctctcatca 19985633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 5 - 399
Target Start/End: Original strand, 21928517 - 21928911
Alignment:
Q  5 cagcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgt 104  Q
    |||||||||||||||| ||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||    
T  21928517 cagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcttcattcacagt 21928616  T
Q  105 atgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaa 204  Q
     ||  |||  | ||| ||||||||||| ||||||||| || ||||||| || ||| |||| || || |||| ||| || ||||| ||||||||  |||||    
T  21928617 ttgcttactagtcaaagcaaacaccttgccacctgtccgaaccttcttgggcttcttgcattgtgagctaatatgcccctcttcatcacaattatagcaa 21928716  T
Q  205 acaatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccct 304  Q
    || | |||||| |||||||| ||  | |  || || |||||||  ||||||  ||| ||||| ||||||||    |  |  |||||||||| ||||||||    
T  21928717 acgacatcaccacgcttgcaatcacccaaagtgtgtcctttctgtccacatctgaaacacttcttctcatctcggtcacttacattactctcgtggccct 21928816  T
Q  305 tctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcagga 399  Q
    | || ||||||||| | |||| ||||||||||||  ||||||| ||| |||| ||||| |||||||||   || ||||| |||||||||||||||    
T  21928817 tttcgccacacttgaaacaaagaatctcagtaggagcatctctcctcctaggcctcctctcatcattcagcctctgttttcctttgtcagcagga 21928911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 6 - 369
Target Start/End: Complemental strand, 16268915 - 16268552
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| |||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||     
T  16268915 agcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattggtagtc 16268816  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    || ||||| | ||| |||||||| |||||||| ||   ||||||||| || |     ||||| ||||| | |||||| ||| | |  |||||| |||| |    
T  16268815 tgcgtaccagtcaaagcaaacacttttccaccagttctagccttcttcggctcaggacactgtgaactgatatgaccctctccattgcaattgtagcaga 16268716  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    ||||||| || ||||||||||| ||||   |||| || ||||  |||||   |||||||||  |||||||   |   || ||||||||||||||||| ||    
T  16268715 caatatccccacgcttgcattcagctaggctatgacccttctgaccacacctgaagcacttcctctcatctttaccacaaacattactcttgtggccttt 16268616  T
Q  306 ctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatca 369  Q
    ||||||||||||||| ||||||||||||| |||  |||||||  ||||||| ||||| ||||||    
T  16268615 ctcaccacacttgtaacaaacaatctcagaaggagcatctctcttcttaggcctcctgtcatca 16268552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 6 - 137
Target Start/End: Complemental strand, 22027971 - 22027840
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||     
T  22027971 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattagtagtc 22027872  T
Q  106 tgtgtacctgccaatgcaaacacctttccacc 137  Q
    || ||||| | |||||||||||| ||||||||    
T  22027871 tgcgtaccggtcaatgcaaacacttttccacc 22027840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 6 - 232
Target Start/End: Complemental strand, 31414223 - 31413997
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||     
T  31414223 agcaatgaaacaatgagtagcaccaatatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattagtagtc 31414124  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    ||  |||| | |||||||||||| || ||||| ||   ||||||||| |  |   | ||||| ||||| | ||||||||||||||  || ||| ||||||    
T  31414123 tgcataccagtcaatgcaaacactttcccaccggttctagccttcttcgactgagtacactgtgaactgatatgaccttcttcgttgcagttgtagcaaa 31414024  T
Q  206 caatatcaccgcgcttgcattccgcta 232  Q
    |||| || || ||||| ||||| ||||    
T  31414023 caatgtccccacgcttacattcagcta 31413997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 6 - 137
Target Start/End: Original strand, 28984001 - 28984132
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| ||||| || ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||     
T  28984001 agcaataaaacagtgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaggagtc 28984100  T
Q  106 tgtgtacctgccaatgcaaacacctttccacc 137  Q
    |||||||| | ||  |||||||||||||||||    
T  28984101 tgtgtaccagtcagagcaaacacctttccacc 28984132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 6 - 137
Target Start/End: Original strand, 28989220 - 28989351
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| ||||| || ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||     
T  28989220 agcaataaaacagtgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaggagtc 28989319  T
Q  106 tgtgtacctgccaatgcaaacacctttccacc 137  Q
    |||||||| | ||  |||||||||||||||||    
T  28989320 tgtgtaccagtcagagcaaacacctttccacc 28989351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 6 - 98
Target Start/End: Complemental strand, 29301117 - 29301025
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatt 98  Q
    ||||||||||||||| ||| ||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29301117 agcaatgaaacaatgcgtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatt 29301025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 6 - 137
Target Start/End: Original strand, 22053953 - 22054084
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| ||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||   ||     
T  22053953 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagacggtcctcattagtagtc 22054052  T
Q  106 tgtgtacctgccaatgcaaacacctttccacc 137  Q
    || ||||| | ||| |||||||| ||||||||    
T  22054053 tgcgtaccagtcaaagcaaacacttttccacc 22054084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 22375143 - 22375071
Alignment:
Q  8 caatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctct 80  Q
    |||| |||||||||||| ||||| |||||||||||||||||||||||||||||| |||| |||| ||||||||    
T  22375143 caataaaacaatgtgtagcaccagtatcaataatagcaattaaaggagtactatcaaagtaacatgtacctct 22375071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 22421583 - 22421506
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||||||| ||||| ||||||||||||||  |||||| ||||||| |||  ||||||||||||||||    
T  22421583 agcaataaaacaatgtgtagcaccagtatcaataatagcagctaaaggtgtactatcaaaataacaagtacctctgat 22421506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 398
Target Start/End: Complemental strand, 22027691 - 22027579
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttcc 385  Q
    ||||||||||||||||| || || ||||||||||| ||||| ||||||| |||  ||||||| || || || ||||| ||||||||| | ||||| || |    
T  22027691 acattactcttgtggcctttatcgccacacttgtaacaaactatctcagcaggagcatctctcctattgggcctcctctcatcattcaatctttgctttc 22027592  T
Q  386 ctttgtcagcagg 398  Q
    | |||||||||||    
T  22027591 ccttgtcagcagg 22027579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 286 - 333
Target Start/End: Original strand, 28984281 - 28984328
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctca 333  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  28984281 acattactcttgtggcctttctcaccacacttgtaacaaacaatctca 28984328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 17671713 - 17671636
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  17671713 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 17671636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 19115490 - 19115567
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  19115490 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 19115567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 20015954 - 20015877
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  20015954 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 20015877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 22031193 - 22031270
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| || ||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   ||||||||||||||||    
T  22031193 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatataacaagtacctctgat 22031270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 22117866 - 22117789
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  22117866 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 22117789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 22126650 - 22126573
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  22126650 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 22126573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 22129308 - 22129231
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| || ||||||||||||||| ||||||||||||||| ||||| |||| ||||||   | ||||||||||||||    
T  22129308 agcaataaagcaatgtgtaacaccagtatcaataatagcaactaaagcagtattattaatctagcaagtacctctgat 22129231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 30310835 - 30310758
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| || ||||||||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  30310835 agcaataaagcaatgtgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 30310758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 32603235 - 32603312
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  32603235 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 32603312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 98
Target Start/End: Original strand, 19981057 - 19981149
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatt 98  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||| ||   |||| ||||||||||| || || ||||||||    
T  19981057 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattatcaatataacatgtacctctgatcagccgatcctcatt 19981149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 121 - 188
Target Start/End: Complemental strand, 21982518 - 21982451
Alignment:
Q  121 gcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttc 188  Q
    ||||| |||||  |||| ||||| ||||||||||| ||| ||||||||||||||| ||||||||||||    
T  21982518 gcaaaaaccttcacaccagtctgggccttcttaggcttcttgcactgcgaactaatatgaccttcttc 21982451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 121 - 188
Target Start/End: Complemental strand, 21999004 - 21998937
Alignment:
Q  121 gcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttc 188  Q
    ||||| |||||  |||| ||||| ||||||||||| ||| ||||||||||||||| ||||||||||||    
T  21999004 gcaaaaaccttcacaccagtctgggccttcttaggcttcttgcactgcgaactaatatgaccttcttc 21998937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 22523636 - 22523691
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactat 61  Q
    |||||| |||||||||||| ||||| ||||||||||||||| |||||| |||||||    
T  22523636 agcaataaaacaatgtgtagcaccagtatcaataatagcaactaaaggtgtactat 22523691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 188
Target Start/End: Complemental strand, 22245706 - 22245524
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| |||||||||||| ||| ||||| |||||||  ||||||||| ||||||| |||  |||| |||||||| || |  || ||||||||  ||||     
T  22245706 agcaataaaacaatgtgtagcactaatatgaataatataaattaaaggtgtactatcaaaataacatgtacctctaatcaaacgatcctcattctctgtt 22245607  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttc 188  Q
    || ||||| | ||| ||||||||  | ||||  || |||| ||||||||| ||| |||| || || | || ||||||||||||    
T  22245606 tgcgtaccagtcaaagcaaacactctaccactagtttgagtcttcttaggtttcttgcattgtgacccaatatgaccttcttc 22245524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 188
Target Start/End: Complemental strand, 22246124 - 22245942
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| |||||||||||| ||| ||||| |||||||  ||||||||| ||||||| |||  |||| |||||||| || |  || ||||||||  ||||     
T  22246124 agcaataaaacaatgtgtagcactaatatgaataatataaattaaaggtgtactatcaaaataacatgtacctctaatcaaacgatcctcattctctgtt 22246025  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttc 188  Q
    || ||||| | ||| ||||||||  | ||||  || |||| ||||||||| ||| |||| || || | || ||||||||||||    
T  22246024 tgcgtaccagtcaaagcaaacactctaccactagtttgagtcttcttaggtttcttgcattgtgacccaatatgaccttcttc 22245942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 18859667 - 18859744
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| || ||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  18859667 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 18859744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 19481763 - 19481686
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| || ||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  19481763 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 19481686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 213
Target Start/End: Complemental strand, 21391545 - 21391345
Alignment:
Q  13 aaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatgtgtac 112  Q
    |||||||| ||| ||||| ||||||||||||||| |||||| ||| ||| ||   | |||||||||||||| |  || ||||| ||  |||| |||||||    
T  21391545 aaacaatgcgtagcaccagtatcaataatagcaactaaaggtgtattatcaatatagcaagtacctctgatcaaacgatcctcgttctctgtctgtgtac 21391446  T
Q  113 ctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaacaatatc 212  Q
    | | ||| ||||| ||| | |||   ||| | ||||||||||| ||| ||||||  |||| ||  ||||| ||||| | |||||||||||| || |||||    
T  21391445 cagtcaaagcaaagaccctaccagtagtcggcgccttcttaggcttcttgcactatgaaccaatgtgaccctcttcattacaattgaagcatactatatc 21391346  T
Q  213 a 213  Q
    |    
T  21391345 a 21391345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 213
Target Start/End: Complemental strand, 21780871 - 21780671
Alignment:
Q  13 aaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatgtgtac 112  Q
    |||||||| ||| ||||| ||||||||||||||| |||||| ||| ||| ||   | |||||||||||||| |  || ||||| ||  |||| |||||||    
T  21780871 aaacaatgcgtagcaccagtatcaataatagcaactaaaggtgtattatcaatatagcaagtacctctgatcaaacgatcctcgttctctgtctgtgtac 21780772  T
Q  113 ctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaacaatatc 212  Q
    | | ||| ||||| ||| | |||   ||| | ||||||||||| ||| ||||||  |||| ||  ||||| ||||| | |||||||||||| || |||||    
T  21780771 cagtcaaagcaaagaccctaccagtagtcggcgccttcttaggcttcttgcactatgaaccaatgtgaccctcttcattacaattgaagcatactatatc 21780672  T
Q  213 a 213  Q
    |    
T  21780671 a 21780671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 188
Target Start/End: Original strand, 21329776 - 21329843
Alignment:
Q  121 gcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttc 188  Q
    ||||| ||||| ||||| ||||| ||||| ||||| ||| |||||| |||||||| ||||||||||||    
T  21329776 gcaaaaaccttcccaccagtctgggccttattaggcttcttgcactacgaactaatatgaccttcttc 21329843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 22042927 - 22042994
Alignment:
Q  16 caatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    ||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  22042927 caatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 22042994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 282 - 332
Target Start/End: Complemental strand, 20015678 - 20015628
Alignment:
Q  282 gcagacattactcttgtggcccttctcaccacacttgtagcaaacaatctc 332  Q
    |||||| |||||||||||||||||||||||||| ||| | || ||||||||    
T  20015678 gcagacgttactcttgtggcccttctcaccacaattgaaacacacaatctc 20015628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 22990135 - 22990212
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| ||||||||| || ||| | ||||||||||||||| |||||| ||||| | |||  |||| |||||||||||    
T  22990135 agcaataaaacaatgtttagcactagtatcaataatagcaactaaaggtgtactgtcaaaataacatgtacctctgat 22990212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 319; Significance: 1e-180; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 5 - 435
Target Start/End: Complemental strand, 21983608 - 21983178
Alignment:
Q  5 cagcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgt 104  Q
    |||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21983608 cagcaatgaaacaatgtgtagcaccagtatcaataatagtaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgt 21983509  T
Q  105 atgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaa 204  Q
     || ||| | | ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21983508 ctgcgtaacagtcaatgcaaacacctttccacctgcctgagccttcttaggcttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaa 21983409  T
Q  205 acaatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccct 304  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||  |||||||||||||||||||    
T  21983408 acaatatcaccacgcttgcattccgctatcgtatgccctttcttcccacatcggaagcactttttctcatcaccattgcgaacattactcttgtggccct 21983309  T
Q  305 tctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcaggaccatt 404  Q
    ||||||||||| | |||||||||||||||| ||| ||||||||||||||||||||||| ||||||||| | ||||| |||||||||||||||||| || |    
T  21983308 tctcaccacacctatagcaaacaatctcagcaggaacatctcttctcttaggtctcctctcatcattcaatctttgcttccctttgtcagcaggaacact 21983209  T
Q  405 gtagggcttcgaacaaccttgctggcctttg 435  Q
    ||||||||||| || ||||||||| ||||||    
T  21983208 gtagggcttcggacgaccttgctgacctttg 21983178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 5 - 435
Target Start/End: Complemental strand, 21561456 - 21561026
Alignment:
Q  5 cagcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgt 104  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21561456 cagcaatgaaacaatgtgtagcaccagtatcaataatagcaattaaagaagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgt 21561357  T
Q  105 atgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaa 204  Q
     ||  |||| | ||||||||||||||||||||||| || |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21561356 ttgcataccagtcaatgcaaacacctttccacctgcctaagccttcttatgcttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaa 21561257  T
Q  205 acaatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccct 304  Q
    ||||||||||| | |||||||| |||||||||||||||||||||||||||| ||||||||||||||||| || ||||||  |||||||||||||||||||    
T  21561256 acaatatcaccacacttgcatttcgctatcgtatgccctttcttcccacatcggaagcactttttctcaacaccattgctaacattactcttgtggccct 21561157  T
Q  305 tctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcaggaccatt 404  Q
    ||| |||||||||| ||||||||||||||| ||| ||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||| | || |    
T  21561156 tcttaccacacttgaagcaaacaatctcagcaggaacatctcttctcttaggtctcctctcatcattcaatctttgtttccctttgtcagcagtagcact 21561057  T
Q  405 gtagggcttcgaacaaccttgctggcctttg 435  Q
    ||||||||||| || ||||||||| ||||||    
T  21561056 gtagggcttcggacgaccttgctgacctttg 21561026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 121 - 415
Target Start/End: Original strand, 23669685 - 23669979
Alignment:
Q  121 gcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaacaatatcaccgcgct 220  Q
    ||||||||| |||||| || ||||||||||||||| ||| |||||||||| ||||| ||||||||||||||||| |||||||||||||||||||| ||||    
T  23669685 gcaaacacccttccacttgactgagccttcttaggattcttgcactgcgagctaaggtgaccttcttcgtcacatttgaagcaaacaatatcaccacgct 23669784  T
Q  221 tgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttctcaccacacttgta 320  Q
    ||||||| |||||||||||||| ||||| |||||| |||||||||| ||||| ||| ||||||| ||||||||||||||||| ||||||||||||| |||    
T  23669785 tgcattcagctatcgtatgccccttctttccacatcggaagcacttcttctcctcaccattgcaaacattactcttgtggcctttctcaccacactggta 23669884  T
Q  321 gcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcaggaccattgtagggcttcg 415  Q
    | |||||||||||| |||  ||||||| |||||||||||||| ||||||||| | ||||| |  ||||||||| ||||| || ||||||||||||    
T  23669885 ggaaacaatctcagcaggagcatctctcctcttaggtctcctctcatcattcaatctttgctctcctttgtcaacaggagcactgtagggcttcg 23669979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 74 - 369
Target Start/End: Complemental strand, 16258398 - 16258103
Alignment:
Q  74 tacctctgataagtcggtcctcattaactgtatgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaact 173  Q
    |||||| ||| || || ||||||||  |||| || ||||| || || ||||||||  ||||||  | |||| |||||||||| ||| |||||||||||||    
T  16258398 tacctcagatcagacgatcctcattcgctgtctgagtaccagctaaagcaaacactcttccactcgcctgacccttcttaggcttcttgcactgcgaact 16258299  T
Q  174 aagatgaccttcttcgtcacaattgaagcaaacaatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctca 273  Q
    |||||||||||| || ||||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||||||||| |||||||||| |||||     
T  16258298 aagatgaccttcctcatcacaattgaaacaaacaatatcaccacgcttgcattcagctattgtatgccctttcttcccacatcggaagcacttcttctcc 16258199  T
Q  274 tcaacattgcagacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatca 369  Q
    ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||| |||||||||||||| ||||||    
T  16258198 tcaccattgcaaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatca 16258103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 74 - 369
Target Start/End: Complemental strand, 22592117 - 22591822
Alignment:
Q  74 tacctctgataagtcggtcctcattaactgtatgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaact 173  Q
    |||||| ||| || || ||||||||  |||| || ||||| || || ||||||||  ||||||  | |||| |||||||||| ||| |||||||||||||    
T  22592117 tacctcagatcagacgatcctcattcgctgtctgagtaccagctaaagcaaacactcttccactcgcctgacccttcttaggcttcttgcactgcgaact 22592018  T
Q  174 aagatgaccttcttcgtcacaattgaagcaaacaatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctca 273  Q
    |||||||||||| || ||||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||||| ||| |||||||||| |||||     
T  22592017 aagatgaccttcctcatcacaattgaaacaaacaatatcaccacgcttgcattcagctattgtatgccctttcttcccccatcggaagcacttcttctcc 22591918  T
Q  274 tcaacattgcagacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatca 369  Q
    ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||| |||||||||||||| ||||||    
T  22591917 tcaccattgcaaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatca 22591822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 74 - 369
Target Start/End: Complemental strand, 22595672 - 22595377
Alignment:
Q  74 tacctctgataagtcggtcctcattaactgtatgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaact 173  Q
    |||||| ||| || || ||||||||  |||| || ||||| || || ||||||||  ||||||  | |||| |||||||||| ||| |||||||||||||    
T  22595672 tacctcagatcagacgatcctcattcgctgtctgagtaccagctaaagcaaacactcttccactcgcctgacccttcttaggcttcttgcactgcgaact 22595573  T
Q  174 aagatgaccttcttcgtcacaattgaagcaaacaatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctca 273  Q
    |||||||||||| || ||||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||||| ||| |||||||||| |||||     
T  22595572 aagatgaccttcctcatcacaattgaaacaaacaatatcaccacgcttgcattcagctattgtatgccctttcttcccccatcggaagcacttcttctcc 22595473  T
Q  274 tcaacattgcagacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatca 369  Q
    ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||| |||||||||||||| ||||||    
T  22595472 tcaccattgcaaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatca 22595377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 121 - 415
Target Start/End: Original strand, 43122520 - 43122814
Alignment:
Q  121 gcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaacaatatcaccgcgct 220  Q
    ||||||||||| |||||||||  | |||||||||| |   | ||||| ||||| ||||| ||||||||||||||||||||||||||||||||||| ||||    
T  43122520 gcaaacaccttgccacctgtcctaaccttcttaggctgtgtacactgtgaactgagatgtccttcttcgtcacaattgaagcaaacaatatcaccacgct 43122619  T
Q  221 tgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttctcaccacacttgta 320  Q
    ||||||| ||||||| |||||| ||||| |||||| |||||||||| ||||| ||| |||||||||||||||||||||||||| |||| |||||||||||    
T  43122620 tgcattcagctatcgcatgccccttctttccacatcggaagcacttcttctcctcaccattgcagacattactcttgtggcccctctcgccacacttgta 43122719  T
Q  321 gcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcaggaccattgtagggcttcg 415  Q
    |||||||||||| | | | |||||||| |||||||||||||| ||||||||| | ||||| |  ||||||||| || || || ||||||||||||    
T  43122720 gcaaacaatctctgcatgaacatctctcctcttaggtctcctctcatcattcaatctttgctctcctttgtcaacatgagcactgtagggcttcg 43122814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 6 - 367
Target Start/End: Complemental strand, 23563598 - 23563237
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| ||||| || ||| ||||| | || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||     
T  23563598 agcaattaaacattgagtagcaccagtttctataatatcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattagttgtt 23563499  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    || ||||| | ||| ||||||||||| ||||| |||  | ||||||| || | | | ||||||||||||| ||||||||| || |  || ||  | ||||    
T  23563498 tgcgtaccggtcaaagcaaacaccttaccaccagtcctaaccttcttcggctgcgtacactgcgaactaatatgaccttcctcattgcagttataacaaa 23563399  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    || | || || | ||| || || ||||  || || |||||||  |||||   ||||||||| ||||||||   ||  |||||||||||||||||||| ||    
T  23563398 cattgtctccacccttacagtcagctagtgtgtgtcctttctgaccacacctgaagcacttcttctcatctctatcacagacattactcttgtggccttt 23563299  T
Q  306 ctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcat 367  Q
     |||||||||||| |||||||||| ||||||||  ||||||| ||||| || ||||| ||||    
T  23563298 ttcaccacacttgaagcaaacaatgtcagtaggagcatctctcctcttgggcctcctctcat 23563237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 5 - 334
Target Start/End: Complemental strand, 21631830 - 21631501
Alignment:
Q  5 cagcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgt 104  Q
    ||||||| |||||||| ||| ||||| ||| |||||||||||||||||||||||||| |||| |||| |||||||| || |  ||||||||||| |||||    
T  21631830 cagcaataaaacaatgcgtagcaccagtattaataatagcaattaaaggagtactatcaaagtaacatgtacctctaatcaaccggtcctcattcactgt 21631731  T
Q  105 atgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaa 204  Q
     |||||||| | ||| |||||||| || ||||  ||||||||||||||||| ||| |||||||||||| || |||||||||||| |  || ||||| ||     
T  21631730 ctgtgtaccagtcaaagcaaacactttcccactagtctgagccttcttaggcttcttgcactgcgaaccaatatgaccttcttcattgcagttgaaacac 21631631  T
Q  205 acaatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccct 304  Q
    || | |||| |  |||| ||||| |  || ||||||| |||||| ||||| ||||| ||   |||| ||||  || | ||  |||||||| ||||||| |    
T  21631630 accacatcatcatgcttacattctgtaatagtatgccatttcttaccacaatggaaacatcgtttcacatccccagtacaagcattactcgtgtggcctt 21631531  T
Q  305 tctcaccacacttgtagcaaacaatctcag 334  Q
    ||||||||||  |||||||||||| |||||    
T  21631530 tctcaccacaagtgtagcaaacaacctcag 21631501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 6 - 328
Target Start/End: Original strand, 20824391 - 20824713
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    ||     
T  20824391 agcaatgaaacaatgtgtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctcattggtagtc 20824490  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgt-ctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaa 204  Q
    || ||||| | ||| ||||| || ||||| || || |||| |||||||||| | | |||||||||||||||  |||||||| ||  |||| || || |||    
T  20824491 tgcgtaccagtcaaagcaaatacttttcctccagtcctga-ccttcttaggttgcgtgcactgcgaactaatgtgaccttcatcaccacagttaaaacaa 20824589  T
Q  205 acaatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccct 304  Q
    |||||||| || |||||||| ||| | | |  ||| |||||||  || |||  ||| || || ||||||||   | ||||  ||||||||||||||||||    
T  20824590 acaatatctccacgcttgcagtccaccaacacatgacctttctgaccgcatctgaaacatttcttctcatcttgagtgcaagcattactcttgtggccct 20824689  T
Q  305 tctcaccacacttgtagcaaacaa 328  Q
    || ||||||| ||||| |||||||    
T  20824690 tcacaccacatttgtaacaaacaa 20824713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 7 - 399
Target Start/End: Complemental strand, 23078334 - 23077942
Alignment:
Q  7 gcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtat 106  Q
    |||||||||||||| ||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   || |    
T  23078334 gcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattagtagtct 23078235  T
Q  107 gtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaac 206  Q
    | ||||  | |||||||||||| || ||||| |||  ||||||||| || |   | ||||  ||||| | ||||||||||||||  || ||| |||||||    
T  23078234 gcgtactagtcaatgcaaacactttcccaccggtcctagccttcttcggctgagtacactatgaactgatatgaccttcttcgttgcagttgtagcaaac 23078135  T
Q  207 aatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttc 306  Q
    ||| || || ||||| ||||| ||||  || || |||||||  |||||   ||| || ||  |||||||   |   ||  |||| || |||||||| ||     
T  23078134 aatgtctccacgcttacattcagctagggtgtgtcctttctgaccacacctgaaacatttcctctcatctctaccacaagcattgcttttgtggcctttt 23078035  T
Q  307 tcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactt-tgtttccctttgtcagcagga 399  Q
    |||||||||||| | || |||||||||| |||  ||||||| ||||| || ||||| ||||||||| | ||| || ||||||||||||||||||    
T  23078034 tcaccacacttgaaacatacaatctcagcaggagcatctctcctcttgggcctcctatcatcattc-atcttctgcttccctttgtcagcagga 23077942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 6 - 99
Target Start/End: Complemental strand, 14884421 - 14884328
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatta 99  Q
    |||||| |||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14884421 agcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatta 14884328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 6 - 98
Target Start/End: Original strand, 20345220 - 20345312
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatt 98  Q
    |||||| |||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20345220 agcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatt 20345312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 6 - 99
Target Start/End: Original strand, 20778851 - 20778944
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatta 99  Q
    ||||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  20778851 agcaatgaaacaatgtgtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctcatta 20778944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 6 - 131
Target Start/End: Original strand, 22505617 - 22505742
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| |||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    ||     
T  22505617 agcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctttgataagtcggtcctcattggtagtc 22505716  T
Q  106 tgtgtacctgccaatgcaaacacctt 131  Q
    || ||||| | |||||||||||||||    
T  22505717 tgcgtaccagtcaatgcaaacacctt 22505742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 6 - 98
Target Start/End: Original strand, 25851010 - 25851102
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatt 98  Q
    |||||| |||||||| ||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  25851010 agcaataaaacaatgagtagcaccagtatcaataatagcaattaaatgagtactattaaagaaacaagtacctctgataagacggtcctcatt 25851102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 22464888 - 22464977
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctc 95  Q
    ||||||||||||||| ||| ||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  22464888 agcaatgaaacaatgcgtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctc 22464977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 6 - 99
Target Start/End: Complemental strand, 28892372 - 28892279
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatta 99  Q
    ||||||||||||||| ||| ||||| | || |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  28892372 agcaatgaaacaatgcgtagcaccagtgtctataatagcaattaaaggagtaccattaaagaaacaagtacctctgataagtcgatcctcatta 28892279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 6 - 99
Target Start/End: Complemental strand, 17266764 - 17266671
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatta 99  Q
    ||||||||||||||| ||| ||||| | || |||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||    
T  17266764 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctttgatgagacggtcctcatta 17266671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 286 - 413
Target Start/End: Original strand, 22505897 - 22506024
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactt-tgtttc 384  Q
    ||||| ||||||||||| ||||||||||||||||| ||||||||||||| |||  ||||||| |||||||| ||||| ||||||||| | ||| || ||     
T  22505897 acattgctcttgtggcctttctcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggcctcctatcatcattc-atcttctgcttt 22505995  T
Q  385 cctttgtcagcaggaccattgtagggctt 413  Q
    ||||||||||||||| || |||| |||||    
T  22505996 cctttgtcagcaggagcactgtaaggctt 22506024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 21410085 - 21410297
Alignment:
Q  1 tcagcagcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaa 100  Q
    ||||||||||| ||||||| |||| ||||| |||| || |||| |||||| ||||||||||||| |||||| ||||||||||| || || ||||||||      
T  21410085 tcagcagcaataaaacaatatgtagcaccagtatctatgatagtaattaagggagtactattaatgaaacatgtacctctgatcagacgatcctcattct 21410184  T
Q  101 ctgtatgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaa 200  Q
    |||| |  ||||| || || ||||||||||| | ||  | |||||| || ||||| ||| | ||||| |  |||| ||| ||||||||  |||| || ||    
T  21410185 ctgtctaagtaccagctaaagcaaacaccttgcaactagactgagctttattaggtttcttacactgagggctaatatgtccttcttcaccacatttaaa 21410284  T
Q  201 gcaaacaatatca 213  Q
    |||||| ||||||    
T  21410285 gcaaactatatca 21410297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 283 - 369
Target Start/End: Complemental strand, 14884144 - 14884058
Alignment:
Q  283 cagacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatca 369  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||||||  ||  ||||||| ||||| || ||||| ||||||    
T  14884144 cagacattactcttgtggcctttctcaccacacttgtaacaaacaatctcagctggagcatctctcctcttgggcctcctatcatca 14884058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 286 - 369
Target Start/End: Original strand, 20345500 - 20345583
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatca 369  Q
    ||||||||||||||| | ||||||||||||||||| ||||||||||||| |||  ||||||| ||||| || ||||| ||||||    
T  20345500 acattactcttgtgggctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcctcctatcatca 20345583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 286 - 333
Target Start/End: Original strand, 25851290 - 25851337
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctca 333  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  25851290 acattactcttgtggcctttctcaccacacttgtagcaaacaatctca 25851337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 286 - 372
Target Start/End: Complemental strand, 21870428 - 21870342
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattc 372  Q
    ||||||||||||||| | ||||||||||||||| ||||||  |||||||||||  ||||||| |||||||| |||||  ||||||||    
T  21870428 acattactcttgtggtctttctcaccacacttgaagcaaattatctcagtaggagcatctctcctcttaggcctcctcccatcattc 21870342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 286 - 372
Target Start/End: Complemental strand, 21874708 - 21874622
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattc 372  Q
    ||||||||||||||| | ||||||||||||||| ||||||  |||||||||||  ||||||| |||||||| |||||  ||||||||    
T  21874708 acattactcttgtggtctttctcaccacacttgaagcaaattatctcagtaggagcatctctcctcttaggcctcctcccatcattc 21874622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 26736150 - 26736080
Alignment:
Q  13 aaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||||||||| ||||| ||||||||||||||| |||||| ||||||| |||  ||||||||||||||||    
T  26736150 aaacaatgtgtagcaccagtatcaataatagcaactaaaggtgtactatcaaaataacaagtacctctgat 26736080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 14997169 - 14997092
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||||||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  14997169 agcaataaaacaatgtgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 14997092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 21332416 - 21332339
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||||||| ||||| ||||||||||||||| |||||| ||||||| |||  |||| |||||||||||    
T  21332416 agcaataaaacaatgtgtagcaccagtatcaataatagcaactaaaggtgtactatcaaaataacatgtacctctgat 21332339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 37288926 - 37288849
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||||||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  37288926 agcaataaaacaatgtgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 37288849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 16359458 - 16359535
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  16359458 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 16359535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 19772916 - 19772993
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  19772916 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 19772993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 22330317 - 22330240
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  22330317 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 22330240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 23526007 - 23526084
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||||||  ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  23526007 agcaataaaacaatgtgttgcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 23526084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 27521362 - 27521439
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  27521362 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 27521439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 27613312 - 27613389
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  27613312 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 27613389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 27665920 - 27665843
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  27665920 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 27665843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 27682830 - 27682753
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  27682830 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 27682753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 29473503 - 29473426
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  29473503 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 29473426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 34569450 - 34569527
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  34569450 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 34569527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 40711736 - 40711813
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  40711736 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaagatagcaagtacctctgat 40711813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 41773798 - 41773875
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  41773798 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 41773875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 209
Target Start/End: Original strand, 21882730 - 21882933
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| |||||||| ||| ||||| ||||||||||| ||| |||||||||| ||||||   | |||||||||||||| |  || ||||||||   |||     
T  21882730 agcaataaaacaatgcgtagcaccagtatcaataataccaactaaaggagtattattaatatagcaagtacctctgatcaagcgatcctcattctttgtc 21882829  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    |||||||| ||||| || || ||| | |||   ||| |  |||||||||| | | | ||||| |||| ||  ||||||||||| | |||||||||||| |    
T  21882830 tgtgtaccagccaaagccaaaaccctaccagtagtcggcaccttcttaggctgcttacactgagaaccaatgtgaccttcttcattacaattgaagcaca 21882929  T
Q  206 caat 209  Q
    ||||    
T  21882930 caat 21882933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 18782070 - 18782147
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| || ||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  18782070 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 18782147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 22137624 - 22137701
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| || ||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  22137624 agcaataaagcaatgcgtatcaccattatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 22137701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 23460947 - 23461004
Alignment:
Q  26 caccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    ||||||||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  23460947 caccaatatcaataatagcaactaaaggagtattattaatacagcaagtacctctgat 23461004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 25429377 - 25429454
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||| ||| ||| ||   ||||||||||||||||    
T  25429377 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggtgtattatcaatataacaagtacctctgat 25429454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 6 - 98
Target Start/End: Original strand, 23474151 - 23474243
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatt 98  Q
    |||||| |||||||||||| ||||  ||||||||||||||| |||||| |||| || |||  |||| |||||||| || | ||| ||||||||    
T  23474151 agcaataaaacaatgtgtagcaccggtatcaataatagcaactaaaggtgtacaatcaaaataacatgtacctctaatcaatcgatcctcatt 23474243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 334
Target Start/End: Original strand, 23474431 - 23474478
Alignment:
Q  287 cattactcttgtggcccttctcaccacacttgtagcaaacaatctcag 334  Q
    |||||||||| ||||| |||||||||||  ||||||||||||||||||    
T  23474431 cattactcttatggcctttctcaccacaagtgtagcaaacaatctcag 23474478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 20803553 - 20803611
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaa 64  Q
    |||||| |||||||| ||| ||| | ||||||||||||||| |||||||||| ||||||    
T  20803553 agcaataaaacaatgcgtagcactagtatcaataatagcaactaaaggagtattattaa 20803611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 282 - 332
Target Start/End: Original strand, 27613588 - 27613638
Alignment:
Q  282 gcagacattactcttgtggcccttctcaccacacttgtagcaaacaatctc 332  Q
    ||||||||| ||||||||||||||||||||||| ||| | || ||||||||    
T  27613588 gcagacattgctcttgtggcccttctcaccacaattgaaacacacaatctc 27613638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 328
Target Start/End: Original strand, 20779132 - 20779173
Alignment:
Q  287 cattactcttgtggcccttctcaccacacttgtagcaaacaa 328  Q
    |||||||||||||||||||| ||||||| ||||| |||||||    
T  20779132 cattactcttgtggcccttcacaccacatttgtaacaaacaa 20779173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 22350875 - 22350952
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| || ||||| ||| ||| | ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  22350875 agcaataaagcaatgcgtagcactagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 22350952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 328
Target Start/End: Complemental strand, 28892091 - 28892050
Alignment:
Q  287 cattactcttgtggcccttctcaccacacttgtagcaaacaa 328  Q
    |||||||||||||||||||| ||||||| ||||| |||||||    
T  28892091 cattactcttgtggcccttcacaccacatttgtaacaaacaa 28892050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 285; Significance: 1e-159; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 285; E-Value: 1e-159
Query Start/End: Original strand, 8 - 432
Target Start/End: Complemental strand, 12204033 - 12203609
Alignment:
Q  8 caatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatg 107  Q
    ||||||||||||||||| ||||| | || |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| || |     
T  12204033 caatgaaacaatgtgtagcaccagtgtctataatagcaattaaaggattactattaaagaaacaagtacctctgataagtcgatcctcattaaccgtcta 12203934  T
Q  108 tgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaaca 207  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||||    
T  12203933 tgtaccggtcaatgcaaacacctttccacctgtctgagccttcttaggcttcctgcattgcgagctaagatgaccttcttcatcacaattgaagcaaaca 12203834  T
Q  208 atatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttct 307  Q
    |||||| | ||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||| |||| || ||||||||||||||||||||||    
T  12203833 atatcatcacgcttgcattcagctatcgtatgccctttcttcccacatcagaagcactttttctcatcaccattacaaacattactcttgtggcccttct 12203734  T
Q  308 caccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcaggaccattgta 407  Q
    ||||||||||||||||||||||| ||| ||| |||||||| |||||||||||||| ||||||||| | |||||||||||||||||||||||| || ||||    
T  12203733 caccacacttgtagcaaacaatcacagcaggaacatctctcctcttaggtctcctctcatcattcaatctttgtttccctttgtcagcaggagcactgta 12203634  T
Q  408 gggcttcgaacaaccttgctggcct 432  Q
    |||||| | || |||||||||||||    
T  12203633 gggcttaggacgaccttgctggcct 12203609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 8 - 398
Target Start/End: Original strand, 19150027 - 19150417
Alignment:
Q  8 caatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatg 107  Q
    ||||||||||||| |||  |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||    
T  19150027 caatgaaacaatgagtagaaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattcacagtttg 19150126  T
Q  108 tgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaaca 207  Q
     ||||| | ||| ||||| || || |||||| ||  |||||||||||| | | | ||||||||||||| ||| |||||||| | ||| ||| ||||||||    
T  19150127 cgtaccagtcaacgcaaatactttaccacctatcctagccttcttaggttgcgtacactgcgaactaatatgtccttcttcattacagttgtagcaaaca 19150226  T
Q  208 atatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttct 307  Q
    ||||| || |||||||| || || |  || || |||||||  |||||    |||||||| |||| |||   ||  || |||||||| |||||||| ||||    
T  19150227 atatctccacgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagcacttcttctgatctcgatcacacacattactgttgtggcctttct 19150326  T
Q  308 caccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcagg 398  Q
    ||||||||||| |||||||||| ||||||||  ||||||| |||||||| ||||| ||||||||| | || || || || |||||||||||    
T  19150327 caccacacttgaagcaaacaatatcagtaggagcatctctcctcttaggcctcctctcatcattcaacctctgcttacccttgtcagcagg 19150417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 8 - 398
Target Start/End: Original strand, 20749426 - 20749816
Alignment:
Q  8 caatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatg 107  Q
    ||||||||||||| |||  |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||    
T  20749426 caatgaaacaatgagtagaaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattcacagtttg 20749525  T
Q  108 tgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaaca 207  Q
     ||||| | ||| ||||| || || |||||| ||  |||||||||||| | | | ||||||||||||| ||| |||||||| | ||| ||| ||||||||    
T  20749526 cgtaccagtcaacgcaaatactttaccacctatcctagccttcttaggttgcgtacactgcgaactaatatgtccttcttcattacagttgtagcaaaca 20749625  T
Q  208 atatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttct 307  Q
    ||||| || |||||||| || || |  || || |||||||  |||||    |||||||| |||| |||   ||  || |||||||| |||||||| ||||    
T  20749626 atatctccacgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagcacttcttctgatctcgatcacacacattactgttgtggcctttct 20749725  T
Q  308 caccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcagg 398  Q
    ||||||||||| |||||||||| ||||||||  ||||||| |||||||| ||||| ||||||||| | || || || || |||||||||||    
T  20749726 caccacacttgaagcaaacaatatcagtaggagcatctctcctcttaggcctcctctcatcattcaacctctgcttacccttgtcagcagg 20749816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 8 - 399
Target Start/End: Complemental strand, 12798734 - 12798346
Alignment:
Q  8 caatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatg 107  Q
    ||||||||||||| ||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  12798734 caatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattcactgtttg 12798635  T
Q  108 tgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaaca 207  Q
     ||||| | ||| ||||| ||||| |||||||||  |||||||||||| |   | ||||||||||| | |||||||||||| | ||| ||| ||||||||    
T  12798634 cgtaccagtcaacgcaaaaaccttgccacctgtcctagccttcttaggctgtgtacactgcgaactgatatgaccttcttcattacagttgtagcaaaca 12798535  T
Q  208 atatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttct 307  Q
    | ||| || ||||  || || ||||  || || |||||||  |||||   ||||||||| ||||||||    |  || ||||||||||||||||| ||      
T  12798534 acatccccacgctcacaatcagctaaagtgtgtcctttctgaccacacctgaagcacttcttctcatctcggtcacaaacattactcttgtggccttt-- 12798437  T
Q  308 caccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcagga 399  Q
      ||||||||| | |||||||| |||||| |  ||||||| |||||  | ||||| ||||||||| | || || || || ||||||||||||    
T  12798436 -tccacacttgaaacaaacaatatcagtatgagcatctctcctcttgagcctcctctcatcattcaatctctgcttacccttgtcagcagga 12798346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 8 - 372
Target Start/End: Complemental strand, 14261479 - 14261115
Alignment:
Q  8 caatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatg 107  Q
    ||||||||||||| ||| ||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |  || ||    
T  14261479 caatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaataagtacctctgataagtcggtcctcattcatagtttg 14261380  T
Q  108 tgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaaca 207  Q
     ||||| | ||| ||||| ||||| |||||||||  | |||||||||| | | |  |||||||||||| ||| ||||| || | ||| ||| ||||||||    
T  14261379 cgtaccagtcaacgcaaataccttgccacctgtcctaaccttcttaggctgcataaactgcgaactaatatgtccttcctcattacagttgtagcaaaca 14261280  T
Q  208 atatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttct 307  Q
    ||||| || |||||||| || || |  || || |||||||  | |||    ||| |||| ||||||||   ||  |  ||||||||||||||||| ||||    
T  14261279 atatccccacgcttgcaatcagccaatgtgtgtcctttctgactacacctaaagtacttcttctcatctcgatgacgcacattactcttgtggcctttct 14261180  T
Q  308 caccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattc 372  Q
    ||||||||||| |||||| ||||||||||||  ||| ||| | |||||| ||||| |||||||||    
T  14261179 caccacacttgaagcaaataatctcagtaggagcatatctccccttaggcctcctctcatcattc 14261115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 5 - 371
Target Start/End: Complemental strand, 15099839 - 15099473
Alignment:
Q  5 cagcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgt 104  Q
    |||||||||||||||| ||| ||||| |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  15099839 cagcaatgaaacaatgagtatcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacatctgataagtcggtcctcattaactgt 15099740  T
Q  105 atgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaa 204  Q
     ||  |||| |  || ||||||||||| |||||||||  | ||||||| || | | | ||||||||||| | ||||||||| || |  || ||  | |||    
T  15099739 ctgcataccagttaaagcaaacaccttaccacctgtcctaaccttcttcggctgcgtacactgcgaactgatatgaccttcctcattgcagttataacaa 15099640  T
Q  205 acaatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccct 304  Q
    || || || || ||||| || ||  |||  || || || ||||  |||||   ||||||||| ||||||||   ||  || || |||||||||||||| |    
T  15099639 acgatgtccccacgcttacaatcatctagagtgtgtcccttctgaccacacctgaagcacttcttctcatctctatcacaaacgttactcttgtggcctt 15099540  T
Q  305 tctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcatt 371  Q
    |||||||||||||| ||||||| || ||||||||  ||||||| ||||| || |||||  |||||||    
T  15099539 tctcaccacacttgaagcaaactatgtcagtaggagcatctctcctcttgggcctcctcccatcatt 15099473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 6 - 369
Target Start/End: Complemental strand, 13965903 - 13965540
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| |||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||     
T  13965903 agcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattggtagtc 13965804  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    || ||||| | ||||||||||||||| ||||| ||   ||||||||| || |     ||||| ||||| | |||||| ||| | |  |||||| |||| |    
T  13965803 tgcgtaccagtcaatgcaaacaccttcccaccagttctagccttcttcggctcaggacactgtgaactgatatgaccctctccattgcaattgtagcaga 13965704  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    ||||||| || ||||||||||| ||||   | || || ||||  |||||   |||||| ||| | |||||   |   || ||||||||||||||| | ||    
T  13965703 caatatccccacgcttgcattcagctagactgtgacccttctgaccacacctgaagcattttctatcatctttaccacaaacattactcttgtggtcttt 13965604  T
Q  306 ctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatca 369  Q
    ||||||||||||||||||| ||||||||| |||  ||||||| ||||| || ||||| ||||||    
T  13965603 ctcaccacacttgtagcaatcaatctcagcaggagcatctctcctcttgggcctcctatcatca 13965540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 6 - 413
Target Start/End: Complemental strand, 26115825 - 26115418
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||   ||     
T  26115825 agcaataaaacaatgagtagcaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgatgagtcggtcctcattaggagtg 26115726  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctg-cactgcgaactaagatgaccttcttcgtcacaattgaagcaa 204  Q
    || ||||| | ||| ||||||||||||||||| ||   || ||||||  |||||  | ||||| | ||||| |||||||||| | |  |||||| | ||     
T  26115725 tgcgtaccagtcaaagcaaacacctttccaccagttctagtcttctt-cggttcaggacactgtgtactaatatgaccttctccattgcaattgtaacag 26115627  T
Q  205 acaatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccct 304  Q
    ||||| || || ||||||||||| ||||   | || || ||||  |||||   |||||||||  | |||||       || ||||||||||||||||| |    
T  26115626 acaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctt 26115527  T
Q  305 tctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactt-tgtttccctttgtcagcaggaccat 403  Q
    |||||||||||||||| |||||||||||||  ||  ||||||| ||||| || ||||| |||||| || | ||| || || ||||||||||||||| ||     
T  26115526 tctcaccacacttgtaacaaacaatctcagccggagcatctctcctcttgggcctcctatcatcactc-atcttctgctttcctttgtcagcaggagcac 26115428  T
Q  404 tgtagggctt 413  Q
    |||| |||||    
T  26115427 tgtaaggctt 26115418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 6 - 137
Target Start/End: Complemental strand, 26092033 - 26091902
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| |||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||     
T  26092033 agcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaggagtc 26091934  T
Q  106 tgtgtacctgccaatgcaaacacctttccacc 137  Q
    || ||||| | ||| |||||||||||||||||    
T  26091933 tgcgtaccagtcaaagcaaacacctttccacc 26091902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 6 - 137
Target Start/End: Original strand, 49155315 - 49155446
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| |||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||     
T  49155315 agcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaggagtc 49155414  T
Q  106 tgtgtacctgccaatgcaaacacctttccacc 137  Q
    || ||||| | ||| |||||||||||||||||    
T  49155415 tgcgtaccagtcaaagcaaacacctttccacc 49155446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 6 - 131
Target Start/End: Original strand, 21755426 - 21755551
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||     
T  21755426 agcaataaaacaatgagtagcaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattggtagtc 21755525  T
Q  106 tgtgtacctgccaatgcaaacacctt 131  Q
    || ||||| | |||||||||||||||    
T  21755526 tgcgtaccagtcaatgcaaacacctt 21755551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 6 - 134
Target Start/End: Complemental strand, 40925052 - 40924924
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| |||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||     
T  40925052 agcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaggagtc 40924953  T
Q  106 tgtgtacctgccaatgcaaacacctttcc 134  Q
    || ||||| | ||| ||||||||||||||    
T  40924952 tgcgtaccagtcaaagcaaacacctttcc 40924924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 6 - 399
Target Start/End: Original strand, 13024359 - 13024751
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| ||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    ||     
T  13024359 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagt-ctattaaagaaacaagtacctctgataagtcggtcctcatttgtagtc 13024457  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    || ||||| | |||||||||||| || ||||| |||  ||||||||| || |   | ||||| ||||| | ||||||||||||||  || ||| |||| |    
T  13024458 tgcgtaccagtcaatgcaaacactttcccaccggtcctagccttcttcggctgagtacactgagaactgatatgaccttcttcgttgcagttgtagcaga 13024557  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    |||| || || ||||| ||||| ||||  || || |||||||  |||||   ||| || ||  ||||||    |    |  |||| || |||||||| ||    
T  13024558 caatgtctccacgcttacattcagctagggtgtgtcctttctaaccacacctgaaacatttcctctcatatctaccataagcattgcttttgtggccttt 13024657  T
Q  306 ctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcagga 399  Q
     |||||||||||||| |||||||| |||| |||  ||||||| ||||| || ||||| |||||||||   || || ||||||||||||||||||    
T  13024658 ttcaccacacttgtaacaaacaatttcagcaggagcatctctcctcttgggcctcctatcatcattcatcctctgcttccctttgtcagcagga 13024751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 7 - 328
Target Start/End: Original strand, 15627538 - 15627859
Alignment:
Q  7 gcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtat 106  Q
    ||||| |||||||| ||| ||||| |||||||||||| ||||||||||||||||| |||||| || |||||| | || |  ||||||||||| ||||| |    
T  15627538 gcaataaaacaatgcgtatcaccagtatcaataatagtaattaaaggagtactatcaaagaagcatgtacctataatcaaccggtcctcattcactgttt 15627637  T
Q  107 gtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaac 206  Q
    | ||||| | ||| |||||||| || ||||  || |||||||||||||| | | | |||||||||| || |||||| ||||| |  || ||||| || ||    
T  15627638 gcgtaccagtcaaagcaaacactttcccactagtttgagccttcttaggctactttcactgcgaaccaatatgaccctcttcattgcagttgaaacacac 15627737  T
Q  207 aatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttc 306  Q
     | |||| |  |||||||||| |  || |||||||||||||| ||||| ||||| |||| |||| ||||   | | ||  | |||||||||||||| |||    
T  15627738 cacatcatcatgcttgcattctgtaatagtatgccctttcttaccacaatggaaacactgtttcacatcccaagtacaagcgttactcttgtggcctttc 15627837  T
Q  307 tcaccacacttgtagcaaacaa 328  Q
    |||||||| |||||||||||||    
T  15627838 tcaccacagttgtagcaaacaa 15627859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 6 - 99
Target Start/End: Complemental strand, 16947707 - 16947614
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatta 99  Q
    ||||||||||||||| ||| ||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  16947707 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaatgagtactattaaagaaacaagtacctctgataagtcggtcctcatta 16947614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 6 - 137
Target Start/End: Complemental strand, 18051188 - 18051057
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| ||||| | || ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| | ||     
T  18051188 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgatgagacggtcctcattagcagtc 18051089  T
Q  106 tgtgtacctgccaatgcaaacacctttccacc 137  Q
    |||||||| | ||| ||||| || ||||||||    
T  18051088 tgtgtaccagtcaaagcaaaaacttttccacc 18051057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 6 - 137
Target Start/End: Complemental strand, 11385664 - 11385533
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| || || | || |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||   ||     
T  11385664 agcaatgaaacaatgagtagcatcagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtctgtcctcattagtagtc 11385565  T
Q  106 tgtgtacctgccaatgcaaacacctttccacc 137  Q
    || ||||| | ||| ||||||||||| |||||    
T  11385564 tgcgtaccagtcaaagcaaacaccttcccacc 11385533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 15343445 - 15343575
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| ||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||   ||     
T  15343445 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagcctgtcctcattagtagtc 15343544  T
Q  106 tgtgtacctgccaatgcaaacacctttccac 136  Q
    || ||||| | ||| |||||||| |||||||    
T  15343545 tgcgtaccagtcaaagcaaacacttttccac 15343575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 6 - 99
Target Start/End: Original strand, 14140693 - 14140786
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatta 99  Q
    ||||||||||||||| ||| ||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  14140693 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtctttcctcatta 14140786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 6 - 99
Target Start/End: Complemental strand, 14283609 - 14283516
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatta 99  Q
    ||||||||||||||| ||| ||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  14283609 agcaatgaaacaatgagtagcaccaatgtctataatagcaatgaaaggagtactattaaagaaacaagtacctctgataagacagtcctcatta 14283516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 6 - 98
Target Start/End: Original strand, 12459642 - 12459734
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatt 98  Q
    |||||| |||||||  ||| || || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12459642 agcaataaaacaattagtagcatcagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatt 12459734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 6 - 96
Target Start/End: Original strand, 13676465 - 13676555
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctca 96  Q
    ||||||||||||||| ||| |||||   || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  13676465 agcaatgaaacaatgagtagcaccagcgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctca 13676555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 286 - 399
Target Start/End: Original strand, 13676745 - 13676858
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttcc 385  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||  |||  ||||||| ||||| || ||||| ||||||||| | || ||||| |    
T  13676745 acattactcttgtggcctttcttaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctctcatcattcaacctctgttttc 13676844  T
Q  386 ctttgtcagcagga 399  Q
    ||||||||||||||    
T  13676845 ctttgtcagcagga 13676858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 286 - 369
Target Start/End: Complemental strand, 26091753 - 26091670
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatca 369  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||  |||  ||||||| ||||| || ||||| ||||||    
T  26091753 acattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatca 26091670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 286 - 369
Target Start/End: Complemental strand, 40924772 - 40924689
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatca 369  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||  |||  ||||||| ||||| || ||||| ||||||    
T  40924772 acattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatca 40924689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 286 - 362
Target Start/End: Original strand, 49155595 - 49155671
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcct 362  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||  |||  ||||||| ||||| || |||||    
T  49155595 acattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcct 49155671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 287 - 372
Target Start/End: Original strand, 12459923 - 12460008
Alignment:
Q  287 cattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattc 372  Q
    |||| ||||||||||| || |||||||||||||| || |||||||||| ||| |||||||| ||||| || ||||| |||||||||    
T  12459923 cattgctcttgtggcctttttcaccacacttgtaacagacaatctcagcaggaacatctctcctcttgggcctcctatcatcattc 12460008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 125
Target Start/End: Complemental strand, 17703712 - 17703593
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| || ||||||||| ||| | ||||||||||||||| |||||||||| ||||||   |||||||||||||||| |  || ||||||||  ||||     
T  17703712 agcaataaagcaatgtgtagcactagtatcaataatagcaactaaaggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 17703613  T
Q  106 tgtgtacctgccaatgcaaa 125  Q
    || ||||| ||||| |||||    
T  17703612 tgagtaccagccaaagcaaa 17703593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 286 - 413
Target Start/End: Original strand, 21755706 - 21755833
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttcc 385  Q
    ||||| ||||||||||| || |||||||||||||| |||||||||||||  ||  ||||||| |||||||| ||| | |||||| ||  | | || || |    
T  21755706 acattgctcttgtggcctttttcaccacacttgtaacaaacaatctcagagggagcatctctcctcttaggcctcatgtcatcactcatattctgctttc 21755805  T
Q  386 ctttgtcagcaggaccattgtagggctt 413  Q
    |||||||||||||| || |||| |||||    
T  21755806 ctttgtcagcaggagcactgtaaggctt 21755833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 8710618 - 8710695
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  8710618 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 8710695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 9591377 - 9591454
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| || ||||||||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  9591377 agcaataaagcaatgtgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 9591454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 13689054 - 13689131
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  13689054 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 13689131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 14335409 - 14335486
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  14335409 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 14335486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 44788608 - 44788531
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  44788608 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 44788531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 121 - 213
Target Start/End: Original strand, 15114330 - 15114422
Alignment:
Q  121 gcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaacaatatca 213  Q
    ||||| ||||| ||||| || || ||||||||||| ||| ||||||||||||||| |||||||||||| | ||| ||  ||||||| ||||||    
T  15114330 gcaaaaaccttcccaccagtttgggccttcttaggcttcttgcactgcgaactaatatgaccttcttccttacagttatagcaaaccatatca 15114422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 125
Target Start/End: Complemental strand, 16726698 - 16726579
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| || ||||||||| ||| | ||||||||||||||| |||||||||| ||||||   | |||||||||||||| |  || ||||||||  ||||     
T  16726698 agcaataaagcaatgtgtagcactagtatcaataatagcaactaaaggagtattattaatatatcaagtacctctgatcaaacgatcctcattctctgtc 16726599  T
Q  106 tgtgtacctgccaatgcaaa 125  Q
    || ||||| ||||| |||||    
T  16726598 tgagtaccagccaaagcaaa 16726579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 11234470 - 11234393
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||| ||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  11234470 agcaataaaacaatgcgtagcaccagtattaataatagcaactaaaggagtattattaatatagcaagtacctctgat 11234393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 11550359 - 11550282
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| || ||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  11550359 agcaataaagcaatgagtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 11550282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 14042708 - 14042785
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||| ||| |||||| ||||||| |||  |||| |||||||||||    
T  14042708 agcaataaaacaatgcgtagcaccagtatcaataataacaactaaaggtgtactatcaaaataacatgtacctctgat 14042785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 286 - 347
Target Start/End: Complemental strand, 14283329 - 14283268
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctct 347  Q
    ||||||||||||||||| ||||| ||||||||||| ||||||| ||||| |||  |||||||    
T  14283329 acattactcttgtggcctttctcgccacacttgtaacaaacaacctcagcaggagcatctct 14283268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 14352738 - 14352815
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||| ||| |||||| ||||||| |||  |||| |||||||||||    
T  14352738 agcaataaaacaatgcgtagcaccagtatcaataataacaactaaaggtgtactatcaaaataacatgtacctctgat 14352815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 14957567 - 14957644
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| || ||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  14957567 agcaataaagcaatgagtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 14957644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 15158314 - 15158237
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| || ||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  15158314 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 15158237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 18587428 - 18587351
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||| ||| |||||||||| ||||||   | ||||||||||||||    
T  18587428 agcaataaaacaatgcgtagcaccagtatcaataataacaactaaaggagtattattaatatagcaagtacctctgat 18587351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 88
Target Start/End: Complemental strand, 12712847 - 12712816
Alignment:
Q  57 actattaaagaaacaagtacctctgataagtc 88  Q
    ||||||||||||||||||||||||||||||||    
T  12712847 actattaaagaaacaagtacctctgataagtc 12712816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 81
Target Start/End: Complemental strand, 15146180 - 15146105
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctg 81  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||| || |||||||   |||| |||||||||    
T  15146180 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggtgttctattaatataacatgtacctctg 15146105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 329
Target Start/End: Complemental strand, 16947426 - 16947384
Alignment:
Q  287 cattactcttgtggcccttctcaccacacttgtagcaaacaat 329  Q
    |||||||||||||||| || |||||||||||||| ||||||||    
T  16947426 cattactcttgtggcctttttcaccacacttgtaacaaacaat 16947384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 18180756 - 18180833
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| || ||||| ||| ||||| ||||||||||| ||| |||||||||| ||||||   | ||||||||||||||    
T  18180756 agcaataaagcaatgcgtagcaccagtatcaataataacaactaaaggagtattattaatatagcaagtacctctgat 18180833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 263; Significance: 1e-146; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 5 - 435
Target Start/End: Original strand, 15230255 - 15230685
Alignment:
Q  5 cagcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgt 104  Q
    |||||||||||||||||||| ||||| | || |||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||| ||    
T  15230255 cagcaatgaaacaatgtgtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctatgataagtcaatcctcattaaccgt 15230354  T
Q  105 atgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaa 204  Q
      ||||||| | |||||||||||||||||||||||||||| |||||||||| |||||||| ||||| ||||||||||||||||| |||||||||||||||    
T  15230355 ccgtgtaccggtcaatgcaaacacctttccacctgtctgatccttcttaggcttcctgcattgcgagctaagatgaccttcttcatcacaattgaagcaa 15230454  T
Q  205 acaatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccct 304  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||  ||| ||||||||||||||| |||| || |||||||||||||||||||    
T  15230455 acaatatcaccacgcttgcattcagctatcgtatgccctttcttcccacatcagaaacactttttctcatcaccattacaaacattactcttgtggccct 15230554  T
Q  305 tctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcaggaccatt 404  Q
    | |||||||||||||||||||||||||||| ||| |||||| |||||||||| ||||| ||||||||  | ||||| |||||||||||||||||| || |    
T  15230555 tttcaccacacttgtagcaaacaatctcagcaggaacatcttttctcttaggcctcctctcatcatttaatctttgcttccctttgtcagcaggagcact 15230654  T
Q  405 gtagggcttcgaacaaccttgctggcctttg 435  Q
     |||||||| | || |||||| |||||||||    
T  15230655 atagggcttaggacgaccttgttggcctttg 15230685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 5 - 435
Target Start/End: Original strand, 15236123 - 15236553
Alignment:
Q  5 cagcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgt 104  Q
    |||||||||||||||||||| ||||| | || |||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||| ||    
T  15236123 cagcaatgaaacaatgtgtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctatgataagtcaatcctcattaaccgt 15236222  T
Q  105 atgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaa 204  Q
      ||||||| | |||||||||||||||||||||||||||| |||||||||| |||||||| ||||| ||||||||||||||||| |||||||||||||||    
T  15236223 ccgtgtaccggtcaatgcaaacacctttccacctgtctgatccttcttaggcttcctgcattgcgagctaagatgaccttcttcatcacaattgaagcaa 15236322  T
Q  205 acaatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccct 304  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||  ||| ||||||||||||||| |||| || |||||||||||||||||||    
T  15236323 acaatatcaccacgcttgcattcagctatcgtatgccctttcttcccacatcagaaacactttttctcatcaccattacaaacattactcttgtggccct 15236422  T
Q  305 tctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcaggaccatt 404  Q
    | |||||||||||||||||||||||||||| ||| |||||| |||||||||| ||||| ||||||||  | ||||| |||||||||||||||||| || |    
T  15236423 tttcaccacacttgtagcaaacaatctcagcaggaacatcttttctcttaggcctcctctcatcatttaatctttgcttccctttgtcagcaggagcact 15236522  T
Q  405 gtagggcttcgaacaaccttgctggcctttg 435  Q
     |||||||| | || |||||| |||||||||    
T  15236523 atagggcttaggacgaccttgttggcctttg 15236553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 5 - 399
Target Start/End: Complemental strand, 12857972 - 12857579
Alignment:
Q  5 cagcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgt 104  Q
    |||||||||||||||   || ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||    
T  12857972 cagcaatgaaacaataactagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcg-tcctcattaacagt 12857874  T
Q  105 atgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaa 204  Q
     || ||||| | ||| ||||||||||| ||||||||| ||||||||||||| |||||||||| ||| |||| |||||||||||| ||||||||| |||||    
T  12857873 ttgcgtaccagtcaaagcaaacaccttgccacctgtcagagccttcttaggcttcctgcactacgagctaatatgaccttcttcatcacaattgtagcaa 12857774  T
Q  205 acaatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccct 304  Q
    ||||||||||  |||||||| || |||||  | || |||||||| |||||| |||| ||||| |||||||||   |  || ||||||||| |||||||||    
T  12857773 acaatatcacgacgcttgcactcagctattatgtgtcctttctttccacatcggaaacacttcttctcatcacagtcacatacattactcatgtggccct 12857674  T
Q  305 tctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcagga 399  Q
    | |||||||||||| | || ||||||||||||||  ||||||| || ||||| ||||| |||||||||   | |||||| |||||||||||||||    
T  12857673 tttcaccacacttgaaacagacaatctcagtaggagcatctctccttttaggcctcctctcatcattcagtccttgtttacctttgtcagcagga 12857579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 74 - 369
Target Start/End: Complemental strand, 2037320 - 2037025
Alignment:
Q  74 tacctctgataagtcggtcctcattaactgtatgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaact 173  Q
    |||||| ||| || || ||||||||  |||| || ||||| || || ||||||||  ||||||  | |||| |||||||||| ||| |||||||||||||    
T  2037320 tacctcagatcagacgatcctcattcgctgtctgagtaccagctaaagcaaacactcttccactcgcctgacccttcttaggcttcttgcactgcgaact 2037221  T
Q  174 aagatgaccttcttcgtcacaattgaagcaaacaatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctca 273  Q
    |||||||||||| || ||||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||||||||| |||||||||| |||||     
T  2037220 aagatgaccttcctcatcacaattgaaacaaacaatatcaccacgcttgcattcagctattgtatgccctttcttcccacatcggaagcacttcttctcc 2037121  T
Q  274 tcaacattgcagacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatca 369  Q
    ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||| |||||||||||||| ||||||    
T  2037120 tcaccattgcaaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatca 2037025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 74 - 369
Target Start/End: Complemental strand, 2041061 - 2040766
Alignment:
Q  74 tacctctgataagtcggtcctcattaactgtatgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaact 173  Q
    |||||| ||| || || ||||||||  |||| || ||||| || || ||||||||  ||||||  | |||| |||||||||| ||| |||||||||||||    
T  2041061 tacctcagatcagacgatcctcattcgctgtctgagtaccagctaaagcaaacactcttccactcgcctgacccttcttaggcttcttgcactgcgaact 2040962  T
Q  174 aagatgaccttcttcgtcacaattgaagcaaacaatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctca 273  Q
    |||||||||||| || ||||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||||||||| |||||||||| |||||     
T  2040961 aagatgaccttcctcatcacaattgaaacaaacaatatcaccacgcttgcattcagctattgtatgccctttcttcccacatcggaagcacttcttctcc 2040862  T
Q  274 tcaacattgcagacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatca 369  Q
    ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||| |||||||||||||| ||||||    
T  2040861 tcaccattgcaaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatca 2040766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 74 - 369
Target Start/End: Original strand, 14039467 - 14039762
Alignment:
Q  74 tacctctgataagtcggtcctcattaactgtatgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaact 173  Q
    |||||| ||| || || ||||||||  |||| || ||||| || || ||||||||  ||||||  | |||| |||||||||| ||| |||||||||||||    
T  14039467 tacctcagatcagacgatcctcattcgctgtctgagtaccagctaaagcaaacactcttccactcgcctgacccttcttaggcttcttgcactgcgaact 14039566  T
Q  174 aagatgaccttcttcgtcacaattgaagcaaacaatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctca 273  Q
    |||||||||||| || ||||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||||||||| |||||||||| |||||     
T  14039567 aagatgaccttcctcatcacaattgaaacaaacaatatcaccacgcttgcattcagctattgtatgccctttcttcccacatcggaagcacttcttctcc 14039666  T
Q  274 tcaacattgcagacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatca 369  Q
    ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||| |||||||||||||| ||||||    
T  14039667 tcaccattgcaaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatca 14039762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 121 - 415
Target Start/End: Complemental strand, 15008942 - 15008651
Alignment:
Q  121 gcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaacaatatcaccgcgct 220  Q
    ||||||||| |||||| ||  |||||||||||||| ||| ||||||||||||||||||| |||||||| ||||| ||||| |||||||||||||| ||||    
T  15008942 gcaaacacccttccacttgcttgagccttcttaggattcttgcactgcgaactaagatggccttcttcatcacatttgaaacaaacaatatcaccacgct 15008843  T
Q  221 tgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttctcaccacacttgta 320  Q
    ||||||| |||||||||||||| ||||| |||||| ||||||||   ||||| ||| ||||||| |||||||||||||||||  ||||||||||||||||    
T  15008842 tgcattcagctatcgtatgccccttctttccacatcggaagcac---ttctcctcaccattgcaaacattactcttgtggcctctctcaccacacttgta 15008746  T
Q  321 gcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcaggaccattgtagggcttcg 415  Q
    |||||||||||||| ||| |||||||| |||||||||||||| ||||||||| | ||||| |  ||||||||| || || || ||||||||||||    
T  15008745 gcaaacaatctcagcaggaacatctctcctcttaggtctcctctcatcattcaatctttgctctcctttgtcaacatgagcactgtagggcttcg 15008651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 5 - 399
Target Start/End: Complemental strand, 14291009 - 14290615
Alignment:
Q  5 cagcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgt 104  Q
    |||||||||||||||| ||| ||| | | || ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  14291009 cagcaatgaaacaatgagtagcactagtgtctataatagcaattaaatgagtactattaaagaaacaagtacctctgataagtcggtcctcattcacggt 14290910  T
Q  105 atgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaa 204  Q
     || ||||| | ||| ||||||||||| ||||||||| || |||||||||| ||| |||||||||| |||| ||| || ||||| ||||||||  |||||    
T  14290909 ttgcgtaccagtcaaagcaaacaccttgccacctgtccgaaccttcttaggcttcttgcactgcgagctaatatgtccctcttcatcacaattatagcaa 14290810  T
Q  205 acaatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccct 304  Q
    | || ||| || ||||| || || ||||  || || |||||||  |||||    |||||||| ||||||||   ||  || ||||||||||||||||| |    
T  14290809 ataacatccccacgcttacaatcagctaaagtgtgtcctttctgtccacacctaaagcacttcttctcatctcaatcacacacattactcttgtggcctt 14290710  T
Q  305 tctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcagga 399  Q
    |||||||||||||| |||||| ||||||||||||  ||||||| |||||||| ||||| |||||||||   || ||||| |||||||||||||||    
T  14290709 tctcaccacacttgaagcaaataatctcagtaggagcatctctcctcttaggcctcctctcatcattcagcctctgtttacctttgtcagcagga 14290615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 11 - 399
Target Start/End: Original strand, 35982839 - 35983227
Alignment:
Q  11 tgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatgtgt 110  Q
    |||||||||| |||  |||| |||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| || || || ||    
T  35982839 tgaaacaatgagtagtaccagtatctataatagcaattaaaagagtactattaaagaaacaagtatctctgataagtcggtcctcattcaccgtttgcgt 35982938  T
Q  111 acctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaacaata 210  Q
    | | | ||| ||||||||||| |||||||||  | |||||||||| | | | || |||||||||| ||| ||||| || | ||| ||| |||||||||||    
T  35982939 aacagtcaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacaatgcgaactaatatgtccttcctcattacagttgtagcaaacaata 35983038  T
Q  211 tcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttctcac 310  Q
    || || |||||||| || || |  || || |||||||  ||||||  ||| ||||| ||||||||    |  || ||||||||||||||||| |||||||    
T  35983039 tccccacgcttgcaatcagccaatgtgtgtcctttctgtccacatctgaaacacttcttctcatctcggtcacacacattactcttgtggcctttctcac 35983138  T
Q  311 cacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcagga 399  Q
    |||||||| |||||| |||| |||||||  ||||||| |||||||| ||||| |||||||||   || ||||| |||||||||||||||    
T  35983139 cacacttgaagcaaataatcacagtaggagcatctctcctcttaggcctcctctcatcattcagcctctgtttacctttgtcagcagga 35983227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 5 - 368
Target Start/End: Complemental strand, 16825758 - 16825393
Alignment:
Q  5 cagcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactat--taaagaaacaagtacctctgataagtcggtcctcattaact 102  Q
    |||||||||||||||| ||| ||| | |||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||| ||     
T  16825758 cagcaatgaaacaatgagtagcactagtatctataatagcaattaaaggagtactatattaaagaaacaagtacctctgataagtcagtcctcattcacc 16825659  T
Q  103 gtatgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagc 202  Q
    || || ||||| | ||| ||||||||||| |||||||||  | |||||||||| | | | |||||| |||| | ||||||||| || |   | ||| |||    
T  16825658 gtttgcgtaccagtcaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactgcaaactgatatgaccttcctcattgaagttgtagc 16825559  T
Q  203 aaacaatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcc 302  Q
    ||||||| || || ||||| || || ||||  || || ||||| || |||||   ||||||||| |||||||||   |  || |||||||||||||||||    
T  16825558 aaacaatgtccccacgcttacaatcagctaaagtgtgtccttttttaccacacctgaagcacttcttctcatcacggtcacaaacattactcttgtggcc 16825459  T
Q  303 cttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatc 368  Q
     || |||||||||||| | |||||||| ||||||||  |||||||  |||| || ||||| |||||    
T  16825458 tttttcaccacacttgaaacaaacaatatcagtaggagcatctctcatcttgggcctcctctcatc 16825393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 6 - 369
Target Start/End: Original strand, 28756972 - 28757335
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| |||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||     
T  28756972 agcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaggagtc 28757071  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    || ||||| | ||| |||||||||||||| ||  |   || |||||| || |     ||||| ||||||| |||||||||| | |  |||||| | || |    
T  28757072 tgcgtaccagtcaaagcaaacacctttcccccaattctagtcttcttcggctcaggacactgtgaactaatatgaccttctccattgcaattgtaacaga 28757171  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    |||| || || ||||||||||| ||||   | || || ||||  |||||   |||||||||  | |||||       || ||||||||||||||||| ||    
T  28757172 caatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggccttt 28757271  T
Q  306 ctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatca 369  Q
    ||||||||||||||||||||||||||||  |||  ||||||| ||||| || ||||| ||||||    
T  28757272 ctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatca 28757335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 6 - 399
Target Start/End: Complemental strand, 11958657 - 11958264
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| ||||| | || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    ||     
T  11958657 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggattactattaaagaaacaagtacctctgataagtcggtcctcattggtagtc 11958558  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    || ||||| | |||||||||||| || ||||| |||  ||||||||| || |   | ||||  ||||| | ||||| ||||||||  || ||| |||| |    
T  11958557 tgcgtaccagtcaatgcaaacactttcccaccggtcctagccttcttcggctgagtacactatgaactgatatgactttcttcgttgcagttgtagcaga 11958458  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    |||| ||  | ||||| ||||| ||||  ||||| |||||||  |||||   ||| |||||  |||||||   |   ||  |||| || |||||||| ||    
T  11958457 caatgtcctcacgcttacattcagctagtgtatgtcctttctgaccacacctgaaacacttcctctcatctctaccacaagcattgcttttgtggccttt 11958358  T
Q  306 ctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcagga 399  Q
     ||||||||||| || |||||||| |||| |||  ||||||| |||||| | ||||| |||||||||   || |||||||||||||||||||||    
T  11958357 ttcaccacacttataacaaacaatttcagcaggagcatctctcctcttaagcctcctatcatcattcattctctgtttccctttgtcagcagga 11958264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 6 - 437
Target Start/End: Complemental strand, 31692661 - 31692230
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||   ||     
T  31692661 agcaatgaaacaatgagtagcaccaatatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctcactagtggtt 31692562  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    || ||||| | ||  ||||||||||| ||||| |||  | ||||||| || | | | ||||| ||||| | ||| || || || |  || ||  | ||||    
T  31692561 tgcgtaccagtcagagcaaacaccttaccaccagtcctaaccttcttcggctgcgtacactgtgaactgatatggccctcctcattgcagttataacaaa 31692462  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    ||| |||||| | |||||| || ||||  || || || ||||  |||||   ||| ||||| ||||||||     | || ||||||||||||||||| ||    
T  31692461 caacatcaccactcttgcagtcagctagagtgtgtcccttctaaccacacctgaaacacttcttctcatctttggtacaaacattactcttgtggccttt 31692362  T
Q  306 ctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactt-tgtttccctttgtcagcaggaccatt 404  Q
    ||||||||||||||| ||||| ||||||| ||   ||| ||| || || || ||||| ||||||||| ||||| || |||||||||||||||||| || |    
T  31692361 ctcaccacacttgtaacaaacgatctcagcagaagcatttctcctattgggcctcctctcatcattc-aacttctgcttccctttgtcagcaggagcact 31692263  T
Q  405 gtagggcttcgaacaaccttgctggcctttgct 437  Q
     || ||||||| || ||  ||||| ||||||||    
T  31692262 atacggcttcggacgactctgctgtcctttgct 31692230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 6 - 137
Target Start/End: Original strand, 10408621 - 10408752
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| |||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||   ||     
T  10408621 agcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagttggtcctcattaggagtc 10408720  T
Q  106 tgtgtacctgccaatgcaaacacctttccacc 137  Q
    || ||||| | ||| |||||||||||||||||    
T  10408721 tgcgtaccagtcaaagcaaacacctttccacc 10408752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 6 - 328
Target Start/End: Complemental strand, 10417521 - 10417199
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||||||| ||||  | || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    ||     
T  10417521 agcaatgaaacaatgtgtagcaccggtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctcattggtagtc 10417422  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctg-tctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaa 204  Q
    || ||||| | ||| ||||| || ||||| || | ||||| |||||||||| | |  ||||||||||||||  ||||| || ||  |||| || || |||    
T  10417421 tgcgtaccagtcaaagcaaatacttttcctccagttctga-ccttcttaggttgcgggcactgcgaactaatgtgaccctcatcaccacagttaaaacaa 10417323  T
Q  205 acaatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccct 304  Q
    |||||||| || |||||||| ||||| | |  ||| |||||||  || |||  ||| || || ||||||||   | ||||  ||||||||||||||||||    
T  10417322 acaatatctccacgcttgcaatccgccaacacatgacctttctgaccgcatctgaaacatttcttctcatcttgagtgcaagcattactcttgtggccct 10417223  T
Q  305 tctcaccacacttgtagcaaacaa 328  Q
    || ||||||| ||||| |||||||    
T  10417222 tcacaccacatttgtaacaaacaa 10417199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 6 - 137
Target Start/End: Complemental strand, 16327185 - 16327054
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    ||     
T  16327185 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctaataagtcggtcctcattggtagtc 16327086  T
Q  106 tgtgtacctgccaatgcaaacacctttccacc 137  Q
    || ||||| | |||||||||||||||||||||    
T  16327085 tgcgtaccagtcaatgcaaacacctttccacc 16327054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 6 - 372
Target Start/End: Complemental strand, 12358003 - 12357637
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| ||| | | || ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||   ||     
T  12358003 agcaatgaaacaatgagtagcactagtgtctataatagcaattaaaggtgtactattaaagaaacaagtacctctgataagtcgatcctcactagtggtt 12357904  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    || ||||| | ||  |||||||| || ||||| |||  | ||||||| || |   | ||||||||||| | ||||||||| || |  || ||  ||||||    
T  12357903 tgcgtaccagtcagagcaaacactttaccaccggtcctaaccttcttcggttgtgtacactgcgaactgatatgaccttcctcattgcagttatagcaaa 12357804  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    |||  || || ||||| || || ||||  || || |||||||  |||||   ||||||||| ||||||||   ||  |||||||||||||||||||| ||    
T  12357803 caacgtctccccgcttacaatcagctaatgtgtgtcctttctgaccacacctgaagcacttcttctcatctttatcacagacattactcttgtggccttt 12357704  T
Q  306 ctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattc 372  Q
     || ||||||||||||||||||||||||| |||   |||||| ||||| || ||||| |||||||||    
T  12357703 ttcgccacacttgtagcaaacaatctcagcaggagtatctctcctcttgggcctcctctcatcattc 12357637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 121 - 314
Target Start/End: Complemental strand, 13028717 - 13028524
Alignment:
Q  121 gcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaacaatatcaccgcgct 220  Q
    ||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||| ||| ||||| || |  || ||||| || ||||||||  |  | |    
T  13028717 gcaaacacctttccacctgcctgagccttcttaggcttcttgcactgcgaactaatatgtccttcctctttgcagttgaaacacacaatatcctcatggt 13028618  T
Q  221 tgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttctcaccaca 314  Q
    | |||||||||||||||||||| |||||  ||||| |||||||||| ||||  ||| ||||||| ||||||||||||||||| ||||| |||||    
T  13028617 tacattccgctatcgtatgccccttcttggcacatcggaagcacttcttcttttcaccattgcaaacattactcttgtggcctttctctccaca 13028524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 6 - 371
Target Start/End: Original strand, 17494300 - 17494664
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| ||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||| |||  ||     
T  17494300 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagcatgtcctcactaatggtt 17494399  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    || ||||| | ||  |||||||| || ||||| |||  | ||||||| || |   | ||||||||||||| ||||||||| ||||  || ||  ||||||    
T  17494400 tgcgtaccagtcagagcaaacactttaccaccggtcctaaccttcttcggttgagtacactgcgaactaatatgaccttcctcgttgcagttatagcaaa 17494499  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    |||| || || | ||| || || ||||  || || |||||||  |||||   | ||||||| ||||||||   ||  || ||||||||||||||||| ||    
T  17494500 caatgtctccacacttacagtcagctagtgtgtgtcctttctgaccacacctg-agcacttcttctcatctctatcacaaacattactcttgtggccttt 17494598  T
Q  306 ctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcatt 371  Q
     |||||||| ||| ||||||||||||||||| |  ||||||| ||||| || ||||| ||||||||    
T  17494599 ttcaccacatttgaagcaaacaatctcagtatgagcatctctcctcttgggcctcctctcatcatt 17494664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 6 - 98
Target Start/End: Complemental strand, 12509959 - 12509867
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatt 98  Q
    |||||| |||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12509959 agcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatt 12509867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 6 - 137
Target Start/End: Complemental strand, 16832004 - 16831873
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| ||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||   ||     
T  16832004 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagacggtcctcattagtagtc 16831905  T
Q  106 tgtgtacctgccaatgcaaacacctttccacc 137  Q
    || ||||| | ||| |||||||||||||||||    
T  16831904 tgcgtaccagtcaaagcaaacacctttccacc 16831873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 6 - 137
Target Start/End: Original strand, 47126597 - 47126728
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| |||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||   ||     
T  47126597 agcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcgttaggagtc 47126696  T
Q  106 tgtgtacctgccaatgcaaacacctttccacc 137  Q
    || ||||| | ||| ||||||||||| |||||    
T  47126697 tgcgtaccagtcaaagcaaacaccttaccacc 47126728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 6 - 399
Target Start/End: Original strand, 31941556 - 31941949
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||||||| |||| ||| || || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||   ||     
T  31941556 agcaatgaaaaaatgagtagcatcagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctcactagtggtt 31941655  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    || ||||| | ||| ||||||||||| ||||| |||  | ||||||| || | | | ||||  ||||| | ||| || || || |  |||||  | ||||    
T  31941656 tgcgtaccagtcaaagcaaacaccttaccaccagtcctaaccttcttcggctgcgtacactatgaactgatatggccctcctcattgcaattataacaaa 31941755  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    ||| |||||| |||||||| || ||||  || || || ||||  |||||   ||| ||||| ||||||||     | || ||||||||||||||||| ||    
T  31941756 caacatcaccacgcttgcagtcagctagagtgtgtcccttctgaccacacctgaaacacttcttctcatctttggtacaaacattactcttgtggccttt 31941855  T
Q  306 ctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactt-tgtttccctttgtcagcagga 399  Q
    ||| ||||||||||| ||||| ||||||| |||  ||| ||| || || || ||||| ||||||||| ||||| || ||||||||||||||||||    
T  31941856 ctcgccacacttgtaacaaacgatctcagcaggagcatttctcctattgggcctcctctcatcattc-aacttctgcttccctttgtcagcagga 31941949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 6 - 371
Target Start/End: Original strand, 12180997 - 12181362
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| ||||| | || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||   ||     
T  12180997 agcaatgaaacaatgagtagcaccagtgtctataatagcaactaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcactagtggtt 12181096  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    |  ||||| | ||| |||||||| || ||||| |||  | ||||||| || | | | |||| |||||| | ||||||||| | ||  |||||  | ||||    
T  12181097 tacgtaccagtcaaagcaaacactttaccaccggtcctaaccttcttcggttgcgtacactacgaactgatatgaccttccttgttgcaattataacaaa 12181196  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    |||| || ||  |||| || || ||||  || || ||||||   |||||   ||||||||| ||||||||   ||  ||||| |||||||||||||| ||    
T  12181197 caatgtccccaagcttacaatcagctagtgtgtgtcctttccgaccacaactgaagcacttcttctcatctctatcacagactttactcttgtggccttt 12181296  T
Q  306 ctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcatt 371  Q
     |||||||||||| |||||| ||| ||||||||  ||||||| ||||| |  ||||| ||||||||    
T  12181297 ttcaccacacttgaagcaaaaaatgtcagtaggagcatctctcctcttggtcctcctctcatcatt 12181362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 6 - 137
Target Start/End: Complemental strand, 8744866 - 8744735
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| ||||| | || ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| | ||     
T  8744866 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgatgagacggtcctcattagcagtc 8744767  T
Q  106 tgtgtacctgccaatgcaaacacctttccacc 137  Q
    |||||||| | ||| ||||| || ||||||||    
T  8744766 tgtgtaccagtcaaagcaaaaacttttccacc 8744735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 6 - 137
Target Start/End: Complemental strand, 13318010 - 13317879
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| ||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||   ||     
T  13318010 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagacggtcctcattagtagtc 13317911  T
Q  106 tgtgtacctgccaatgcaaacacctttccacc 137  Q
    || ||||| | ||| |||||||| ||||||||    
T  13317910 tgcgtaccagtcaaagcaaacacttttccacc 13317879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 6 - 137
Target Start/End: Original strand, 13944677 - 13944808
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| ||||| | || ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| | ||     
T  13944677 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgatgagacggtcctcattagcagtc 13944776  T
Q  106 tgtgtacctgccaatgcaaacacctttccacc 137  Q
    |||||||| | ||| ||||| || ||||||||    
T  13944777 tgtgtaccagtcaaagcaaaaacttttccacc 13944808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 6 - 96
Target Start/End: Complemental strand, 11949401 - 11949311
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctca 96  Q
    ||||||||||||||| ||| ||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  11949401 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagttgatcctca 11949311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 6 - 99
Target Start/End: Complemental strand, 16378410 - 16378317
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatta 99  Q
    ||||||||||||||| ||| ||||| | || || |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  16378410 agcaatgaaacaatgagtagcaccagtgtctatgatagcaattaaaggagtactattaaagaaacaagcacctctgataagacggtcctcatta 16378317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 6 - 99
Target Start/End: Original strand, 17189027 - 17189120
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatta 99  Q
    ||||||||||||||| ||| ||||  | || |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  17189027 agcaatgaaacaatgagtagcacccgtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagcctgtcctcatta 17189120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 24189957 - 24190046
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctc 95  Q
    ||||||||||||||| ||| ||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  24189957 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagcctgtcctc 24190046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 6 - 96
Target Start/End: Complemental strand, 18131822 - 18131733
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctca 96  Q
    ||||||||||||||| ||| |||||   || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18131822 agcaatgaaacaatgagtagcaccagg-tctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctca 18131733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 15013250 - 15013038
Alignment:
Q  1 tcagcagcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaa 100  Q
    |||||| |||| ||| |||||||||||| | |||| ||||||| |||||||||||| ||||||| |||||| ||||||||||| || || ||||||||      
T  15013250 tcagcaacaataaaaaaatgtgtaacactagtatctataatagtaattaaaggagtgctattaatgaaacatgtacctctgattagacgatcctcattcg 15013151  T
Q  101 ctgtatgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaa 200  Q
    |||| || ||||| || || ||||||||||| ||||  | | || | |||||||||||| | ||||| |  |||| ||  ||||||||  |||| || ||    
T  15013150 ctgtctgagtaccagctaaagcaaacaccttcccactagacggaactttcttagggttcttacactgagggctaatatatccttcttctccacagttaaa 15013051  T
Q  201 gcaaacaatatca 213  Q
    |||||| ||||||    
T  15013050 gcaaactatatca 15013038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 286 - 369
Target Start/End: Original strand, 47126877 - 47126960
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatca 369  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||  |||  ||||||| ||||| || ||||| ||||||    
T  47126877 acattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatca 47126960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 286 - 399
Target Start/End: Complemental strand, 18131543 - 18131430
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttcc 385  Q
    ||||||||||||||||| ||||| ||||||||||||||| ||||||||  |||  ||||||| ||||| || ||||| |||| ||||   || ||||| |    
T  18131543 acattactcttgtggcctttctcgccacacttgtagcaatcaatctcaacaggagcatctctcctcttgggcctcctctcattattcagtctctgttttc 18131444  T
Q  386 ctttgtcagcagga 399  Q
    ||||||||||||||    
T  18131443 ctttgtcagcagga 18131430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 15262273 - 15262350
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||||||| ||||| ||||||||||||||| |||||| ||||||| |||  |||| |||||||||||    
T  15262273 agcaataaaacaatgtgtagcaccagtatcaataatagcaactaaaggtgtactatcaaaataacatgtacctctgat 15262350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 121 - 188
Target Start/End: Complemental strand, 2247215 - 2247148
Alignment:
Q  121 gcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttc 188  Q
    ||||| ||||| ||||| ||||| ||||||||||| ||| ||||||||||||||| ||||||||||||    
T  2247215 gcaaaaaccttcccaccagtctgggccttcttaggcttcttgcactgcgaactaatatgaccttcttc 2247148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 286 - 369
Target Start/End: Original strand, 10408901 - 10408984
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatca 369  Q
    ||||||||||||||||| ||||||||||| ||||| |||||||||||||  ||  ||||||| ||||| || ||||| ||||||    
T  10408901 acattactcttgtggcctttctcaccacatttgtaacaaacaatctcagctggagcatctctcctcttgggcctcctatcatca 10408984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 12272993 - 12273047
Alignment:
Q  8 caatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactatt 62  Q
    ||||||||||||| ||| ||||| |||| ||||||||||||||||||||||||||    
T  12272993 caatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactatt 12273047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 281 - 415
Target Start/End: Complemental strand, 13317770 - 13317636
Alignment:
Q  281 tgcagacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttg 380  Q
    |||| |||||||| |||||||| ||  ||||||||||||| |||||||  |||  |||  ||||||| | | |||| ||||| ||||||||  |  ||||    
T  13317770 tgcaaacattacttttgtggccttttgcaccacacttgtaacaaacaacatcaacaggagcatctctccccctaggcctcctctcatcatttaatatttg 13317671  T
Q  381 tttccctttgtcagcaggaccattgtagggcttcg 415  Q
    ||| ||||||||||||||| || ||||||||||||    
T  13317670 ttttcctttgtcagcaggagcactgtagggcttcg 13317636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 14874055 - 14873997
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaa 64  Q
    |||||| |||||||||||  ||||||||||||||||||||| |||||||||| ||||||    
T  14874055 agcaataaaacaatgtgttgcaccaatatcaataatagcaactaaaggagtattattaa 14873997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 3688586 - 3688663
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  3688586 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 3688663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 10008243 - 10008320
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  10008243 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 10008320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 10908853 - 10908930
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  10908853 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 10908930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 12843590 - 12843513
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| ||||||  |||||| |||  ||||||||||||||||    
T  12843590 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggtatactatcaaaataacaagtacctctgat 12843513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 12889352 - 12889429
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  12889352 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 12889429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 13255333 - 13255410
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  13255333 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 13255410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 15345732 - 15345655
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  15345732 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 15345655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 15358726 - 15358803
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  15358726 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 15358803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 15586879 - 15586802
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  15586879 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 15586802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 15713543 - 15713466
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  15713543 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 15713466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 43165318 - 43165395
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  43165318 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 43165395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 48428090 - 48428167
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  48428090 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 48428167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 26 - 113
Target Start/End: Original strand, 11861037 - 11861124
Alignment:
Q  26 caccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatgtgtacc 113  Q
    ||||| ||||||||||||||| |||||||||| ||||||   |||||||||||||||| |  || ||||||||  |||| ||||||||    
T  11861037 caccagtatcaataatagcaactaaaggagtattattaatataacaagtacctctgatcaagcgatcctcattctctgtctgtgtacc 11861124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 26790898 - 26790823
Alignment:
Q  8 caatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  26790898 caataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 26790823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 5422417 - 5422359
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaa 64  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||    
T  5422417 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaa 5422359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 6603378 - 6603455
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| || ||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  6603378 agcaataaagcaatgggtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 6603455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 15400004 - 15399927
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| |||||||||||||||  ||||||||| ||||||   | ||||||||||||||    
T  15400004 agcaataaaacaatgcgtagcaccagtatcaataatagcaaccaaaggagtattattaatatagcaagtacctctgat 15399927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 16638416 - 16638493
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| || ||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  16638416 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 16638493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 16754188 - 16754111
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| || ||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  16754188 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 16754111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 16804434 - 16804357
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| || ||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   ||||||||| ||||||    
T  16804434 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatataacaagtacatctgat 16804357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 20059541 - 20059464
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| || ||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  20059541 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 20059464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 23079504 - 23079427
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||||||  ||| | ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  23079504 agcaataaaacaatgtgttgcacaagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 23079427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 24185833 - 24185910
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| || ||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  24185833 agcaataaagcaatgagtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 24185910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 53382505 - 53382428
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| || ||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  53382505 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 53382428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 289 - 413
Target Start/End: Original strand, 19727686 - 19727810
Alignment:
Q  289 ttactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctt 388  Q
    |||||||| ||||| |||||||||||  | |||||||||||||||| |   |||||| |  | ||||| ||||| ||||||||| | |||||||| || |    
T  19727686 ttactcttatggcctttctcaccacaagtatagcaaacaatctcagcaacaacatctttctttttaggcctcctctcatcattcaatctttgtttgccct 19727785  T
Q  389 tgtcagcaggaccattgtagggctt 413  Q
    | ||||||||| || |||| |||||    
T  19727786 tatcagcaggagcactgtaaggctt 19727810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 399
Target Start/End: Complemental strand, 16326905 - 16326790
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaa-tctcagtaggcaca-tctcttctcttaggtctcctttcatcattctaactttgttt 383  Q
    ||||| ||||||||||| || ||||||||||| || ||||||| |||||| |||  || ||||| ||||| |||||||| |||||||||    |||| ||    
T  16326905 acattgctcttgtggcctttttcaccacacttataacaaacaagtctcagcaggagcagtctctcctcttgggtctcctatcatcattcaccttttgctt 16326806  T
Q  384 ccctttgtcagcagga 399  Q
     |||||||||||||||    
T  16326805 tcctttgtcagcagga 16326790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 15065714 - 15065772
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaa 64  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||| ||||| ||||||    
T  15065714 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaatgagtattattaa 15065772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 15944071 - 15944026
Alignment:
Q  17 aatgtgtaacaccaatatcaataatagcaattaaaggagtactatt 62  Q
    |||| ||| |||||||||||||||| ||||| ||||||||||||||    
T  15944071 aatgagtagcaccaatatcaataattgcaatcaaaggagtactatt 15944026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 371
Target Start/End: Complemental strand, 16831724 - 16831639
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcatt 371  Q
    ||||||||||||||||| ||||| ||||||||  | ||||| ||||||| |||  ||||||| || || || ||||| ||||||||    
T  16831724 acattactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcctattcggcctcctctcatcatt 16831639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 118
Target Start/End: Original strand, 16694807 - 16694919
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| || ||||| ||| ||||| ||||||||||| ||| ||| |||||| ||||||   | |||||||||||||| |  || ||||||||  |||||    
T  16694807 agcaataaagcaatgcgtagcaccagtatcaataataacaactaagggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgta 16694906  T
Q  106 tgtgtacctgcca 118  Q
    || ||||| ||||    
T  16694907 tgagtaccagcca 16694919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 260; Significance: 1e-145; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 8 - 435
Target Start/End: Complemental strand, 200717 - 200299
Alignment:
Q  8 caatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatg 107  Q
    ||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  200717 caatgaaacaatgtgtagcactagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaaccgtctg 200618  T
Q  108 tgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaaca 207  Q
     ||||| | ||         |||||||||||| |||| || ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  200617 cgtaccagtca---------cctttccacctgcctgaaccctcttaggcttcttgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaaca 200527  T
Q  208 atatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttct 307  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||| ||||||||||||||||||||||    
T  200526 atatcaccacgcttgcattccgctatcgtatgccctttcttcccacatcggaagcacttcttctcatcaccattgcaaacattactcttgtggcccttct 200427  T
Q  308 caccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcaggaccattgta 407  Q
    |||||||||||||||||||||||||| |||| || |||||||||||||||||||| ||||||||| | ||||  ||||||||||||||| || || |||     
T  200426 caccacacttgtagcaaacaatctcattaggaacttctcttctcttaggtctcctctcatcattcaatctttacttccctttgtcagcaagagcaatgtc 200327  T
Q  408 gggcttcgaacaaccttgctggcctttg 435  Q
    |||||||| |  ||||||||| ||||||    
T  200326 gggcttcggaagaccttgctgacctttg 200299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 6 - 372
Target Start/End: Original strand, 325760 - 326125
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| ||||| | || ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||   ||     
T  325760 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtaatattaaagaaacaagtacctctgataagtcgatcctcactagtggtt 325859  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    || ||||| | ||| |||||||| || ||||| ||   | ||||||| || |   ||||||| ||||| | ||| || ||||| |  || ||  | ||||    
T  325860 tgcgtaccagtcaaagcaaacactttaccaccggttctaaccttctttggttgtgtgcactgtgaactgatatggccctcttcattgcagttataacaaa 325959  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    ||| ||| || ||||| || |  ||||  || || |||||||  ||||| | ||||||||| ||||||||   ||  |||||||||||||||||| | ||    
T  325960 caacatctccccgcttacaattagctaatgtgtgtcctttctgaccacacttgaagcacttcttctcatctttatcacagacattactcttgtggtcttt 326059  T
Q  306 ctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattc 372  Q
    ||| ||||||||||||||||||||||||| |||  ||||||| || || || ||||| |||||||||    
T  326060 ctcgccacacttgtagcaaacaatctcagcaggagcatctctcctatt-ggcctcctctcatcattc 326125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 258 - 372
Target Start/End: Original strand, 319548 - 319662
Alignment:
Q  258 gaagcactttttctcatcaacattgcagacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggt 357  Q
    ||||||||| ||||||||   ||  |||||||||||||||||||| ||||| ||||||||||||||||||||| ||| |||  ||||||| || || ||     
T  319548 gaagcacttcttctcatctttatcacagacattactcttgtggcctttctcgccacacttgtagcaaacaatcccagcaggagcatctctcctattgggc 319647  T
Q  358 ctcctttcatcattc 372  Q
    ||||| |||||||||    
T  319648 ctcctctcatcattc 319662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 258; Significance: 1e-143; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 6 - 343
Target Start/End: Original strand, 11881 - 12218
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||||||| |||||   || ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||     
T  11881 agcaatgaaacaatgtgtagcaccatggtctataatagcaattaaaggagtactattaaagaaacaagtatctctaataagtcggtcctcattaattgtc 11980  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    || ||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11981 tgcgtaccagtcaatgcaaacacctttccacctgtctgagccttcttaggcttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 12080  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||  |||||||||||||||||||    
T  12081 caatatcaccacgcttgcattccgctatcgtatgccctttcttcccacatcgaaagcactttttctcatcaccattgcaagcattactcttgtggccctt 12180  T
Q  306 ctcaccacacttgtagcaaacaatctcagtaggcacat 343  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  12181 ctcaccacacttgtagcaaacaatctcagtaggaacat 12218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 242; Significance: 1e-134; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 5 - 432
Target Start/End: Complemental strand, 4141 - 3717
Alignment:
Q  5 cagcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgt 104  Q
    |||||||||||||| ||||| ||||| | ||||||||||||||||   |||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  4141 cagcaatgaaacaaagtgtagcaccagtgtcaataatagcaatta---gagtactattaaagaaacaagtacctcttataagtcggtcctcattaaccgt 4045  T
Q  105 atgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaa 204  Q
     |||||||| | ||||||||||||||||||||||||||||||||||||||| ||| |||| |||||  |||||||||||||||  |||||||||||| ||    
T  4044 ctgtgtaccggtcaatgcaaacacctttccacctgtctgagccttcttaggcttcatgcattgcgagttaagatgaccttctttatcacaattgaagtaa 3945  T
Q  205 acaatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccct 304  Q
    ||||||||||| ||||||||||| ||||||| |||||| ||||| |||||| |||||||||| ||||| ||| ||||||||||||||||||||||||||     
T  3944 acaatatcaccacgcttgcattcagctatcgcatgccccttctttccacatcggaagcacttcttctcctcaccattgcagacattactcttgtggcccc 3845  T
Q  305 tctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcaggaccatt 404  Q
    |||| ||||||||||||||||||||||||  ||  |||||||| |||||||||||||| ||||||||| | ||||||||||| |||||||||||| || |    
T  3844 tctcgccacacttgtagcaaacaatctcaacagaaacatctctcctcttaggtctcctctcatcattcaatctttgtttccccttgtcagcaggagcact 3745  T
Q  405 gtagggcttcgaacaaccttgctggcct 432  Q
     |||||||| | || |||||||||||||    
T  3744 atagggcttaggacgaccttgctggcct 3717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 8030 - 7972
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaa 64  Q
    |||||| || ||||| ||| ||||| ||||||||||||||| |||||||||| ||||||    
T  8030 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaa 7972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 204; Significance: 1e-111; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 121 - 428
Target Start/End: Original strand, 28350645 - 28350952
Alignment:
Q  121 gcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaacaatatcaccgcgct 220  Q
    ||||||||| |||||| || ||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  28350645 gcaaacacccttccacttgcctgagccttcttaggcttcttgcactgcgaactgagatgaccttcttcgtcacaattgaagcaaacaatatcaccacgct 28350744  T
Q  221 tgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttctcaccacacttgta 320  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||    
T  28350745 tgcattcagctatcgtatgccctttcttcccacatcggaagcactttttctcatcaccattgcaaacattactcttgtggcctttctcaccacacttgta 28350844  T
Q  321 gcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcaggaccattgtagggcttcgaacaa 420  Q
    |||||||||||||| ||| |||||||| |||||||||||||| ||||||||| | ||||| | |||||||||| ||||| || | |||||||||| || |    
T  28350845 gcaaacaatctcagcaggaacatctctcctcttaggtctcctctcatcattcaatctttgctcccctttgtcaacaggagcactatagggcttcggacga 28350944  T
Q  421 ccttgctg 428  Q
    ||||||||    
T  28350945 ccttgctg 28350952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 180 - 435
Target Start/End: Original strand, 21901366 - 21901621
Alignment:
Q  180 accttcttcgtcacaattgaagcaaacaatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaaca 279  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  21901366 accttcttcgtcacaattgaagcaaacaatatcaccacgcttgcattcagctatcgtatgccctttcttcccacatcggaagcactttttctcatcacca 21901465  T
Q  280 ttgcagacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaacttt 379  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| | || |    
T  21901466 ttgcaaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggaacatctcttctcttaggtctcctctcatcattcaatctct 21901565  T
Q  380 gtttccctttgtcagcaggaccattgtagggcttcgaacaaccttgctggcctttg 435  Q
    |||||||||||||||||||| || |||||||||||| |  |||||| |||||||||    
T  21901566 gtttccctttgtcagcaggagcactgtagggcttcggatgaccttgatggcctttg 21901621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 8 - 227
Target Start/End: Original strand, 23113380 - 23113598
Alignment:
Q  8 caatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatg 107  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||  ||    
T  23113380 caatgaaacaatgtgtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctttgataagtcg-tcctcaataactgcctg 23113478  T
Q  108 tgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaaca 207  Q
    ||| || | ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  23113479 tgttccagtcaatgcaaacacctttccacctgtctgagccttcttaggcttcctgcactgcgagctaagatgaccttattcgtcacaattgaagcaaaca 23113578  T
Q  208 atatcaccgcgcttgcattc 227  Q
    |||||||| |||||||||||    
T  23113579 atatcaccacgcttgcattc 23113598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 6 - 372
Target Start/End: Complemental strand, 19716805 - 19716439
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||   ||     
T  19716805 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctttgataagtcggtcctcactagtagtc 19716706  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    || ||||| | |||||||||||| || ||||| ||   | ||||||| || |   ||||||||||||| | ||| || |||| ||  || ||  | ||||    
T  19716705 tgcgtaccagtcaatgcaaacactttcccaccggttctaaccttcttcggctgtgtgcactgcgaactgatatggccctctttgttgcagttataacaaa 19716606  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    ||| |||||  |||||||| || ||||  || || |||||||  |||||   ||| ||||| ||||||||   | | || ||||||||||||||||| ||    
T  19716605 caacatcactacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttcttctcatctttagtacaaacattactcttgtggccttt 19716506  T
Q  306 ctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattc 372  Q
    ||| ||||||||||| ||||| ||||||| |||  ||||||| || || || ||||| |||||||||    
T  19716505 ctcgccacacttgtaacaaacgatctcagcaggagcatctctcctattgggcctcctctcatcattc 19716439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 9 - 372
Target Start/End: Complemental strand, 19721365 - 19721002
Alignment:
Q  9 aatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatgt 108  Q
    |||||||||||| ||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||   || ||     
T  19721365 aatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctttgataagtcggtcctcactagtagtctgc 19721266  T
Q  109 gtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaacaa 208  Q
    ||||| | |||||||||||| || ||||| ||   | ||||||| || |   ||||||||||||| | ||| || |||| ||  || ||  | |||||||    
T  19721265 gtaccagtcaatgcaaacactttcccaccggttctaaccttcttcggctgtgtgcactgcgaactgatatggccctctttgttgcagttataacaaacaa 19721166  T
Q  209 tatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttctc 308  Q
     |||||  |||||||| || ||||  || || |||||||  |||||   ||| ||||| ||||||||   | | || ||||||||||||||||| |||||    
T  19721165 catcactacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttcttctcatctttagtacaaacattactcttgtggcctttctc 19721066  T
Q  309 accacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattc 372  Q
     ||||||||||| ||||| ||||||| |||  ||||||| || || || ||||| |||||||||    
T  19721065 gccacacttgtaacaaacgatctcagcaggagcatctctcctattgggcctcctctcatcattc 19721002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 6 - 137
Target Start/End: Original strand, 20848244 - 20848375
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| |||||||| ||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||     
T  20848244 agcaataaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaggagtc 20848343  T
Q  106 tgtgtacctgccaatgcaaacacctttccacc 137  Q
    || ||||| | ||| |||||||||||||||||    
T  20848344 tgcgtaccagtcaaagcaaacacctttccacc 20848375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 6 - 371
Target Start/End: Original strand, 23274248 - 23274613
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| ||||  | || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||   ||     
T  23274248 agcaatgaaacaatgagtagcaccggtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctcactagtggtt 23274347  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    ||  |||| | ||  |||||||| || ||||| |||  | ||||||| || |   ||||||| ||||| | ||| || || || |  || ||  ||||||    
T  23274348 tgcataccagtcagagcaaacactttaccaccagtcctaaccttcttcggttgtgtgcactgtgaactgatatggccctcctcattgcagttatagcaaa 23274447  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    | || || || ||||| || || ||||  || || || ||||  |||||   ||||||||| ||||||||   | | || ||||||||||||||||| ||    
T  23274448 ctatgtctccccgcttacaatcagctaatgtgtgtcccttctgtccacacctgaagcacttcttctcatctttagtacaaacattactcttgtggccttt 23274547  T
Q  306 ctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcatt 371  Q
    |||||||||||||| ||||||||| ||||||||  ||||||| ||||| || ||||| ||||||||    
T  23274548 ctcaccacacttgttgcaaacaatttcagtaggagcatctctcctcttgggcctcctctcatcatt 23274613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 6 - 137
Target Start/End: Original strand, 12577008 - 12577139
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| ||||| | || |||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||| | ||     
T  12577008 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggaatactattaaagaaacaagtacctctgatgaggcggtcctcattagcagtc 12577107  T
Q  106 tgtgtacctgccaatgcaaacacctttccacc 137  Q
    |||||||| | ||| ||||| || ||||||||    
T  12577108 tgtgtaccagtcaaagcaaaaacttttccacc 12577139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 6 - 137
Target Start/End: Complemental strand, 23097806 - 23097675
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| ||||| | || |||||||||||||||||||||||||||||||| ||||||||||| ||||| | ||||||||||   ||     
T  23097806 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaatcaagtacctcttataagcctgtcctcattagtagtc 23097707  T
Q  106 tgtgtacctgccaatgcaaacacctttccacc 137  Q
    || ||||| | ||| ||||||||||| |||||    
T  23097706 tgcgtaccagtcaaagcaaacaccttcccacc 23097675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 30208713 - 30208601
Alignment:
Q  1 tcagcagcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaa 100  Q
    ||||||||||| |||||||||||| ||||| |||| ||||||| |||||| ||||||||||||| |||||| |||||| |||| ||  | |||||||| |    
T  30208713 tcagcagcaataaaacaatgtgtagcaccagtatctataatagtaattaagggagtactattaatgaaacatgtacctttgatcagatgatcctcattca 30208614  T
Q  101 ctgtatgtgtacc 113  Q
    |||| || |||||    
T  30208613 ctgtctgagtacc 30208601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 6 - 337
Target Start/End: Complemental strand, 24817628 - 24817297
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| |||||||| ||| ||||| ||||||||||| ||| |||||||||||| | |||   ||| |||||||| || | ||| ||||||||  || |     
T  24817628 agcaataaaacaatgcgtagcaccagtatcaataatatcaactaaaggagtactttcaaaatgacatgtacctctaatcaatcgatcctcattctctatc 24817529  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    |||||||| | ||| ||||||||  | | |   ||||| ||||||||||| ||| |||| || |||| || ||||||||| || |  || || || || |    
T  24817528 tgtgtaccagtcaaagcaaacactctcctagtggtctgcgccttcttaggcttcttgcattgtgaaccaatatgaccttcctcattgcagttaaaacaca 24817429  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    ||| ||||    |||| ||||| |  || |||||||| ||||| |||||  ||||||||  |||| ||||  || | ||  |||||||||||||||||||    
T  24817428 caacatcataatgcttacattctgtaatagtatgccccttcttaccacaacggaagcaccgtttcacatctccagtacaagcattactcttgtggccctt 24817329  T
Q  306 ctcaccacacttgtagcaaacaatctcagtag 337  Q
    |||||||||  | |||||||||||||||||||    
T  24817328 ctcaccacaagtatagcaaacaatctcagtag 24817297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 19817500 - 19817594
Alignment:
Q  4 gcagcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatt 98  Q
    |||||||| || ||||||||| ||||| ||||  || ||| |||||| ||||||||||||| |||||| ||||||||||| || || ||||||||    
T  19817500 gcagcaataaagcaatgtgtagcaccagtatctgtagtagtaattaagggagtactattaatgaaacatgtacctctgatcagacgatcctcatt 19817594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 9338237 - 9338314
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  9338237 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 9338314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 9486871 - 9486948
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  9486871 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 9486948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 10871505 - 10871582
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  10871505 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 10871582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 16983895 - 16983972
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  16983895 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 16983972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 17001655 - 17001732
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  17001655 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 17001732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 22323130 - 22323053
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  22323130 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 22323053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 24265025 - 24265102
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  24265025 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 24265102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 24705270 - 24705193
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||| ||| |||||||||| ||||||   ||||||||||||||||    
T  24705270 agcaataaaacaatgcgtagcaccagtatcaataatatcaactaaaggagtattattaatataacaagtacctctgat 24705193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 24712689 - 24712766
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  24712689 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 24712766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 44383358 - 44383281
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  44383358 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 44383281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 118
Target Start/End: Complemental strand, 11351499 - 11351387
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||| ||||| ||||||   | |||||||||||||| |  || ||||||||  ||||     
T  11351499 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaatgagtattattaatatagcaagtacctctgatcaagcgatcctcattctctgtc 11351400  T
Q  106 tgtgtacctgcca 118  Q
    |||||||| ||||    
T  11351399 tgtgtaccagcca 11351387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 98
Target Start/End: Complemental strand, 21323054 - 21322962
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatt 98  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||| ||   |||| ||||||||||| || || ||||||||    
T  21323054 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattatcaatataacatgtacctctgattaggcgatcctcatt 21322962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 98
Target Start/End: Complemental strand, 45673800 - 45673708
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatt 98  Q
    |||||| |||||||| ||| | ||| ||||||||||||||| |||||||||| ||||||   | |||||||||||||| | ||| ||||||||    
T  45673800 agcaataaaacaatgcgtagctccattatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaatcgatcctcatt 45673708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 286 - 333
Target Start/End: Original strand, 20848524 - 20848570
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctca 333  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  20848524 acattactcttgtggcctttctcaccacacttgtagc-aacaatctca 20848570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 21142829 - 21142771
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaa 64  Q
    |||||| || ||||| ||| ||||||||||||||||||||| |||||||||| ||||||    
T  21142829 agcaataaagcaatgcgtagcaccaatatcaataatagcaactaaaggagtattattaa 21142771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 80
Target Start/End: Original strand, 27220671 - 27220745
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctct 80  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | |||||||||||    
T  27220671 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctct 27220745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 27373924 - 27373982
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaa 64  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||    
T  27373924 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaa 27373982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 332
Target Start/End: Complemental strand, 22462989 - 22462943
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctc 332  Q
    ||||||||||||||||| ||||||||||| ||| | |||||||||||    
T  22462989 acattactcttgtggcctttctcaccacagttgaaacaaacaatctc 22462943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 23029249 - 23029191
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaa 64  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| ||| |||||| ||||||    
T  23029249 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaagggagtattattaa 23029191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 22742754 - 22742677
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| || |||||||||||| |||||||||| ||| ||   |||| |||||||||||    
T  22742754 agcaataaaacaatgcgtagcaccagtaccaataatagcaactaaaggagtattatcaatataacatgtacctctgat 22742677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 23065068 - 23065145
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||| | ||| ||| ||   ||||||||||||||||    
T  23065068 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaatgtgtattatcaatataacaagtacctctgat 23065145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 23074518 - 23074595
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||| | ||| ||| ||   ||||||||||||||||    
T  23074518 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaatgtgtattatcaatataacaagtacctctgat 23074595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 24874538 - 24874461
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| || ||||| ||| ||||| |||||||||||| || |||||||||| ||||||   | ||||||||||||||    
T  24874538 agcaataaagcaatgcgtagcaccagtatcaataatagaaactaaaggagtattattaatatagcaagtacctctgat 24874461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 22280780 - 22280840
Alignment:
Q  26 caccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataag 86  Q
    ||||| |||||||||| ||||| |||||||||||||| |  |||||  |||||||||||||    
T  22280780 caccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctctgataag 22280840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 17 - 85
Target Start/End: Complemental strand, 22739431 - 22739363
Alignment:
Q  17 aatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataa 85  Q
    |||| ||| ||||| |||||||||| ||||| |||||||||||||| |  |||||  ||||||||||||    
T  22739431 aatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctctgataa 22739363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 203; Significance: 1e-111; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 141 - 435
Target Start/End: Original strand, 8708836 - 8709130
Alignment:
Q  141 ctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaacaatatcaccgcgcttgcattccgctatcgtatgc 240  Q
    ||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8708836 ctgagccttcttaggcttcttgcactgcgaactaagatggccttcttcgtcacaattgaagcaaacaatatcaccacgcttgcattccgctatcgtatgc 8708935  T
Q  241 cctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggca 340  Q
    ||||||||||||||| |||||||||| || |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |    
T  8708936 cctttcttcccacatcggaagcacttcttttcatcaccattgcaaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggaa 8709035  T
Q  341 catctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcaggaccattgtagggcttcgaacaaccttgctggcctttg 435  Q
    ||||| |||||||||||||||| ||||||||| | ||||| |||||||||||||||||| || | ||| |||||| || ||||||||| ||||||    
T  8709036 catctattctcttaggtctcctctcatcattcaatctttgcttccctttgtcagcaggagcactatagagcttcggacgaccttgctgacctttg 8709130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 121 - 428
Target Start/End: Original strand, 13879248 - 13879555
Alignment:
Q  121 gcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaacaatatcaccgcgct 220  Q
    ||||||||| |||||| ||  |||| ||||||||| ||| | ||||| ||||| ||||||||||||||||||||||||||||||||||||| ||| ||||    
T  13879248 gcaaacacccttccacttgcttgagtcttcttaggcttcttacactgtgaactgagatgaccttcttcgtcacaattgaagcaaacaatatgaccacgct 13879347  T
Q  221 tgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttctcaccacacttgta 320  Q
    ||||||| ||||||||||| || ||||| |||||| |||||||||| ||||| ||| ||||||| |||||||||||||||||||||||||||||||||||    
T  13879348 tgcattcagctatcgtatggcccttctttccacatcggaagcacttcttctcctcatcattgcatacattactcttgtggcccttctcaccacacttgta 13879447  T
Q  321 gcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcaggaccattgtagggcttcgaacaa 420  Q
     ||||||||||||||||  ||||||||||||||||||||||| ||||||||| | ||||| | |||||||||| ||||| || |||||||||||| || |    
T  13879448 acaaacaatctcagtagaaacatctcttctcttaggtctcctctcatcattcaatctttgctaccctttgtcatcaggagcactgtagggcttcggacga 13879547  T
Q  421 ccttgctg 428  Q
    ||||||||    
T  13879548 ccttgctg 13879555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 5 - 399
Target Start/End: Original strand, 15073382 - 15073776
Alignment:
Q  5 cagcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgt 104  Q
    |||||||||||||||| ||| ||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||    
T  15073382 cagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagtcggtcctcattaacagt 15073481  T
Q  105 atgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaa 204  Q
     |||||||| | ||| | ||||||||| ||||||||| ||||||||||||| ||||||||||| || || | |||||||||||| ||||||||  |||||    
T  15073482 ttgtgtaccagtcaaagaaaacaccttgccacctgtcagagccttcttaggcttcctgcactgtgagcttatatgaccttcttcatcacaattatagcaa 15073581  T
Q  205 acaatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccct 304  Q
    |||| |||||   ||||||| || ||||  || || |||||||| |||||    || ||||| |||||||||   |  || ||||||||||||||||| |    
T  15073582 acaacatcacaaagcttgcaatcagctaatgtgtgtcctttctttccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggcctt 15073681  T
Q  305 tctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcagga 399  Q
    | |||||||||||| | || ||||||||||||||  ||||||| ||| |||| ||||| |||||||||   || |||||  ||||||||||||||    
T  15073682 tttcaccacacttgaaacagacaatctcagtaggagcatctctcctcctaggcctcctctcatcattcagtctctgtttaactttgtcagcagga 15073776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 32 - 398
Target Start/End: Complemental strand, 14993589 - 14993223
Alignment:
Q  32 tatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatgtgtacctgccaatgcaaacacctt 131  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||   ||| |||||||||||    
T  14993589 tatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattcactgtttgcgtaccattcaaagcaaacacctt 14993490  T
Q  132 tccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaacaatatcaccgcgcttgcattccgct 231  Q
     |||||||||  | |||||||||| | | | ||||||||||| | ||||||||| || |  || ||| ||||||||| ||| ||  ||||||| || |||    
T  14993489 gccacctgtcctaaccttcttaggttgcgtacactgcgaactgatatgaccttcctcattgcagttgtagcaaacaacatccccatgcttgcaatcagct 14993390  T
Q  232 atcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttctcaccacacttgtagcaaacaatct 331  Q
    |  || || |||||||  |||||   ||||||||| ||||  |||   |  || ||||||||||||||||| || |||||||||||| | |||||||| |    
T  14993389 aaagtgtgtcctttctgaccacacctgaagcacttcttcttctcacggtcacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatat 14993290  T
Q  332 cagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcagg 398  Q
    |||||||  ||||||| ||||| || ||||| ||||||||| | || || || || |||||||||||    
T  14993289 cagtaggagcatctctcctcttgggcctcctctcatcattcaatctctgcttacccttgtcagcagg 14993223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 6 - 436
Target Start/End: Original strand, 16150660 - 16151090
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| ||||| |||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||| ||   ||     
T  16150660 agcaatgaaacaatgagtagcaccagtatctataatagcaactaaaggagtactattaaagaaacaagtacatctgataagtcgatcctcactagtggtc 16150759  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    |  ||||| | |||||||||||| || ||||| ||   | ||||||| || ||| |||| ||||| |||| ||| || ||||| ||||| ||  ||||||    
T  16150760 tacgtaccagtcaatgcaaacactttcccaccggttctaaccttcttcggtttcttgcattgcgagctaatatgcccctcttcatcacagttatagcaaa 16150859  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    ||| |||||| |||||||| || ||||  || || |||||||  |||||   ||||||||| ||||||||   | | || ||||||||||||||||| ||    
T  16150860 caacatcaccacgcttgcaatcagctagtgtgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaacattactcttgtggccttt 16150959  T
Q  306 ctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactt-tgtttccctttgtcagcaggaccatt 404  Q
    ||| |||||||| ||||||||||| |||  |||  ||||||| ||||| || ||||| ||||||||| ||||| || || |||||||||| |||| || |    
T  16150960 ctcgccacacttatagcaaacaatatcaacaggagcatctctcctcttgggcctcctctcatcattc-aacttctgctttcctttgtcagtaggagcact 16151058  T
Q  405 gtagggcttcgaacaaccttgctggcctttgc 436  Q
     || ||||||| || ||  ||||| |||||||    
T  16151059 atacggcttcggacgactctgctgtcctttgc 16151090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 6 - 436
Target Start/End: Original strand, 16154806 - 16155236
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| ||||| |||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||| ||   ||     
T  16154806 agcaatgaaacaatgagtagcaccagtatctataatagcaactaaaggagtactattaaagaaacaagtacatctgataagtcgatcctcactagtggtc 16154905  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    |  ||||| | |||||||||||| || ||||| ||   | ||||||| || ||| |||| ||||| |||| ||| || ||||| ||||| ||  ||||||    
T  16154906 tacgtaccagtcaatgcaaacactttcccaccggttctaaccttcttcggtttcttgcattgcgagctaatatgcccctcttcatcacagttatagcaaa 16155005  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    ||| |||||| |||||||| || ||||  || || |||||||  |||||   ||||||||| ||||||||   | | || ||||||||||||||||| ||    
T  16155006 caacatcaccacgcttgcaatcagctagtgtgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaacattactcttgtggccttt 16155105  T
Q  306 ctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactt-tgtttccctttgtcagcaggaccatt 404  Q
    ||| |||||||| ||||||||||| |||  |||  ||||||| ||||| || ||||| ||||||||| ||||| || || |||||||||| |||| || |    
T  16155106 ctcgccacacttatagcaaacaatatcaacaggagcatctctcctcttgggcctcctctcatcattc-aacttctgctttcctttgtcagtaggagcact 16155204  T
Q  405 gtagggcttcgaacaaccttgctggcctttgc 436  Q
     || ||||||| || ||  ||||| |||||||    
T  16155205 atacggcttcggacgactctgctgtcctttgc 16155236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 6 - 415
Target Start/End: Original strand, 27903409 - 27903818
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| ||||| | || ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    ||     
T  27903409 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacatgtacctctgataagtcgatcctcattggtagtc 27903508  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctg-tctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaa 204  Q
    || ||||| | ||| ||||| || ||||| |  | ||||| |||||||||| | | ||||||| |||||||  |  || || || | ||| ||  | |||    
T  27903509 tgcgtaccagtcaaagcaaatacttttcctcaagttctga-ccttcttaggttgcgtgcactgtgaactaatgttgccctcctcattacagttataacaa 27903607  T
Q  205 acaatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccct 304  Q
    |||||||| || ||||||||||| || | |  ||| |||||||  ||||||  ||| ||||| ||||||||     |||||||||||||||||||||| |    
T  27903608 acaatatctccacgcttgcattcagccaacacatgacctttctgaccacatctgaaacacttcttctcatctttggtgcagacattactcttgtggcctt 27903707  T
Q  305 tctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcaggaccatt 404  Q
    || ||||||||||||| |||||||  |||  |||  ||||||| | | |||| | ||| ||||||||| | |||||||| ||||||||||||||| ||||    
T  27903708 tcgcaccacacttgtaacaaacaacatcaacaggagcatctctccccctaggccgcctctcatcattcaatctttgttttcctttgtcagcaggaacatt 27903807  T
Q  405 gtagggcttcg 415  Q
    |||||||||||    
T  27903808 gtagggcttcg 27903818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 6 - 372
Target Start/End: Original strand, 20893055 - 20893421
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||     
T  20893055 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattggtagtc 20893154  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    || ||||| | ||| ||||||||||||||||| ||   | ||||||| || |   | ||||||||||| | ||| || ||||| |  || ||| || | |    
T  20893155 tgcgtaccagtcaaagcaaacacctttccaccagttctaaccttcttcggctcagtacactgcgaactgatatgcccctcttcattgcagttgtagtaga 20893254  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    ||||||| || ||||||||||| ||||   | || || ||||  |||||   |||||||||  |||||||   |   || ||||| ||||||| ||| ||    
T  20893255 caatatccccacgcttgcattcagctaaattgtgtcccttctgaccacacctgaagcacttcctctcatctctaccacaaacattgctcttgttgccttt 20893354  T
Q  306 ctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattc 372  Q
     |||||||||||||| ||||||||||||| |||  ||||||| |||||||| ||||| |||||||||    
T  20893355 ttcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggcctcctatcatcattc 20893421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 6 - 137
Target Start/End: Complemental strand, 3262042 - 3261911
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| |||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||     
T  3262042 agcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaggagtc 3261943  T
Q  106 tgtgtacctgccaatgcaaacacctttccacc 137  Q
    || ||||| | ||| |||||||||||||||||    
T  3261942 tgcgtaccagtcaaagcaaacacctttccacc 3261911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 6 - 369
Target Start/End: Original strand, 7357291 - 7357654
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| |||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||     
T  7357291 agcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattggtagtc 7357390  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    |||||||| | ||||||||||||||| ||||  ||   ||||||||| || |     ||||| ||||||| |||||| ||| | |  || ||| |||| |    
T  7357391 tgtgtaccagtcaatgcaaacaccttcccactagttctagccttcttcggctcaggacactgtgaactaatatgaccctctccattgcagttgtagcaga 7357490  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    |||| || || ||||||||||| ||||   | || || ||||  |||||   |||||||||  |||||||   |    | ||||| ||||||||||| ||    
T  7357491 caatgtctccacgcttgcattcagctaaattgtgacccttctgaccacacctgaagcacttcctctcatctttaccataaacattgctcttgtggccttt 7357590  T
Q  306 ctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatca 369  Q
    |||||||| |||||| ||||||||||||| |||  ||||||| ||||| || ||||| ||||||    
T  7357591 ctcaccactcttgtaacaaacaatctcagcaggagcatctctcctcttgggcctcctatcatca 7357654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 6 - 372
Target Start/End: Complemental strand, 11204480 - 11204114
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| |||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||     
T  11204480 agcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattggtagtn 11204381  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    || ||||| | ||| ||||||||||| ||||| ||   |||||| || || |     ||||| ||||| | |||||| ||| | |  |||||| |||| |    
T  11204380 tgcgtaccagtcaaagcaaacaccttcccaccagttctagcctttttcggctcaggacactgtgaactgatatgaccctctccattgcaattgtagcaga 11204281  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    ||||||| || ||||||||||  ||||   | || || ||||  |||||   |||||| ||| | |||||   |   || ||||| ||||||||||| ||    
T  11204280 caatatccccacgcttgcattaagctagactgtgacccttctgaccacacctgaagcattttctatcatctctaccacaaacattgctcttgtggccttt 11204181  T
Q  306 ctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattc 372  Q
    |||||||||||| || ||||||||||||| |||  ||||||| ||||| |||||||| |||||||||    
T  11204180 ctcaccacacttataacaaacaatctcagaaggagcatctctcctcttgggtctcctatcatcattc 11204114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 6 - 367
Target Start/End: Complemental strand, 44659114 - 44658753
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| |||||||| ||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||     
T  44659114 agcaataaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaggagtc 44659015  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctg-cactgcgaactaagatgaccttcttcgtcacaattgaagcaa 204  Q
    || |||||   ||| ||||||||||||||||| ||   || ||||||  |||||  | ||||| ||||||| ||||| |||| | |  |||||| | ||     
T  44659014 tgcgtaccattcaaagcaaacacctttccaccagttctagtcttctt-cggttcaggacactgtgaactaatatgacattctccattgcaattgtaacag 44658916  T
Q  205 acaatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccct 304  Q
    |||||||| || ||||||||||| ||||   | || || ||||  |||||   |||||||||  | |||||       || ||||||||||||||||| |    
T  44658915 acaatatccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctt 44658816  T
Q  305 tctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcat 367  Q
    |||||||||||||||||||||||||||||  |||  ||||||| ||||| || ||||| ||||    
T  44658815 tctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcat 44658753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 6 - 134
Target Start/End: Complemental strand, 29450785 - 29450657
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| |||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||     
T  29450785 agcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaggagtc 29450686  T
Q  106 tgtgtacctgccaatgcaaacacctttcc 134  Q
    || ||||| | ||| ||||||||||||||    
T  29450685 tgcgtaccagtcaaagcaaacacctttcc 29450657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 8 - 371
Target Start/End: Original strand, 15266802 - 15267165
Alignment:
Q  8 caatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatg 107  Q
    ||||||||||||| |||  |||| | || |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||| ||  ||| ||    
T  15266802 caatgaaacaatgagtagtaccagtgtctataatagcaattaaaggagtactattaaagaaacaactacctctgataagtctgtcttcactagttgtttg 15266901  T
Q  108 tgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaaca 207  Q
     ||||  |  || ||||||||||| ||||| |||  | ||||||| || | | | |||| |||||| | ||||||||||||||  || ||  ||||||||    
T  15266902 cgtactggttaaagcaaacaccttgccaccggtcctaaccttcttcggctgcgtacactacgaactgatatgaccttcttcgttgcagttatagcaaaca 15267001  T
Q  208 atatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttct 307  Q
    || || ||  |||| || || ||||  || || |||||||  |||||   ||||||||| ||||||||    |  || ||||||||||| ||||||||||    
T  15267002 atgtctccatgcttacaatcagctagagtgtgtcctttctgaccacacctgaagcacttcttctcatctctgtcacaaacattactcttatggcccttct 15267101  T
Q  308 caccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcatt 371  Q
    || |||||||| |||||||||| |  |||||  ||||||| ||||| || ||||| ||||||||    
T  15267102 catcacacttgaagcaaacaatattcgtaggagcatctctcctcttgggcctcctctcatcatt 15267165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 6 - 137
Target Start/End: Complemental strand, 51604040 - 51603909
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| ||||| | || ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| | ||     
T  51604040 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgatgagacggtcctcattagcagtc 51603941  T
Q  106 tgtgtacctgccaatgcaaacacctttccacc 137  Q
    |||||||| | ||| ||||| || ||||||||    
T  51603940 tgtgtaccagtcaaagcaaaaacttttccacc 51603909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 6 - 137
Target Start/End: Complemental strand, 53750718 - 53750587
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| ||||| | || ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| | ||     
T  53750718 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgatgagacggtcctcattagcagtc 53750619  T
Q  106 tgtgtacctgccaatgcaaacacctttccacc 137  Q
    |||||||| | ||| ||||| || ||||||||    
T  53750618 tgtgtaccagtcaaagcaaaaacttttccacc 53750587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 6 - 334
Target Start/End: Original strand, 14697125 - 14697453
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| |||||||||||| ||||| |||||||||||||||||||||||||||||| |||| |||| |||||| | || |  || ||||||||  ||||     
T  14697125 agcaataaaacaatgtgtagcaccagtatcaataatagcaattaaaggagtactatcaaagtaacatgtacctataatcaaacgatcctcattctctgtt 14697224  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    || ||||| | ||| ||||||||  | ||||  ||||||| ||||||||| ||| |||| || || | || |||||||||||| |  |||||||| || |    
T  14697225 tgcgtaccagtcaaagcaaacactctaccactagtctgagtcttcttaggtttcttgcattgtgacccaatatgaccttcttcattgcaattgaaacaca 14697324  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
      | |||| || |||| ||||  || || |||||||| ||||| || || ||||| |||  ||||  |||  ||   ||  |||||||||| ||||| ||    
T  14697325 gcacatcatcgtgcttacattttgcaatagtatgccccttcttaccgcaatggaaacaccgtttcaaatccccaagacaagcattactcttatggccttt 14697424  T
Q  306 ctcaccacacttgtagcaaacaatctcag 334  Q
    |||||||||  | ||||||||||||||||    
T  14697425 ctcaccacaagtatagcaaacaatctcag 14697453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 15354291 - 15354234
Alignment:
Q  39 aatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctca 96  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15354291 aatatcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctca 15354234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 286 - 369
Target Start/End: Complemental strand, 29450505 - 29450422
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatca 369  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||  |||  ||||||| |||||||| ||||| ||||||    
T  29450505 acattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttaggcctcctatcatca 29450422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 286 - 369
Target Start/End: Complemental strand, 3261762 - 3261679
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatca 369  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||  |||  ||||||| ||||| || ||||| ||||||    
T  3261762 acattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatca 3261679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 16219212 - 16219289
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| ||||| |||||| ||||||||||||||||||||| |||||| ||||||| |||  |||| |||||||||||    
T  16219212 agcaataaaacagtgtgtagcaccaatatcaataatagcaactaaaggtgtactatcaaaataacatgtacctctgat 16219289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 16222532 - 16222609
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| ||||| |||||| ||||||||||||||||||||| |||||| ||||||| |||  |||| |||||||||||    
T  16222532 agcaataaaacagtgtgtagcaccaatatcaataatagcaactaaaggtgtactatcaaaataacatgtacctctgat 16222609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 16023 - 15946
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| ||| |||| ||| ||||| ||||||||||||||| |||||| ||||||| |||  ||||||||||||||||    
T  16023 agcaataaaaaaatgcgtagcaccagtatcaataatagcaactaaaggtgtactatcaaaataacaagtacctctgat 15946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 8050611 - 8050534
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  8050611 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 8050534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 8389436 - 8389513
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  8389436 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 8389513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 12479624 - 12479701
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  12479624 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 12479701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 13513374 - 13513451
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| || ||||||||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  13513374 agcaataaagcaatgtgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 13513451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 14300967 - 14300890
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  14300967 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 14300890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 16233980 - 16233903
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  16233980 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 16233903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 17092137 - 17092060
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  17092137 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 17092060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 19635160 - 19635237
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  19635160 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 19635237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 19775781 - 19775704
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  19775781 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 19775704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 23958771 - 23958848
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  23958771 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 23958848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 27714360 - 27714437
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  27714360 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 27714437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 125
Target Start/End: Complemental strand, 16350542 - 16350423
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| ||||||||  || ||| | ||||||||||||||| |||||||||| ||||||   |||||||||||||||| |  || ||||||||  | ||     
T  16350542 agcaataaaacaatgcatagcactagtatcaataatagcaactaaaggagtattattaatataacaagtacctctgatcaagcgatcctcattctcggtc 16350443  T
Q  106 tgtgtacctgccaatgcaaa 125  Q
    |||||||| ||||| |||||    
T  16350442 tgtgtaccagccaaagcaaa 16350423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 18224434 - 18224376
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaa 64  Q
    |||||| || ||||||||| ||||| ||||||||||||||| |||||||||| ||||||    
T  18224434 agcaataaagcaatgtgtagcaccagtatcaataatagcaactaaaggagtattattaa 18224376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 14683591 - 14683668
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| || ||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  14683591 agcaataaagcaatgagtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 14683668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 286 - 371
Target Start/End: Original strand, 18259745 - 18259830
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcatt 371  Q
    ||||||||||||||||| || |||||||||||  |||||||||| | ||||||  ||||| | ||||| || ||||| ||||||||    
T  18259745 acattactcttgtggcctttttcaccacacttaaagcaaacaatattagtaggagcatctgtcctcttgggcctcctctcatcatt 18259830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 40476064 - 40476141
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| || ||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  40476064 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 40476141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 14162494 - 14162571
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||| ||| ||| ||||  ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  14162494 agcaataaaactatgcgtagcaccggtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 14162571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 18604797 - 18604733
Alignment:
Q  16 caatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctct 80  Q
    ||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | |||||||||||    
T  18604797 caatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctct 18604733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 173; Significance: 7e-93; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 7 - 399
Target Start/End: Original strand, 29581 - 29973
Alignment:
Q  7 gcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtat 106  Q
    |||||||||||||| ||| ||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |    
T  29581 gcaatgaaacaatgagtagcactagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaacagttt 29680  T
Q  107 gtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaac 206  Q
    | ||||| | ||  ||||||||||| ||||||||| ||||||||||||| |||||||||||||| |||| |||||||||||| ||||||||| |||||||    
T  29681 gcgtaccagtcagagcaaacaccttgccacctgtcagagccttcttaggcttcctgcactgcgagctaatatgaccttcttcatcacaattgtagcaaac 29780  T
Q  207 aatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttc 306  Q
    || |||||| |||||||| || ||||| || || |||||| |||||||  |||| ||||| |||||||||   || || ||||||||||||||||||||     
T  29781 aacatcaccacgcttgcactcagctattgtgtgtcctttcgtcccacaccggaaacacttcttctcatcatggttacaaacattactcttgtggcccttt 29880  T
Q  307 tcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcagga 399  Q
    |||||||||||| |  | || |||||| ||||  ||||||| ||| |||| ||||| |||||||||   || || || |||||||||||||||    
T  29881 tcaccacacttgaaatagactatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctctgcttacctttgtcagcagga 29973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 164; Significance: 2e-87; HSPs: 2)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 121 - 372
Target Start/End: Original strand, 1107 - 1358
Alignment:
Q  121 gcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaacaatatcaccgcgct 220  Q
    ||||||||| |||||| || ||||||||||||||| ||| | ||||| ||||| |||||||||| |||||||||||||||||||||||||||||| ||||    
T  1107 gcaaacacccttccacttgcctgagccttcttaggcttcttacactgtgaactgagatgaccttattcgtcacaattgaagcaaacaatatcaccacgct 1206  T
Q  221 tgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttctcaccacacttgta 320  Q
    ||||||| |||||||||||||| ||||| |||||| |||||||||| ||||| ||| ||||||| |||||||||||||||||||||||||||||||||||    
T  1207 tgcattcagctatcgtatgccccttctttccacatcggaagcacttcttctcctcaccattgcaaacattactcttgtggcccttctcaccacacttgta 1306  T
Q  321 gcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattc 372  Q
     ||||||||||||||||| ||||| ||||||||||||||||| |||||||||    
T  1307 acaaacaatctcagtaggaacatcccttctcttaggtctcctctcatcattc 1358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609; HSP #2
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 300 - 428
Target Start/End: Original strand, 7904 - 8032
Alignment:
Q  300 gcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcagga 399  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||| ||||||||| | || || |  ||||||||| |||||    
T  7904 gcccttctcaccacacttgtaacaaacaatctcagtaggaacatcccttctcttaggtctcctctcatcattcaatctctgctctcctttgtcaacagga 8003  T
Q  400 ccattgtagggcttcgaacaaccttgctg 428  Q
     || |||||||||||| || |||||||||    
T  8004 gcactgtagggcttcggacgaccttgctg 8032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 147; Significance: 2e-77; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 5 - 347
Target Start/End: Complemental strand, 4341 - 3999
Alignment:
Q  5 cagcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgt 104  Q
    |||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  4341 cagcaatgaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaaccgt 4242  T
Q  105 atgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaa 204  Q
       |||||| | ||||| |||||||||||||| |||||||||||||||||| |||||| | ||||| ||||||||||||||||| ||||||||||| ||     
T  4241 ccatgtaccggtcaatgaaaacacctttccacttgtctgagccttcttaggcttcctggattgcgagctaagatgaccttcttcatcacaattgaaacag 4142  T
Q  205 acaatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccct 304  Q
    ||||| || ||  | ||||| || ||||| || || | ||||||||||||  |||| ||| | |||||||||   |  || |||||||||||||  ||||    
T  4141 acaatgtctccatgtttgcactcagctattgtgtgtcttttcttcccacacaggaaacacatcttctcatcacggtcacatacattactcttgtttccct 4042  T
Q  305 tctcaccacacttgtagcaaacaatctcagtaggcacatctct 347  Q
    | |||||| ||||| | || ||||||||||||||  |||||||    
T  4041 tttcaccaaacttgaaacagacaatctcagtaggagcatctct 3999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0865 (Bit Score: 145; Significance: 4e-76; HSPs: 1)
Name: scaffold0865
Description:

Target: scaffold0865; HSP #1
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 8 - 372
Target Start/End: Complemental strand, 1521 - 1157
Alignment:
Q  8 caatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatg 107  Q
    ||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   || |     
T  1521 caatgaaacaatgtgtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattagtagtttt 1422  T
Q  108 tgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaaca 207  Q
     ||||| | ||| ||||||||||| ||||||||| ||||||||||||| ||||||||||| || |||| |||||| ||||| ||||||||| |||| |||    
T  1421 cgtaccagtcaaagcaaacaccttgccacctgtcagagccttcttaggcttcctgcactgagagctaatatgaccctcttcatcacaattgtagcacaca 1322  T
Q  208 atatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttct 307  Q
    |||||||| ||||| || || || |  || || ||||||||||||||| |||| ||||| |||||||||   |  || ||||||| ||||||||| || |    
T  1321 atatcaccacgcttacactcagccaatgtgtgtcctttcttcccacatcggaaacacttcttctcatcacggtcacatacattacccttgtggccttttt 1222  T
Q  308 caccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattc 372  Q
    ||||||| ||  | || ||||||| ||||||  ||||||| ||| |||| ||||| |||||||||    
T  1221 caccacatttaaaacagacaatcttagtaggagcatctctcctcctaggcctcctctcatcattc 1157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 145; Significance: 4e-76; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 8 - 372
Target Start/End: Complemental strand, 28534 - 28170
Alignment:
Q  8 caatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatg 107  Q
    ||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   || |     
T  28534 caatgaaacaatgtgtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattagtagtttt 28435  T
Q  108 tgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaaca 207  Q
     ||||| | ||| ||||||||||| ||||||||| ||||||||||||| ||||||||||| || |||| |||||| ||||| ||||||||| |||| |||    
T  28434 cgtaccagtcaaagcaaacaccttgccacctgtcagagccttcttaggcttcctgcactgagagctaatatgaccctcttcatcacaattgtagcacaca 28335  T
Q  208 atatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttct 307  Q
    |||||||| ||||| || || || |  || || ||||||||||||||| |||| ||||| |||||||||   |  || ||||||| ||||||||| || |    
T  28334 atatcaccacgcttacactcagccaatgtgtgtcctttcttcccacatcggaaacacttcttctcatcacggtcacatacattacccttgtggccttttt 28235  T
Q  308 caccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattc 372  Q
    ||||||| ||  | || ||||||| ||||||  ||||||| ||| |||| ||||| |||||||||    
T  28234 caccacatttaaaacagacaatcttagtaggagcatctctcctcctaggcctcctctcatcattc 28170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 143; Significance: 6e-75; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 5 - 399
Target Start/End: Original strand, 70160 - 70554
Alignment:
Q  5 cagcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgt 104  Q
    |||||||||||||||| ||| ||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||    
T  70160 cagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggaatactattaaagaaacaagtacctctgataagtcggtcctcattcaccgt 70259  T
Q  105 atgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaa 204  Q
     || ||||| | ||| ||||||||||| |||||||||  | |||||||||| | | | ||||||||||||| ||| ||||| || | ||| ||| |||||    
T  70260 ttgcgtaccagtcaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactgcgaactaatatgtccttcctcattacagttgtagcaa 70359  T
Q  205 acaatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccct 304  Q
    |||||||| || |||||||| || || |  || || |||||||  ||||||  ||| ||||| ||||||||    |  || ||||||||||||||||| |    
T  70360 acaatatccccacgcttgcaatcagccaatgtgtgtcctttctgtccacatctgaaacacttcttctcatctcggtcacacacattactcttgtggcctt 70459  T
Q  305 tctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcagga 399  Q
    |||||||||||||  |||||| ||||||||||||  ||||||| |||||||| ||||| |||||||||   || ||||| |||||||||||||||    
T  70460 tctcaccacacttaaagcaaataatctcagtaggagcatctctcctcttaggcctcctctcatcattcagcctctgtttacctttgtcagcagga 70554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 60791 - 60857
Alignment:
Q  5 cagcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaaca 71  Q
    |||||||||||||||| ||| ||||| |||| |||||||||||||||||| ||||||||||||||||    
T  60791 cagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggaatactattaaagaaaca 60857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 141; Significance: 9e-74; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 8 - 372
Target Start/End: Complemental strand, 43668 - 43304
Alignment:
Q  8 caatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatg 107  Q
    ||||||||||||| ||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  43668 caatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattcactgtttg 43569  T
Q  108 tgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaaca 207  Q
     ||||| | ||| ||||||||||| ||||||||| || ||||||| || ||| |||||||||| |||| |||||| ||||| ||||||||  ||||||||    
T  43568 cgtaccagtcaaagcaaacaccttgccacctgtccgaaccttcttgggcttcttgcactgcgagctaatatgaccctcttcatcacaattatagcaaaca 43469  T
Q  208 atatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttct 307  Q
    | ||| || ||||| || || ||||  || || |||||||  |||||    |||||||| ||||||||   ||  || |||||||||||||||||||| |    
T  43468 acatccccacgcttacaatcagctaaagtgtgtcctttctgtccacacctaaagcacttcttctcatctcgatcacacacattactcttgtggccctttt 43369  T
Q  308 caccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattc 372  Q
    ||| ||||||| | || ||||||||| ||||  ||||||| |||||||| ||||| |||||||||    
T  43368 cacgacacttgaaacagacaatctcattaggagcatctctcctcttaggcctcctctcatcattc 43304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 136; Significance: 9e-71; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 5 - 372
Target Start/End: Original strand, 176040 - 176406
Alignment:
Q  5 cagcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgt 104  Q
    |||||||||||||||| ||| ||||| |||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| | |||||| ||    
T  176040 cagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactat-aaagaaataagtacctctgataagtcggtctttattaacagt 176138  T
Q  105 atgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaa 204  Q
     || ||||| | ||| ||||||||||| ||||||||| ||||||||| | | |||||||||||||| |||| |||||||||||| ||||||||  |||||    
T  176139 ttgcgtaccagtcaaagcaaacaccttgccacctgtcagagccttctaaagcttcctgcactgcgagctaatatgaccttcttcatcacaattatagcaa 176238  T
Q  205 acaatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccct 304  Q
    |||| |||||| |||||||| || ||||  || || |||||||| |||||    || ||||| |||||||||   |  || ||||||||||||||||| |    
T  176239 acaacatcaccacgcttgcaatcagctaatgtgtgtcctttctttccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggcctt 176338  T
Q  305 tctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattc 372  Q
    | |||||||||||| | || |||||||| |||||  ||||||| ||| |||| ||||| |||||||||    
T  176339 tttcaccacacttgaaacagacaatctctgtaggagcatctctcctcctaggcctcctctcatcattc 176406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 9 - 371
Target Start/End: Complemental strand, 98831 - 98469
Alignment:
Q  9 aatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatgt 108  Q
    |||||||||||| ||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||   || |||    
T  98831 aatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctttgataagtcggtcctcactagtggtttgt 98732  T
Q  109 gtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaacaa 208  Q
    ||||| | ||  ||||||||||| ||||| |||  | ||||||| || |   ||||||||||||| | ||| || |||||||  || ||  | || ||||    
T  98731 gtaccagtcagagcaaacaccttaccaccagtcctaaccttcttcggctgtgtgcactgcgaactgatatggccctcttcgttgcagttataacatacaa 98632  T
Q  209 tatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttctc 308  Q
     |||||| |||||||| || ||||  || || |||||||  |||||   ||| ||||| ||||||||   | | || ||||||||||||||||| |||||    
T  98631 catcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttcttctcatctttagtacaaacattactcttgtggcctttctc 98532  T
Q  309 accacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcatt 371  Q
     ||||||||||| ||||| ||||||| |||  ||||||| | ||| || ||||| ||||||||    
T  98531 gccacacttgtaacaaacgatctcagcaggagcatctctccacttgggcctcctctcatcatt 98469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 135; Significance: 3e-70; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 5 - 399
Target Start/End: Complemental strand, 4556 - 4162
Alignment:
Q  5 cagcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgt 104  Q
    |||||||||||||||| ||| ||||| |||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  4556 cagcaatgaaacaatgagtagcaccagtatctataatagaaattaaatgagtactattaaagaaacaagtacctctgataagtcggtcctcattcaccgt 4457  T
Q  105 atgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaa 204  Q
     || ||||| | ||| ||||||||||| |||||||||  | |||||||||| | | | ||||||||||||| ||| ||||| || | ||| ||| |||||    
T  4456 ctgcgtaccagtcaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactgcgaactaatatgtccttcctcattacagttgtagcaa 4357  T
Q  205 acaatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccct 304  Q
    |||||||| || |||||||| || || |  || || |||||||  |||||    |||||||| ||||||||   ||  || |||||||| |||| | | |    
T  4356 acaatatccccacgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagcacttcttctcatctcgatcacacacattacttttgtagtctt 4257  T
Q  305 tctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcagga 399  Q
    |||||||||||||| |||||| ||||||||||||  ||||||| |||||||| ||||| ||||||||| | || ||||| |||||||||||||||    
T  4256 tctcaccacacttgaagcaaataatctcagtaggagcatctctcctcttaggcctcctctcatcattcaacctctgtttacctttgtcagcagga 4162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 128; Significance: 5e-66; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 217 - 428
Target Start/End: Original strand, 18273048 - 18273259
Alignment:
Q  217 cgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttctcaccacact 316  Q
    ||||||||||| |||||||||||||| ||||| |||||| |||||||||| ||||| ||| || |||| |||||||||||||||||||||||||||||||    
T  18273048 cgcttgcattcagctatcgtatgccccttctttccacatcggaagcacttcttctcctcaccaatgcaaacattactcttgtggcccttctcaccacact 18273147  T
Q  317 tgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcaggaccattgtagggcttcga 416  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||| | ||||| | |||||||||| ||||| || ||||||||||||     
T  18273148 tgtaacaaacaatctcagtaggaacatctcttctcttaggtctcctctcatcattcaatctttgctcccctttgtcaacaggagcactgtagggcttcgg 18273247  T
Q  417 acaaccttgctg 428  Q
    || |||||||||    
T  18273248 acgaccttgctg 18273259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 8 - 372
Target Start/End: Complemental strand, 21742870 - 21742506
Alignment:
Q  8 caatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatg 107  Q
    ||||||||||||| ||| ||||| | || ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  21742870 caatgaaacaatgagtagcaccagtgtctataatagcaattaaatgagtactattaaagaaacaagtacctctgataagtcggtcctcattcactgtttg 21742771  T
Q  108 tgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaaca 207  Q
     ||||| | ||| ||||| ||||| |||||||||  | |||||||||| | | | ||||||||||||| ||| ||||| || | ||| ||| ||||||||    
T  21742770 cgtaccagtcaacgcaaataccttgccacctgtcctaaccttcttaggctgcgtacactgcgaactaatatgtccttcctcattacagttgtagcaaaca 21742671  T
Q  208 atatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttct 307  Q
    | ||| || |||||||| || || |  || || |||||||  |||||    |||||||| ||||||||    |  || ||||||||||||||||| ||||    
T  21742670 acatccccacgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagcacttcttctcatctcggtcacatacattactcttgtggcctttct 21742571  T
Q  308 caccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattc 372  Q
    ||||||||||| |||||| ||||||||||||  ||||||| |||||||| ||||| |||||||||    
T  21742570 caccacacttgaagcaaataatctcagtaggagcatctctcctcttaggcctcctctcatcattc 21742506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 5 - 372
Target Start/End: Complemental strand, 21739357 - 21738990
Alignment:
Q  5 cagcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgt 104  Q
    |||||||||||||||| ||| ||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  21739357 cagcaatgaaacaatgagtagcaccagtatctataatagaaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaaccgt 21739258  T
Q  105 atgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaa 204  Q
     || ||||| | ||| | ||||| ||| |||||||||  | |||||||||| | | | ||||||||||| | |||||||||||| | | | ||| |||||    
T  21739257 ttgcgtaccagtcaaagaaaacagcttgccacctgtcctaaccttcttaggctccgtacactgcgaactgatatgaccttcttcattatagttgtagcaa 21739158  T
Q  205 acaatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccct 304  Q
    | || ||| || ||||| || ||  |||  || || |||||||  |||||    |||||||| ||||||||   ||  || ||||||||||||||||| |    
T  21739157 aaaacatccccacgcttacaatcaactaaggtgtgtcctttctgaccacacctaaagcacttcttctcatctcgatcacaaacattactcttgtggcctt 21739058  T
Q  305 tctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattc 372  Q
    |||||||||||||| |||||| ||||||||||||  || |||| |||||||| ||||| |||||||||    
T  21739057 tctcaccacacttgaagcaaataatctcagtaggagcacctctcctcttaggcctcctctcatcattc 21738990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 8 - 371
Target Start/End: Complemental strand, 22016063 - 22015700
Alignment:
Q  8 caatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatg 107  Q
    ||||||||||||| ||| ||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  22016063 caatgaaacaatgagtatcaccagtatctataatagcaattaaatgagtactattaaagaaacaagtacctctgataagtcggtcctcattcactgtttg 22015964  T
Q  108 tgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaaca 207  Q
     ||||| | ||| ||||||||||| |||||||||  | ||||||| || | | | |||||| |||||| |||| |||| ||||  || ||  | ||||||    
T  22015963 cgtaccagtcaaagcaaacaccttgccacctgtcctaaccttcttcggctgcgtacactgcaaactaatatgatcttcctcgttgcagttataacaaaca 22015864  T
Q  208 atatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttct 307  Q
    | ||| || |||||||| || ||||  || || |||||||  |||||   ||||||||| ||||||||   ||  || |||||||| || ||||| || |    
T  22015863 acatccccacgcttgcaatcagctaaagtgtgtcctttctgaccacacctgaagcacttcttctcatctctatcacaaacattacttttttggccttttt 22015764  T
Q  308 caccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcatt 371  Q
    | ||||||||| | |||||||| |  |||||  |||||||  |||| || ||||| ||||||||    
T  22015763 ctccacacttgaatcaaacaatatttgtaggagcatctctcttctttggcctcctctcatcatt 22015700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 6 - 399
Target Start/End: Complemental strand, 24096935 - 24096542
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| ||| | |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||   ||     
T  24096935 agcaatgaaacaatgagtagcactagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagtcagtcctcattagtagtc 24096836  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    || ||||| | |||||||||||| || ||||| ||   ||||||||| || |   | ||||| ||||| | ||||||||||||||  || ||| ||||||    
T  24096835 tgcgtaccagtcaatgcaaacactttcccaccggttctagccttcttcggctgagtacactgtgaactgatatgaccttcttcgttgcagttgtagcaaa 24096736  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    |||| || || ||||| ||||| ||||  || || |||||||  |||||    || |||||  |||||||   |   ||  |||||||||||||||| ||    
T  24096735 caatgtccccacgcttacattcagctagtgtgtgtcctttctgaccacacctaaaacacttcctctcatctctaccacaagcattactcttgtggccttt 24096636  T
Q  306 ctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcagga 399  Q
     |||||||||||| | ||||||||||||  |||  ||||||| ||||| || ||||| |||||||||   || ||||| |||||||||||||||    
T  24096635 ttcaccacacttgaaacaaacaatctcaacaggagcatctctcctcttgggcctcctctcatcattcatcctctgttttcctttgtcagcagga 24096542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 6 - 137
Target Start/End: Original strand, 48425943 - 48426074
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| |||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||     
T  48425943 agcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaggagtc 48426042  T
Q  106 tgtgtacctgccaatgcaaacacctttccacc 137  Q
    || ||||| | ||| |||||||||||||||||    
T  48426043 tgcgtaccagtcaaagcaaacacctttccacc 48426074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 8 - 399
Target Start/End: Original strand, 19857346 - 19857737
Alignment:
Q  8 caatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatg 107  Q
    ||||||||||||| ||| ||||| |||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||| ||   || ||    
T  19857346 caatgaaacaatgagtagcaccagtatctataatagcagttaaaggagtactattaaagaaacaagtacctctaataagtcgatcctcactagtggtttg 19857445  T
Q  108 tgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaaca 207  Q
     ||||| | ||  |||||||| || ||||  |||  | ||||||| || |   | ||||||||||||| ||||||||| || |   | ||  | ||||||    
T  19857446 cgtaccagtcagagcaaacactttaccactggtcataaccttcttcggttgagtacactgcgaactaatatgaccttcctcattgtagttataacaaaca 19857545  T
Q  208 atatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttct 307  Q
    || || || ||||| || || ||||  || || |||||||  |||||   |||||| || ||||||||   ||  |||||||||||||||||||| || |    
T  19857546 atgtctccccgcttacaatcagctagtgtgtgtcctttctgaccacacctgaagcatttcttctcatctctatcacagacattactcttgtggccttttt 19857645  T
Q  308 caccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcagga 399  Q
    ||||||||||| ||||||||||||| ||||   ||||||| |||||||| ||||| ||||||||| | || || || || ||||||||||||    
T  19857646 caccacacttgaagcaaacaatctcggtagaagcatctctcctcttaggcctcctctcatcattcaacctctgcttacccttgtcagcagga 19857737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 6 - 137
Target Start/End: Complemental strand, 38910146 - 38910015
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| |||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||     
T  38910146 agcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaggagtc 38910047  T
Q  106 tgtgtacctgccaatgcaaacacctttccacc 137  Q
    || ||||| | ||| ||||| |||||||||||    
T  38910046 tgcgtaccagtcaaggcaaaaacctttccacc 38910015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 6 - 131
Target Start/End: Original strand, 52988811 - 52988936
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| |||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||     
T  52988811 agcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattggtagtc 52988910  T
Q  106 tgtgtacctgccaatgcaaacacctt 131  Q
    || ||||| | |||||||||||||||    
T  52988911 tgcgtaccagtcaatgcaaacacctt 52988936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 6 - 98
Target Start/End: Complemental strand, 20075029 - 20074937
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatt 98  Q
    |||||| |||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20075029 agcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatt 20074937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 6 - 137
Target Start/End: Complemental strand, 31537317 - 31537186
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| |||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||   ||     
T  31537317 agcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcttcattaggagtc 31537218  T
Q  106 tgtgtacctgccaatgcaaacacctttccacc 137  Q
    || ||||| | ||  |||||||||||||||||    
T  31537217 tgcgtaccagtcagagcaaacacctttccacc 31537186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 6 - 98
Target Start/End: Original strand, 20297451 - 20297543
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatt 98  Q
    |||||| |||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  20297451 agcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaaccagtacctctgataagtcggtcctcatt 20297543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 6 - 137
Target Start/End: Original strand, 37680119 - 37680250
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| ||||||||  || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||   ||     
T  37680119 agcaataaaacaatgaatagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtctgtcctcattaggagtc 37680218  T
Q  106 tgtgtacctgccaatgcaaacacctttccacc 137  Q
    || ||||| | ||| ||||||||||| |||||    
T  37680219 tgcgtaccagtcaaagcaaacaccttcccacc 37680250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 6 - 415
Target Start/End: Complemental strand, 20854080 - 20853671
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| ||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    ||     
T  20854080 agcaatgaaacaatgcgtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctcgttggtagtc 20853981  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctg-tctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaa 204  Q
    || ||||| | ||| || || ||||| || |  | ||||| |||||||||| | | |||||||||| ||||  || || || ||| ||||||| || |||    
T  20853980 tgggtaccagtcaaagcgaaaaccttccctcaagttctga-ccttcttaggttgcgtgcactgcgagctaatgtggccctcatcgccacaattaaaacaa 20853882  T
Q  205 acaatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccct 304  Q
    || ||||| || ||||||||||| || | | |||| || ||||  || |||  ||| || || ||||||||     ||||  ||||||||||||||||||    
T  20853881 acgatatctccacgcttgcattcagccaacatatgacccttctgaccgcatctgaaacatttcttctcatcttgggtgcaagcattactcttgtggccct 20853782  T
Q  305 tctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcaggaccatt 404  Q
    || ||||||| ||||| |||||||  |||  |||  ||| ||| | ||||||   ||| ||||||||| | |||||||| ||||||| || |||| || |    
T  20853781 tcacaccacatttgtaacaaacaacatcaacaggagcatttctccccttaggctgcctctcatcattcaatctttgtttgcctttgttagtaggagcact 20853682  T
Q  405 gtagggcttcg 415  Q
    |||||||||||    
T  20853681 gtagggcttcg 20853671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 44 - 372
Target Start/End: Original strand, 21961135 - 21961463
Alignment:
Q  44 caattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatgtgtacctgccaatgcaaacacctttccacctgtctg 143  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    || || ||||| | ||| ||||| ||||||||||| ||       
T  21961135 caattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattggtagtctgcgtaccagtcaaagcaaatacctttccaccagttct 21961234  T
Q  144 agccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaacaatatcaccgcgcttgcattccgctatcgtatgccct 243  Q
    | ||||||| || |    |||||||||||| | |||||| ||| | |  || ||| |||| |||||||| || ||||| ||||| ||||   | || ||     
T  21961235 aaccttcttcggctcagggcactgcgaactgatatgaccctctccattgcagttgtagcagacaatatccccacgcttacattcagctaaactgtgtccc 21961334  T
Q  244 ttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacat 343  Q
    ||||  |||||   |||||||||  |||||||   |   || ||||| ||||||||||| || |||||||||||||| ||||||||||||| |||  |||    
T  21961335 ttctgaccacacctgaagcacttcctctcatctttaccacaaacattgctcttgtggcctttttcaccacacttgtaacaaacaatctcagaaggagcat 21961434  T
Q  344 ctcttctcttaggtctcctttcatcattc 372  Q
    |||| ||||| |||||||| |||||||||    
T  21961435 ctctcctcttgggtctcctatcatcattc 21961463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 6 - 96
Target Start/End: Original strand, 18710455 - 18710545
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctca 96  Q
    ||||||||||||||| ||| ||||| | |  ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18710455 agcaatgaaacaatgagtagcaccagtgtttataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctca 18710545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 8 - 372
Target Start/End: Complemental strand, 20833218 - 20832854
Alignment:
Q  8 caatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatg 107  Q
    ||||||||||||| ||| ||||| | || |||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||| ||   || ||    
T  20833218 caatgaaacaatgagtagcaccagtgtctataatagcaattaaaggaataatattaaagaaacaagtacctctgataagtcgatcctcactagtggtttg 20833119  T
Q  108 tgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaaca 207  Q
     ||||| | ||  |||||||| || | ||| |||  | ||||| | || | | | ||||||||||| |  |||||||| || |  || ||  | ||||||    
T  20833118 cgtaccagtcagagcaaacactttactaccggtcctaaccttcctcggttgcgtacactgcgaactgatgtgaccttcctcattgcagttataacaaaca 20833019  T
Q  208 atatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttct 307  Q
    | ||| || | |||||| || ||||  || || |||||||  |||||   ||| || || ||||||||   | | || ||||||||||||||||| ||||    
T  20833018 acatctcccctcttgcaatcagctagtgtgtgtcctttctgaccacacctgaaacaattcttctcatctttagtacaaacattactcttgtggcctttct 20832919  T
Q  308 caccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattc 372  Q
    | |||||||||||||||||||| |||  |||  ||||||| ||||| |||||||| |||||||||    
T  20832918 cgccacacttgtagcaaacaatatcaacaggagcatctctcctcttgggtctcctctcatcattc 20832854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 6 - 334
Target Start/End: Original strand, 16379133 - 16379461
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| |||||||| ||| ||||||||||||||||||||||||||||||||| || |||| |||| ||||||||||| |  || ||||| ||  ||||     
T  16379133 agcaataaaacaatgcgtagcaccaatatcaataatagcaattaaaggagtaccatcaaagtaacatgtacctctgatcaaacgatcctcgttctctgtt 16379232  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    || ||||| | ||| ||||||||  | |||   |||||||||||||| || ||| | || ||||||  ||  ||||| ||||| |  |||||||| || |    
T  16379233 tgcgtaccagtcaaagcaaacactctaccagtagtctgagccttctttggcttcttacattgcgaaacaatgtgaccctcttcattgcaattgaaacaca 16379332  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    |||||||| |  |||| || || |  | |||||| |||||||| |||||  |||| |||  |||| ||||  || | || |||||||| |||||||| ||    
T  16379333 caatatcatcatgcttacactctggaagcgtatgtcctttcttaccacaacggaaacaccatttcacatctccagtacaaacattacttttgtggccttt 16379432  T
Q  306 ctcaccacacttgtagcaaacaatctcag 334  Q
    |||||||||    ||||||||||||||||    
T  16379433 ctcaccacaagcatagcaaacaatctcag 16379461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 286 - 399
Target Start/End: Complemental strand, 31537037 - 31536924
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttcc 385  Q
    ||||| ||||||||||| |||||||||||||| || ||||||||||||| |||  ||||||| ||||| |||||||| |||||||||   || || || |    
T  31537037 acattgctcttgtggcctttctcaccacacttataacaaacaatctcagaaggagcatctctcctcttgggtctcctatcatcattcatcctctgctttc 31536938  T
Q  386 ctttgtcagcagga 399  Q
    ||||||||||||||    
T  31536937 ctttgtcagcagga 31536924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 286 - 413
Target Start/End: Original strand, 52989091 - 52989218
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactt-tgtttc 384  Q
    ||||| ||||||||||| || |||||||||||||| ||||||||||||| |||  ||||||| |||||||| ||||| ||||||||| | ||| || ||     
T  52989091 acattgctcttgtggcctttttcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggcctcctatcatcattc-atcttctgcttt 52989189  T
Q  385 cctttgtcagcaggaccattgtagggctt 413  Q
    ||||||||||||||| || |||| |||||    
T  52989190 cctttgtcagcaggagcactgtaaggctt 52989218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 286 - 369
Target Start/End: Complemental strand, 38909866 - 38909783
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatca 369  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||  |||  ||||||| ||||| || ||||| ||||||    
T  38909866 acattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatca 38909783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 286 - 369
Target Start/End: Original strand, 48426223 - 48426306
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatca 369  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||  |||  ||||||| ||||| || ||||| ||||||    
T  48426223 acattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatca 48426306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 254
Target Start/End: Complemental strand, 21045429 - 21045196
Alignment:
Q  21 tgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatgtgtacctgccaat 120  Q
    |||| ||||| |||||||||||||||||||||||||||||| |||| |||| |||||| | || |  || ||||||||  |||| || ||||| | |||     
T  21045429 tgtagcaccagtatcaataatagcaattaaaggagtactatcaaagtaacatgtacctataatcaaacgatcctcattctctgtttgcgtaccagtcaaa 21045330  T
Q  121 gcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaacaatatcaccgcgct 220  Q
    ||||||||  ||||||  ||||||| ||||||||| |||  ||| || |||  || |||||||||||| |   ||||||| || || | |||| || |||    
T  21045329 gcaaacactcttccactagtctgagtcttcttaggtttctcgcattgtgaaacaatatgaccttcttcattgtaattgaaacacaccacatcatcgtgct 21045230  T
Q  221 tgcattccgctatcgtatgccctttcttcccaca 254  Q
    | ||||| || |  |||||||| |||||||||||    
T  21045229 tacattctgcaagagtatgccccttcttcccaca 21045196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 21752086 - 21752163
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||||||||||||||||||| |||||| ||||||| |||  ||||||||||||||||    
T  21752086 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaaaggtgtactatcaaaataacaagtacctctgat 21752163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 6 - 254
Target Start/End: Complemental strand, 24785177 - 24784929
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| |||||||||||| ||| | ||||||||||||||| |||||||||| ||||||   | |||||||||||||| |  || ||||||||  ||||     
T  24785177 agcaataaaacaatgtgtagcacaagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 24785078  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    || ||||| | ||| ||||| ||| | |||   ||| | ||||||||||| | | ||||||| |||| ||  ||||| ||||| |  |||||||| || |    
T  24785077 tgagtaccagtcaaagcaaaaaccctaccagtagtcggcgccttcttaggctgcttgcactgagaaccaatgtgaccctcttcattgcaattgaaacaca 24784978  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccaca 254  Q
    ||||||||   |||||||| || |||| |||||| || ||||| |||||    
T  24784977 caatatcattacgcttgcagtcagctaccgtatgacccttcttgccaca 24784929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 286 - 369
Target Start/End: Original strand, 20297733 - 20297816
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatca 369  Q
    ||||||||||||||||  ||||||||||||||||| ||||||||||||| |||  ||||||| ||||| || ||||| ||||||    
T  20297733 acattactcttgtggcatttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcctcctgtcatca 20297816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 286 - 333
Target Start/End: Original strand, 37680399 - 37680446
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctca 333  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  37680399 acattactcttgtggcctttctcaccacacttgtagcaaacaatctca 37680446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 17042335 - 17042258
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| || ||||||||| ||||| ||||||||||||||| |||||||||| ||||||   ||||||||||||||||    
T  17042335 agcaataaagcaatgtgtagcaccagtatcaataatagcaactaaaggagtattattaatataacaagtacctctgat 17042258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 21842251 - 21842328
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||||||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  21842251 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 21842328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 286 - 369
Target Start/End: Complemental strand, 20074749 - 20074666
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatca 369  Q
    ||||| ||||||||||| ||||||||||||||||| || ||||||||||| ||  ||||||| |||||| | ||||| ||||||    
T  20074749 acattgctcttgtggcctttctcaccacacttgtaacacacaatctcagtgggagcatctctcctcttaagcctcctgtcatca 20074666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 16347915 - 16347838
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  16347915 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 16347838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 51330812 - 51330735
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  51330812 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 51330735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 260
Target Start/End: Complemental strand, 22436027 - 22435799
Alignment:
Q  32 tatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatgtgtacctgccaatgcaaacacctt 131  Q
    ||||||||||||||| |||||||||| ||||||   |||||||||||||||| |  || ||||||||  |||| | |||||| ||||  ||||| ||| |    
T  22436027 tatcaataatagcaactaaaggagtattattaatataacaagtacctctgatcaagcgatcctcattctctgtctctgtaccagccagagcaaaaaccct 22435928  T
Q  132 tccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaacaatatcaccgcgcttgcattccgct 231  Q
     |||   ||| | ||| ||||||| | | ||||||| |||| ||  ||||| ||||| |  ||||||||||| ||||||||||   ||||||| || |||    
T  22435927 accagtagtcggcgccctcttaggttgcttgcactgagaaccaatgtgaccctcttccttgcaattgaagcacacaatatcactatgcttgcaatcagct 22435828  T
Q  232 atcgtatgccctttcttcccacattggaa 260  Q
    |  ||||| || ||||| |||||| ||||    
T  22435827 aatgtatgacccttcttgccacatcggaa 22435799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 213
Target Start/End: Original strand, 22401631 - 22401838
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||| ||| ||| ||   |||||||| ||||||| |  || ||||| ||  ||||     
T  22401631 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggtgtattatcaatataacaagtatctctgatcaagcgatcctcgttctctgtc 22401730  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    |||||||| | ||| ||||| ||  | |||   | | | ||||||||||| ||| |||||||||||| ||  ||||| ||||| | |||||||||||| |    
T  22401731 tgtgtaccagtcaaagcaaaaactctaccagtagccggcgccttcttaggcttcttgcactgcgaaccaatgtgaccctcttcattacaattgaagcata 22401830  T
Q  206 caatatca 213  Q
    | ||||||    
T  22401831 ctatatca 22401838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 21833348 - 21833418
Alignment:
Q  13 aaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  21833348 aaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 21833418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 33388349 - 33388291
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaa 64  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||    
T  33388349 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaa 33388291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 21228876 - 21228799
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| || ||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  21228876 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtaatattaatatagcaagtacctctgat 21228799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 22496576 - 22496499
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||| ||   |||| |||||||||||    
T  22496576 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattatcaatataacatgtacctctgat 22496499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 41350988 - 41350911
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| || ||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  41350988 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 41350911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 20081696 - 20081619
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| |||  |||| ||||||||||||||| |||||||||| ||| ||   |||| |||||||||||    
T  20081696 agcaataaaacaatgcgtagtaccagtatcaataatagcaactaaaggagtattatcaatataacatgtacctctgat 20081619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 83
Target Start/End: Original strand, 19109408 - 19109484
Alignment:
Q  7 gcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    ||||| ||||||||  || ||||| | ||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  19109408 gcaataaaacaatgcatagcaccagtgtcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 19109484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1056 (Bit Score: 126; Significance: 8e-65; HSPs: 1)
Name: scaffold1056
Description:

Target: scaffold1056; HSP #1
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 8 - 397
Target Start/End: Original strand, 1776 - 2164
Alignment:
Q  8 caatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatg 107  Q
    ||||||||||||| ||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || || ||    
T  1776 caatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctttgataagtcggtcctcattcaccgtttg 1875  T
Q  108 tgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaaca 207  Q
     ||||| | ||| ||||||||||| ||||||||| ||  |||||| || ||| |||||||||| |||| ||| || ||||| ||||||||  |||| |||    
T  1876 cgtaccagtcaaagcaaacaccttgccacctgtccgaaacttcttgggcttcttgcactgcgagctaatatgtccctcttcatcacaattatagcataca 1975  T
Q  208 atatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttct 307  Q
    | ||| || ||||| || || ||||  ||||| |||||||  |||||    |||||||| ||||||||    |  || ||||||||||||||||| ||||    
T  1976 acatc-ccacgcttacaatcagctaaagtatgtcctttctgtccacacctaaagcacttcttctcatctcggtcacacacattactcttgtggcctttct 2074  T
Q  308 caccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcag 397  Q
    ||||||||||| |||||| ||| ||||||||  ||||||  |||||||| ||||| |||||||||   || ||||| |||||||||||||    
T  2075 caccacacttgaagcaaataatttcagtaggagcatctcacctcttaggcctcctctcatcattcagcctctgtttacctttgtcagcag 2164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 123; Significance: 5e-63; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 5 - 399
Target Start/End: Original strand, 34389 - 34783
Alignment:
Q  5 cagcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgt 104  Q
    |||||||||||||||| ||| ||||| |||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  34389 cagcaatgaaacaatgagtagcaccagtatctataatagcagttaaaggagtactattaaagaaacaagtacctctaataagtcggtcctcattaactgt 34488  T
Q  105 atgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaa 204  Q
     || ||||| | ||| |||||||||||||||||||||  | ||||||| || | | | |||| |||||||| ||||||||| || |  || ||  | |||    
T  34489 ttgcgtaccagtcaaggcaaacacctttccacctgtcctaaccttcttcggctgcgtacactacgaactaatatgaccttcctcattgcagttataacaa 34588  T
Q  205 acaatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccct 304  Q
    ||||  || || ||||| || ||  |||  || || |||||||  |||||   ||||||||| ||||||||   ||  |||||||||||||||||||| |    
T  34589 acaacgtccccacgcttacaatcaactaatgtgtgtcctttctaaccacacctgaagcacttcttctcatctctatcacagacattactcttgtggcctt 34688  T
Q  305 tctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcagga 399  Q
    |||||||||||||| | |||||||| ||||||||  ||||||| ||||| || ||||| ||||||||  | ||||| || || ||||||||||||    
T  34689 tctcaccacacttgaaacaaacaatgtcagtaggagcatctctcctcttgggcctcctctcatcatttaacctttgcttacccttgtcagcagga 34783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 123; Significance: 5e-63; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 8 - 398
Target Start/End: Original strand, 42753 - 43143
Alignment:
Q  8 caatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatg 107  Q
    ||||||||||||| ||| ||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  42753 caatgaaacaatgagtagcaccagtatctataatagcaaataaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtttg 42852  T
Q  108 tgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaaca 207  Q
     | ||| |  || ||||||||||| |||||||||  |  ||||||||| | | | ||||||||||||| |||||||||| | | ||||||| ||||||||    
T  42853 cgcaccagtgaaagcaaacaccttgccacctgtcctaatcttcttaggttgcgtacactgcgaactaatatgaccttctgcattacaattgtagcaaaca 42952  T
Q  208 atatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttct 307  Q
    | ||| || |||||  | |||||||  || || |||||||  | |||    |||||||| ||||||||    |  || ||||||||||||||||| ||||    
T  42953 acatccccacgcttaaaatccgctaaagtgtgtcctttctgactacacctaaagcacttcttctcatctcggtcacaaacattactcttgtggcctttct 43052  T
Q  308 caccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcagg 398  Q
    ||| ||||||| | ||||  |||||||||||  ||||||| |||||||| ||||| ||||||||| | || ||||| || |||||||||||    
T  43053 cacaacacttgaaacaaattatctcagtaggagcatctctcctcttaggcctcctctcatcattcaacctctgtttacccttgtcagcagg 43143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 98
Target Start/End: Complemental strand, 50596 - 50504
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatt 98  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||| ||   |||| ||||||||||| || || ||||||||    
T  50596 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattatcaatataacatgtacctctgatcaggcgatcctcatt 50504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 123; Significance: 5e-63; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 8 - 398
Target Start/End: Complemental strand, 63768 - 63378
Alignment:
Q  8 caatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatg 107  Q
    ||||||||||||| ||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  63768 caatgaaacaatgagtaacaccagtatctataatagcaattaaaagagtactattaaagaaacaagtacctctgataagtcggtcctcattcactgtttg 63669  T
Q  108 tgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaaca 207  Q
     ||||| | ||| ||||||||||| |||| ||||  | |||||||||| | | | ||||||||||| | ||||||||| || | | | ||| ||||||||    
T  63668 cgtaccagtcaaagcaaacaccttgccacttgtcctaaccttcttaggctgcgtacactgcgaactgatatgaccttcctcattatagttgtagcaaaca 63569  T
Q  208 atatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttct 307  Q
    ||||| ||  |||| || || ||||  || || |||||||  |||||   ||| ||||| ||||||||    |  || ||||||||||||||||| || |    
T  63568 atatccccatgcttacaatcagctaaagtgtgtcctttctgaccacacctgaaacacttcttctcatctcggtcacaaacattactcttgtggcctttat 63469  T
Q  308 caccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcagg 398  Q
    ||||||||||| | |||||||| ||||||||  ||||||| ||||| || ||||| ||||||||| | ||||| || || |||||||||||    
T  63468 caccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcctctcatcattcaatctttgcttacccttgtcagcagg 63378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 120; Significance: 3e-61; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 5 - 372
Target Start/End: Original strand, 5233 - 5599
Alignment:
Q  5 cagcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgt 104  Q
    |||||||||||||||| ||| ||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  5233 cagcaatgaaacaatgagtagcaccagtatctataatagcaattaaatgagtactattaaagaaacaagtacctctgataagtcggtcctcattcactgt 5332  T
Q  105 atgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaa 204  Q
     || ||||| | ||| ||||| ||||| ||||||| |  || ||||||||| | | | ||||||||||| | |||||||||||| | ||| ||| |||||    
T  5333 ttgcgtaccagtcaacgcaaaaaccttgccacctgacctagacttcttaggctgcgtacactgcgaactgatatgaccttcttcattacagttgtagcaa 5432  T
Q  205 acaatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccct 304  Q
    |||| ||| || ||||| || || ||||  || || |||||||  |||||   ||||||||| ||||||||    |  || ||||||||||||||||| |    
T  5433 acaacatccccacgcttacaatcagctaaagtgtgtcctttctgaccacacctgaagcacttcttctcatctcggtcacaaacattactcttgtggcctt 5532  T
Q  305 tctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattc 372  Q
    | |||||||||||| | |||||||| ||||||||  ||||||| ||||| || ||||| |||||||||    
T  5533 tttcaccacacttgaaacaaacaatatcagtaggagcatctctcctctt-ggcctcctctcatcattc 5599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 117; Significance: 2e-59; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 6 - 437
Target Start/End: Original strand, 8667 - 9098
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||   |||    
T  8667 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctcactagtagta 8766  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    || ||||| | |||||||||||| || ||||| ||   | ||||||| || |   ||||||||||||| | ||| ||||||||||  || ||| ||||||    
T  8767 tgcgtaccagtcaatgcaaacactttcccaccggtactaaccttcttcggttgagtgcactgcgaactgatatggccttcttcgttgcagttgtagcaaa 8866  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    |||| ||||| |||||||| || ||||  || || |||||||  |||||   ||| ||||| ||||||||   | | || ||||||||||||||||| ||    
T  8867 caatgtcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttcttctcatctttagtacaaacattactcttgtggccatt 8966  T
Q  306 ctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactt-tgtttccctttgtcagcaggaccatt 404  Q
    ||| |||||||| || ||||||||||||  |||  ||||||| ||||| ||||| || ||||||||| | ||| || |||||||||||||||||| || |    
T  8967 ctcgccacacttataacaaacaatctcatcaggagcatctctcctcttgggtcttctctcatcattc-agcttctgcttccctttgtcagcaggagcact 9065  T
Q  405 gtagggcttcgaacaaccttgctggcctttgct 437  Q
     || ||||||| || ||  ||||| ||||||||    
T  9066 atacggcttcggacgactctgctgtcctttgct 9098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 114; Significance: 1e-57; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 5 - 398
Target Start/End: Original strand, 50157 - 50550
Alignment:
Q  5 cagcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgt 104  Q
    |||||||||||||||| ||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  50157 cagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctaataagtcggtcctcattcactgt 50256  T
Q  105 atgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaa 204  Q
     || ||||| | ||| ||||||||||| |||||||||  | |||||||||| |   | |||| |||||| | ||||||||| || |  || ||| |||||    
T  50257 ttgcgtaccagtcaaagcaaacaccttgccacctgtcctaaccttcttaggctgggtacactacgaactgatatgaccttcctcattgcagttgtagcaa 50356  T
Q  205 acaatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccct 304  Q
    |||||||| || ||||| || || ||||  || || |||||||  |||||   ||| ||||| ||||||||    |  || ||||||||||||||| | |    
T  50357 acaatatccccacgcttacaatcagctaaggtgtgtcctttctgaccacacctgaaacacttcttctcatctcggtcacaaacattactcttgtggtctt 50456  T
Q  305 tctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcagg 398  Q
    | |||||||||||| | |||||||| ||||||||  ||||||| ||||| || ||||| ||||||||| | || || || || |||||||||||    
T  50457 tttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcctctcatcattccatctatgcttacccttgtcagcagg 50550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 107; Significance: 2e-53; HSPs: 4)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 5 - 399
Target Start/End: Original strand, 29676 - 30070
Alignment:
Q  5 cagcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgt 104  Q
    ||||||| ||||| || ||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29676 cagcaatcaaacattgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgt 29775  T
Q  105 atgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaa 204  Q
     || ||||| | ||| ||||||||||| |||||||||  | ||||||| || | | | ||||||||||| | ||||||||| || |  ||| |  | |||    
T  29776 ctgcgtaccagtcaaagcaaacaccttaccacctgtcctaaccttcttcggttgcgtacactgcgaactgatatgaccttcctcattgcaaatataacaa 29875  T
Q  205 acaatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccct 304  Q
    || || || || | ||| || || ||||  || || || || |  |||||   ||||||||| ||||||||   ||  || || |||||||||||||| |    
T  29876 acgatgtccccacacttacaatcagctagagtgtgtcccttttgaccacacctgaagcacttcttctcatctctatcacaaacgttactcttgtggcctt 29975  T
Q  305 tctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcagga 399  Q
    |||||||||||||| ||||||| || |||||||| |||||||| ||||| || ||||| ||||||||  |||| || || || ||||||||||||    
T  29976 tctcaccacacttgaagcaaactatgtcagtaggaacatctctcctcttgggcctcctctcatcatttaaactctgcttacccttgtcagcagga 30070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 6 - 372
Target Start/End: Complemental strand, 49431 - 49065
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| | ||| | || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||   ||     
T  49431 agcaatgaaacaatgagtagctccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagacggtcctcattagtagtc 49332  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    || ||||| ||||| |||||||| || | ||| ||   | ||||||| || |   ||||||| ||||||| ||| || ||||| ||||||||  ||||||    
T  49331 tgcgtaccagccaaagcaaacactttcctaccagttctaaccttcttcggttgtgtgcactgtgaactaatatggccctcttcatcacaattatagcaaa 49232  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    | | |||||| |||||||| |  ||||  || || |||||||  |||||   ||| || || ||||||||     | || ||||||||||||||||||||    
T  49231 ctacatcaccacgcttgcaattagctagtgtgtgtcctttctgaccacacctgaaacatttcttctcatccttggtacaaacattactcttgtggccctt 49132  T
Q  306 ctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattc 372  Q
    ||| ||||||||||| ||||| ||||||| |||  |||| || || || || |||||||||||||||    
T  49131 ctcgccacacttgtaacaaactatctcagcaggagcatccctcctattcggcctcctttcatcattc 49065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 6 - 372
Target Start/End: Complemental strand, 58465 - 58099
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| | ||| | || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||   ||     
T  58465 agcaatgaaacaatgagtagctccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagacggtcctcattagtagtc 58366  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    || ||||| ||||| |||||||| || | ||| ||   | ||||||| || |   ||||||| ||||||| ||| || ||||| ||||||||  ||||||    
T  58365 tgcgtaccagccaaagcaaacactttcctaccagttctaaccttcttcggttgtgtgcactgtgaactaatatggccctcttcatcacaattatagcaaa 58266  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    | | |||||| |||||||| |  ||||  || || |||||||  |||||   ||| || || ||||||||     | || ||||||||||||||||||||    
T  58265 ctacatcaccacgcttgcaattagctagtgtgtgtcctttctgaccacacctgaaacatttcttctcatccttggtacaaacattactcttgtggccctt 58166  T
Q  306 ctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattc 372  Q
    ||| ||||||||||| ||||| ||||||| |||  |||| || || || || |||||||||||||||    
T  58165 ctcgccacacttgtaacaaactatctcagcaggagcatccctcctattcggcctcctttcatcattc 58099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 6 - 372
Target Start/End: Complemental strand, 64853 - 64487
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| ||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||   ||     
T  64853 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagacggtcctcattagtagtc 64754  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    || ||||| ||||| |||||||| || | ||| ||   | ||||||| || |   ||||||| ||||||| ||| || ||||| ||||||||  ||||||    
T  64753 tgcgtaccagccaaagcaaacactttcctaccagttctaaccttcttcggttgtgtgcactgtgaactaatatggccctcttcatcacaattatagcaaa 64654  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    | | |||||| |||||||| |  ||||  || || |||||||  |||||   ||| || || ||||||||     | || ||||||||||||||||| ||    
T  64653 ctacatcaccacgcttgcaattagctagtgtgtgtcctttctgaccacacctgaaacatttcttctcatccttggtacaaacattactcttgtggccttt 64554  T
Q  306 ctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattc 372  Q
    ||| ||||||||||| ||||| ||||||| |||  |||| || || || || |||||||||||||||    
T  64553 ctcgccacacttgtaacaaactatctcagcaggagcatccctcctattcggcctcctttcatcattc 64487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1433 (Bit Score: 106; Significance: 7e-53; HSPs: 1)
Name: scaffold1433
Description:

Target: scaffold1433; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 6 - 415
Target Start/End: Complemental strand, 1562 - 1153
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||   ||     
T  1562 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcactagtagtc 1463  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    ||  | || | ||| || ||||| || |||||||||  | |||||||||| |   | ||||||||||| | ||||||||| || |  ||| || ||||||    
T  1462 tgcatgccagtcaacgcgaacactttaccacctgtcctaaccttcttaggctgagtacactgcgaactgatatgaccttcctcattgcaagtgtagcaaa 1363  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    ||||||| || ||||| ||||| ||||  || || |||||||  |||||   ||||||||| ||||||||   ||  ||  |||||||||||||||| ||    
T  1362 caatatccccacgcttacattcagctaaagtgtgtcctttctgaccacacctgaagcacttcttctcatctctatcacaagcattactcttgtggccttt 1263  T
Q  306 ctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcaggaccattg 405  Q
     |||||||||||| | ||||  |||||||||||  ||||||| ||||| || ||||| |||||||||   || ||||| || |||||||||||| || ||    
T  1262 ttcaccacacttgaaacaaattatctcagtaggagcatctctcctcttgggcctcctctcatcattcagcctctgtttacccttgtcagcaggagcactg 1163  T
Q  406 tagggcttcg 415  Q
    || |||||||    
T  1162 tatggcttcg 1153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 106; Significance: 7e-53; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 6 - 415
Target Start/End: Original strand, 7797 - 8206
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||   ||     
T  7797 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcactagtagtc 7896  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    ||  | || | ||| || ||||| || |||||||||  | |||||||||| |   | ||||||||||| | ||||||||| || |  ||| || ||||||    
T  7897 tgcatgccagtcaacgcgaacactttaccacctgtcctaaccttcttaggctgagtacactgcgaactgatatgaccttcctcattgcaagtgtagcaaa 7996  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    ||||||| || ||||| ||||| ||||  || || |||||||  |||||   ||||||||| ||||||||   ||  ||  |||||||||||||||| ||    
T  7997 caatatccccacgcttacattcagctaaagtgtgtcctttctgaccacacctgaagcacttcttctcatctctatcacaagcattactcttgtggccttt 8096  T
Q  306 ctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcaggaccattg 405  Q
     |||||||||||| | ||||  |||||||||||  ||||||| ||||| || ||||| |||||||||   || ||||| || |||||||||||| || ||    
T  8097 ttcaccacacttgaaacaaattatctcagtaggagcatctctcctcttgggcctcctctcatcattcagcctctgtttacccttgtcagcaggagcactg 8196  T
Q  406 tagggcttcg 415  Q
    || |||||||    
T  8197 tatggcttcg 8206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 104; Significance: 1e-51; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 8 - 399
Target Start/End: Original strand, 5657 - 6048
Alignment:
Q  8 caatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatg 107  Q
    ||||||||||||| ||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  5657 caatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattcactgtttg 5756  T
Q  108 tgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaaca 207  Q
     |||||    |  ||||||||| | ||||| ||  || |||||||||| ||| |||||| ||| ||||  || || ||||| ||||||||  | ||||||    
T  5757 cgtaccaattagagcaaacaccatgccaccggttcgaaccttcttaggtttcttgcactacgagctaatgtgtccctcttcatcacaattataacaaaca 5856  T
Q  208 atatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttct 307  Q
    | ||| || |||||||| || ||||  || || |||||||  ||||||  ||| ||||| |||| |||   ||  || ||||||||||||||||| ||||    
T  5857 acatccccacgcttgcaatcagctaatgtgtgtcctttctgtccacatctgaaacacttcttcttatctcaatcacacacattactcttgtggcctttct 5956  T
Q  308 caccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcagga 399  Q
    ||||||||||| |  | ||| ||||| ||||  ||||||| ||| |||| ||||| |||||||||    | ||||| |||||||||||||||    
T  5957 caccacacttgaaatagacagtctcattaggggcatctctcctcctaggcctcctctcatcattcagcatctgttttcctttgtcagcagga 6048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 104; Significance: 1e-51; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 32 - 399
Target Start/End: Original strand, 51730 - 52097
Alignment:
Q  32 tatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatgtgtacctgccaatgcaaacacctt 131  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||  | || ||||| | ||| | |||||||||    
T  51730 tatctataatagcaattaaaggagtactattaaagaaataagtacctctgataagtcagtcctcattcacaatctgcgtaccagtcaaagtaaacacctt 51829  T
Q  132 tccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaacaatatcaccgcgcttgcattccgct 231  Q
     ||||||||| || ||||||| || | | | ||||| ||||||| || ||||||||| ||||| ||  || |||||| ||||||  ||||||| |  |||    
T  51830 gccacctgtccgaaccttctttggctgcgtacactgtgaactaatattaccttcttcatcacagttatagaaaacaacatcaccatgcttgcaataagct 51929  T
Q  232 atcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttctcaccacacttgtagcaaacaatct 331  Q
    |  || || |||||||| |||||    |||||||| ||||||||   ||  || ||||||||||||||||| ||||||||||||||| | || | |||||    
T  51930 aaagtgtgtcctttcttaccacacctaaagcacttcttctcatctcgatcacatacattactcttgtggcctttctcaccacacttgaaacagataatct 52029  T
Q  332 cagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcagga 399  Q
    |||||||  ||||||| ||| |||| ||||| |||||||||   || ||||| |||||||||||||||    
T  52030 cagtaggagcatctctcctcctaggcctcctctcatcattcagcctctgtttacctttgtcagcagga 52097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 100; Significance: 3e-49; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 5 - 212
Target Start/End: Original strand, 12012 - 12219
Alignment:
Q  5 cagcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgt 104  Q
    |||||||||||||||| ||| | ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  12012 cagcaatgaaacaatgagtagcgccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattcacagt 12111  T
Q  105 atgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaa 204  Q
     || ||||| | ||| ||||| ||||| ||||||||| || |||||||||| | | | ||||| ||||||| ||| |||||||| | ||| ||| |||||    
T  12112 ttgcgtaccagtcaacgcaaataccttgccacctgtccgaaccttcttaggctgcgtacactgtgaactaatatgtccttcttcattacagttgtagcaa 12211  T
Q  205 acaatatc 212  Q
    ||||||||    
T  12212 acaatatc 12219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 95; Significance: 3e-46; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 9 - 399
Target Start/End: Original strand, 11033 - 11423
Alignment:
Q  9 aatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatgt 108  Q
    |||||||||||| ||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||     
T  11033 aatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaatagtctgc 11132  T
Q  109 gtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaacaa 208  Q
    ||||| | ||| ||||||||||| || || |||  ||||||||| || |   | ||||| || || | |||||| ||||| |  || ||| |||| ||||    
T  11133 gtaccagtcaacgcaaacaccttccctccggtcctagccttcttcggctgagtacactgtgagctgatatgaccctcttcattgcagttgtagcagacaa 11232  T
Q  209 tatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttctc 308  Q
    | || || ||||| ||||| ||||  |  || || ||||  |||||   |||||||||  |||||||   |   ||  |||| ||||||||||| || ||    
T  11233 tgtccccacgcttacattcagctagtgcgtgtcccttctgaccacacctgaagcacttcctctcatctctaccacaagcattgctcttgtggcctttttc 11332  T
Q  309 accacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcagga 399  Q
    |||||||||||| ||||||||||||| |||  ||||||| |||||||| ||||| ||||||||| || | || || |||||||||||||||    
T  11333 accacacttgtaacaaacaatctcagaaggagcatctctcctcttaggactcctatcatcattcaaaatctgctttcctttgtcagcagga 11423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 93; Significance: 4e-45; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 5 - 221
Target Start/End: Original strand, 12779 - 12995
Alignment:
Q  5 cagcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgt 104  Q
    |||||||||||||||| ||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| || ||    
T  12779 cagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacccctgataagttggtcctcattcaccgt 12878  T
Q  105 atgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaa 204  Q
     || ||||| |  || ||||||||||| |||||||||  | |||||||||| | | | ||||||||||| | |||||||||||| | ||| ||| |||||    
T  12879 ttgcgtaccagttaacgcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactgcgaactgatatgaccttcttcattacagttgtagcaa 12978  T
Q  205 acaatatcaccgcgctt 221  Q
    |||| ||| || |||||    
T  12979 acaacatccccacgctt 12995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 91; Significance: 6e-44; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 242 - 372
Target Start/End: Complemental strand, 31028 - 30898
Alignment:
Q  242 ctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcac 341  Q
    |||||||||||||| | |||||||| ||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||    
T  31028 ctttcttcccacatcgaaagcacttcttctcatcaccattgcaagcattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggaac 30929  T
Q  342 atctcttctcttaggtctcctttcatcattc 372  Q
    |||||||||||||| |||||| |||||||||    
T  30928 atctcttctcttagttctcctctcatcattc 30898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 91; Significance: 6e-44; HSPs: 5)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 6 - 372
Target Start/End: Complemental strand, 39584 - 39218
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| |||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||   ||     
T  39584 agcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctcactagtggtt 39485  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    || ||||| | ||  |||||||| || ||||| |||  | ||||||| |  |   | ||||||||||| | | ||||||| || |  || ||  ||||||    
T  39484 tgcgtaccagtcagagcaaacactttaccaccggtcctaaccttcttcgattgtgtacactgcgaactgatacgaccttcctcattgcagttatagcaaa 39385  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    ||| ||| || ||||| || |  ||||  || || |||||||  |||||   ||||||||| ||||||||   ||  || ||||||||||||||||| ||    
T  39384 caacatctccccgcttacaattagctaatgtgtgtcctttctgaccacacctgaagcacttcttctcatctttatcacaaacattactcttgtggccttt 39285  T
Q  306 ctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattc 372  Q
    ||||||||||||||||||||||||||||| |||  ||||||| ||||| || ||||| |||||||||    
T  39284 ctcaccacacttgtagcaaacaatctcagcaggagcatctctcctcttgggcctcctctcatcattc 39218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 13 - 334
Target Start/End: Original strand, 4975 - 5296
Alignment:
Q  13 aaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatgtgtac 112  Q
    |||||||||||| ||||| ||||||||||||||| ||||||  |||||| |||  |||| |||||||| || | ||| ||||||||  |||| || ||||    
T  4975 aaacaatgtgtagcaccagtatcaataatagcaactaaaggtatactatcaaaataacatgtacctctaattaatcgatcctcattctctgtctgcgtac 5074  T
Q  113 ctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaacaatatc 212  Q
    | | ||| | ||| ||  ||||||  | ||||| ||||||||| ||| |||| ||||| | || |||||||||||| |  ||||| || || |||| |||    
T  5075 cagtcaaagaaaaaactcttccactagactgagtcttcttaggtttcttgcattgcgacccaatatgaccttcttcattgcaatttaaacatacaacatc 5174  T
Q  213 accgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttctcacca 312  Q
    | |  |||| ||||| || |  ||||| || ||||| ||||| || || |||  |||| ||||  ||   ||  |||||||||| ||||| |||||||||    
T  5175 atcatgcttacattcagcaagagtatggcccttcttaccacaatgaaaacaccgtttcacatccccaggacaagcattactcttatggcctttctcacca 5274  T
Q  313 cacttgtagcaaacaatctcag 334  Q
    ||  ||||||||||||||||||    
T  5275 caagtgtagcaaacaatctcag 5296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 14477 - 14554
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| || ||||| ||| ||||||||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  14477 agcaataaagcaatgcgtagcaccaatatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 14554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 332
Target Start/End: Original strand, 14757 - 14803
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctc 332  Q
    ||||||||||||||||| ||||| ||||||||| | |||||||||||    
T  14757 acattactcttgtggccattctcgccacacttgaaacaaacaatctc 14803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 333
Target Start/End: Complemental strand, 180809 - 180763
Alignment:
Q  287 cattactcttgtggcccttctcaccacacttgtagcaaacaatctca 333  Q
    |||||||||||||||||||| ||||||| ||||| ||||||| ||||    
T  180809 cattactcttgtggcccttcacaccacatttgtaacaaacaacctca 180763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 88; Significance: 4e-42; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 6 - 437
Target Start/End: Original strand, 7091 - 7522
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| ||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||   ||     
T  7091 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctcactagtggtt 7190  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    || || || |  |  |||||||| || ||||| |||  |  |||||| || ||| |||| ||||| |||| ||| || ||||| ||| | ||  | ||||    
T  7191 tgcgtgccagttagagcaaacactttaccaccggtcctaatcttcttgggcttcttgcattgcgagctaatatgcccctcttcatcatagttataacaaa 7290  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    ||| |||||| |||||||| || ||||  || || |||||||  |||||   ||||||||| ||||||||   | | || ||||||||||||||||| ||    
T  7291 caacatcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaacattactcttgtggccttt 7390  T
Q  306 ctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcaggaccattg 405  Q
    ||| ||||||||||| ||||||||||||| |||  ||||||| || || || ||||| ||||||||| | || || || || |||||| ||||| || |     
T  7391 ctcgccacacttgtaacaaacaatctcagcaggagcatctctcctattgggcctcctctcatcattcaacctctgcttacccttgtcaacaggagcacta 7490  T
Q  406 tagggcttcgaacaaccttgctggcctttgct 437  Q
    || ||||||| || ||  ||||| ||||||||    
T  7491 tacggcttcggacgactctgctgtcctttgct 7522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 88; Significance: 4e-42; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 8 - 371
Target Start/End: Complemental strand, 1132 - 769
Alignment:
Q  8 caatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatg 107  Q
    |||||||| |||| ||| ||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||| ||    
T  1132 caatgaaataatgagtagcaccagtagctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtctgtcctcattagttgtttg 1033  T
Q  108 tgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaaca 207  Q
     ||||| | ||| ||||||||||| ||||| |||  | ||||||| || | | | ||||||||||| | ||||||||| || |  || ||  |  |||||    
T  1032 cgtaccggtcaaagcaaacaccttaccaccagtcctaaccttcttcggttgcgtacactgcgaactgatatgaccttcctcattgcagttataataaaca 933  T
Q  208 atatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttct 307  Q
    || || || ||||| || || ||||  || |  |||||||  |||||   ||||||||| ||||||||   ||  || || |||||||||||||| || |    
T  932 atgtccccacgcttacaatcagctagagtgtatcctttctgaccacacctgaagcacttcttctcatctctatcacaaacgttactcttgtggccttttt 833  T
Q  308 caccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcatt 371  Q
    ||||||||||| ||||||||||||| |||||  ||||||| ||||| || ||||| ||||||||    
T  832 caccacacttgaagcaaacaatctcggtaggagcatctctcctcttgggcctcctctcatcatt 769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 24 - 334
Target Start/End: Complemental strand, 16842 - 16532
Alignment:
Q  24 aacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatgtgtacctgccaatgca 123  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||| |  ||||||||||| ||||| || ||||| | ||| |||    
T  16842 aacaccagtatcaataatagcaattaaaggagtacaattaaagaaacatgtacctctgatcaaccggtcctcattcactgtttgcgtaccagtcaaagca 16743  T
Q  124 aacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaacaatatcaccgcgcttgc 223  Q
    ||||| || ||||  | ||||| ||||||||| ||| |||||||||||| ||  ||||||||||| | | | ||||| || |  |||||| |   |||||    
T  16742 aacactttcccactggcctgagtcttcttaggcttcttgcactgcgaaccaatgtgaccttcttcattatagttgaaacacatcatatcatcattcttgc 16643  T
Q  224 attccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttctcaccacacttgtagca 323  Q
    | ||    || |||||||||||| | ||||| ||||| |||  |||  ||||| ||   ||  |||||||||||||||||||||||||||||||||||||    
T  16642 actctataatagtatgccctttcctaccacaatggaaacaccgttttacatcaccaggacaagcattactcttgtggcccttctcaccacacttgtagca 16543  T
Q  324 aacaatctcag 334  Q
    ||||| |||||    
T  16542 aacaacctcag 16532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 87; Significance: 2e-41; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 6 - 415
Target Start/End: Original strand, 70425 - 70834
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||| ||||||||| ||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    ||     
T  70425 agcaaagaaacaatgagtaacaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctcattggtagtc 70524  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctg-tctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaa 204  Q
    || ||||| | |||  |||| || ||||| || | ||||| |||||||||| | | ||||||| |||||||  || || || || | ||| ||  | |||    
T  70525 tgcgtaccagtcaaaacaaatacttttcctccagttctga-ccttcttaggttgcgtgcactgtgaactaatgtggccctcctcattacagttataacaa 70623  T
Q  205 acaatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccct 304  Q
    |||||||| || ||||||||||| || | |  ||| ||||| |  || |||  ||| ||||| ||||||||     |||||||||||| ||||||||| |    
T  70624 acaatatctccacgcttgcattcagccaacacatgacctttatgaccgcatctgaaacacttcttctcatctttggtgcagacattacccttgtggcctt 70723  T
Q  305 tctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcaggaccatt 404  Q
    || ||||||||||||| |||||||  |||  |||  ||||||| | | |||| | ||| ||||||||| | |||||||| ||||||||||||||| || |    
T  70724 tcgcaccacacttgtaacaaacaacatcaacaggagcatctctccccctaggccgcctctcatcattcaatctttgttttcctttgtcagcaggaacaat 70823  T
Q  405 gtagggcttcg 415  Q
    |||||||||||    
T  70824 gtagggcttcg 70834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 6 - 399
Target Start/End: Complemental strand, 2203 - 1810
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| ||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||    | |||| ||   |      
T  2203 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggaatactattaaagaaacaagtacctctgataagcatcttctcactagtgggt 2104  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    || ||||| | ||  |||||||| || ||||| |||  | ||||||| || |   | ||||||||||| | ||||||||| || |  || ||  ||||||    
T  2103 tgcgtaccagtcagagcaaacactttaccaccggtcctaaccttcttcggttgtgtacactgcgaactgatatgaccttcctcattgcagttatagcaaa 2004  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    |||  || || ||||| || || ||||  || || |||||||  |||||   ||||||||| ||||||||   ||  || ||||||||||||||||| ||    
T  2003 caacgtctccccgcttacaatcagctaatgtgtgtcctttctgaccacacctgaagcacttcttctcatctttatcacaaacattactcttgtggccttt 1904  T
Q  306 ctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcagga 399  Q
    |||||||||||||||||||||||| |||| |||  ||||| | ||||| || ||||| |||||||||   || ||||| |||||||||||||||    
T  1903 ctcaccacacttgtagcaaacaatttcagcaggagcatctatcctcttgggcctcctctcatcattcagcctctgttttcctttgtcagcagga 1810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 164 - 371
Target Start/End: Complemental strand, 11999 - 11792
Alignment:
Q  164 actgcgaactaagatgaccttcttcgtcacaattgaagcaaacaatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagca 263  Q
    |||||||||| | ||||||||||||||  ||| || | |||||||| ||||| |||||||| || ||||  || || |||||||  |||||   ||||||    
T  11999 actgcgaactgatatgaccttcttcgttccaaatgtaacaaacaatgtcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaagca 11900  T
Q  264 ctttttctcatcaacattgcagacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctt 363  Q
    ||| ||||||||   | | || ||||||||||||||||| ||||| ||||||||||| ||||| |||||||||||  ||||||| ||||| || |||||     
T  11899 cttcttctcatctttagtacaaacattactcttgtggcctttctcgccacacttgtaacaaacgatctcagtaggagcatctctcctcttgggcctcctc 11800  T
Q  364 tcatcatt 371  Q
    ||||||||    
T  11799 tcatcatt 11792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 6 - 398
Target Start/End: Original strand, 22175 - 22567
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||     
T  22175 agcaatgaaacaatgagtaacaccagtatctataataccaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattagtagtc 22274  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    || ||||| | ||||||||||||  | ||| | ||   | ||||||| || |   ||||||| ||||| | ||| || ||||| |  || ||  ||||||    
T  22275 tgagtaccagtcaatgcaaacactataccaacggttctaaccttcttcggctgtgtgcactgagaactgatatggccctcttcattgcagttatagcaaa 22374  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    ||| |||||| |||||||| ||  |||  || || |||||||  ||||| | |||||| || ||||||||   | |  | ||||||||||||||||| ||    
T  22375 caacatcaccacgcttgcaatcaactagggtgtgtcctttctgaccacacttgaagcatttcttctcatccttagtaaaaacattactcttgtggccttt 22474  T
Q  306 ctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcagg 398  Q
    ||| ||||||||||| ||||| ||||||  |||  ||||||| || || || ||||| |||||||||   ||||| || |||||||| |||||    
T  22475 ctcgccacacttgtaacaaacgatctcaacaggagcatctctcctattgggcctcctctcatcattcagtctttgatttcctttgtcggcagg 22567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 85; Significance: 2e-40; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 6 - 333
Target Start/End: Complemental strand, 94145 - 93818
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| ||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||   ||     
T  94145 agcaatgaaacaatgcgtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctcattagtagtc 94046  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgt-ctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaa 204  Q
    || ||||| | ||| ||||| || ||||| || || |||| |||||||||| |   |||||||||||||||  ||||| || ||  |||| || || |||    
T  94045 tgcgtaccagtcaaagcaaatacttttcctccagtcctga-ccttcttaggttgagtgcactgcgaactaatgtgaccctcatcaccacagttaaaacaa 93947  T
Q  205 acaatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccct 304  Q
    |||||||| || |||||||| ||||| | |  ||| |||||||  || |||  ||| || || ||||||||   | ||||  ||||||||||||||||||    
T  93946 acaatatctccacgcttgcaatccgccaacacatgacctttctgaccgcatctgaaacatttcttctcatcttgagtgcaagcattactcttgtggccct 93847  T
Q  305 tctcaccacacttgtagcaaacaatctca 333  Q
    || ||||||| ||||| ||||||| ||||    
T  93846 tcacaccacatttgtaacaaacaacctca 93818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 6 - 88
Target Start/End: Original strand, 115615 - 115697
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtc 88  Q
    ||||||||||||||||||| ||||| |||| |||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  115615 agcaatgaaacaatgtgtagcaccagtatctataatagcaattaaagggatactattaaagaaacaagtacctctgataagtc 115697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 84; Significance: 9e-40; HSPs: 2)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 6 - 137
Target Start/End: Original strand, 11862 - 11993
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| |||||||| ||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||     
T  11862 agcaataaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaggagtc 11961  T
Q  106 tgtgtacctgccaatgcaaacacctttccacc 137  Q
    |||||||| | ||| |||||||||||||||||    
T  11962 tgtgtaccagtcaaagcaaacacctttccacc 11993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 286 - 332
Target Start/End: Original strand, 12130 - 12176
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctc 332  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||    
T  12130 acattactcttgtggcctttctcaccacacttgtagcaaacaatctc 12176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 83; Significance: 4e-39; HSPs: 2)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 6 - 372
Target Start/End: Complemental strand, 10023 - 9657
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| ||||| | || |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||   ||     
T  10023 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctttgataagtcgatcctcactagtggtt 9924  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    || ||||| | ||  ||||||||||| ||||| |||  | ||||||| || | | | || || ||||| | ||| || || || |  || ||  ||||||    
T  9923 tgcgtaccagtcagagcaaacaccttaccaccagtcctaaccttcttcggttgcgtacattgtgaacttatatggccctcctcattgcagttatagcaaa 9824  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    ||| ||| || ||||| || ||  |||  || || |||||||  |||||   ||||||||| ||||||||   ||  |||||||||||||||||||||||    
T  9823 caacatctccccgcttacaatcaactagggtgtgtcctttctgaccacacctgaagcacttcttctcatccttatcacagacattactcttgtggccctt 9724  T
Q  306 ctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattc 372  Q
    |||||||||||||||||||||||| |||| |||  ||||||| || || || ||||| |||||||||    
T  9723 ctcaccacacttgtagcaaacaatatcagcaggagcatctctcctgtttggcctcctctcatcattc 9657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 24196 - 24119
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||| | ||||||||||||||| |||||| ||||||| |||  ||||||||||||||||    
T  24196 agcaataaaacaatgcgtagcactagtatcaataatagcaactaaaggtgtactatcaaaataacaagtacctctgat 24119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 83; Significance: 4e-39; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 218 - 370
Target Start/End: Original strand, 36096 - 36245
Alignment:
Q  218 gcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttctcaccacactt 317  Q
    |||| |||||||||||| ||||||||||| | |||||| ||||||||||   ||| ||| |||| |||||||||||||||||||| |||||||||||| |    
T  36096 gcttacattccgctatcttatgccctttccttccacataggaagcactt---ctcctcaccattacagacattactcttgtggcctttctcaccacacct 36192  T
Q  318 gtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcat 370  Q
    |||||||||||||| ||||||  |||||||||||||||||||||| |||||||    
T  36193 gtagcaaacaatcttagtaggggcatctcttctcttaggtctcctctcatcat 36245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 81; Significance: 6e-38; HSPs: 2)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 8 - 152
Target Start/End: Complemental strand, 30575 - 30431
Alignment:
Q  8 caatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatg 107  Q
    ||||||||||||| ||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||   ||| ||    
T  30575 caatgaaacaatgagtagcaccaatatctataatagcaattaaaggagtacttttaaagaaacaagtacctctgataagtcggtcctcatttgttgtctg 30476  T
Q  108 tgtacctgccaatgcaaacacctttccacctgtctgagccttctt 152  Q
     ||||| | |||||||||||| || ||||| |||  |||||||||    
T  30475 cgtaccagtcaatgcaaacactttcccaccggtcctagccttctt 30431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 287 - 399
Target Start/End: Complemental strand, 30296 - 30184
Alignment:
Q  287 cattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactt-tgtttcc 385  Q
    |||| ||||||||||| || ||||||||||| || ||||||||||||| |||  ||||| | ||||| || ||||| ||||||||| | ||| |||||||    
T  30296 cattgctcttgtggcctttttcaccacacttataacaaacaatctcagcaggagcatctttcctcttgggcctcctgtcatcattc-atcttctgtttcc 30198  T
Q  386 ctttgtcagcagga 399  Q
    ||||||||||||||    
T  30197 ctttgtcagcagga 30184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 81; Significance: 6e-38; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 8 - 372
Target Start/End: Original strand, 36994 - 37358
Alignment:
Q  8 caatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatg 107  Q
    ||||||||||||| ||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||  ||| ||    
T  36994 caatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctatgataagtctgtcttcattagttgtttg 37093  T
Q  108 tgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaaca 207  Q
     ||||| | ||| | ||||||||| ||||| |||  | ||||||| || | | | ||||| ||||| | ||||||||| || |  || ||  ||||||||    
T  37094 cgtaccggtcaaagaaaacaccttaccaccagtcctaaccttcttcggctgcgtacactgtgaactgatatgaccttcctcattgcagttatagcaaaca 37193  T
Q  208 atatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttct 307  Q
    ||||| || | ||| || || ||||  || || || ||||  |||||   ||||||||| ||||||||   ||  || ||||||||||||||||| ||||    
T  37194 atatccccacacttacaatcagctagtgtgtgtcccttctgaccacacctgaagcacttcttctcatctttatcacaaacattactcttgtggcctttct 37293  T
Q  308 caccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattc 372  Q
    | ||||||||| |||||| ||| ||||||||    ||||| ||||| || ||||| |||||||||    
T  37294 cgccacacttgaagcaaaaaatatcagtaggagtgtctctcctcttgggcctcctctcatcattc 37358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 81; Significance: 6e-38; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 6 - 134
Target Start/End: Original strand, 41788 - 41916
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| |||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||     
T  41788 agcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaggagtc 41887  T
Q  106 tgtgtacctgccaatgcaaacacctttcc 134  Q
    || ||||| | ||| ||||||||||||||    
T  41888 tgcgtaccagtcaaagcaaacacctttcc 41916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 286 - 369
Target Start/End: Original strand, 42068 - 42151
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatca 369  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||  |||  ||||||| ||||| || ||||| ||||||    
T  42068 acattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatca 42151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 80; Significance: 2e-37; HSPs: 4)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 75 - 398
Target Start/End: Original strand, 5562 - 5885
Alignment:
Q  75 acctctgataagtcggtcctcattaactgtatgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaacta 174  Q
    |||||||||||||||||||||||| || || || ||||| | ||| |||||||| || |||||||||  | |||||||||| | | | |||||||||||     
T  5562 acctctgataagtcggtcctcattcaccgtttgcgtaccagtcaacgcaaacactttgccacctgtcctaaccttcttaggttgcgtacactgcgaactg 5661  T
Q  175 agatgaccttcttcgtcacaattgaagcaaacaatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcat 274  Q
    | |||||||||||| | ||||||| ||||||||| ||| || ||||| || || ||||  || || |||||||  |||||    |||||||| |||||||    
T  5662 atatgaccttcttcattacaattgtagcaaacaacatccccacgcttacaatcagctaaagtgtgtcctttctgaccacacctaaagcacttcttctcat 5761  T
Q  275 caacattgcagacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattcta 374  Q
    |   ||  || || |||||||||||||| ||||||||||||||| ||||||  |||||||||||  ||||||| |||||| | ||||| ||||||||| |    
T  5762 ctcgatcacacacgttactcttgtggcctttctcaccacacttgaagcaaattatctcagtaggagcatctctcctcttaagcctcctctcatcattcaa 5861  T
Q  375 actttgtttccctttgtcagcagg 398  Q
     || || || || |||||||||||    
T  5862 tctctgcttacccttgtcagcagg 5885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 11968 - 11904
Alignment:
Q  32 tatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctca 96  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11968 tatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctca 11904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 2926 - 2998
Alignment:
Q  8 caatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctct 80  Q
    ||||||||||||| ||| | ||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  2926 caatgaaacaatgagtagccccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctct 2998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 333
Target Start/End: Complemental strand, 11714 - 11667
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctca 333  Q
    ||||||||||||||||| |||| |||||||||||| || |||||||||    
T  11714 acattactcttgtggcctttcttaccacacttgtatcatacaatctca 11667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 6 - 137
Target Start/End: Original strand, 29987 - 30118
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| |||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||     
T  29987 agcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattggtagtc 30086  T
Q  106 tgtgtacctgccaatgcaaacacctttccacc 137  Q
    || |||||   |||||||||||||||||||||    
T  30087 tgcgtaccaatcaatgcaaacacctttccacc 30118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 331
Target Start/End: Original strand, 30276 - 30312
Alignment:
Q  295 ttgtggcccttctcaccacacttgtagcaaacaatct 331  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  30276 ttgtggcctttctcaccacacttgtaacaaacaatct 30312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1032 (Bit Score: 79; Significance: 9e-37; HSPs: 1)
Name: scaffold1032
Description:

Target: scaffold1032; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 6 - 428
Target Start/End: Complemental strand, 1066 - 644
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| |||||||| ||| ||| | | || |||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||  |||     
T  1066 agcaataaaacaatgagtagcactagtgtctataatagcaattaagggagtactattaaagaaacaagtacctttgataagtctgtcctcattagttgtt 967  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    || ||||| | ||| ||||||||||| ||||| |||  | ||||||| || | | | ||||||||||| | ||| ||||| ||||  || ||  | ||||    
T  966 tgcgtaccggtcaaagcaaacaccttaccaccagtcctaaccttctttggctgcgtacactgcgaactgatatgtccttcctcgttgcagttataacaaa 867  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    |||| || || ||||| || || ||||  || || || ||||  |||||   ||||||||| ||||||||   ||  || ||||||||||||||||| ||    
T  866 caatgtccccacgcttacaatcagctagtgtgtgtcccttctgaccacacctgaagcacttcttctcatctctatcacaaacattactcttgtggccttt 767  T
Q  306 ctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcaggaccattg 405  Q
     |||||||||||| ||||| |||| || |||||  ||||||| ||||| || ||||| ||||||||  | || || ||||| ||||| |||||| || |     
T  766 ttcaccacacttgaagcaatcaatgtccgtaggagcatctctcctcttgggcctcctctcatcatttaacctctgcttccccttgtcggcaggagcacta 667  T
Q  406 tagggcttcgaacaaccttgctg 428  Q
    || ||||||| || || ||||||    
T  666 tacggcttcggacgactttgctg 644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 78; Significance: 4e-36; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 6 - 131
Target Start/End: Complemental strand, 514604 - 514479
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| |||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||     
T  514604 agcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattggtagtc 514505  T
Q  106 tgtgtacctgccaatgcaaacacctt 131  Q
    || ||||| | |||||||||||||||    
T  514504 tgcgtaccagtcaatgcaaacacctt 514479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 286 - 372
Target Start/End: Complemental strand, 514324 - 514238
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattc 372  Q
    ||||| ||||||||||| ||||||||||||||||| ||||||||||||| |||  ||||||| |||||||| ||||| |||||||||    
T  514324 acattgctcttgtggcctttctcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggcctcctatcatcattc 514238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 496073 - 496150
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||||||| ||| | ||||||||||||||| ||||||  |||||| |||  |||| |||||||||||    
T  496073 agcaataaaacaatgtgtagcactagtatcaataatagcaactaaaggtctactatcaaaataacatgtacctctgat 496150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 441706 - 441759
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtact 59  Q
    |||||| |||||||  ||| ||||| ||||||||||||||| ||||||||||||    
T  441706 agcaataaaacaatccgtagcaccagtatcaataatagcaactaaaggagtact 441759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2062 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold2062
Description:

Target: scaffold2062; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 9 - 372
Target Start/End: Complemental strand, 1125 - 757
Alignment:
Q  9 aatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatgt 108  Q
    |||||||||||| ||||||| | | || ||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||| | ||  ||| ||     
T  1125 aatgaaacaatgagtaacactagtgtctataatagcaattaaaggcgtattattaaagaaacaagtacctctgataagtctgtccttactagttgtttgc 1026  T
Q  109 gtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaa---ga--tgaccttcttcgtcacaattgaagca 203  Q
    ||||| | ||| ||||||||||| ||||| |||  | ||||||| || |   | ||||||||||| |   ||  |||||||| ||||  || ||  ||||    
T  1025 gtaccagtcaaagcaaacaccttaccaccagtcctaaccttcttcggttgtgtacactgcgaactgaactgatgtgaccttcctcgttgcagttatagca 926  T
Q  204 aacaatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccc 303  Q
    |||||| ||||| ||||| || || ||||  || || |||||||  |||||   ||||||||| ||||||||   ||  ||||||||||||||||||||     
T  925 aacaatgtcaccacgcttacaatcagctagtgtgtgtcctttctgaccacacatgaagcacttcttctcatctctatcacagacattactcttgtggcct 826  T
Q  304 ttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattc 372  Q
    || |||||||||||| |||||||||| ||  ||||  ||||||| ||||| || ||||| |||||||||    
T  825 ttttcaccacacttgaagcaaacaatatccataggagcatctctcctcttgggcctcctctcatcattc 757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1288 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold1288
Description:

Target: scaffold1288; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 107 - 13
Alignment:
Q  5 cagcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatta 99  Q
    |||||||||||||||| ||| ||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  107 cagcaatgaaacaatgagtagcacccgtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatta 13  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 6 - 152
Target Start/End: Complemental strand, 5396 - 5250
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| ||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    ||     
T  5396 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaatgagtactattaaagaaacaagtacctctgataagtcggtcctcatttgtagtc 5297  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttctt 152  Q
    || ||||| | |||||||||||| || ||||| |||  |||||||||    
T  5296 tgcgtaccagtcaatgcaaacactttcccaccggtcctagccttctt 5250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 399
Target Start/End: Complemental strand, 5107 - 5003
Alignment:
Q  295 ttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcag 394  Q
    |||||||| || ||| ||| ||| || |||||||| |||| |||  ||||||| ||||| || ||||| |||||||||   || || |||||||||||||    
T  5107 ttgtggcctttttcatcactcttttaacaaacaatttcagcaggagcatctctcctcttgggcctcctatcatcattcatcctctgcttccctttgtcag 5008  T
Q  395 cagga 399  Q
    |||||    
T  5007 cagga 5003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 8 - 334
Target Start/End: Original strand, 5143 - 5469
Alignment:
Q  8 caatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatg 107  Q
    |||| |||||||| ||| ||||| |||||||||||||||||||| ||||||||| |||| |||| |||||||| || |  ||||||| ||| | ||| ||    
T  5143 caataaaacaatgcgtagcaccagtatcaataatagcaattaaaagagtactatcaaagtaacatgtacctctaatcaaccggtccttattcaatgtctg 5242  T
Q  108 tgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaaca 207  Q
     ||||| | ||| |||||||| || ||||  || |||||||||||||| ||| |||||||||||| || |||||||||||| |  || ||||| || ||     
T  5243 cgtaccagtcaaagcaaacactttcccactagtttgagccttcttaggcttcttgcactgcgaaccaatatgaccttcttcattgcatttgaaacacacc 5342  T
Q  208 atatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttct 307  Q
    | |||| |  |||| ||||| |  || |||||||||||||| |||||  |||| |||| |||| ||||  || | ||  |||||||||||||||| |||     
T  5343 acatcatcatgcttacattctgtaatagtatgccctttcttaccacaacggaaacactgtttcacatccccagtacaagcattactcttgtggcctttca 5442  T
Q  308 caccacacttgtagcaaacaatctcag 334  Q
    |||||||   ||||||||||| |||||    
T  5443 caccacaagggtagcaaacaacctcag 5469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 6 - 372
Target Start/End: Complemental strand, 9272 - 8906
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| ||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||   ||     
T  9272 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctcactagtggtt 9173  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    || ||||| | ||  |||||||| || ||||| |||  | ||||||| |  |   | ||||||||| | |  |||||||| || |  || ||  ||||||    
T  9172 tgcgtaccagtcagagcaaacacattaccaccggtcctaaccttcttcgtttgtgtacactgcgaattgatttgaccttcctcattgcagttatagcaaa 9073  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    ||| ||| || ||||| || |  ||||  || || |||||||  |||||   ||||||||| ||||||||   ||  |||||||||||||||||||  ||    
T  9072 caacatctccccgcttacaattagctaatgtgtgtcctttctgaccacacctgaagcacttcttctcatccttatcacagacattactcttgtggctttt 8973  T
Q  306 ctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattc 372  Q
    |||||||||||||||||||||||||| || ||   ||||||| ||||| || ||||| |||||||||    
T  8972 ctcaccacacttgtagcaaacaatcttagcagaagcatctctcctcttgggcctcctctcatcattc 8906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 75; Significance: 2e-34; HSPs: 3)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 738 - 616
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| ||||| |||||| ||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||     
T  738 agcaattaaacattgtgtagcaccagtttctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattagtagtc 639  T
Q  106 tgtgtacctgccaatgcaaacac 128  Q
    |||||||| | ||||||||||||    
T  638 tgtgtaccagtcaatgcaaacac 616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 6 - 96
Target Start/End: Original strand, 20867 - 20957
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctca 96  Q
    ||||||||||||||| ||| ||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  20867 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtagatcctca 20957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 286 - 398
Target Start/End: Original strand, 21147 - 21259
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttcc 385  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||   ||||||| ||||| || ||||| |||||||||   || ||||| |    
T  21147 acattactcttgtggcctttctcaccacacttgtagcaaacaatctcagcagaagcatctctcctcttgggcctcctctcatcattcagcctctgttttc 21246  T
Q  386 ctttgtcagcagg 398  Q
    |||||||||||||    
T  21247 ctttgtcagcagg 21259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 74; Significance: 9e-34; HSPs: 2)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 6 - 131
Target Start/End: Original strand, 514 - 639
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| ||||||||  || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||     
T  514 agcaataaaacaatgactagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattggtagtc 613  T
Q  106 tgtgtacctgccaatgcaaacacctt 131  Q
    || ||||| | |||||||||||||||    
T  614 tgcgtaccagtcaatgcaaacacctt 639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 286 - 413
Target Start/End: Original strand, 794 - 921
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactt-tgtttc 384  Q
    ||||| ||||||||||| || |||||||||||||| ||||||||||||| |||  ||||||| |||||||| ||||| |||||| || ||||| |  ||     
T  794 acattgctcttgtggcctttttcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggcctcctatcatcaatc-aacttctacttt 892  T
Q  385 cctttgtcagcaggaccattgtagggctt 413  Q
    ||||||||||||||| || |||| |||||    
T  893 cctttgtcagcaggagcactgtaaggctt 921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 74; Significance: 9e-34; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 6 - 371
Target Start/End: Original strand, 5858 - 6223
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| ||| | |||| |||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||  ||   ||     
T  5858 agcaatgaaacaatgagtagcactagtatctataataacaattaaaggagtactattaaagaaacaagtacctctgataagcctgtcctcgctagtggtt 5957  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    || ||| | |  |  |||||||| || ||||| |||  | ||||||| || |   | ||||| ||||||| ||| ||||| ||||  || ||  | ||||    
T  5958 tgcgtatcagttagagcaaacactttaccaccggtcctaaccttcttcggttgtgtacactgtgaactaatatgtccttcctcgttgcagttataacaaa 6057  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    |||| || || |||||||| || ||||  || || |||||||  ||||||  ||||||||| ||||||||   ||  |||||||||||||||||||| ||    
T  6058 caatgtccccacgcttgcaatcagctagtgtgtgtcctttctgaccacatctgaagcacttcttctcatctctatcacagacattactcttgtggccttt 6157  T
Q  306 ctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcatt 371  Q
     |||||||||||| |||||||||| |||||| |  ||||||| ||||| || ||||| ||||||||    
T  6158 ttcaccacacttgaagcaaacaatgtcagtaagagcatctctcctcttgggcctcctctcatcatt 6223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 41364 - 41210
Alignment:
Q  1 tcagcagcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaa 100  Q
    ||||||||||| |||||||||||| ||||| |||| ||||||| |||||| ||||||||||||| | |||| ||||||||||| ||  | ||||||||      
T  41364 tcagcagcaataaaacaatgtgtagcaccagtatctataatagtaattaagggagtactattaatgtaacatgtacctctgatcagatgatcctcattcg 41265  T
Q  101 ctgtatgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagg 155  Q
    |||| || ||||| || || ||||||||| | ||||  | |||||| ||||||||    
T  41264 ctgtctgagtaccagctaaagcaaacaccatcccactagactgagctttcttagg 41210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0765 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 6 - 137
Target Start/End: Complemental strand, 6508 - 6377
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| ||||| | || ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||   ||     
T  6508 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattatagaaacaagtacctctgataagacggtcctcattagtagtc 6409  T
Q  106 tgtgtacctgccaatgcaaacacctttccacc 137  Q
    |||||||| | ||| ||||| |||||||||||    
T  6408 tgtgtaccagtcaaagcaaatacctttccacc 6377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 67358 - 67267
Alignment:
Q  7 gcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatt 98  Q
    ||||| |||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  67358 gcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgatgagtcggtcctcatt 67267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 286 - 372
Target Start/End: Complemental strand, 67079 - 66993
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattc 372  Q
    ||||| ||||||||||| || ||||||||||| || ||||||||||| | |||  ||||||| ||||| |||||||| |||||||||    
T  67079 acattgctcttgtggcctttttcaccacacttataacaaacaatctcggaaggagcatctctcctcttgggtctcctatcatcattc 66993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 6 - 348
Target Start/End: Complemental strand, 1105 - 763
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| ||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||   ||     
T  1105 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataattcgatcctcactagtggtt 1006  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    ||  |||| | ||| |||||||| || ||||| ||   | ||||| | || | | | ||||| ||||| | |||||| ||||| |  || ||  | ||||    
T  1005 tgcataccagtcaaagcaaacactttaccaccggttctaaccttcctcggttgcgtacactgtgaactgatatgaccctcttcattgcagttataacaaa 906  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    |||||||||| |||||||| || ||||  || || |||||||  |||||   ||||||||| ||||||||   | | || ||||||||||| ||||| ||    
T  905 caatatcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaacattactcttatggccttt 806  T
Q  306 ctcaccacacttgtagcaaacaatctcagtaggcacatctctt 348  Q
    ||  ||||||||||| ||||||||||||| |||  ||||||||    
T  805 cttgccacacttgtaacaaacaatctcagcaggagcatctctt 763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 71; Significance: 5e-32; HSPs: 2)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 6 - 96
Target Start/End: Original strand, 54100 - 54190
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctca 96  Q
    ||||||||||||||| ||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  54100 agcaatgaaacaatgagtaacaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctca 54190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 286 - 399
Target Start/End: Original strand, 54380 - 54493
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttcc 385  Q
    ||||||||||||||||| ||||| ||||||||||| ||||| ||||||| | |  ||| || ||| || || ||||| ||||||||| | || || ||||    
T  54380 acattactcttgtggcctttctcgccacacttgtaacaaacgatctcagcaagagcatttcatctattgggcctcctctcatcattcaacctctgcttcc 54479  T
Q  386 ctttgtcagcagga 399  Q
    ||||||||||||||    
T  54480 ctttgtcagcagga 54493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 70; Significance: 2e-31; HSPs: 3)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 6 - 99
Target Start/End: Original strand, 15176 - 15269
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatta 99  Q
    ||||||||||||||| ||| ||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  15176 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactataaaagaaacaagtacctctgataagtcgatcctcatta 15269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 188
Target Start/End: Original strand, 6173 - 6348
Alignment:
Q  13 aaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatgtgtac 112  Q
    |||||||| ||| || || |||||||||||||||||||||||||||||| |||| |||| |||||||| || |  || ||||||||  |||| || ||||    
T  6173 aaacaatgcgtagcatcagtatcaataatagcaattaaaggagtactatcaaagtaacatgtacctctaatcaaacgatcctcattctctgtttgcgtac 6272  T
Q  113 ctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttc 188  Q
    | | |||  |||||||  ||||||  ||||||| ||||||||| ||| |||| ||||| | || ||||||||||||    
T  6273 cagtcaaaccaaacactcttccactagtctgagtcttcttaggtttcttgcattgcgacccaatatgaccttcttc 6348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 286 - 371
Target Start/End: Original strand, 15405 - 15490
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcatt 371  Q
    ||||||||||||||||| ||||| |||||||| ||||| | |||||||| |||  ||||||| || || || ||||| ||||||||    
T  15405 acattactcttgtggcctttctcgccacacttatagcagaaaatctcagcaggagcatctctcctattgggcctcctctcatcatt 15490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 70; Significance: 2e-31; HSPs: 4)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 7 - 96
Target Start/End: Complemental strand, 164651 - 164562
Alignment:
Q  7 gcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctca 96  Q
    |||||||||||||| ||| ||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  164651 gcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctca 164562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 47234 - 47155
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataa 85  Q
    |||||| |||||||||||| |||||  ||||||||||| || |||||| |||||||||||  ||||||||||||||||||    
T  47234 agcaataaaacaatgtgtagcaccagaatcaataatagtaactaaaggtgtactattaaaataacaagtacctctgataa 47155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 398
Target Start/End: Complemental strand, 164372 - 164260
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttcc 385  Q
    ||||||||||||||||| ||||| ||||||||||| ||||| ||||||| |||  | ||||| || || || ||||| ||||||||| | || ||||| |    
T  164372 acattactcttgtggcctttctcgccacacttgtaacaaacgatctcagcaggagcgtctctcctattgggcctcctctcatcattcaacctctgttttc 164273  T
Q  386 ctttgtcagcagg 398  Q
    | |||||||||||    
T  164272 ccttgtcagcagg 164260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 30825 - 30774
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagta 57  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| ||||||||||    
T  30825 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagta 30774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1530 (Bit Score: 69; Significance: 8e-31; HSPs: 2)
Name: scaffold1530
Description:

Target: scaffold1530; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 636 - 724
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcct 94  Q
    ||||||||||||||| ||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  636 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcct 724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1530; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 283 - 399
Target Start/End: Original strand, 834 - 950
Alignment:
Q  283 cagacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtt 382  Q
    |||||||||||||||||||| ||||  ||||||||||||||||||||||||| |||  ||||||| |||||||| ||||| ||||||||| | || || |    
T  834 cagacattactcttgtggcctttctagccacacttgtagcaaacaatctcagcaggagcatctctcctcttaggcctcctctcatcattcaatctctgct 933  T
Q  383 tccctttgtcagcagga 399  Q
    | || ||||||||||||    
T  934 tacccttgtcagcagga 950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1426 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold1426
Description:

Target: scaffold1426; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 32 - 413
Target Start/End: Complemental strand, 1832 - 1451
Alignment:
Q  32 tatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatgtgtacctgccaatgcaaacacctt 131  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    || || ||||| | |||||||||||| ||    
T  1832 tatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattggtagtctgcgtaccagtcaatgcaaacacttt 1733  T
Q  132 tccacctgtctgagccttcttagggttcctg-cactgcgaactaagatgaccttcttcgtcacaattgaagcaaacaatatcaccgcgcttgcattccgc 230  Q
     || || ||   | |||||||  |||||  | ||||| ||||| | |||||| ||| | |  || ||| |||| | ||| || || ||||||||||| ||    
T  1732 gcccccagttctaaccttctt-cggttcgggacactgtgaactgatatgaccctctccattgcagttgtagcagataatgtccccacgcttgcattcagc 1634  T
Q  231 tatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggcccttctcaccacacttgtagcaaacaatc 330  Q
    ||   | || || ||||  |||||   |||||||||  |||||||   |   || |||||||||||||| || ||||||||||||||||| |||||||||    
T  1633 taaactgtgtcccttctgaccacacctgaagcacttcctctcatctttaccacaaacattactcttgtgtcctttctcaccacacttgtaacaaacaatc 1534  T
Q  331 tcagtaggcacatctcttctcttaggtctcctttcatcattctaactt-tgtttccctttgtcagcaggaccattgtagggctt 413  Q
    |||| |||  ||||||| |||||||| ||||| |||||| || | ||| || || ||||||||||||||| || |||| |||||    
T  1533 tcagaaggagcatctctcctcttaggcctcctatcatcactc-atcttctgctttcctttgtcagcaggagcactgtaaggctt 1451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 6 - 188
Target Start/End: Original strand, 15463 - 15645
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| |||||||| ||| |||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||| | ||| ||||||||  ||||     
T  15463 agcaataaaacaatgcgtagcaccaatatcaataatagcaattaaaggagtactatcaaagtaacatgtacctctgatcaatcgatcctcattctctgtt 15562  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttc 188  Q
    || ||||| | ||| ||||| ||  |||||   ||||||||||||||||| ||| | || | ||||| || ||||||||||||    
T  15563 tgcgtaccagtcaaagcaaaaactcttccagtagtctgagccttcttaggcttcttacattacgaaccaatatgaccttcttc 15645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 334
Target Start/End: Original strand, 15744 - 15791
Alignment:
Q  287 cattactcttgtggcccttctcaccacacttgtagcaaacaatctcag 334  Q
    |||||||||| ||||| |||||||||||  ||||||||||||||||||    
T  15744 cattactcttatggcctttctcaccacaagtgtagcaaacaatctcag 15791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 66; Significance: 5e-29; HSPs: 3)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 6 - 99
Target Start/End: Complemental strand, 796 - 703
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatta 99  Q
    ||||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||    
T  796 agcaatgaaacaatgtgtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagcttgtcctcatta 703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 10841 - 10916
Alignment:
Q  8 caatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||| |||||||| ||| ||||||||||||||||||||| |||||| ||||||| |||  ||||||||||||||||    
T  10841 caataaaacaatgcgtagcaccaatatcaataatagcaactaaaggtgtactatcaaaataacaagtacctctgat 10916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 286 - 372
Target Start/End: Complemental strand, 516 - 430
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattc 372  Q
    |||||||| |||||||| ||||| ||||||||  ||||||| |||||||||||  ||||||| ||||| ||||| || |||||||||    
T  516 acattacttttgtggcctttctcgccacacttaaagcaaactatctcagtaggagcatctctcctcttgggtcttctctcatcattc 430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 66; Significance: 5e-29; HSPs: 3)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 6 - 99
Target Start/End: Complemental strand, 5100 - 5007
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatta 99  Q
    ||||||||||||||||||| ||||| | || |||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  5100 agcaatgaaacaatgtgtagcaccagtgtctataatatcaattaaaggagtagtattaaagaaacaagtacctctgataagacggtcctcatta 5007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 6 - 99
Target Start/End: Complemental strand, 17735 - 17642
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatta 99  Q
    ||||||||||||||  ||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  17735 agcaatgaaacaataagtagcaccaatgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagacgatcctcatta 17642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 398
Target Start/End: Complemental strand, 17455 - 17343
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttcc 385  Q
    ||||||||||||||||| ||||| |||||||| || ||||| ||||||| |||  ||||||| || || || ||||| |||||||||   |||||||| |    
T  17455 acattactcttgtggcctttctcgccacacttataacaaactatctcagcaggagcatctctcctattcggcctcctctcatcattcagtctttgttttc 17356  T
Q  386 ctttgtcagcagg 398  Q
    | |||||||||||    
T  17355 ccttgtcagcagg 17343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 66; Significance: 5e-29; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 6 - 99
Target Start/End: Complemental strand, 53674 - 53581
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatta 99  Q
    |||| |||||||||| ||| ||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  53674 agcattgaaacaatgagtagcaccagtttctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagttggtcctcatta 53581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 286 - 398
Target Start/End: Complemental strand, 53394 - 53282
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttcc 385  Q
    ||||||||||||||||| ||||| ||||||||||| ||||| ||| ||| | |  ||||||| || || || ||||| ||||||||| | || || || |    
T  53394 acattactcttgtggcctttctcgccacacttgtaacaaacgatcccagcaagagcatctctcctattgggcctcctctcatcattcaatctctgctttc 53295  T
Q  386 ctttgtcagcagg 398  Q
    | |||||||||||    
T  53294 ccttgtcagcagg 53282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 66; Significance: 5e-29; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 6 - 99
Target Start/End: Original strand, 251675 - 251768
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatta 99  Q
    ||||||||||||||| ||| ||| | |||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  251675 agcaatgaaacaatgagtagcactagtatctataatagcaattaaagaagtactattaaagaaacaagtacctctgataagccggtcctcatta 251768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 230093 - 230026
Alignment:
Q  16 caatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    ||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  230093 caatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 230026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 1173 - 1253
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataag 86  Q
    ||||||||||||||| ||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1173 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataag 1253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 258 - 399
Target Start/End: Original strand, 5358 - 5499
Alignment:
Q  258 gaagcactttttctcatcaacattgcagacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggt 357  Q
    ||||||||| ||||||||   ||  |||||||||||| ||||||| ||||| || |||||||||||||||||||||| |||  ||||||| ||| | ||     
T  5358 gaagcacttcttctcatctttatcacagacattactcctgtggcctttctcgccgcacttgtagcaaacaatctcagcaggagcatctctcctcgtgggc 5457  T
Q  358 ctcctttcatcattctaactttgtttccctttgtcagcagga 399  Q
    ||||| ||||||||| | || ||||| || || |||||||||    
T  5458 ctcctctcatcattcaacctctgttttcccttatcagcagga 5499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 6 - 334
Target Start/End: Complemental strand, 65549 - 65221
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||| ||||||||| ||| ||||| | || ||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||    ||     
T  65549 agcaaggaaacaatgagtagcaccagtgtctataatagcaattaaaggtgtactattaaagaaacaagtacctctgataagcctgtcctcattggtagtc 65450  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    || ||||| | ||||||| |||| |||||||| |||  | ||||||| || |   ||||||| ||||| |  || ||||| || ||||||||  | ||||    
T  65449 tgcgtaccagtcaatgcatacacttttccaccggtcctaaccttctttggctgggtgcactgtgaactgatgtggccttcctcatcacaattataacaaa 65350  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    ||| ||| || | ||| || |  || | ||| || |||||||  |||||   ||||||||||||||||||     | || ||||||||||||||||| ||    
T  65349 caacatctcctctcttacaattagccaacgtgtgtcctttctgaccacacctgaagcactttttctcatctttggtacaaacattactcttgtggccttt 65250  T
Q  306 ctcaccacacttgtagcaaacaatctcag 334  Q
    ||| ||||||||||| ||||||| |||||    
T  65249 ctcgccacacttgtaacaaacaacctcag 65221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 79 - 398
Target Start/End: Complemental strand, 62950 - 62631
Alignment:
Q  79 ctgataagtcggtcctcattaactgtatgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagat 178  Q
    |||||||||||||||||||| ||||| || ||||| | ||| |||||||| || |||||||||  | | |||||||| | | | ||||||||||| | ||    
T  62950 ctgataagtcggtcctcattcactgtttgcgtaccagtcaaagcaaacactttgccacctgtcctaactttcttaggctgcgtacactgcgaactgatat 62851  T
Q  179 gaccttcttcgtcacaattgaagcaaacaatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaac 278  Q
    |||||| ||| | ||| ||| || |||||| ||| || ||||| || || ||||  || ||  ||||||  |||||    |||||||| |||||||||      
T  62850 gaccttattcattacagttgtagaaaacaacatccccacgcttacaatcagctaaagtgtgtactttctgaccacacctaaagcacttcttctcatcatg 62751  T
Q  279 attgcagacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactt 378  Q
     |  || ||||||||||||||||| ||||||||||||||| |  ||||||| ||||||||  ||||||| |||||||| ||||| ||||||||| | ||     
T  62750 gtcacatacattactcttgtggcctttctcaccacacttgaattaaacaatatcagtaggagcatctctcctcttaggcctcctctcatcattcaatctc 62651  T
Q  379 tgtttccctttgtcagcagg 398  Q
    || || || |||||||||||    
T  62650 tgcttacccttgtcagcagg 62631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1517 (Bit Score: 64; Significance: 8e-28; HSPs: 2)
Name: scaffold1517
Description:

Target: scaffold1517; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 37 - 128
Target Start/End: Complemental strand, 1707 - 1616
Alignment:
Q  37 ataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatgtgtacctgccaatgcaaacac 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   || || ||||| | ||||||||||||    
T  1707 ataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattagtagtctgcgtaccagtcaatgcaaacac 1616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1517; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 287 - 413
Target Start/End: Complemental strand, 1457 - 1331
Alignment:
Q  287 cattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccc 386  Q
    |||| ||||||||||| || |||||||||||||| || |||||||||| |||  ||||||| ||||| || ||||| |||||||||    | ||||| ||    
T  1457 cattgctcttgtggcctttttcaccacacttgtaacagacaatctcagcaggagcatctctcctcttgggcctcctatcatcattcattttctgttttcc 1358  T
Q  387 tttgtcagcaggaccattgtagggctt 413  Q
     |||||||||||| || |||| |||||    
T  1357 cttgtcagcaggagcactgtaaggctt 1331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 64; Significance: 8e-28; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 77 - 372
Target Start/End: Original strand, 16761 - 17056
Alignment:
Q  77 ctctgataagtcggtcctcattaactgtatgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaag 176  Q
    |||||||||||||||||||||| || || ||  |||| | ||| | ||| ||||| |||||||||  | |||||||||  | | | |||||||||||||     
T  16761 ctctgataagtcggtcctcattcacagtttgcataccagacaacgaaaataccttgccacctgtcctaaccttcttagtctgcgtacactgcgaactaat 16860  T
Q  177 atgaccttcttcgtcacaattgaagcaaacaatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatca 276  Q
    ||| ||||| || | ||| ||| ||||||||||||| || |||||||| || || |  || || |||||||  |||||    |||||||| ||||||||     
T  16861 atgtccttcctcattacagttgtagcaaacaatatccccacgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagcacttcttctcatct 16960  T
Q  277 acattgcagacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattc 372  Q
      ||  || ||||||||||||||||| ||||| ||||||||| | |||| ||||||||||||  ||||||| |||||||| ||||| |||||||||    
T  16961 cgatcacacacattactcttgtggcctttctctccacacttgaaacaaataatctcagtaggagcatctctcctcttaggcctcctctcatcattc 17056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1299 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold1299
Description:

Target: scaffold1299; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 6 - 96
Target Start/End: Complemental strand, 2099 - 2009
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctca 96  Q
    ||||||||||||||| ||| ||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  2099 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagcctgtcctca 2009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 6 - 96
Target Start/End: Complemental strand, 5460 - 5370
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctca 96  Q
    ||||||||||||||| ||| |||||   || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5460 agcaatgaaacaatgagtagcaccagcgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctca 5370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 258 - 399
Target Start/End: Complemental strand, 5208 - 5067
Alignment:
Q  258 gaagcactttttctcatcaacattgcagacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggt 357  Q
    ||||||||| ||||||||   ||  |||||||||||||||||||| || || ||||||||||||||||||||||||| |||  ||||||| ||| ||||     
T  5208 gaagcacttcttctcatccttatcacagacattactcttgtggcctttttcgccacacttgtagcaaacaatctcagcaggagcatctctcctcctaggc 5109  T
Q  358 ctcctttcatcattctaactttgtttccctttgtcagcagga 399  Q
    | ||| |||| ||||   ||||| || || ||||||||||||    
T  5108 cacctctcattattcagcctttgctttcccttgtcagcagga 5067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 6 - 96
Target Start/End: Complemental strand, 9478 - 9388
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctca 96  Q
    ||||||||||||||| ||| ||||| | || |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  9478 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaatgaaacaagtacctctgataagtcgatcctca 9388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 14 - 188
Target Start/End: Complemental strand, 13722 - 13548
Alignment:
Q  14 aacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatgtgtacc 113  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||| |||| |||| ||||||||||| |  || ||||||||  |||| ||||||||    
T  13722 aacaatgtgtagcatcaatatcaataatagcaattaaaggagtactatcaaagtaacatgtacctctgatcaaacgatcctcattctctgtttgtgtacc 13623  T
Q  114 tgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttc 188  Q
     | ||| ||||||||  | ||||  ||||||| ||||||||| ||| |||| || || | || ||||||||||||    
T  13622 agtcaaagcaaacactctaccactagtctgagtcttcttaggtttcttgcattgtgacccaatatgaccttcttc 13548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 287 - 336
Target Start/End: Complemental strand, 13444 - 13395
Alignment:
Q  287 cattactcttgtggcccttctcaccacacttgtagcaaacaatctcagta 336  Q
    |||||||||| ||||| |||||||||||  ||||||||||||||||||||    
T  13444 cattactcttatggcctttctcaccacaagtgtagcaaacaatctcagta 13395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 263279 - 263409
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| ||||| | || |||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||   ||     
T  263279 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctaataagcctgtcctcattagtagtc 263378  T
Q  106 tgtgtacctgccaatgcaaacacctttccac 136  Q
    || ||||| | ||| |||||||| |||||||    
T  263379 tgcgtaccagtcaaagcaaacacttttccac 263409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 203434 - 203564
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    ||||||||||||||| ||| ||||| | || |||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||   ||     
T  203434 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctaataagcctgtcctcattagtagtc 203533  T
Q  106 tgtgtacctgccaatgcaaacacctttccac 136  Q
    || ||||| | ||| |||||||| |||||||    
T  203534 tgcgtaccagtcaaagcaaacacttttccac 203564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 83
Target Start/End: Original strand, 424362 - 424438
Alignment:
Q  7 gcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    ||||| |||||||| ||| ||||| |||||||||||| || |||||||||| ||||||   | ||||||||||||||    
T  424362 gcaataaaacaatgcgtagcaccagtatcaataatagaaactaaaggagtattattaatatagcaagtacctctgat 424438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1373 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold1373
Description:

Target: scaffold1373; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 85 - 1
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgg 90  Q
    |||||||||||||||  || ||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  85 agcaatgaaacaatgaatagcactagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgg 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 10037 - 9957
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataag 86  Q
    ||||||||||||||| ||| ||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10037 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataag 9957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 59; Significance: 8e-25; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 5 - 103
Target Start/End: Complemental strand, 12600 - 12502
Alignment:
Q  5 cagcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactg 103  Q
    |||||||||||||||| ||| ||||| |||| |||||| || ||||||||||||||| ||||||||||||| || ||||||||||||||||||| ||||    
T  12600 cagcaatgaaacaatgagtagcaccagtatctataataacatttaaaggagtactatgaaagaaacaagtagctttgataagtcggtcctcattcactg 12502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 5 - 103
Target Start/End: Complemental strand, 20780 - 20682
Alignment:
Q  5 cagcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactg 103  Q
    |||||||||||||||| ||| ||||| |||| |||||| || ||||||||||||||| ||||||||||||| || ||||||||||||||||||| ||||    
T  20780 cagcaatgaaacaatgagtagcaccagtatctataataacatttaaaggagtactatgaaagaaacaagtagctttgataagtcggtcctcattcactg 20682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 59; Significance: 8e-25; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 6 - 372
Target Start/End: Complemental strand, 8713 - 8347
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||||||||| || ||| ||| | | || |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||   ||     
T  8713 agcaatgaaacattgagtagcactagtgtctataatagcaattaaaggattactattaaagaaacaagtacctctgataagtcgatcctcactagtagtc 8614  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    || ||||| | |||||||||||| || ||||| ||   | ||||||| || |   ||||||||||||| | ||| || | ||| |  || ||  | ||||    
T  8613 tgcgtaccagtcaatgcaaacactttcccaccggttctaaccttcttcggttgattgcactgcgaactgatatggccctattcattgcagttataacaaa 8514  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    |||  ||||| |||||||| || ||||  || || || ||||  |||||   ||| ||||| ||||||||   | | || ||||||||||||||||| ||    
T  8513 caacgtcaccacgcttgcaatcagctagagtgtgtcccttctgaccacacctgaaacacttcttctcatccttagtacaaacattactcttgtggccatt 8414  T
Q  306 ctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattc 372  Q
    ||| |||||||| || |||||||| |||  | |  ||||||| ||||| |||||||| |||||||||    
T  8413 ctcgccacacttataacaaacaatatcaacatgagcatctctcctcttgggtctcctctcatcattc 8347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 6 - 372
Target Start/End: Complemental strand, 18927 - 18561
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||||||||| || ||| ||| | | || |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||   ||     
T  18927 agcaatgaaacattgagtagcactagtgtctataatagcaattaaaggattactattaaagaaacaagtacctctgataagtcgatcctcactagtagtc 18828  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    || ||||| | |||||||||||| || ||||| ||   | ||||||| || |   ||||||||||||| | ||| || | ||| |  || ||  | ||||    
T  18827 tgcgtaccagtcaatgcaaacactttcccaccggttctaaccttcttcggttgattgcactgcgaactgatatggccctattcattgcagttataacaaa 18728  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    |||  ||||| |||||||| || ||||  || || || ||||  |||||   ||| ||||| ||||||||   | | || ||||||||||||||||| ||    
T  18727 caacgtcaccacgcttgcaatcagctagagtgtgtcccttctgaccacacctgaaacacttcttctcatccttagtacaaacattactcttgtggccatt 18628  T
Q  306 ctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattc 372  Q
    ||| |||||||| || |||||||| |||  | |  ||||||| ||||| |||||||| |||||||||    
T  18627 ctcgccacacttataacaaacaatatcaacatgagcatctctcctcttgggtctcctctcatcattc 18561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 6 - 96
Target Start/End: Complemental strand, 19220 - 19130
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctca 96  Q
    ||||||||||||||| ||| ||||| |||| ||||||| ||||||||||||||||||||||||||||| |||||||||||| | |||||||    
T  19220 agcaatgaaacaatgagtagcaccagtatctataatagtaattaaaggagtactattaaagaaacaagcacctctgataagcctgtcctca 19130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 286 - 399
Target Start/End: Original strand, 2964 - 3077
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttcc 385  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||  |||  ||||||| ||||| || ||||| ||||||||| | || ||||| |    
T  2964 acattactcttgtggcctttcttaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctctcatcattcaacctctgttttc 3063  T
Q  386 ctttgtcagcagga 399  Q
    ||||||||||||||    
T  3064 ctttgtcagcagga 3077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 57; Significance: 1e-23; HSPs: 3)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 6 - 98
Target Start/End: Original strand, 40111 - 40203
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatt 98  Q
    |||||| |||||||| ||| ||||  | || |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  40111 agcaataaaacaatgagtagcacctgtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctaataagacggtcctcatt 40203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 113
Target Start/End: Complemental strand, 17597 - 17493
Alignment:
Q  9 aatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatgt 108  Q
    |||||||||||| ||| ||||  ||||||||||||||| |||||| ||| ||||||   |||||||||||||||| |  || ||||||||  |||| |||    
T  17597 aatgaaacaatgcgtagcacctgtatcaataatagcaactaaaggtgtattattaatataacaagtacctctgatcaagcgatcctcattttctgtctgt 17498  T
Q  109 gtacc 113  Q
    |||||    
T  17497 gtacc 17493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 286 - 398
Target Start/End: Original strand, 40391 - 40503
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttcc 385  Q
    ||||||||||||||||| ||||| |||||||| || || || ||||||| |||  ||||||| || || || ||||| |||||||||   ||||| || |    
T  40391 acattactcttgtggcctttctcgccacacttataacagactatctcagcaggagcatctctcctattcggcctcctctcatcattcagtctttgctttc 40490  T
Q  386 ctttgtcagcagg 398  Q
    | |||||||||||    
T  40491 ccttgtcagcagg 40503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2165 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold2165
Description:

Target: scaffold2165; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 1020 - 962
Alignment:
Q  40 atagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatt 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1020 atagcaattaaaggagtactattaaagaaacaagtacctctgataagttggtcctcatt 962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2165; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 286 - 372
Target Start/End: Complemental strand, 774 - 688
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattc 372  Q
    ||||| ||||||||||| ||||||||| ||||||| ||||||||||||| |||  ||||||| |||||||| ||||| |||||||||    
T  774 acattgctcttgtggcctttctcaccaaacttgtaacaaacaatctcagaaggagcatctctcctcttaggcctcctatcatcattc 688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 55; Significance: 2e-22; HSPs: 6)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 6 - 96
Target Start/End: Original strand, 151620 - 151710
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctca 96  Q
    ||||||||||||||| ||| ||| | |||| |||||||||||||||||||||||||||||||||||| ||||||| ||||| | |||||||    
T  151620 agcaatgaaacaatgagtagcactagtatctataatagcaattaaaggagtactattaaagaaacaaatacctctaataagcctgtcctca 151710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 6 - 413
Target Start/End: Complemental strand, 23784 - 23377
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| |||||||||||| ||||| ||||||||||||||| |||||| ||||||| |||  |||| ||||||||||| |   | ||||||||  ||||     
T  23784 agcaataaaacaatgtgtagcaccagtatcaataatagcaactaaaggtgtactatcaaaataacatgtacctctgatcaaatgatcctcattctctgtc 23685  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    || ||||| | ||| ||||| ||  | |||   ||||| ||||||||||| ||| | || ||||||| || ||||||||| || |  || || || || |    
T  23684 tgagtaccagtcaaagcaaaaactctcccagtagtctgcgccttcttaggcttcttacattgcgaaccaatatgaccttcctcattgcagttaaaacata 23585  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    ||| |||| |  |||| ||||| || |  |||||||||||||| |||||  | || |||  |||| ||||  ||   ||  |||||||||| ||||| ||    
T  23584 caacatcatcatgcttacattcggcaagtgtatgccctttcttaccacaacgaaaacaccgtttcacatccccaggacaagcattactcttatggccttt 23485  T
Q  306 ctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcaggaccattg 405  Q
    |||||||||  |||||||||||||||||| |   |||||| |  |  |||| ||||| ||||||||| | |||||||| || || ||||||||| || ||    
T  23484 ctcaccacaagtgtagcaaacaatctcagcaacaacatctttatttctaggcctcctctcatcattcaatctttgttttcccttatcagcaggagcactg 23385  T
Q  406 tagggctt 413  Q
    || |||||    
T  23384 taaggctt 23377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 258 - 372
Target Start/End: Original strand, 153797 - 153911
Alignment:
Q  258 gaagcactttttctcatcaacattgcagacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggt 357  Q
    ||||||||| ||||||||   ||  |||||||||||||| ||||  || |||||||||||| |||||||||||||||| ||  ||||||| ||||| ||     
T  153797 gaagcacttcttctcatctctatcacagacattactcttatggcttttttcaccacacttgaagcaaacaatctcagtgggagcatctctcctcttgggc 153896  T
Q  358 ctcctttcatcattc 372  Q
    ||||| |||||||||    
T  153897 ctcctctcatcattc 153911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 73841 - 73792
Alignment:
Q  13 aaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactatt 62  Q
    |||||||| ||| ||||| |||||||||| ||||| ||||||||||||||    
T  73841 aaacaatgagtagcaccagtatcaataattgcaatcaaaggagtactatt 73792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 78222 - 78173
Alignment:
Q  13 aaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactatt 62  Q
    |||||||| ||| ||||| |||||||||| ||||| ||||||||||||||    
T  78222 aaacaatgagtagcaccagtatcaataattgcaatcaaaggagtactatt 78173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 175760 - 175708
Alignment:
Q  10 atgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactatt 62  Q
    |||||| |||| ||| ||||| |||||||||| ||||| ||||||||||||||    
T  175760 atgaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactatt 175708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1845 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold1845
Description:

Target: scaffold1845; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 286 - 413
Target Start/End: Complemental strand, 1275 - 1148
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactt-tgtttc 384  Q
    ||||| ||||||||||| ||||||||||||||||| ||||||||||||| |||  ||||||| ||||| |||||||| ||||||||| | ||| || ||     
T  1275 acattgctcttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggtctcctatcatcattc-atcttctgcttt 1177  T
Q  385 cctttgtcagcaggaccattgtagggctt 413  Q
    ||||||||||||||| || |||| |||||    
T  1176 cctttgtcagcaggagcactgtaaggctt 1148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 8 - 188
Target Start/End: Complemental strand, 216669 - 216489
Alignment:
Q  8 caatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatg 107  Q
    |||| |||||||||||| ||||| ||||||||||||||||||||| |||||||| |||| |||| ||||||||||| | | | ||||||||  |||| ||    
T  216669 caataaaacaatgtgtagcaccagtatcaataatagcaattaaagtagtactatcaaagtaacatgtacctctgatcaattgatcctcattctctgtctg 216570  T
Q  108 tgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttc 188  Q
     ||||| | ||| ||||| ||  | |||   ||||| ||||||||||| ||| |||| ||||| | || ||||||||||||    
T  216569 cgtaccagtcaaagcaaaaactctcccagtagtctgcgccttcttaggcttcttgcattgcgacccaatatgaccttcttc 216489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 334
Target Start/End: Complemental strand, 216390 - 216343
Alignment:
Q  287 cattactcttgtggcccttctcaccacacttgtagcaaacaatctcag 334  Q
    |||||||||| ||||| |||||||||||  ||||||||||||||||||    
T  216390 cattactcttatggcctttctcaccacaagtgtagcaaacaatctcag 216343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 52; Significance: 1e-20; HSPs: 3)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 17930 - 18005
Alignment:
Q  5 cagcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctct 80  Q
    ||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||| |||| |||| ||||||||    
T  17930 cagcaataaaacaatgtgtagcaccagtatcaataatagcaattaaaggagtactatcaaagtaacatgtacctct 18005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 111158 - 111081
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||| |||||||||||  |||| |||||||||||    
T  111158 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggtgtactattaaaataacatgtacctctgat 111081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 334
Target Start/End: Original strand, 18179 - 18226
Alignment:
Q  287 cattactcttgtggcccttctcaccacacttgtagcaaacaatctcag 334  Q
    |||||||||| ||||| |||||||||||  ||||||||||||||||||    
T  18179 cattactcttatggcctttctcaccacaagtgtagcaaacaatctcag 18226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 2047 - 2144
Alignment:
Q  1 tcagcagcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatt 98  Q
    |||||| |||| |||||||| ||| ||||| |||| ||||||| |||||||||||||||||||| |||||| ||||||||||| || || ||||||||    
T  2047 tcagcaacaataaaacaatgcgtagcaccagtatctataatagtaattaaaggagtactattaatgaaacatgtacctctgattagacgatcctcatt 2144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 258 - 415
Target Start/End: Complemental strand, 283 - 126
Alignment:
Q  258 gaagcactttttctcatcaacattgcagacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggt 357  Q
    ||||||||| ||||||||   ||  |||||||||||||||||||| ||||| ||||||||| |||||||||| ||||||||  | ||||| ||||| ||     
T  283 gaagcacttcttctcatctctatcacagacattactcttgtggcctttctcgccacacttgaagcaaacaatatcagtaggagcctctctgctcttgggc 184  T
Q  358 ctcctttcatcattctaactttgtttccctttgtcagcaggaccattgtagggcttcg 415  Q
    ||||| ||||||||  | || || || || |||||||||||| |||| || |||||||    
T  183 ctcctctcatcatttaacctctgcttacccttgtcagcaggagcattttacggcttcg 126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 50; Significance: 2e-19; HSPs: 4)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 286 - 415
Target Start/End: Complemental strand, 4424 - 4295
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttcc 385  Q
    ||||||||||| ||||| ||||| ||||||||| |||||||||| ||||||||  ||||||| ||||| || ||||| ||||||||  |||| || || |    
T  4424 acattactcttttggcctttctcgccacacttgaagcaaacaatatcagtaggagcatctctcctcttgggcctcctctcatcatttaaactctgcttac 4325  T
Q  386 ctttgtcagcaggaccattgtagggcttcg 415  Q
    | |||||||||||| || |||| |||||||    
T  4324 ccttgtcagcaggagcagtgtacggcttcg 4295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 17317 - 17240
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| || ||||||||| ||||| ||||||||||||||| |||||||||| ||||||   ||||||||||||||||    
T  17317 agcaataaagcaatgtgtagcaccagtatcaataatagcaactaaaggagtattattaatataacaagtacctctgat 17240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 136
Target Start/End: Original strand, 24361 - 24489
Alignment:
Q  8 caatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatg 107  Q
    |||| |||||||||||| | | | |||| ||||||| |||||| ||||||||||||| |||||| |||||||| || ||  | ||||||||  || | ||    
T  24361 caataaaacaatgtgtagccctagtatctataatagtaattaagggagtactattaatgaaacatgtacctcttatcagatgatcctcattcgctttctg 24460  T
Q  108 tgtacctgccaatgcaaacacctttccac 136  Q
     |||||||| || ||||||||||| ||||    
T  24461 agtacctgctaaagcaaacaccttcccac 24489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 6 - 98
Target Start/End: Complemental strand, 195089 - 194997
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatt 98  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||| ||   |||| |||||||| || || || ||||||||    
T  195089 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattatcaatataacatgtacctctaatcaggcgatcctcatt 194997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 6 - 337
Target Start/End: Complemental strand, 9602 - 9271
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| |||||||| ||| ||||| ||||||||||| ||| |||||||||||| | |||   ||| |||||||| || | ||| ||||||||  || |     
T  9602 agcaataaaacaatgcgtagcaccagtatcaataatatcaactaaaggagtactttcaaaatgacatgtacctctaatcaatcgatcctcattctctatc 9503  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    |||||||| | ||| ||||||||  | | |   ||||| ||||||||||| ||| |||| || |||| || ||||||||| || |  || || || || |    
T  9502 tgtgtaccagtcaaagcaaacactctcctagtggtctgcgccttcttaggcttcttgcattgtgaaccaatatgaccttcctcattgcagttaaaacaca 9403  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    ||| ||||    |||| ||||| |  || |||||||| ||||| |||||  ||||||||  |||| ||||  || | ||  |||||||||||||||||||    
T  9402 caacatcataatgcttacattctgtaatagtatgccccttcttaccacaacggaagcaccgtttcacatctccagtacaagcattactcttgtggccctt 9303  T
Q  306 ctcaccacacttgtagcaaacaatctcagtag 337  Q
    |||||||||  | |||||||||||||||||||    
T  9302 ctcaccacaagtatagcaaacaatctcagtag 9271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 6 - 98
Target Start/End: Complemental strand, 23549 - 23457
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatt 98  Q
    |||||| |||||||| ||| ||| | ||||||||||||||| |||||||||||||| |||  |||| ||||||||||| | ||| ||||||||    
T  23549 agcaataaaacaatgcgtagcactattatcaataatagcaactaaaggagtactatcaaaataacacgtacctctgattaatcgatcctcatt 23457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0605 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0605
Description:

Target: scaffold0605; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 37 - 95
Target Start/End: Original strand, 1364 - 1422
Alignment:
Q  37 ataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctc 95  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  1364 ataatagctattaaaggagtactattcaagaaacaagtacctctgataagtcgatcctc 1422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 6 - 188
Target Start/End: Original strand, 11081 - 11263
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| |||||||| |||  |||| ||||||||||| |||||||| ||||||||| |||| |||| |||||||| || |  || ||||||||  ||||     
T  11081 agcaataaaacaatgagtagtaccagtatcaataataacaattaaatgagtactatcaaagtaacatgtacctctaatcaaacgatcctcattctctgtt 11180  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttc 188  Q
    || ||||| | ||| ||||||||  | |||    |||||||||||||||| ||| |||| |||||||| | ||||||||||||    
T  11181 tgcgtaccagtcaaagcaaacactctaccagtattctgagccttcttaggtttcttgcattgcgaactgatatgaccttcttc 11263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 36551 - 36628
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    ||||||||||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   ||||||||||||||||    
T  36551 agcaatgaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatataacaagtacctctgat 36628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 286 - 369
Target Start/End: Complemental strand, 23894 - 23811
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatca 369  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||  |||  ||||||| ||||| || ||||| ||||||    
T  23894 acattactcttgtggcctttctcaccacacttgtatcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatca 23811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 286 - 372
Target Start/End: Complemental strand, 5873 - 5787
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattc 372  Q
    ||||||||||||||||| || ||||||||||||||  ||||||| ||||||||  ||||||| ||||| || ||||| |||||||||    
T  5873 acattactcttgtggcctttttcaccacacttgtaataaacaatatcagtaggagcatctctcctcttgggcctcctctcatcattc 5787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 110665 - 110727
Alignment:
Q  8 caatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaac 70  Q
    ||||||||||||| ||| ||||| |||| |||| |||||||||||||||||||||||||||||    
T  110665 caatgaaacaatgagtagcaccagtatctataacagcaattaaaggagtactattaaagaaac 110727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 286 - 372
Target Start/End: Original strand, 115957 - 116043
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattc 372  Q
    ||||||||||||||||| || ||||||||| || | |||||||| ||||||||  |||| || |||||||| ||||| |||||||||    
T  115957 acattactcttgtggcctttttcaccacacatgaaacaaacaatatcagtaggagcatccctcctcttaggcctcctctcatcattc 116043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 70 - 147
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||| ||||||| |||  ||||||||||||||||    
T  70 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggtgtactatcaaaataacaagtacctctgat 147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 4487 - 4564
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||| ||||||| |||  ||||||||||||||||    
T  4487 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggtgtactatcaaaataacaagtacctctgat 4564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 7990 - 7913
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| || ||||||||| ||||| ||||||||||||||| |||||| ||||||| |||  ||||||||||||||||    
T  7990 agcaataaagcaatgtgtagcaccagtatcaataatagcaactaaaggtgtactatcaaaataacaagtacctctgat 7913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 11317 - 11394
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||| ||||||| |||  ||||||||||||||||    
T  11317 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggtgtactatcaaaataacaagtacctctgat 11394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 14137 - 14193
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactatt 62  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||| ||||||||    
T  14137 agcaataaaacaatgcgtagcaccactatcaataatagcaactaaaggtgtactatt 14193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 25242 - 25287
Alignment:
Q  17 aatgtgtaacaccaatatcaataatagcaattaaaggagtactatt 62  Q
    |||| ||| ||||| |||||||||| ||||||||||||||||||||    
T  25242 aatgagtagcaccagtatcaataattgcaattaaaggagtactatt 25287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 41685 - 41762
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||||||| ||||| ||||||||||||||| |||||| ||||||| |||  |||| |||||||||||    
T  41685 agcaataaaacaatgtgtagcaccagtatcaataatagcaactaaaggtgtactatcaaaataacatgtacctctgat 41762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 75405 - 75482
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||||||| ||||| ||||||||||||||| |||||| ||||||| |||  |||| |||||||||||    
T  75405 agcaataaaacaatgtgtagcaccagtatcaataatagcaactaaaggtgtactatcaaaataacatgtacctctgat 75482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 13 - 213
Target Start/End: Complemental strand, 14510 - 14310
Alignment:
Q  13 aaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatgtgtac 112  Q
    |||||||||||| ||||| ||||||||| ||| |||||||||||| ||| |||| |||| ||||||||||| |  || ||||||||  |||| || ||||    
T  14510 aaacaatgtgtagcaccagtatcaataaaagctattaaaggagtaatatcaaagtaacatgtacctctgatcaaacgatcctcattctctgtctgcgtac 14411  T
Q  113 ctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaacaatatc 212  Q
    | | ||| ||||| ||  | |||   |||||  |||||||||| ||| | || ||||||| || |||||||||||| |  |||||||| || |||| |||    
T  14410 cagtcaaagcaaaaactctcccagtagtctgcaccttcttaggcttcttacattgcgaaccaatatgaccttcttcattgcaattgaaacatacaacatc 14311  T
Q  213 a 213  Q
    |    
T  14310 a 14310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 200
Target Start/End: Complemental strand, 57863 - 57671
Alignment:
Q  8 caatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatg 107  Q
    |||| |||||||||||| ||||| ||||||||||||||| |||||| ||||||| |||  |||| ||||||||||| |  ||  |||||||  |||| ||    
T  57863 caataaaacaatgtgtagcaccagtatcaataatagcaactaaaggtgtactatcaaaataacatgtacctctgatcaaacgagcctcattctctgtctg 57764  T
Q  108 tgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaa 200  Q
     ||||| | ||| ||||| ||  | | |   ||||| ||||||||||| ||| | || ||||||| || |||||||||||| | |||||||||    
T  57763 cgtaccagtcaaagcaaaaactctcctagtagtctgcgccttcttaggcttcttacattgcgaaccaatatgaccttcttcattacaattgaa 57671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 125
Target Start/End: Complemental strand, 15830 - 15711
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| |||||||| ||| ||||| |||||||||| |||| |||||||||| ||||||   |||||||||||||||| |  || ||||||||  | ||     
T  15830 agcaattaaacaatgcgtagcaccagtatcaataattgcaactaaaggagtattattaatataacaagtacctctgatcaagcgatcctcattctcggtc 15731  T
Q  106 tgtgtacctgccaatgcaaa 125  Q
    |||||||| ||||| |||||    
T  15730 tgtgtaccagccaaagcaaa 15711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 213
Target Start/End: Original strand, 3604 - 3811
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| |||||||| ||| ||||| ||||||| ||||||| |||||| ||||||| |||  |||||||||||||||| |  || ||||| ||  | ||     
T  3604 agcaataaaacaatgcgtagcaccagtatcaatgatagcaactaaaggtgtactatcaaaataacaagtacctctgatcaagcgatcctcgttctcagtc 3703  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    || ||||| | ||||||||| ||  | |||   ||||| ||||||||||| ||| ||||||| |||| ||  |||||||| || |  ||||| ||||| |    
T  3704 tgagtaccagtcaatgcaaaaactctaccagtagtctgcgccttcttaggcttcttgcactgtgaaccaatgtgaccttcctcattgcaattaaagcaca 3803  T
Q  206 caatatca 213  Q
    ||||||||    
T  3804 caatatca 3811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0550 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0550
Description:

Target: scaffold0550; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 10409 - 10332
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||  ||||| ||||||||||||||| |||||||||| ||||||   ||||||||||||||||    
T  10409 agcaataaaacaatgcgtggcaccagtatcaataatagcaactaaaggagtattattaatataacaagtacctctgat 10332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 8463 - 8540
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  8463 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 8540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 29179 - 29102
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| || ||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   ||||||||||||||||    
T  29179 agcaataaatcaatgcgtagcaccattatcaataatagcaactaaaggagtattattaatataacaagtacctctgat 29102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 8276 - 8353
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||||||| ||| | ||||||||||||||| |||||| ||||||| | |  ||||||||||||||||    
T  8276 agcaataaaacaatgtgtagcactagtatcaataatagcaactaaaggcgtactatcacaataacaagtacctctgat 8353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 55721 - 55644
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| ||| |||| ||| ||||| ||||||||||||||| |||||| ||||||| |||  ||||||||||||||||    
T  55721 agcaataaaaaaatgcgtagcaccagtatcaataatagcaactaaaggtgtactatcaaaataacaagtacctctgat 55644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 22300 - 22377
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  22300 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 22377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 7289 - 7366
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  7289 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 7366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 3477 - 3554
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  3477 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 3554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 17213 - 17290
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| |||||||||||| || |||||||||  ||||||   ||||||||||||||||    
T  17213 agcaataaaacaatgcgtagcaccagtatcaataatagaaactaaaggagttttattaatataacaagtacctctgat 17290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 98
Target Start/End: Complemental strand, 15230 - 15138
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatt 98  Q
    |||||| |||||||| ||| ||||| ||| ||||||||||| |||||||||||||| |||  |||| |||||||| || | ||| ||||||||    
T  15230 agcaataaaacaatgcgtagcaccagtattaataatagcaactaaaggagtactatcaaaataacatgtacctctaatcaatcgatcctcatt 15138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 37; Significance: 0.00000000001; HSPs: 3)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 31936 - 32012
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctga 82  Q
    |||||| ||| |||| ||||||||| ||||||||||||||| |||||||||| ||||||   | |||||||||||||    
T  31936 agcaataaaataatgcgtaacaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctga 32012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 37402 - 37478
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctga 82  Q
    |||||| ||| |||| ||||||||| ||||||||||||||| |||||||||| ||||||   | |||||||||||||    
T  37402 agcaataaaataatgcgtaacaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctga 37478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 54690 - 54767
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||||||||||||||||||| |||||| ||| ||| ||   | ||||||||||||||    
T  54690 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaaaggtgtattatcaatatagcaagtacctctgat 54767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1600 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold1600
Description:

Target: scaffold1600; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 334
Target Start/End: Original strand, 405 - 452
Alignment:
Q  287 cattactcttgtggcccttctcaccacacttgtagcaaacaatctcag 334  Q
    ||||||||||||||||||||||||||||  | ||||||||||||||||    
T  405 cattactcttgtggcccttctcaccacaagtatagcaaacaatctcag 452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 121 - 188
Target Start/End: Complemental strand, 1159 - 1092
Alignment:
Q  121 gcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttc 188  Q
    ||||| ||||| ||||| || || ||||||||||| ||| ||||||||||||||| ||||||||||||    
T  1159 gcaaaaaccttcccaccagtttgggccttcttaggcttcttgcactgcgaactaatatgaccttcttc 1092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 201 - 268
Alignment:
Q  13 aaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctct 80  Q
    |||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   |||||||||||||    
T  201 aaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatataacaagtacctct 268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 333
Target Start/End: Original strand, 6926 - 7253
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| |||||||| ||| ||||| ||||||||||| || |||||||||||| || | |  |||| ||||||||||| |  || ||||||||  ||||     
T  6926 agcaataaaacaatgcgtagcaccagtatcaataataacagttaaaggagtacgatcacaataacatgtacctctgatcaaacgatcctcattctctgtc 7025  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    || ||||| | ||| ||||| ||  | |||   ||||| ||||||||||| ||| | || ||||||| || ||||||||| || |  |||||||| || |    
T  7026 tgagtaccagtcaaagcaaaaactctcccagtagtctgtgccttcttaggcttcttacattgcgaaccaatatgaccttcctcattgcaattgaaacaca 7125  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    ||| |||| |  |||| || || || |  |||||||||||||| |||||  | ||||||| |||| | ||   |   ||  |||||||||| ||||| ||    
T  7126 caacatcatcatgcttacactcagcaagtgtatgccctttcttaccacaacgaaagcactgtttcacgtccctaggacaagcattactcttatggccttt 7225  T
Q  306 ctcaccacacttgtagcaaacaatctca 333  Q
    |||||||||  | |||||||||||||||    
T  7226 ctcaccacaagtatagcaaacaatctca 7253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 333
Target Start/End: Original strand, 14056 - 14383
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| |||||||| ||| ||||| ||||||||||| || |||||||||||| || | |  |||| ||||||||||| |  || ||||||||  ||||     
T  14056 agcaataaaacaatgcgtagcaccagtatcaataataacagttaaaggagtacgatcacaataacatgtacctctgatcaaacgatcctcattctctgtc 14155  T
Q  106 tgtgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaa 205  Q
    || ||||| | ||| ||||| ||  | |||   ||||| ||||||||||| ||| | || ||||||| || ||||||||| || |  |||||||| || |    
T  14156 tgagtaccagtcaaagcaaaaactctcccagtagtctgtgccttcttaggcttcttacattgcgaaccaatatgaccttcctcattgcaattgaaacaca 14255  T
Q  206 caatatcaccgcgcttgcattccgctatcgtatgccctttcttcccacattggaagcactttttctcatcaacattgcagacattactcttgtggccctt 305  Q
    ||| |||| |  |||| || || || |  |||||||||||||| |||||  | ||||||| |||| | ||   |   ||  |||||||||| ||||| ||    
T  14256 caacatcatcatgcttacactcagcaagtgtatgccctttcttaccacaacgaaagcactgtttcacgtccctaggacaagcattactcttatggccttt 14355  T
Q  306 ctcaccacacttgtagcaaacaatctca 333  Q
    |||||||||  | |||||||||||||||    
T  14356 ctcaccacaagtatagcaaacaatctca 14383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 399
Target Start/End: Complemental strand, 33337 - 33230
Alignment:
Q  292 ctcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgt 391  Q
    ||||||||||| || |||||||||||| | |||||||| |||  |||  ||||||| ||||| || ||||| |||||||||   || ||||| |||||||    
T  33337 ctcttgtggcctttttcaccacacttgaaacaaacaatttcaacaggagcatctctcctcttgggcctcctctcatcattcatcctctgttttcctttgt 33238  T
Q  392 cagcagga 399  Q
    ||||||||    
T  33237 cagcagga 33230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 121 - 184
Target Start/End: Original strand, 25640 - 25703
Alignment:
Q  121 gcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgacctt 184  Q
    ||||| ||||| ||||| ||||| ||||||||||| ||| ||||||||||||||| ||||||||    
T  25640 gcaaaaaccttcccaccagtctgggccttcttaggcttcttgcactgcgaactaatatgacctt 25703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 37071 - 37020
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagta 57  Q
    |||||| |||||||||||| ||||| ||||||||||||||| ||||||||||    
T  37071 agcaataaaacaatgtgtagcaccagtatcaataatagcaactaaaggagta 37020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 188
Target Start/End: Original strand, 26407 - 26587
Alignment:
Q  8 caatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatg 107  Q
    |||| ||||| || ||| ||||||||||||||||||||| |||| ||||||||| |||  ||||  ||||||| || | ||| ||||||||  |||| ||    
T  26407 caataaaacattgcgtagcaccaatatcaataatagcaactaaaagagtactatcaaaataacatttacctctaatcaatcgatcctcattctctgtctg 26506  T
Q  108 tgtacctgccaatgcaaacacctttccacctgtctgagccttcttagggttcctgcactgcgaactaagatgaccttcttc 188  Q
     ||||| |  || ||||||||  | ||||  ||| | ||||||||| | ||| ||||| |||| | || ||||||||||||    
T  26507 cgtaccagtaaaagcaaacactctcccactcgtcggcgccttcttatgcttcttgcacagcgagccaatatgaccttcttc 26587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0993 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0993
Description:

Target: scaffold0993; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 1035 - 1093
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaa 64  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||| ||||||||||    
T  1035 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggtgtactattaa 1093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 398
Target Start/End: Original strand, 3216 - 3310
Alignment:
Q  304 ttctcaccacacttgtagcaaacaatctcagtaggcacatctcttctcttaggtctcctttcatcattctaactttgtttccctttgtcagcagg 398  Q
    ||||| ||||||||| |||||| ||||||||||||  ||||||| ||||| || ||||| ||||||||| | || || || || |||||||||||    
T  3216 ttctccccacacttgaagcaaataatctcagtaggagcatctctcctcttgggcctcctctcatcattcaatctctgcttacccttgtcagcagg 3310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 2924 - 2994
Alignment:
Q  13 aaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||||| ||| ||||| ||||||||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  2924 aaacaatgcgtagcaccagtatcaataatagcaactaatggagtattattaatataacaagtacctctgat 2994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 35; Significance: 0.0000000002; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 81
Target Start/End: Original strand, 17991 - 18065
Alignment:
Q  7 gcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctg 81  Q
    ||||| || ||||| ||| ||||| |||||||||||||||||||||||||| ||||||   | ||||||||||||    
T  17991 gcaataaagcaatgagtagcaccagtatcaataatagcaattaaaggagtattattaatatagcaagtacctctg 18065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 83
Target Start/End: Original strand, 11523 - 11599
Alignment:
Q  7 gcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    ||||| || ||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  11523 gcaataaagcaatgagtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 11599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 83
Target Start/End: Original strand, 55058 - 55134
Alignment:
Q  7 gcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    ||||| || ||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  55058 gcaataaagcaatgagtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 55134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2059 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold2059
Description:

Target: scaffold2059; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 1020 - 943
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| || ||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  1020 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1423 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold1423
Description:

Target: scaffold1423; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 629 - 552
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||| ||| ||| ||   ||||||||||||||||    
T  629 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggtgtattatcaatataacaagtacctctgat 552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 4638 - 4691
Alignment:
Q  8 caatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactat 61  Q
    |||| |||||||| ||| ||||||||||||||||||||| |||||| |||||||    
T  4638 caataaaacaatgcgtagcaccaatatcaataatagcaactaaaggtgtactat 4691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 10421 - 10498
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| || ||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  10421 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 10498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 18703 - 18780
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||| | ||||||||||| ||| |||||| ||||||| |||  ||||||||||||||||    
T  18703 agcaataaaacaatgcgtagcactagtatcaataatatcaactaaaggtgtactatcaaaataacaagtacctctgat 18780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 2042 - 2119
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| ||| |||| ||| ||||| ||||||||||||||| |||||| ||||||| |||  ||||||||| ||||||    
T  2042 agcaataaaaaaatgcgtagcaccagtatcaataatagcaactaaaggtgtactatcaaaataacaagtacttctgat 2119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 345
Target Start/End: Original strand, 2323 - 2381
Alignment:
Q  287 cattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggcacatct 345  Q
    |||| ||||||||||| |||||||||||  | ||||| |||||||||||||| ||||||    
T  2323 cattgctcttgtggcctttctcaccacaagtatagcacacaatctcagtaggaacatct 2381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 8311 - 8388
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| || ||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  8311 agcaataaagcaatgagtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 8388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 40758 - 40681
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| |||||||||| |||| |||||| ||||||| |||  | ||||||||||||||    
T  40758 agcaataaaacaatgcgtagcaccagtatcaataatggcaactaaaggtgtactatcaaaatagcaagtacctctgat 40681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 13375 - 13298
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| || ||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  13375 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 13298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 15979 - 16019
Alignment:
Q  22 gtaacaccaatatcaataatagcaattaaaggagtactatt 62  Q
    |||||||||||||||||||| ||||| ||||||||||||||    
T  15979 gtaacaccaatatcaataattgcaatcaaaggagtactatt 16019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 3556 - 3608
Alignment:
Q  10 atgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactatt 62  Q
    |||||| |||| ||| |||||||||||||||| ||||| ||||||||||||||    
T  3556 atgaaagaatgagtagcaccaatatcaataattgcaatcaaaggagtactatt 3608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 83
Target Start/End: Original strand, 48719 - 48795
Alignment:
Q  7 gcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    ||||| || ||||| ||| ||||| ||||||||||||||| |||||||||| ||||||   | ||||||||||||||    
T  48719 gcaataaagcaatgagtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 48795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1459 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1459
Description:

Target: scaffold1459; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 113
Target Start/End: Complemental strand, 1263 - 1176
Alignment:
Q  26 caccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtatgtgtacc 113  Q
    ||||| ||||||||||||||| |||||||||| ||||||   ||||||| |||||||| ||  | ||||||||  |||| ||||||||    
T  1263 caccagtatcaataatagcaactaaaggagtattattaatataacaagttcctctgattaggagatcctcattctctgtctgtgtacc 1176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 2514 - 2407
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgta 105  Q
    |||||| ||| |||| ||| ||||| ||||||||||||||| |||||| ||| ||||||   | |||||||||||||| |  || ||||||||  ||||     
T  2514 agcaataaaagaatgcgtagcaccagtatcaataatagcaactaaaggtgtattattaatatagcaagtacctctgatcaagcgatcctcattctctgtc 2415  T
Q  106 tgtgtacc 113  Q
    ||||||||    
T  2414 tgtgtacc 2407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 93 - 144
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagta 57  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| ||||||||||    
T  93 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagta 144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 11607 - 11533
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctct 80  Q
    |||||| || ||||| ||| ||||| |||||||||||| || |||||||||| ||||||   |||||||||||||    
T  11607 agcaataaagcaatgcgtagcaccagtatcaataatagaaactaaaggagtattattaatataacaagtacctct 11533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 80
Target Start/End: Original strand, 104280 - 104354
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctct 80  Q
    |||||| |||||||| ||| ||||| |||||||||||| || |||||| ||||||| |||  |||| ||||||||    
T  104280 agcaataaaacaatgcgtagcaccattatcaataatagaaactaaaggtgtactatcaaaataacatgtacctct 104354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 104561 - 104606
Alignment:
Q  288 attactcttgtggcccttctcaccacacttgtagcaaacaatctca 333  Q
    ||||||||||||||| |||||||||||  | |||||||||||||||    
T  104561 attactcttgtggcctttctcaccacaagtatagcaaacaatctca 104606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 13571 - 13502
Alignment:
Q  17 aatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataag 86  Q
    |||| ||| ||||| |||||||||| ||||| |||||||||||||| |  |||||  |||||||||||||    
T  13571 aatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctctgataag 13502  T

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Target: scaffold0403 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 14964 - 15041
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| |||||||| ||| ||||| ||||||||||||||| |||||| ||| ||| ||   | ||||||||||||||    
T  14964 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggtgtattatcaatatagcaagtacctctgat 15041  T

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Target: scaffold0081 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 21657 - 21734
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| ||| |||| ||| |||| |||||||||||||||| ||| |||||| ||||||   |||| |||||||||||    
T  21657 agcaataaaataatgcgtagcaccgatatcaataatagcaactaagggagtattattaatataacatgtacctctgat 21734  T

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Target: scaffold0081; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 37081 - 37158
Alignment:
Q  6 agcaatgaaacaatgtgtaacaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 83  Q
    |||||| ||| |||| ||| |||| |||||||||||||||| ||| |||||| ||||||   |||| |||||||||||    
T  37081 agcaataaaataatgcgtagcaccgatatcaataatagcaactaagggagtattattaatataacatgtacctctgat 37158  T

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Target: scaffold0819 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 145 - 213
Target Start/End: Original strand, 306 - 374
Alignment:
Q  145 gccttcttagggttcctgcactgcgaactaagatgaccttcttcgtcacaattgaagcaaacaatatca 213  Q
    ||||||||||| | | ||||||| ||||||| |||||| ||||| |  ||||||||||| |||||||||    
T  306 gccttcttaggctgcttgcactgagaactaatatgaccctcttctttgcaattgaagcacacaatatca 374  T

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Target: scaffold0008 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 286 - 334
Target Start/End: Complemental strand, 139581 - 139533
Alignment:
Q  286 acattactcttgtggcccttctcaccacacttgtagcaaacaatctcag 334  Q
    ||||||||||||||||| ||||||||||| ||| |||||  ||||||||    
T  139581 acattactcttgtggcctttctcaccacaattgaagcaagtaatctcag 139533  T

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