View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11342_low_34 (Length: 206)
Name: NF11342_low_34
Description: NF11342
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11342_low_34 |
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Alignment Details
Target: chr4 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 32266822 - 32266717
Alignment:
| Q |
24 |
tttgtgttgctgctacaacaatgaatctaaggaaatctaagagaagagttaggttcaagtctattactctttcaaatcatcaaccttcttcttcttctgt |
123 |
Q |
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| T |
32266822 |
tttgtgttgctgctacaacaatgaatctaaggaaatctaagagaagaattaggttcaagtctattactctttcaaatcagcaaccttcttcttcttctgt |
32266723 |
T |
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| Q |
124 |
taatgg |
129 |
Q |
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|||||| |
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| T |
32266722 |
taatgg |
32266717 |
T |
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