View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11342_low_36 (Length: 206)

Name: NF11342_low_36
Description: NF11342
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11342_low_36
NF11342_low_36
[»] chr8 (21 HSPs)
chr8 (37-176)||(31708873-31709012)
chr8 (37-176)||(31711093-31711232)
chr8 (61-176)||(14369722-14369837)
chr8 (61-176)||(14370273-14370388)
chr8 (61-176)||(14366133-14366248)
chr8 (62-185)||(21834817-21834940)
chr8 (29-176)||(21938570-21938718)
chr8 (73-176)||(20131837-20131940)
chr8 (68-185)||(21408360-21408477)
chr8 (68-185)||(21802852-21802969)
chr8 (62-185)||(14676564-14676687)
chr8 (61-172)||(20134964-20135075)
chr8 (62-176)||(14673358-14673472)
chr8 (38-159)||(21936069-21936191)
chr8 (62-174)||(3300085-3300196)
chr8 (62-176)||(36281313-36281427)
chr8 (62-185)||(3303151-3303274)
chr8 (66-169)||(16077838-16077941)
chr8 (66-169)||(17526645-17526748)
chr8 (29-67)||(16907080-16907118)
chr8 (72-161)||(2406-2495)
[»] chr4 (8 HSPs)
chr4 (46-176)||(10968712-10968842)
chr4 (46-173)||(10970391-10970518)
chr4 (46-176)||(10754943-10755073)
chr4 (46-173)||(10757220-10757347)
chr4 (29-176)||(23882318-23882466)
chr4 (38-172)||(23878679-23878813)
chr4 (44-185)||(27789024-27789167)
chr4 (71-169)||(30953168-30953266)
[»] chr2 (13 HSPs)
chr2 (37-176)||(4876753-4876892)
chr2 (45-176)||(3071585-3071717)
chr2 (62-176)||(29603803-29603917)
chr2 (44-176)||(23692708-23692841)
chr2 (44-176)||(23696495-23696628)
chr2 (62-176)||(7310907-7311021)
chr2 (62-176)||(45278935-45279049)
chr2 (62-176)||(45286234-45286348)
chr2 (71-185)||(5771860-5771974)
chr2 (62-176)||(26126106-26126220)
chr2 (71-169)||(26383947-26384045)
chr2 (62-127)||(26120693-26120758)
chr2 (71-158)||(26382128-26382215)
[»] chr3 (24 HSPs)
chr3 (49-185)||(8854128-8854264)
chr3 (29-176)||(94566-94713)
chr3 (46-185)||(8368267-8368407)
chr3 (61-176)||(16091838-16091953)
chr3 (44-185)||(17601662-17601804)
chr3 (61-176)||(16082662-16082777)
chr3 (73-176)||(103428-103531)
chr3 (44-185)||(17593654-17593796)
chr3 (71-185)||(18556648-18556762)
chr3 (55-176)||(14561097-14561218)
chr3 (44-176)||(38700146-38700279)
chr3 (44-176)||(10813028-10813162)
chr3 (49-185)||(8856975-8857102)
chr3 (73-177)||(10776892-10776996)
chr3 (29-172)||(14566285-14566428)
chr3 (44-176)||(10815929-10816058)
chr3 (71-185)||(26900610-26900724)
chr3 (63-169)||(15926752-15926858)
chr3 (63-176)||(14789744-14789859)
chr3 (71-185)||(26907219-26907328)
chr3 (126-185)||(15417785-15417844)
chr3 (65-176)||(19767698-19767811)
chr3 (71-179)||(14429821-14429929)
chr3 (71-179)||(14433306-14433414)
[»] scaffold0878 (1 HSPs)
scaffold0878 (37-176)||(4213-4352)
[»] scaffold0369 (1 HSPs)
scaffold0369 (37-176)||(7522-7661)
[»] chr7 (16 HSPs)
chr7 (46-176)||(23532535-23532665)
chr7 (61-185)||(15932299-15932423)
chr7 (61-176)||(11527319-11527434)
chr7 (61-176)||(11544724-11544839)
chr7 (73-176)||(44360128-44360231)
chr7 (61-172)||(44356996-44357107)
chr7 (45-176)||(11100123-11100255)
chr7 (50-158)||(23522322-23522430)
chr7 (88-176)||(30218049-30218137)
chr7 (38-169)||(43173456-43173587)
chr7 (76-169)||(9066367-9066460)
chr7 (66-158)||(18016850-18016942)
chr7 (71-158)||(9070320-9070407)
chr7 (71-169)||(9214617-9214715)
chr7 (71-158)||(6201929-6202016)
chr7 (78-158)||(21775957-21776037)
[»] scaffold1778 (1 HSPs)
scaffold1778 (53-185)||(983-1115)
[»] scaffold0179 (2 HSPs)
scaffold0179 (29-185)||(27455-27611)
scaffold0179 (73-185)||(24840-24952)
[»] scaffold0018 (1 HSPs)
scaffold0018 (37-176)||(194565-194704)
[»] chr6 (19 HSPs)
chr6 (29-176)||(20090496-20090643)
chr6 (61-176)||(19573686-19573801)
chr6 (61-176)||(11231301-11231416)
chr6 (46-176)||(23607040-23607170)
chr6 (62-176)||(16688550-16688664)
chr6 (62-176)||(19019315-19019429)
chr6 (62-185)||(8668073-8668196)
chr6 (46-176)||(19008535-19008665)
chr6 (45-176)||(17996870-17997002)
chr6 (46-176)||(18929435-18929565)
chr6 (62-176)||(19011684-19011798)
chr6 (61-176)||(19577308-19577419)
chr6 (62-176)||(22467530-22467644)
chr6 (62-169)||(16666272-16666379)
chr6 (62-176)||(8650043-8650157)
chr6 (45-155)||(13727716-13727827)
chr6 (62-169)||(25970119-25970227)
chr6 (62-169)||(25974559-25974667)
chr6 (63-169)||(11091875-11091981)
[»] chr5 (13 HSPs)
chr5 (29-185)||(8460127-8460283)
chr5 (49-185)||(26857453-26857589)
chr5 (29-185)||(40933164-40933322)
chr5 (65-176)||(26863705-26863816)
chr5 (29-185)||(40936559-40936717)
chr5 (29-130)||(32965734-32965835)
chr5 (62-176)||(38840668-38840782)
chr5 (62-176)||(38836749-38836863)
chr5 (63-169)||(27073681-27073787)
chr5 (71-169)||(20680193-20680291)
chr5 (66-169)||(19049727-19049830)
chr5 (66-158)||(20675116-20675208)
chr5 (71-169)||(20675445-20675543)
[»] chr1 (14 HSPs)
chr1 (29-176)||(12020250-12020397)
chr1 (46-176)||(19749495-19749625)
chr1 (29-176)||(24276854-24277001)
chr1 (46-176)||(19751721-19751851)
chr1 (32-174)||(24280969-24281111)
chr1 (62-185)||(15142666-15142789)
chr1 (61-176)||(20442500-20442615)
chr1 (38-176)||(18433159-18433296)
chr1 (61-176)||(20514361-20514476)
chr1 (62-185)||(15158092-15158215)
chr1 (62-169)||(20435263-20435370)
chr1 (61-176)||(36910500-36910611)
chr1 (63-172)||(20194842-20194951)
chr1 (137-169)||(30306538-30306570)
[»] scaffold0264 (1 HSPs)
scaffold0264 (38-176)||(13030-13168)
[»] scaffold0208 (1 HSPs)
scaffold0208 (29-176)||(1536-1683)
[»] scaffold0045 (1 HSPs)
scaffold0045 (47-176)||(78657-78786)
[»] scaffold0037 (1 HSPs)
scaffold0037 (38-173)||(20566-20702)
[»] scaffold0320 (1 HSPs)
scaffold0320 (45-185)||(12001-12141)
[»] scaffold0023 (2 HSPs)
scaffold0023 (61-176)||(149877-149993)
scaffold0023 (61-176)||(146670-146786)
[»] scaffold0202 (2 HSPs)
scaffold0202 (62-184)||(13874-13996)
scaffold0202 (62-184)||(10387-10509)
[»] scaffold0074 (1 HSPs)
scaffold0074 (62-176)||(56484-56598)
[»] scaffold1505 (1 HSPs)
scaffold1505 (62-176)||(445-559)
[»] scaffold0139 (1 HSPs)
scaffold0139 (45-176)||(2925-3057)
[»] scaffold0130 (2 HSPs)
scaffold0130 (62-185)||(14995-15118)
scaffold0130 (62-158)||(19021-19117)
[»] scaffold0167 (1 HSPs)
scaffold0167 (56-185)||(10469-10598)
[»] scaffold0123 (1 HSPs)
scaffold0123 (75-169)||(8776-8871)
[»] scaffold0071 (1 HSPs)
scaffold0071 (126-185)||(44394-44453)
[»] scaffold0716 (1 HSPs)
scaffold0716 (88-158)||(2145-2215)
[»] scaffold0013 (1 HSPs)
scaffold0013 (66-161)||(147450-147545)
[»] scaffold0438 (1 HSPs)
scaffold0438 (95-169)||(3924-3998)


Alignment Details
Target: chr8 (Bit Score: 116; Significance: 3e-59; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 37 - 176
Target Start/End: Original strand, 31708873 - 31709012
Alignment:
Q  37 ctatccgtggcgccgccttaatagtctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaa 136  Q
    ||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  31708873 ctatccgtggcaccgccttaataatctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccaaaacccaa 31708972  T
Q  137 gcccatagaagactataaataccacccttgagaacactct 176  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  31708973 gcccattgaagactataaataccacccttgagaacactct 31709012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 37 - 176
Target Start/End: Original strand, 31711093 - 31711232
Alignment:
Q  37 ctatccgtggcgccgccttaatagtctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaa 136  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  31711093 ctatccgtggcgccgccttaataatctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccaaaacccaa 31711192  T
Q  137 gcccatagaagactataaataccacccttgagaacactct 176  Q
    || ||| |||| ||||||||||||||||||||||||||||    
T  31711193 gctcattgaaggctataaataccacccttgagaacactct 31711232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 61 - 176
Target Start/End: Original strand, 14369722 - 14369837
Alignment:
Q  61 tctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaatacca 160  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||    
T  14369722 tctctagaaacttctagaaaccgccctaaatacacaaatacccctattacttggagactaagcaaccaaaatccaagcccatagaaggctataaatacca 14369821  T
Q  161 cccttgagaacactct 176  Q
    ||||||||||||||||    
T  14369822 cccttgagaacactct 14369837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 61 - 176
Target Start/End: Original strand, 14370273 - 14370388
Alignment:
Q  61 tctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaatacca 160  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||    
T  14370273 tctctagaaacttctagaaaccgccctaaatacacaaatacccctattacttggagactaagcaaccaaaatccaagcccatagaaggctataaatacca 14370372  T
Q  161 cccttgagaacactct 176  Q
    ||||||||||||||||    
T  14370373 cccttgagaacactct 14370388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 61 - 176
Target Start/End: Original strand, 14366133 - 14366248
Alignment:
Q  61 tctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaatacca 160  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||| ||||||||||| ||| ||||||||||||    
T  14366133 tctctagaaacttctagaaaccgccctaaatacacaaatacccctattacttggagactaagcaaccaaaatccaagcccatataaggctataaatacca 14366232  T
Q  161 cccttgagaacactct 176  Q
    ||||||||||||||||    
T  14366233 cccttgagaacactct 14366248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 62 - 185
Target Start/End: Original strand, 21834817 - 21834940
Alignment:
Q  62 ctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccac 161  Q
    |||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||    
T  21834817 ctctagaaccttctagaaaccgccctaaatacctaaatacccctattacttggagactaagcaaccgaaacccaagcccatagaaggctataaataccac 21834916  T
Q  162 ccttgagaacactctaaaatatcc 185  Q
    ||||||||||||||| || |||||    
T  21834917 ccttgagaacactctcaagtatcc 21834940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 29 - 176
Target Start/End: Original strand, 21938570 - 21938718
Alignment:
Q  29 ggcgcgctctatccgtggcgccgccttaatagtctctagaaacttctagaaaccgccc-taaatacataaatacccttattacttggagaccaagcaacc 127  Q
    |||||||  ||||| |||| |||||| |||| ||||||||| |||||||||||||||| |||||||||||||||||  ||||||||||||| ||||||||    
T  21938570 ggcgcgcattatccatggcaccgcctcaataatctctagaatcttctagaaaccgcccctaaatacataaatacccccattacttggagactaagcaacc 21938669  T
Q  128 aaaacccaagcccatagaagactataaataccacccttgagaacactct 176  Q
     ||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  21938670 gaaatccaagcccatagaaggctataaataccacccttgagaacactct 21938718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 73 - 176
Target Start/End: Complemental strand, 20131940 - 20131837
Alignment:
Q  73 tctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccacccttgagaaca 172  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  20131940 tctagaaaccgccctaaatacataaatacccctattatttggagactaagcaaccaagacccaagcccatagaagactataaataccacccttgagaaca 20131841  T
Q  173 ctct 176  Q
    ||||    
T  20131840 ctct 20131837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 68 - 185
Target Start/End: Original strand, 21408360 - 21408477
Alignment:
Q  68 aaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccacccttga 167  Q
    |||| ||||||||||||||||||||| ||||||||| |||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||    
T  21408360 aaacctctagaaaccgccctaaatacctaaatacccctattacttggagactaagcaaccgaaacccaagcccatagaaggctataaataccacccttga 21408459  T
Q  168 gaacactctaaaatatcc 185  Q
    ||||||||| || |||||    
T  21408460 gaacactctcaagtatcc 21408477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 68 - 185
Target Start/End: Original strand, 21802852 - 21802969
Alignment:
Q  68 aaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccacccttga 167  Q
    |||| ||||||||||||||||||||| ||||||||| |||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||    
T  21802852 aaacctctagaaaccgccctaaatacctaaatacccctattacttggagactaagcaaccgaaacccaagcccatagaaggctataaataccacccttga 21802951  T
Q  168 gaacactctaaaatatcc 185  Q
    ||||||||| || |||||    
T  21802952 gaacactctcaagtatcc 21802969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 62 - 185
Target Start/End: Original strand, 14676564 - 14676687
Alignment:
Q  62 ctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccac 161  Q
    |||||||| |||||||||||||||| |||||| |||||| || |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  14676564 ctctagaaccttctagaaaccgcccaaaatacctaaatatccctattacttggagactaagcaaccaaaacccaagcccatagaaggctataaataccac 14676663  T
Q  162 ccttgagaacactctaaaatatcc 185  Q
    |||| |||||||||| || |||||    
T  14676664 ccttcagaacactctcaagtatcc 14676687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 61 - 172
Target Start/End: Complemental strand, 20135075 - 20134964
Alignment:
Q  61 tctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaatacca 160  Q
    |||||||||| ||||| |||||||||||||||||||||||||| ||||| |||||||| |||||||||| ||||||||||||||||| ||||||||||||    
T  20135075 tctctagaaatttctataaaccgccctaaatacataaatacccctattatttggagactaagcaaccaagacccaagcccatagaaggctataaatacca 20134976  T
Q  161 cccttgagaaca 172  Q
    ||||||||||||    
T  20134975 cccttgagaaca 20134964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 62 - 176
Target Start/End: Original strand, 14673358 - 14673472
Alignment:
Q  62 ctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccac 161  Q
    |||||||| |||||||||||||||| |||||| |||||| || |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  14673358 ctctagaaccttctagaaaccgcccaaaatacctaaatatccctattacttggagactaagcaaccaaaacccaagcccatagaaggctataaataccac 14673457  T
Q  162 ccttgagaacactct 176  Q
    |||| ||||||||||    
T  14673458 ccttcagaacactct 14673472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 38 - 159
Target Start/End: Original strand, 21936069 - 21936191
Alignment:
Q  38 tatccgtggcgccgccttaatagtctctagaaacttctagaaaccgccc-taaatacataaatacccttattacttggagaccaagcaaccaaaacccaa 136  Q
    ||||| ||||||||||| |||| ||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||| ||||||||    
T  21936069 tatccatggcgccgcctcaataatctctagaatcttctagaaaccgcccctaaatacataaatacccctattacttggagactaagcaaccgaaacccaa 21936168  T
Q  137 gcccatagaagactataaatacc 159  Q
    | ||||||||| |||||||||||    
T  21936169 gtccatagaaggctataaatacc 21936191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 62 - 174
Target Start/End: Original strand, 3300085 - 3300196
Alignment:
Q  62 ctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccac 161  Q
    ||||||||  ||||||||||||||| |||  | |||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  3300085 ctctagaactttctagaaaccgcccaaaaggcctaaataccct-attacttggagactaagcaaccaaaacccaagcccatagaagagtataaataccac 3300183  T
Q  162 ccttgagaacact 174  Q
    |||||||||||||    
T  3300184 ccttgagaacact 3300196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 62 - 176
Target Start/End: Complemental strand, 36281427 - 36281313
Alignment:
Q  62 ctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccac 161  Q
    |||||||| |||||||| | ||||| |||||| ||||||||| |||||||||||||| |||||| ||||||||||||||||||| | ||||||||| |||    
T  36281427 ctctagaaccttctagagatcgcccaaaatacctaaatacccctattacttggagactaagcaatcaaaacccaagcccatagagggctataaatatcac 36281328  T
Q  162 ccttgagaacactct 176  Q
    |||||||||||||||    
T  36281327 ccttgagaacactct 36281313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 62 - 185
Target Start/End: Original strand, 3303151 - 3303274
Alignment:
Q  62 ctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccac 161  Q
    ||||||||  |||||||||||| || |||  | ||||||||| |||||||||||||  ||||||||| ||||||||| |||||||| |||||||||||||    
T  3303151 ctctagaactttctagaaaccgtccaaaaggcctaaatacccctattacttggagattaagcaaccacaacccaagctcatagaaggctataaataccac 3303250  T
Q  162 ccttgagaacactctaaaatatcc 185  Q
     |||||||||||||| || |||||    
T  3303251 acttgagaacactctcaagtatcc 3303274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 66 - 169
Target Start/End: Complemental strand, 16077941 - 16077838
Alignment:
Q  66 agaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccaccctt 165  Q
    |||| |||| ||||| ||||  |||||||||||||||| | || ||||||  |||||||||| |||||||||||||||| || |||||||||| || |||    
T  16077941 agaagcttccagaaagcgcctaaaatacataaatacccatgttgcttggaagccaagcaaccgaaacccaagcccatagcaggctataaatactactctt 16077842  T
Q  166 gaga 169  Q
    ||||    
T  16077841 gaga 16077838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 169
Target Start/End: Complemental strand, 17526748 - 17526645
Alignment:
Q  66 agaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccaccctt 165  Q
    |||| |||| ||||||||||  |||||||||||||||| | || |||||   |||||||||| |||||||||| ||||  || |||||||||| || |||    
T  17526748 agaagcttccagaaaccgcctaaaatacataaatacccctgttgcttgggagccaagcaaccgaaacccaagctcataacaggctataaatactactctt 17526649  T
Q  166 gaga 169  Q
    ||||    
T  17526648 gaga 17526645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 67
Target Start/End: Complemental strand, 16907118 - 16907080
Alignment:
Q  29 ggcgcgctctatccgtggcgccgccttaatagtctctag 67  Q
    ||||||| ||||||||||||||||||||||| |||||||    
T  16907118 ggcgcgcactatccgtggcgccgccttaataatctctag 16907080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 72 - 161
Target Start/End: Complemental strand, 2495 - 2406
Alignment:
Q  72 ttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccac 161  Q
    ||||||||||||||  ||||||  ||||| || | || ||||||| ||||||||    |||||||||||| || ||||||||||||||||    
T  2495 ttctagaaaccgcctaaaatactaaaatatccctgttgcttggaggccaagcaatagtaacccaagcccacagcagactataaataccac 2406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 115; Significance: 1e-58; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 46 - 176
Target Start/End: Original strand, 10968712 - 10968842
Alignment:
Q  46 gcgccgccttaatagtctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccataga 145  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  10968712 gcgccgccttaatagtctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccaaaacccaagcccataga 10968811  T
Q  146 agactataaataccacccttgagaacactct 176  Q
    || ||||||||||||||||||||||||||||    
T  10968812 aggctataaataccacccttgagaacactct 10968842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 46 - 173
Target Start/End: Original strand, 10970391 - 10970518
Alignment:
Q  46 gcgccgccttaatagtctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccataga 145  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  10970391 gcgccgccttaatagtctctagaatcttctagaaaccgccctaaatacataaatacccttattacttggagactaagcaaccaaaacccaagcccataga 10970490  T
Q  146 agactataaataccacccttgagaacac 173  Q
    || ||| |||||||||||||||||||||    
T  10970491 aggctacaaataccacccttgagaacac 10970518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 46 - 176
Target Start/End: Original strand, 10754943 - 10755073
Alignment:
Q  46 gcgccgccttaatagtctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccataga 145  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  10754943 gcgccgccttaatagtctctaaaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccaaaacccaagcccataga 10755042  T
Q  146 agactataaataccacccttgagaacactct 176  Q
    || ||||||||||||||||||||||||||||    
T  10755043 aggctataaataccacccttgagaacactct 10755073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 46 - 173
Target Start/End: Original strand, 10757220 - 10757347
Alignment:
Q  46 gcgccgccttaatagtctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccataga 145  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  10757220 gcgccgccttaatagtctctagaatcttctagaaaccgccctaaatacataaatacccatattacttggagactaagcaaccaaaacccaagcccataga 10757319  T
Q  146 agactataaataccacccttgagaacac 173  Q
    || ||| |||||||||||||||||||||    
T  10757320 aggctacaaataccacccttgagaacac 10757347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 29 - 176
Target Start/End: Original strand, 23882318 - 23882466
Alignment:
Q  29 ggcgcgctctatccgtggcgccgccttaatagtctctagaaacttctagaaaccgccc-taaatacataaatacccttattacttggagaccaagcaacc 127  Q
    |||||||  ||||| ||||||||||| |||| ||| ||||| |||||||||||||||| ||||||||||||||||| |||||||||||| | ||||||||    
T  23882318 ggcgcgcattatccatggcgccgcctcaataatctttagaatcttctagaaaccgcccctaaatacataaatacccctattacttggagtctaagcaacc 23882417  T
Q  128 aaaacccaagcccatagaagactataaataccacccttgagaacactct 176  Q
     ||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  23882418 gaaacccaagcccatagaaggctataaataccacccttgacaacactct 23882466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 23878679 - 23878813
Alignment:
Q  38 tatccgtggcgccgccttaatagtctctagaaacttctagaaaccgcc-ctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaa 136  Q
    ||||| |||| |||||| |||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  23878679 tatccatggcaccgcctcaataatctctagaatcttctagaaaccgcctctaaatacataaatacccttattacttggagactaagcaaccgaaacccaa 23878778  T
Q  137 gcccatagaagactataaataccacccttgagaaca 172  Q
    || |||||||| ||||||||||||||||||||||||    
T  23878779 gctcatagaag-ctataaataccacccttgagaaca 23878813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 44 - 185
Target Start/End: Original strand, 27789024 - 27789167
Alignment:
Q  44 tggcgccgccttaatagtctctagaaacttctagaaaccgccc-taaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcc-ca 141  Q
    ||||||||||| |||| ||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||| |||||||||||  |    
T  27789024 tggcgccgcctcaataatctctagaatcttctagaaaccgcccctaaatacataaatagccttattacttggagactaagcaaccgaaacccaagcctaa 27789123  T
Q  142 tagaagactataaataccacccttgagaacactctaaaatatcc 185  Q
     | ||| |||||||||||||||||||||||||||| || |||||    
T  27789124 aaaaaggctataaataccacccttgagaacactctcaagtatcc 27789167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 169
Target Start/End: Original strand, 30953168 - 30953266
Alignment:
Q  71 cttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccacccttgaga 169  Q
    |||| |||| |||||  |||||||||||||||| | || |||||   |||||||||| |||||||||||||||| || |||||||||| || |||||||    
T  30953168 cttccagaagccgcctaaaatacataaatacccctgttgcttgggagccaagcaaccgaaacccaagcccatagcaggctataaatactactcttgaga 30953266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 112; Significance: 8e-57; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 37 - 176
Target Start/End: Original strand, 4876753 - 4876892
Alignment:
Q  37 ctatccgtggcgccgccttaatagtctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaa 136  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  4876753 ctatccgtggcgccgccttaataatctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccaaaacccaa 4876852  T
Q  137 gcccatagaagactataaataccacccttgagaacactct 176  Q
    || ||| |||| ||||||||||||||||||||||||||||    
T  4876853 gctcattgaaggctataaataccacccttgagaacactct 4876892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 45 - 176
Target Start/End: Original strand, 3071585 - 3071717
Alignment:
Q  45 ggcgccgccttaatagtctctagaaacttctagaaaccgccc-taaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccata 143  Q
    |||||||||| |||| ||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||    
T  3071585 ggcgccgcctcaataatctctagaatcttctagaaaccgcccctaaatacataaatacccctattacttggagactaagcaaccgaaacccaagcccata 3071684  T
Q  144 gaagactataaataccacccttgagaacactct 176  Q
    |||| ||||||||||||||||||||||||||||    
T  3071685 gaaggctataaataccacccttgagaacactct 3071717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 62 - 176
Target Start/End: Complemental strand, 29603917 - 29603803
Alignment:
Q  62 ctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccac 161  Q
    |||||||| |||||||||||||||| |||||| ||||||||| |||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||    
T  29603917 ctctagaaccttctagaaaccgcccaaaatacctaaatacccctattacttggagactaagcaaccaaaacccatgcccatagaaggctataaataccac 29603818  T
Q  162 ccttgagaacactct 176  Q
    |||||||||||||||    
T  29603817 ccttgagaacactct 29603803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 44 - 176
Target Start/End: Original strand, 23692708 - 23692841
Alignment:
Q  44 tggcgccgccttaatagtctctagaaacttctagaaaccgccc-taaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccat 142  Q
    ||||||||||| || | ||||||||| |||||||||||||||| ||||||| |||| |||| |||||||||||||| |||||||| ||||||||||||||    
T  23692708 tggcgccgcctcaacaatctctagaatcttctagaaaccgcccctaaatacctaaaaacccctattacttggagactaagcaaccgaaacccaagcccat 23692807  T
Q  143 agaagactataaataccacccttgagaacactct 176  Q
    ||||| ||||||||||||||||||||||||||||    
T  23692808 agaaggctataaataccacccttgagaacactct 23692841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 44 - 176
Target Start/End: Original strand, 23696495 - 23696628
Alignment:
Q  44 tggcgccgccttaatagtctctagaaacttctagaaaccgccc-taaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccat 142  Q
    ||||||||||| || | ||||||||| |||||||||||||||| ||||||| |||| |||| |||||||||||||| |||||||| ||||||||||||||    
T  23696495 tggcgccgcctcaacaatctctagaatcttctagaaaccgcccctaaatacctaaaaacccctattacttggagactaagcaaccgaaacccaagcccat 23696594  T
Q  143 agaagactataaataccacccttgagaacactct 176  Q
    ||||| ||||||||||||||||||||||||||||    
T  23696595 agaaggctataaataccacccttgagaacactct 23696628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 62 - 176
Target Start/End: Complemental strand, 7311021 - 7310907
Alignment:
Q  62 ctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccac 161  Q
    |||||||| |||||||||||||||| |||  | ||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  7311021 ctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaacccaagcccatagaaggctataaataccac 7310922  T
Q  162 ccttgagaacactct 176  Q
    |||||||||||||||    
T  7310921 ccttgagaacactct 7310907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 62 - 176
Target Start/End: Original strand, 45278935 - 45279049
Alignment:
Q  62 ctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccac 161  Q
    |||||||| |||||||||||||||| |||  | ||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  45278935 ctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaacccaagcccatagaaggctataaataccac 45279034  T
Q  162 ccttgagaacactct 176  Q
    |||||||||||||||    
T  45279035 ccttgagaacactct 45279049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 62 - 176
Target Start/End: Original strand, 45286234 - 45286348
Alignment:
Q  62 ctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccac 161  Q
    |||||||| |||||||||||||||| |||  | ||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  45286234 ctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaacccaagcccatagaaggctataaataccac 45286333  T
Q  162 ccttgagaacactct 176  Q
    |||||||||||||||    
T  45286334 ccttgagaacactct 45286348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 71 - 185
Target Start/End: Original strand, 5771860 - 5771974
Alignment:
Q  71 cttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccacccttgagaa 170  Q
    |||||||||||||||| |||  | ||||||||| |||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||     
T  5771860 cttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccgaaacccaagcccatagaaggctataaataccacccttgagag 5771959  T
Q  171 cactctaaaatatcc 185  Q
    |||||| || |||||    
T  5771960 cactctcaagtatcc 5771974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 62 - 176
Target Start/End: Complemental strand, 26126220 - 26126106
Alignment:
Q  62 ctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccac 161  Q
    |||||||| |||||||||||||||| |||  | ||||||||| |||||||||||||| |||||||| |||| |||||||||||||| |||||||||||||    
T  26126220 ctctagaatcttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccgaaactcaagcccatagaaggctataaataccac 26126121  T
Q  162 ccttgagaacactct 176  Q
    |||||||| ||||||    
T  26126120 ccttgagagcactct 26126106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 169
Target Start/End: Original strand, 26383947 - 26384045
Alignment:
Q  71 cttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccacccttgaga 169  Q
    |||| ||||||||||  |||||| ||||||| | | || |||||   |||||||||| |||||||||||||||| ||||||||||||| || |||||||    
T  26383947 cttccagaaaccgcctaaaatacgtaaatacgcctgttgcttgggagccaagcaaccgaaacccaagcccatagcagactataaatactactcttgaga 26384045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 127
Target Start/End: Complemental strand, 26120758 - 26120693
Alignment:
Q  62 ctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaacc 127  Q
    |||||||| |||||||||||||||| |||  | ||||||||| |||||||||||||| ||||||||    
T  26120758 ctctagaatcttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaacc 26120693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 71 - 158
Target Start/End: Original strand, 26382128 - 26382215
Alignment:
Q  71 cttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaatac 158  Q
    ||||||||||||| |  |||||||||||||||| | || |||||   |||||||||| ||||||||| ||||||  | ||||||||||    
T  26382128 cttctagaaaccgtcgaaaatacataaatacccctgttgcttgggagccaagcaaccgaaacccaagtccatagccggctataaatac 26382215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 109; Significance: 5e-55; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 49 - 185
Target Start/End: Complemental strand, 8854264 - 8854128
Alignment:
Q  49 ccgccttaatagtctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaaga 148  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||     
T  8854264 ccgccttaataatctctagaatcttctagaaaccgccctaaatacataaatacccatattacttggagactaagcaaccaaaacccaagcccatagaagg 8854165  T
Q  149 ctataaataccacccttgagaacactctaaaatatcc 185  Q
    |||||||||||||||||||||||||||| || |||||    
T  8854164 ctataaataccacccttgagaacactctcaagtatcc 8854128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 29 - 176
Target Start/End: Complemental strand, 94713 - 94566
Alignment:
Q  29 ggcgcgctctatccgtggcgccgccttaatagtctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaacca 128  Q
    ||||||||||| || | |||||||| ||||  ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  94713 ggcgcgctctacccatagcgccgccataatgatctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaacca 94614  T
Q  129 aaacccaagcccatagaagactataaataccacccttgagaacactct 176  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||    
T  94613 aaacccaagcccatggaagactataaataccatccttgagaacactct 94566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 46 - 185
Target Start/End: Complemental strand, 8368407 - 8368267
Alignment:
Q  46 gcgccgccttaatagtctctagaaacttctagaaaccgccct-aaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatag 144  Q
    ||||||||| |||| ||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||| ||| |||| ||||||||||||||||    
T  8368407 gcgccgcctcaataatctctagaatcttctagaaaccgcccttaaatacataaatacccctattacttggagactaagtaaccgaaacccaagcccatag 8368308  T
Q  145 aagactataaataccacccttgagaacactctaaaatatcc 185  Q
    ||| |||||||||||||||||||||||||||| ||||||||    
T  8368307 aaggctataaataccacccttgagaacactctcaaatatcc 8368267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 61 - 176
Target Start/End: Original strand, 16091838 - 16091953
Alignment:
Q  61 tctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaatacca 160  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||||||||| || |||||||||| ||||||||||||||||| ||||||||||||    
T  16091838 tctctagaaacttctagaaaccgccctaaatacataaataaccctattacttggatactaagcaaccaagacccaagcccatagaaggctataaatacca 16091937  T
Q  161 cccttgagaacactct 176  Q
    ||||||||||||||||    
T  16091938 cccttgagaacactct 16091953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 44 - 185
Target Start/End: Original strand, 17601662 - 17601804
Alignment:
Q  44 tggcgccgccttaatagtctctagaaacttctagaaaccgccc-taaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccat 142  Q
    ||||||||||| |||| ||| ||||| |||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||| |||||||||| |||    
T  17601662 tggcgccgcctcaataatctgtagaatcttctagaaaccgcccctaaatacataaatacccctattacttggagactaagcaaccgaaacccaagcacat 17601761  T
Q  143 agaagactataaataccacccttgagaacactctaaaatatcc 185  Q
    ||||| |||||||||| ||||||||||||||||| ||||||||    
T  17601762 agaaggctataaatactacccttgagaacactctcaaatatcc 17601804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 61 - 176
Target Start/End: Original strand, 16082662 - 16082777
Alignment:
Q  61 tctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaatacca 160  Q
    ||||||||||||||||||||| |||||||||||||||||| || ||||||||||| || |||||||||| ||||||||||||||||| ||||||||||||    
T  16082662 tctctagaaacttctagaaactgccctaaatacataaataaccctattacttggaaactaagcaaccaagacccaagcccatagaaggctataaatacca 16082761  T
Q  161 cccttgagaacactct 176  Q
    ||||||||||||||||    
T  16082762 cccttgagaacactct 16082777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 73 - 176
Target Start/End: Complemental strand, 103531 - 103428
Alignment:
Q  73 tctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccacccttgagaaca 172  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||| |||||||||||| |||||||||||    
T  103531 tctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccaaaacccaagcccatggaaggctataaataccatccttgagaaca 103432  T
Q  173 ctct 176  Q
    ||||    
T  103431 ctct 103428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 44 - 185
Target Start/End: Original strand, 17593654 - 17593796
Alignment:
Q  44 tggcgccgccttaatagtctctagaaacttctagaaaccgcc-ctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccat 142  Q
    ||||||||||| |||| |||  |||| |||||||||||  || |||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||    
T  17593654 tggcgccgcctcaataatctgaagaatcttctagaaactacctctaaatacataaatacccctattacttggagactaagcaaccgaaacccaagcccat 17593753  T
Q  143 agaagactataaataccacccttgagaacactctaaaatatcc 185  Q
    ||||| ||||||||||||||||||| |||||||| | ||||||    
T  17593754 agaaggctataaataccacccttgacaacactctcagatatcc 17593796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 71 - 185
Target Start/End: Original strand, 18556648 - 18556762
Alignment:
Q  71 cttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccacccttgagaa 170  Q
    |||||||||||||||| |||  | ||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  18556648 cttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaacccaagcccatagaaggctataaataccacccttgagaa 18556747  T
Q  171 cactctaaaatatcc 185  Q
    |||||| || |||||    
T  18556748 cactctcaagtatcc 18556762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 55 - 176
Target Start/End: Complemental strand, 14561218 - 14561097
Alignment:
Q  55 taatagtctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataa 154  Q
    ||||| |||||| || ||||||||||||||| ||||||| ||||||||| |||||||||||||  |||||||||||||||||| ||||||||| ||||||    
T  14561218 taataatctctaaaatcttctagaaaccgccataaatacgtaaatacccctattacttggagaataagcaaccaaaacccaagtccatagaaggctataa 14561119  T
Q  155 ataccacccttgagaacactct 176  Q
    |||||||||| |||||||||||    
T  14561118 ataccaccctcgagaacactct 14561097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 44 - 176
Target Start/End: Original strand, 38700146 - 38700279
Alignment:
Q  44 tggcgccgccttaatagtctctagaaacttctagaaaccgccct-aaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccat 142  Q
    ||||||||||| ||||  ||||||||  |||||||||||||||| |||||| ||||||||| |||||||||||||| |||||||||||||||||||||||    
T  38700146 tggcgccgcctcaataacctctagaatgttctagaaaccgcccttaaatacgtaaatacccctattacttggagactaagcaaccaaaacccaagcccat 38700245  T
Q  143 agaagactataaataccacccttgagaacactct 176  Q
    |  || ||||||||||||||||| ||||||||||    
T  38700246 aagaggctataaataccacccttaagaacactct 38700279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 44 - 176
Target Start/End: Complemental strand, 10813162 - 10813028
Alignment:
Q  44 tggcgccgccttaatag-tctctagaaacttctagaaaccgcc-ctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagccca 141  Q
    ||||||||||| ||||  ||||||||| |||||||||| |||| |||||||||||||||||| ||||||||| |||| ||| ||||||||||||||||||    
T  10813162 tggcgccgcctcaataaatctctagaatcttctagaaatcgcctctaaatacataaatacccctattacttgaagactaagaaaccaaaacccaagccca 10813063  T
Q  142 tagaagactataaataccacccttgagaacactct 176  Q
    |||||| ||||||||||| |||||||||| |||||    
T  10813062 tagaaggctataaataccgcccttgagaatactct 10813028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 49 - 185
Target Start/End: Complemental strand, 8857102 - 8856975
Alignment:
Q  49 ccgccttaatagtctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaaga 148  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||             
T  8857102 ccgccttaataatctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccaaaactcaagcc--------- 8857012  T
Q  149 ctataaataccacccttgagaacactctaaaatatcc 185  Q
     ||||||||||||||||||||||||||| || |||||    
T  8857011 atataaataccacccttgagaacactctcaagtatcc 8856975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 73 - 177
Target Start/End: Complemental strand, 10776996 - 10776892
Alignment:
Q  73 tctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccacccttgagaaca 172  Q
    |||||||||| |||||||||||||||||||| |||||||||||| | ||||||||||  ||||||||||||||||  |||||||||||||||||||||||    
T  10776996 tctagaaaccaccctaaatacataaatacccctattacttggaggctaagcaaccaaggcccaagcccatagaaggttataaataccacccttgagaaca 10776897  T
Q  173 ctcta 177  Q
    |||||    
T  10776896 ctcta 10776892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 29 - 172
Target Start/End: Complemental strand, 14566428 - 14566285
Alignment:
Q  29 ggcgcgctctatccgtggcgccgccttaatagtctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaacca 128  Q
    ||||||||||| ||   || ||||| ||||  |||||| || ||||||||||||||| ||||||| ||||||||| |||||||||||||  ||| |||||    
T  14566428 ggcgcgctctacccacagcaccgccataatgatctctaaaatcttctagaaaccgccataaatacgtaaatacccctattacttggagaataagaaacca 14566329  T
Q  129 aaacccaagcccatagaagactataaataccacccttgagaaca 172  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||    
T  14566328 aaacccaagtccatagaaggctataaataccacccttgagaaca 14566285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 44 - 176
Target Start/End: Complemental strand, 10816058 - 10815929
Alignment:
Q  44 tggcgccgccttaatag-tctctagaaacttctagaaaccgcc-ctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagccca 141  Q
    ||||||||||| ||||  ||||||||| |||||||||| |||| |||||||||||||||||     ||||||||||| ||||||| |||||||||| |||    
T  10816058 tggcgccgcctcaataaatctctagaatcttctagaaatcgcctctaaatacataaatacc-----tacttggagactaagcaactaaaacccaagtcca 10815964  T
Q  142 tagaagactataaataccacccttgagaacactct 176  Q
    |||||| ||||||||||||||||||||||||||||    
T  10815963 tagaaggctataaataccacccttgagaacactct 10815929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 71 - 185
Target Start/End: Complemental strand, 26900724 - 26900610
Alignment:
Q  71 cttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccacccttgagaa 170  Q
    |||||||||||||||| |||  | ||||||||| ||||||||| |||| ||||||||||||| |||||||||||||  ||||||||||||||||||||||    
T  26900724 cttctagaaaccgcccaaaaggcctaaatacccctattacttgaagactaagcaaccaaaactcaagcccatagaaagctataaataccacccttgagaa 26900625  T
Q  171 cactctaaaatatcc 185  Q
    |||||| || |||||    
T  26900624 cactctcaagtatcc 26900610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 63 - 169
Target Start/End: Complemental strand, 15926858 - 15926752
Alignment:
Q  63 tctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccacc 162  Q
    ||||||||| |||||||||||||  ||||||  |||||||| | || ||||| ||||||||||||||||||||||||||||| || ||||||||||||||    
T  15926858 tctagaaacctctagaaaccgcctaaaatacgcaaatacccatgttgcttggggaccaagcaaccaaaacccaagcccatagcaggctataaataccacc 15926759  T
Q  163 cttgaga 169  Q
    |||||||    
T  15926758 cttgaga 15926752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 63 - 176
Target Start/End: Complemental strand, 14789859 - 14789744
Alignment:
Q  63 tctagaaacttctagaaaccgccct-aaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccat-agaagactataaatacca 160  Q
    ||||||| ||||||||||||||||| |||||| ||||||||| ||||||||| |    ||||||||||||||||||||||| ||||| ||||||||||||    
T  14789859 tctagaatcttctagaaaccgcccttaaatacgtaaatacccctattacttgaaagttaagcaaccaaaacccaagcccataagaaggctataaatacca 14789760  T
Q  161 cccttgagaacactct 176  Q
     | ||||||| |||||    
T  14789759 tcgttgagaagactct 14789744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 71 - 185
Target Start/End: Complemental strand, 26907328 - 26907219
Alignment:
Q  71 cttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccacccttgagaa 170  Q
    |||||||||||||||| |||  | ||||||||| ||||||||| ||||     |||||||||||||||||||||||  ||||||||||||| ||||||||    
T  26907328 cttctagaaaccgcccaaaaggcctaaatacccctattacttgaagac-----aaccaaaacccaagcccatagaaagctataaataccactcttgagaa 26907234  T
Q  171 cactctaaaatatcc 185  Q
    |||||| || |||||    
T  26907233 cactctcaagtatcc 26907219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 15417785 - 15417844
Alignment:
Q  126 ccaaaacccaagcccatagaagactataaataccacccttgagaacactctaaaatatcc 185  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||| || |||||    
T  15417785 ccaaaacccaagcccatagaaggttataaataccacccttgagaacactctcaagtatcc 15417844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 176
Target Start/End: Complemental strand, 19767811 - 19767698
Alignment:
Q  65 tagaaacttctagaaaccgccctaaa--tacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccacc 162  Q
    ||||| ||||||||||||||||  ||  ||||||||||||| ||||||||  |  | ||| |||  ||||||||||||||||||| |||||||||||| |    
T  19767811 tagaatcttctagaaaccgcccccaaagtacataaatacccctattacttaaacgctaagtaactgaaacccaagcccatagaaggctataaataccatc 19767712  T
Q  163 cttgagaacactct 176  Q
    |||||||| |||||    
T  19767711 cttgagaagactct 19767698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 179
Target Start/End: Original strand, 14429821 - 14429929
Alignment:
Q  71 cttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccacccttgagaa 170  Q
    |||||||||||||||| |||||| ||||||||| | || ||||||  ||||||||    | |||||||||| || || ||||||||||||| ||| |||     
T  14429821 cttctagaaaccgcccaaaatacctaaatacccctgttgcttggaagccaagcaatagtagcccaagcccacagcaggctataaataccactctttagat 14429920  T
Q  171 cactctaaa 179  Q
    || ||||||    
T  14429921 cattctaaa 14429929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 179
Target Start/End: Original strand, 14433306 - 14433414
Alignment:
Q  71 cttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccacccttgagaa 170  Q
    |||||| |||||| || |||||| ||||||||| | || ||||||  |||||||||   | |||||||||| || || ||||||||||||| ||| |||     
T  14433306 cttctaaaaaccgaccaaaatacctaaatacccctgttgcttggaagccaagcaacagtagcccaagcccacagcaggctataaataccactctttagat 14433405  T
Q  171 cactctaaa 179  Q
    || ||||||    
T  14433406 cattctaaa 14433414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 104; Significance: 5e-52; HSPs: 1)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 37 - 176
Target Start/End: Original strand, 4213 - 4352
Alignment:
Q  37 ctatccgtggcgccgccttaatagtctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaa 136  Q
    |||| ||||||||||||||| ||| |||||||| |||||||||| |||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  4213 ctatacgtggcgccgccttactagcctctagaatcttctagaaatcgccctaaatacataaatacccctattacttggagactaagcaaccaaaacccaa 4312  T
Q  137 gcccatagaagactataaataccacccttgagaacactct 176  Q
    ||||||||| | ||||||||||||||||||||||||||||    
T  4313 gcccatagagggctataaataccacccttgagaacactct 4352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 104; Significance: 5e-52; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 37 - 176
Target Start/End: Original strand, 7522 - 7661
Alignment:
Q  37 ctatccgtggcgccgccttaatagtctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaa 136  Q
    |||| ||||||||||||||| ||| |||||||| |||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  7522 ctatacgtggcgccgccttactagcctctagaatcttctagaaaccgcgctaaatacataaatacccctattacttggagactaagcaaccaaaacccaa 7621  T
Q  137 gcccatagaagactataaataccacccttgagaacactct 176  Q
    ||||||||| | ||||||||||||||||||||||||||||    
T  7622 gcccatagagggctataaataccacccttgagaacactct 7661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 103; Significance: 2e-51; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 46 - 176
Target Start/End: Complemental strand, 23532665 - 23532535
Alignment:
Q  46 gcgccgccttaatagtctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccataga 145  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||| |||||||| |||||||||||||||||    
T  23532665 gcgccgccttaataatctctagaatcttctagaaaccgccctaaatacataaataccactattacttggagactaagcaaccgaaacccaagcccataga 23532566  T
Q  146 agactataaataccacccttgagaacactct 176  Q
    || ||||||||||||||||||||||||||||    
T  23532565 aggctataaataccacccttgagaacactct 23532535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 61 - 185
Target Start/End: Complemental strand, 15932423 - 15932299
Alignment:
Q  61 tctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaatacca 160  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  15932423 tctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccaagacccaagcccataaaaggctataaatacca 15932324  T
Q  161 cccttgagaacactctaaaatatcc 185  Q
    |||||||||||||||| || |||||    
T  15932323 cccttgagaacactctcaagtatcc 15932299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 61 - 176
Target Start/End: Original strand, 11527319 - 11527434
Alignment:
Q  61 tctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaatacca 160  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||    
T  11527319 tctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccgaaacccaagcccatagaaggctataaatacca 11527418  T
Q  161 cccttgagaacactct 176  Q
    |||||| |||||||||    
T  11527419 cccttgggaacactct 11527434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 61 - 176
Target Start/End: Original strand, 11544724 - 11544839
Alignment:
Q  61 tctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaatacca 160  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||    
T  11544724 tctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccgaaacccaagcccatagaaggctataaatacca 11544823  T
Q  161 cccttgagaacactct 176  Q
    |||||| |||||||||    
T  11544824 cccttgggaacactct 11544839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 73 - 176
Target Start/End: Original strand, 44360128 - 44360231
Alignment:
Q  73 tctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccacccttgagaaca 172  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  44360128 tctagaaaccgccctaaatacataaatacccctattatttggagactaagcaaccaagacccaagcccatagaagactataaataccacccttgagaaca 44360227  T
Q  173 ctct 176  Q
    ||||    
T  44360228 ctct 44360231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 61 - 172
Target Start/End: Original strand, 44356996 - 44357107
Alignment:
Q  61 tctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaatacca 160  Q
    |||||||||| ||||| |||||||||||||||||||||||||| ||||| |||||||| |||||||||| ||||||||||||||||| ||||||||||||    
T  44356996 tctctagaaatttctataaaccgccctaaatacataaatacccctattatttggagactaagcaaccaagacccaagcccatagaaggctataaatacca 44357095  T
Q  161 cccttgagaaca 172  Q
    ||||||||||||    
T  44357096 cccttgagaaca 44357107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 45 - 176
Target Start/End: Original strand, 11100123 - 11100255
Alignment:
Q  45 ggcgccgccttaatagtctctagaaacttctagaaaccgccc-taaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccata 143  Q
    |||||||||| |||| ||||||||| |||||||||||||||| ||||||||||||||||| |||||||||| | | ||| |||  |||||||||||||||    
T  11100123 ggcgccgcctcaataatctctagaatcttctagaaaccgcccctaaatacataaatacccctattacttgggggctaagtaactgaaacccaagcccata 11100222  T
Q  144 gaagactataaataccacccttgagaacactct 176  Q
    |||| |||||||||||||||||| |||||||||    
T  11100223 gaaggctataaataccacccttgggaacactct 11100255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 50 - 158
Target Start/End: Complemental strand, 23522430 - 23522322
Alignment:
Q  50 cgccttaatagtctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagac 149  Q
    |||||||||| ||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||| |||||||| |||||||| |||||||||| |    
T  23522430 cgccttaataatctctagaatcttctagaaacctccctaaatacataaatacccctattacttggagactaagcaaccgaaacccaaacccatagaaggc 23522331  T
Q  150 tataaatac 158  Q
    |||||||||    
T  23522330 tataaatac 23522322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 88 - 176
Target Start/End: Complemental strand, 30218137 - 30218049
Alignment:
Q  88 aaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccacccttgagaacactct 176  Q
    ||||| |||||||||| ||||||||||   |||||||||| |||||||||| ||||| ||||||||||||||||||||| || ||||||    
T  30218137 aaatatataaatacccctattacttgggagccaagcaaccgaaacccaagctcatagcagactataaataccacccttgggagcactct 30218049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 38 - 169
Target Start/End: Complemental strand, 43173587 - 43173456
Alignment:
Q  38 tatccgtggcgccgccttaatagtctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaag 137  Q
    ||||| |||||||||||  ||| ||||||||| ||| ||||| |||||  ||||||| |||||| | |||| |||   |||||||||||| |||||||||    
T  43173587 tatccatggcgccgcctcgataatctctagaatcttatagaatccgcctaaaatacacaaatactcctattgcttaaggaccaagcaaccgaaacccaag 43173488  T
Q  138 cccatagaagactataaataccacccttgaga 169  Q
    | ||||  || |||||||||||||||||||||    
T  43173487 ctcataacaggctataaataccacccttgaga 43173456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 76 - 169
Target Start/End: Original strand, 9066367 - 9066460
Alignment:
Q  76 agaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccacccttgaga 169  Q
    ||||||||||  |||||||||||||||||| || |||||   |||||||||| |||||||||||||||| || |||||||||| || |||||||    
T  9066367 agaaaccgcctaaaatacataaataccctttttgcttgggagccaagcaaccgaaacccaagcccatagcaggctataaatactactcttgaga 9066460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 66 - 158
Target Start/End: Original strand, 18016850 - 18016942
Alignment:
Q  66 agaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaatac 158  Q
    |||| ||| |||||||||||  |||||||||||||||||| || |||||   ||||||||||||||||||||||||||| || ||||| ||||    
T  18016850 agaagcttatagaaaccgcctaaaatacataaatacccttgttgcttgggagccaagcaaccaaaacccaagcccatagcaggctatatatac 18016942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 71 - 158
Target Start/End: Original strand, 9070320 - 9070407
Alignment:
Q  71 cttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaatac 158  Q
    |||| |||||| |||  ||||||||||||||||||||| |||||   |||||||||  |||||||||||||||| || ||||||||||    
T  9070320 cttccagaaactgcctaaaatacataaatacccttattgcttgggagccaagcaactgaaacccaagcccatagcaggctataaatac 9070407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 71 - 169
Target Start/End: Complemental strand, 9214715 - 9214617
Alignment:
Q  71 cttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccacccttgaga 169  Q
    |||||||||||| ||| || ||| ||||||||| | || |||||| |||||||||| | | |||||||||| || |  ||||||||||||| |||||||    
T  9214715 cttctagaaaccacccaaagtacctaaatacccatgttgcttggaaaccaagcaacaagagcccaagcccacagcatgctataaataccactcttgaga 9214617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 71 - 158
Target Start/End: Original strand, 6201929 - 6202016
Alignment:
Q  71 cttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaatac 158  Q
    |||||||||||||||  |||||| |||||| || ||||  |||||  |||||||||   ||||||||||||||| || ||||||||||    
T  6201929 cttctagaaaccgcctaaaatacctaaatatccctattggttggaagccaagcaacagtaacccaagcccatagcaggctataaatac 6202016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 158
Target Start/End: Complemental strand, 21776037 - 21775957
Alignment:
Q  78 aaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaatac 158  Q
    ||||| ||| |||||||||||||||| | || ||||||  ||||||||| ||||| |||| ||||||  | ||||||||||    
T  21776037 aaaccacccaaaatacataaatacccctcttgcttggaagccaagcaacaaaaactcaagtccatagcgggctataaatac 21775957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1778 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold1778
Description:

Target: scaffold1778; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 53 - 185
Target Start/End: Complemental strand, 1115 - 983
Alignment:
Q  53 cttaatagtctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactat 152  Q
    ||||||| ||||||| | ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||    
T  1115 cttaataatctctaggatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccaaaacccaagcccatagaaggctat 1016  T
Q  153 aaataccacccttgagaacactctaaaatatcc 185  Q
    |||||||||||||||||||||||| || |||||    
T  1015 aaataccacccttgagaacactctcaagtatcc 983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 101; Significance: 3e-50; HSPs: 2)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 29 - 185
Target Start/End: Original strand, 27455 - 27611
Alignment:
Q  29 ggcgcgctctatccgtggcgccgccttaatagtctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaacca 128  Q
    |||||||  |||||||||| | ||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| || ||| ||||     
T  27455 ggcgcgcattatccgtggcactgccttaataatctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggaaactaagtaaccg 27554  T
Q  129 aaacccaagcccatagaagactataaataccacccttgagaacactctaaaatatcc 185  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||    
T  27555 aaacccaagcccatagaaggctataaataccatccttgagaacactctcaaatatcc 27611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179; HSP #2
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 73 - 185
Target Start/End: Original strand, 24840 - 24952
Alignment:
Q  73 tctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccacccttgagaaca 172  Q
    ||||||||||||| ||||||||||||||||| ||||||||||| || ||| |||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  24840 tctagaaaccgccttaaatacataaatacccctattacttggaaactaagtaaccgaaacccaagcccatagaaggctataaataccacccttgagaaca 24939  T
Q  173 ctctaaaatatcc 185  Q
    |||| || |||||    
T  24940 ctctcaagtatcc 24952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 37 - 176
Target Start/End: Original strand, 194565 - 194704
Alignment:
Q  37 ctatccgtggcgccgccttaatagtctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaa 136  Q
    |||| ||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  194565 ctatacgtggcgccgccttactagcctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccaaaacccaa 194664  T
Q  137 gcccatagaagactataaataccacccttgagaacactct 176  Q
    |||||||||   |||||||||||||| |||||||||||||    
T  194665 gcccatagagagctataaataccaccattgagaacactct 194704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 100; Significance: 1e-49; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 29 - 176
Target Start/End: Complemental strand, 20090643 - 20090496
Alignment:
Q  29 ggcgcgctctatccgtggcgccgccttaatagtctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaacca 128  Q
    |||||||  ||||| ||||||||||| | || ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||     
T  20090643 ggcgcgcattatccatggcgccgcctcactaatctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccg 20090544  T
Q  129 aaacccaagcccatagaagactataaataccacccttgagaacactct 176  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||    
T  20090543 aaacccaagcccataggaggctataaataccacccttgagaacactct 20090496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 61 - 176
Target Start/End: Complemental strand, 19573801 - 19573686
Alignment:
Q  61 tctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaatacca 160  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||    
T  19573801 tctctagaaacttctataaaccgccctaaatacataaatacccctattacttggagactaagcaaccaagacccaagcccatagaaggctataaatacca 19573702  T
Q  161 cccttgagaacactct 176  Q
    ||||||||||||||||    
T  19573701 cccttgagaacactct 19573686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 61 - 176
Target Start/End: Original strand, 11231301 - 11231416
Alignment:
Q  61 tctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaatacca 160  Q
    ||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  11231301 tctctagaaacttctagaagccgccctaaatacataaataccgctattacttggagactaagcaaccaagacccaagcccatagaagactataaatacca 11231400  T
Q  161 cccttgagaacactct 176  Q
    |||||||||| |||||    
T  11231401 cccttgagaagactct 11231416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 46 - 176
Target Start/End: Complemental strand, 23607170 - 23607040
Alignment:
Q  46 gcgccgccttaatagtctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccataga 145  Q
    ||||||||||| ||  ||||||||  ||||||||||||||| ||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  23607170 gcgccgccttactaacctctagaactttctagaaaccgcccaaaatacacaaatacccctattacttggagactaagcaaccaaaacccaagcccataga 23607071  T
Q  146 agactataaataccacccttgagaacactct 176  Q
    || ||||||||||| ||||||||||||||||    
T  23607070 aggctataaatacctcccttgagaacactct 23607040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 62 - 176
Target Start/End: Original strand, 16688550 - 16688664
Alignment:
Q  62 ctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccac 161  Q
    ||||| || ||||||||||||||||||||||| ||||||||| |||||||||||||  |||||||||||| ||||||||||||||| |||||||||||||    
T  16688550 ctctaaaaccttctagaaaccgccctaaatacctaaatacccctattacttggagattaagcaaccaaaatccaagcccatagaaggctataaataccac 16688649  T
Q  162 ccttgagaacactct 176  Q
    |||||||||||||||    
T  16688650 ccttgagaacactct 16688664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 62 - 176
Target Start/End: Complemental strand, 19019429 - 19019315
Alignment:
Q  62 ctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccac 161  Q
    |||||||| |||||||||||||||| |||  | ||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  19019429 ctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaacccaagcccatagaaggctataaataccac 19019330  T
Q  162 ccttgagaacactct 176  Q
    |||||||||||||||    
T  19019329 ccttgagaacactct 19019315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 62 - 185
Target Start/End: Original strand, 8668073 - 8668196
Alignment:
Q  62 ctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccac 161  Q
    |||||||| |||||||||||| ||| |||  | ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  8668073 ctctagaaccttctagaaaccacccaaaaggcctaaatacccctattacttggagactaagcaaccaaaacccaagcccatagaagactataaataccac 8668172  T
Q  162 ccttgagaacactctaaaatatcc 185  Q
    ||||||||||| ||| || |||||    
T  8668173 ccttgagaacattctcaagtatcc 8668196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 46 - 176
Target Start/End: Complemental strand, 19008665 - 19008535
Alignment:
Q  46 gcgccgccttaatagtctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccataga 145  Q
    ||||||||||| ||  |||||||| |||||||||||| ||| |||||| ||||||||| |||||||||||| | |||||||||| |||||||||||||||    
T  19008665 gcgccgccttactaacctctagaaccttctagaaacctcccgaaatacgtaaatacccctattacttggaggctaagcaaccaagacccaagcccataga 19008566  T
Q  146 agactataaataccacccttgagaacactct 176  Q
    || |||||||||||||| |||||||||||||    
T  19008565 aggctataaataccacctttgagaacactct 19008535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 45 - 176
Target Start/End: Complemental strand, 17997002 - 17996870
Alignment:
Q  45 ggcgccgccttaatagtctctagaaacttctagaaaccgccc-taaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccata 143  Q
    |||||||||| |||| ||||||||| |||||||||||||||| ||||||||||||||||| |||||||||| | | ||| |||  |||||||||||||||    
T  17997002 ggcgccgcctcaataatctctagaatcttctagaaaccgcccctaaatacataaatacccctattacttgggggctaagtaactgaaacccaagcccata 17996903  T
Q  144 gaagactataaataccacccttgagaacactct 176  Q
    |||| |||||||||||||||||| |||||||||    
T  17996902 gaaggctataaataccacccttgggaacactct 17996870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 46 - 176
Target Start/End: Complemental strand, 18929565 - 18929435
Alignment:
Q  46 gcgccgccttaatagtctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccataga 145  Q
    ||||||||||| ||  |||||||| |||||||||||| ||| |||||| ||||||||| ||||| |||||| | |||||||||| |||||||||||||||    
T  18929565 gcgccgccttactaacctctagaaccttctagaaaccacccgaaatacgtaaatacccctattatttggaggctaagcaaccaagacccaagcccataga 18929466  T
Q  146 agactataaataccacccttgagaacactct 176  Q
    || |||||||||||||| |||||||||||||    
T  18929465 aggctataaataccacctttgagaacactct 18929435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 62 - 176
Target Start/End: Complemental strand, 19011798 - 19011684
Alignment:
Q  62 ctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccac 161  Q
    |||||||| |||||||||||  ||| |||||| ||||||||| ||||||||||| || ||| |||||||||||||||||||||||| |||||||||||||    
T  19011798 ctctagaaccttctagaaactacccaaaatacctaaatacccctattacttggacactaagaaaccaaaacccaagcccatagaaggctataaataccac 19011699  T
Q  162 ccttgagaacactct 176  Q
    |||||||||||||||    
T  19011698 ccttgagaacactct 19011684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 61 - 176
Target Start/End: Complemental strand, 19577419 - 19577308
Alignment:
Q  61 tctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaatacca 160  Q
    |||||||||||||||||||||||||||| |||    ||||||| |||||||||||||| |||||||||| ||||||| ||||||||| ||||||||||||    
T  19577419 tctctagaaacttctagaaaccgccctatata----aatacccctattacttggagactaagcaaccaagacccaagtccatagaaggctataaatacca 19577324  T
Q  161 cccttgagaacactct 176  Q
    ||||||||||||||||    
T  19577323 cccttgagaacactct 19577308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 62 - 176
Target Start/End: Original strand, 22467530 - 22467644
Alignment:
Q  62 ctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccac 161  Q
    |||||||| ||| |||||||| ||| |||||| ||||||||| |||||||| ||||| |||||||| ||||||||||||||||||| |||||||||||||    
T  22467530 ctctagaaccttatagaaaccccccaaaatacctaaatacccctattactttgagactaagcaaccgaaacccaagcccatagaaggctataaataccac 22467629  T
Q  162 ccttgagaacactct 176  Q
    |||||||||||||||    
T  22467630 ccttgagaacactct 22467644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 62 - 169
Target Start/End: Original strand, 16666272 - 16666379
Alignment:
Q  62 ctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccac 161  Q
    |||||||| |||||||||||||||||| |||| ||||||||| || ||||||||||  |||||||||||||||||||||||||||| |||||||||||||    
T  16666272 ctctagaaccttctagaaaccgccctatatacctaaatacccctactacttggagattaagcaaccaaaacccaagcccatagaaggctataaataccac 16666371  T
Q  162 ccttgaga 169  Q
    || |||||    
T  16666372 ccatgaga 16666379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 62 - 176
Target Start/End: Original strand, 8650043 - 8650157
Alignment:
Q  62 ctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccac 161  Q
    |||||||| |||||||||||||||| |||  | ||||||||| ||||| |||||||| ||||||||||||| ||||| |||||||| |||||||||||||    
T  8650043 ctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattatttggagactaagcaaccaaaactcaagctcatagaaggctataaataccac 8650142  T
Q  162 ccttgagaacactct 176  Q
    |||||||||||||||    
T  8650143 ccttgagaacactct 8650157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 45 - 155
Target Start/End: Complemental strand, 13727827 - 13727716
Alignment:
Q  45 ggcgccgccttaatagtctctagaaacttctagaaaccgccc-taaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccata 143  Q
    |||||||||| |||| ||||||||| |||||||||||||||| ||||||||||||||||| |||||||| ||||| |||||||| ||||||||| |||||    
T  13727827 ggcgccgcctcaataatctctagaatcttctagaaaccgcccctaaatacataaatacccctattacttagagactaagcaaccgaaacccaagtccata 13727728  T
Q  144 gaagactataaa 155  Q
    |||| |||||||    
T  13727727 gaaggctataaa 13727716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 62 - 169
Target Start/End: Original strand, 25970119 - 25970227
Alignment:
Q  62 ctctagaaacttctagaaaccgccc-taaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaatacca 160  Q
    |||||||| |||||||||||||||| |||||||||||| |||| |||||||||||||  |||||||| ||||||||||||||||||| |||||||||| |    
T  25970119 ctctagaatcttctagaaaccgcccctaaatacataaacacccctattacttggagattaagcaaccgaaacccaagcccatagaaggctataaatacta 25970218  T
Q  161 cccttgaga 169  Q
    | |||||||    
T  25970219 ctcttgaga 25970227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 62 - 169
Target Start/End: Original strand, 25974559 - 25974667
Alignment:
Q  62 ctctagaaacttctagaaaccgccc-taaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaatacca 160  Q
    |||||||| |||||||||||||||| |||||||||||| |||| |||||||||||||  |||||||| ||||||||||||||||||| |||||||||| |    
T  25974559 ctctagaatcttctagaaaccgcccctaaatacataaacacccctattacttggagattaagcaaccgaaacccaagcccatagaaggctataaatacta 25974658  T
Q  161 cccttgaga 169  Q
    | |||||||    
T  25974659 ctcttgaga 25974667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 169
Target Start/End: Original strand, 11091875 - 11091981
Alignment:
Q  63 tctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccacc 162  Q
    ||||||||  |||||||  | |||||||||| |||||||||||||||||||  | | ||| ||||| ||  || ||||||||| | |||||||||| | |    
T  11091875 tctagaaatctctagaatacaccctaaatacctaaatacccttattacttgctgtctaagtaaccataattcaggcccatagagggctataaatacaaac 11091974  T
Q  163 cttgaga 169  Q
    |||||||    
T  11091975 cttgaga 11091981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 97; Significance: 7e-48; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 29 - 185
Target Start/End: Original strand, 8460127 - 8460283
Alignment:
Q  29 ggcgcgctctatccgtggcgccgccttaatagtctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaacca 128  Q
    ||||||||||| || | |||||||| ||||  ||| ||||| |||||||||||| |||||||||||||||||||| |||||||||||||| ||| |||||    
T  8460127 ggcgcgctctacccatagcgccgccataatgatctttagaatcttctagaaaccaccctaaatacataaatacccctattacttggagactaagaaacca 8460226  T
Q  129 aaacccaagcccatagaagactataaataccacccttgagaacactctaaaatatcc 185  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||    
T  8460227 aaacccaagcccatagaaggctataaataccacccttgagaacactctcagatatcc 8460283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 49 - 185
Target Start/End: Complemental strand, 26857589 - 26857453
Alignment:
Q  49 ccgccttaatagtctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaaga 148  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||| ||||| ||| |||||||||||||  ||||||||||||||||||||||||||||     
T  26857589 ccgccttaataatctctagaatcttctagaaaccgccctaaatacctaaatccccctattacttggagattaagcaaccaaaacccaagcccatagaagg 26857490  T
Q  149 ctataaataccacccttgagaacactctaaaatatcc 185  Q
    |||||||||||||||||||| ||||||| || |||||    
T  26857489 ctataaataccacccttgaggacactctcaagtatcc 26857453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 29 - 185
Target Start/End: Original strand, 40933164 - 40933322
Alignment:
Q  29 ggcgcgctctatccgtggcgccgccttaatag-tctctagaaacttctagaaaccgccc-taaatacataaatacccttattacttggagaccaagcaac 126  Q
    |||||||  |||||| |||||||||| ||||  |||||||||||||||| ||| ||||  ||||||||||||||||| |||||||||||| | |||||||    
T  40933164 ggcgcgcattatccgcggcgccgcctcaataaatctctagaaacttctaaaaatcgcctataaatacataaatacccctattacttggaggctaagcaac 40933263  T
Q  127 caaaacccaagcccatagaagactataaataccacccttgagaacactctaaaatatcc 185  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||    
T  40933264 caaaacccaagcccatagaaggctataaataccacccttgagaacactcttaagtatcc 40933322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 65 - 176
Target Start/End: Complemental strand, 26863816 - 26863705
Alignment:
Q  65 tagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccaccct 164  Q
    ||||| ||||||||||||||||||||||| ||||||||| |||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||    
T  26863816 tagaatcttctagaaaccgccctaaatacctaaatacccctattacttggagattaagcaaccaaaacccaagcccatagaaggctataaataccaccct 26863717  T
Q  165 tgagaacactct 176  Q
    |||| |||||||    
T  26863716 tgaggacactct 26863705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 29 - 185
Target Start/End: Original strand, 40936559 - 40936717
Alignment:
Q  29 ggcgcgctctatccgtggcgccgccttaatag-tctctagaaacttctagaaaccgccc-taaatacataaatacccttattacttggagaccaagcaac 126  Q
    |||||||  |||||| |||||||||| ||||  ||||||||| |||||||||| ||||  ||||||||||||||||| |||||||||||| | |||||||    
T  40936559 ggcgcgcattatccgcggcgccgcctcaataaatctctagaatcttctagaaatcgcctataaatacataaatacccctattacttggaggctaagcaac 40936658  T
Q  127 caaaacccaagcccatagaagactataaataccacccttgagaacactctaaaatatcc 185  Q
     |||||||||||||||||||| |||||||||||||||||||||||| ||| || |||||    
T  40936659 aaaaacccaagcccatagaaggctataaataccacccttgagaacagtctcaagtatcc 40936717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 29 - 130
Target Start/End: Original strand, 32965734 - 32965835
Alignment:
Q  29 ggcgcgctctatccgtggcgccgccttaatagtctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaacca 128  Q
    |||||||  |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||    
T  32965734 ggcgcgcattatccgtggcgccgccttaataatctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaatca 32965833  T
Q  129 aa 130  Q
    ||    
T  32965834 aa 32965835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 62 - 176
Target Start/End: Original strand, 38840668 - 38840782
Alignment:
Q  62 ctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccac 161  Q
    |||||||| |||||||| | ||||| |||||| |||||| ||||||||||||||||| |||||| ||||||||||| ||||||| | ||||||||| |||    
T  38840668 ctctagaaccttctagagatcgcccaaaatacctaaatatccttattacttggagactaagcaatcaaaacccaagtccatagagggctataaatatcac 38840767  T
Q  162 ccttgagaacactct 176  Q
    |||||||||||||||    
T  38840768 ccttgagaacactct 38840782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 62 - 176
Target Start/End: Original strand, 38836749 - 38836863
Alignment:
Q  62 ctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccac 161  Q
    |||||||| |||||||| | ||||| |||||| ||||||||| |||||||||||||| ||||||  |||||||||||||||||| | ||||||||| |||    
T  38836749 ctctagaaccttctagagatcgcccaaaatacctaaatacccctattacttggagactaagcaataaaaacccaagcccatagagggctataaatatcac 38836848  T
Q  162 ccttgagaacactct 176  Q
    |||||||| ||||||    
T  38836849 ccttgagagcactct 38836863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 63 - 169
Target Start/End: Original strand, 27073681 - 27073787
Alignment:
Q  63 tctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccacc 162  Q
    ||||||||| |||  ||||||||  ||||||| |||||||| | || ||||| || ||||||||| ||||| ||| |||||| |||||||||||||||||    
T  27073681 tctagaaacctctgaaaaccgcctaaaatacacaaatacccctgttgcttggggatcaagcaaccgaaacctaagtccatagcagactataaataccacc 27073780  T
Q  163 cttgaga 169  Q
    |||||||    
T  27073781 cttgaga 27073787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 169
Target Start/End: Complemental strand, 20680291 - 20680193
Alignment:
Q  71 cttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccacccttgaga 169  Q
    |||| ||||||||||  |||||||||||||||| |  | |||||   |||||||||| |||||||||||||||| || |||||||||| || |||||||    
T  20680291 cttccagaaaccgcctaaaatacataaatacccctgctgcttgggagccaagcaaccgaaacccaagcccatagcaggctataaatactactcttgaga 20680193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 169
Target Start/End: Complemental strand, 19049830 - 19049727
Alignment:
Q  66 agaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccaccctt 165  Q
    |||| ||||| ||| |||||  ||||||| |||| ||  |||| ||||| |||||||||||| |||||||||||||||  |  ||||||||||||| |||    
T  19049830 agaaccttctggaacccgcctaaaatacacaaatgcctctattgcttggggaccaagcaaccgaaacccaagcccataacatgctataaataccactctt 19049731  T
Q  166 gaga 169  Q
    ||||    
T  19049730 gaga 19049727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 158
Target Start/End: Complemental strand, 20675208 - 20675116
Alignment:
Q  66 agaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaatac 158  Q
    |||| ||||||||||||||   |||||||||||||||| |  | |||||   |||||||||| |||||||||||||||  || ||||||||||    
T  20675208 agaagcttctagaaaccgcgtaaaatacataaatacccctgctgcttgggagccaagcaaccgaaacccaagcccatatcaggctataaatac 20675116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 169
Target Start/End: Complemental strand, 20675543 - 20675445
Alignment:
Q  71 cttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccacccttgaga 169  Q
    ||||||||||||||   |||||||||||||||| |  | |||||   |||||||||| ||||||||||||| |  || |||||||||| || |||||||    
T  20675543 cttctagaaaccgcgtaaaatacataaatacccatgctgcttgggagccaagcaaccgaaacccaagcccagaacaggctataaatactactcttgaga 20675445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 3e-47; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 29 - 176
Target Start/End: Complemental strand, 12020397 - 12020250
Alignment:
Q  29 ggcgcgctctatccgtggcgccgccttaatagtctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaacca 128  Q
    ||||||||||| || | |||| ||| ||||  |||||||||  |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||     
T  12020397 ggcgcgctctacccatagcgctgccataatgatctctagaatattctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccg 12020298  T
Q  129 aaacccaagcccatagaagactataaataccacccttgagaacactct 176  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12020297 aaacccaagcccatagaaggctataaataccacccttgagaacactct 12020250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 46 - 176
Target Start/End: Original strand, 19749495 - 19749625
Alignment:
Q  46 gcgccgccttaatagtctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccataga 145  Q
    |||||||| || || ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||    
T  19749495 gcgccgccatactaatctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccaagacccaagcccataga 19749594  T
Q  146 agactataaataccacccttgagaacactct 176  Q
    || |||||||||||||| |||||||||||||    
T  19749595 aggctataaataccacctttgagaacactct 19749625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 29 - 176
Target Start/End: Complemental strand, 24277001 - 24276854
Alignment:
Q  29 ggcgcgctctatccgtggcgccgccttaatagtctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaacca 128  Q
    ||||||||||| || | |||||||| ||||  ||||| ||| |||||| ||||||||||||| |||||||||||| |||||||||||||| |||||||||    
T  24277001 ggcgcgctctacccatagcgccgccataatgatctctcgaatcttctaaaaaccgccctaaaaacataaatacccctattacttggagactaagcaacca 24276902  T
Q  129 aaacccaagcccatagaagactataaataccacccttgagaacactct 176  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||    
T  24276901 aaacccaaacccatagaaggctataaataccacccttgagaacactct 24276854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 46 - 176
Target Start/End: Original strand, 19751721 - 19751851
Alignment:
Q  46 gcgccgccttaatagtctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccataga 145  Q
    |||||||| || || ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||| |||||||||||||||    
T  19751721 gcgccgccatactaatctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagaaaccaagacccaagcccataga 19751820  T
Q  146 agactataaataccacccttgagaacactct 176  Q
    || |||||||||||||| |||||||||||||    
T  19751821 aggctataaataccacctttgagaacactct 19751851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 32 - 174
Target Start/End: Complemental strand, 24281111 - 24280969
Alignment:
Q  32 gcgctctatccgtggcgccgccttaatagtctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaa 131  Q
    |||||||| || | |||||||| ||||  ||||||||| ||||| ||||| |||||||| |||||||||||| |||||||||||||| ||||||||||||    
T  24281111 gcgctctacccatagcgccgccataatgatctctagaatcttctggaaactgccctaaaaacataaatacccctattacttggagactaagcaaccaaaa 24281012  T
Q  132 cccaagcccatagaagactataaataccacccttgagaacact 174  Q
    |||||||||||||||| ||||||||| ||||||||||||||||    
T  24281011 cccaagcccatagaaggctataaatatcacccttgagaacact 24280969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 62 - 185
Target Start/End: Complemental strand, 15142789 - 15142666
Alignment:
Q  62 ctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccac 161  Q
    |||||||| ||||||||||||| || |||  | |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  15142789 ctctagaaccttctagaaaccgtccaaaaggcctaaatacccttattacttggagactaagcaaccaaaacccaagcccatagaaggctataaataccac 15142690  T
Q  162 ccttgagaacactctaaaatatcc 185  Q
    ||||||||||||||| || |||||    
T  15142689 ccttgagaacactcttaagtatcc 15142666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 61 - 176
Target Start/End: Original strand, 20442500 - 20442615
Alignment:
Q  61 tctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaatacca 160  Q
    ||||||||||||||||||| ||||||||||||| ||||| ||| ||||||||||| || ||||||||||||||||||| |||||||| ||||||||||||    
T  20442500 tctctagaaacttctagaagccgccctaaatacttaaatgcccctattacttggaaactaagcaaccaaaacccaagctcatagaaggctataaatacca 20442599  T
Q  161 cccttgagaacactct 176  Q
    ||||||||||||||||    
T  20442600 cccttgagaacactct 20442615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 38 - 176
Target Start/End: Original strand, 18433159 - 18433296
Alignment:
Q  38 tatccgtggcgccgccttaatagtctctagaaacttctagaaaccgccc-taaatacataaatacccttattacttggagaccaagcaaccaaaacccaa 136  Q
    ||||| || |||||||| |||| ||||||||| |||||||||||||||| |||||||||||||| || |||||||||||||| ||||||||  |||||||    
T  18433159 tatccatgacgccgcctcaataatctctagaatcttctagaaaccgcccctaaatacataaataaccctattacttggagactaagcaaccggaacccaa 18433258  T
Q  137 gcccatagaagactataaataccacccttgagaacactct 176  Q
    ||||||||||||||||||||||||||  ||||||||||||    
T  18433259 gcccatagaagactataaataccacc--tgagaacactct 18433296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 61 - 176
Target Start/End: Original strand, 20514361 - 20514476
Alignment:
Q  61 tctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaatacca 160  Q
    ||||||||||||||||||| ||||||||||||| ||||| ||| ||||||||||| |  ||||||||||||||||||| |||||||| ||||||||||||    
T  20514361 tctctagaaacttctagaagccgccctaaatacttaaatgcccctattacttggaaagtaagcaaccaaaacccaagctcatagaaggctataaatacca 20514460  T
Q  161 cccttgagaacactct 176  Q
    ||||||||||||||||    
T  20514461 cccttgagaacactct 20514476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 62 - 185
Target Start/End: Complemental strand, 15158215 - 15158092
Alignment:
Q  62 ctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccac 161  Q
    |||||||| |||||||||||||||  |||  | ||||| ||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  15158215 ctctagaaccttctagaaaccgccgaaaaggcctaaattcccctattacttggagactaagcaaccaaaacccaagcccatagaaggctataaataccac 15158116  T
Q  162 ccttgagaacactctaaaatatcc 185  Q
    ||||||||||||||| || |||||    
T  15158115 ccttgagaacactctcaagtatcc 15158092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 62 - 169
Target Start/End: Complemental strand, 20435370 - 20435263
Alignment:
Q  62 ctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccac 161  Q
    |||||||| ||||||||||| ||| ||||||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  20435370 ctctagaatcttctagaaacagccataaatacctaaatacctttattacttggagactaagcaactaaaacccaagcccatagaaggctataaataccac 20435271  T
Q  162 ccttgaga 169  Q
    | ||||||    
T  20435270 cattgaga 20435263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 61 - 176
Target Start/End: Complemental strand, 36910611 - 36910500
Alignment:
Q  61 tctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaatacca 160  Q
    ||||||||| ||||||||||||||| ||    || |||||||| |||||||||| ||| ||||||||||||| ||||||||   ||| ||||||||||||    
T  36910611 tctctagaatcttctagaaaccgcctta----cacaaatacccctattacttggggactaagcaaccaaaactcaagcccacgaaaggctataaatacca 36910516  T
Q  161 cccttgagaacactct 176  Q
    || |||||||||||||    
T  36910515 cctttgagaacactct 36910500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 63 - 172
Target Start/End: Original strand, 20194842 - 20194951
Alignment:
Q  63 tctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccacc 162  Q
    ||||||||| ||| |||||||||  ||||| | |||||||| |  | ||||| || ||||||||| |||| ||||||||||| || |||||||||||| |    
T  20194842 tctagaaacctctggaaaccgcctaaaatatacaaatacccctgctgcttggggaacaagcaaccgaaactcaagcccatagcaggctataaataccagc 20194941  T
Q  163 cttgagaaca 172  Q
    ||||||||||    
T  20194942 cttgagaaca 20194951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 169
Target Start/End: Complemental strand, 30306570 - 30306538
Alignment:
Q  137 gcccatagaagactataaataccacccttgaga 169  Q
    |||||||||||||||||||||| ||||||||||    
T  30306570 gcccatagaagactataaatacaacccttgaga 30306538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 38 - 176
Target Start/End: Complemental strand, 13168 - 13030
Alignment:
Q  38 tatccgtggcgccgccttaatagtctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaag 137  Q
    ||||| ||||||||||| | || |||||| || ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||    
T  13168 tatccatggcgccgcctcactaatctctaaaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccgaaacccaag 13069  T
Q  138 cccatagaagactataaataccacccttgagaacactct 176  Q
    ||||||| || ||||||||||||||||||||||||||||    
T  13068 cccataggaggctataaataccacccttgagaacactct 13030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 92; Significance: 7e-45; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 29 - 176
Target Start/End: Complemental strand, 1683 - 1536
Alignment:
Q  29 ggcgcgctctatccgtggcgccgccttaatagtctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaacca 128  Q
    ||||||||||| || | |||||| | ||||  ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||     
T  1683 ggcgcgctctacccatagcgccgtcataatgatctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccg 1584  T
Q  129 aaacccaagcccatagaagactataaataccacccttgagaacactct 176  Q
    |||| |||||||||||||| ||||||||||||||||| ||||||||||    
T  1583 aaactcaagcccatagaaggctataaataccacccttaagaacactct 1536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 47 - 176
Target Start/End: Original strand, 78657 - 78786
Alignment:
Q  47 cgccgccttaatagtctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaa 146  Q
    ||||||| || || ||||||||||||||||||| ||||||||||||| |||||  || |||||||||||||| |||||||||||||||||||||||||||    
T  78657 cgccgccatattaatctctagaaacttctagaagccgccctaaatacttaaatgtccctattacttggagactaagcaaccaaaacccaagcccatagaa 78756  T
Q  147 gactataaataccacccttgagaacactct 176  Q
    | ||||||||||||||||||||||||||||    
T  78757 ggctataaataccacccttgagaacactct 78786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 89; Significance: 4e-43; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 38 - 173
Target Start/End: Complemental strand, 20702 - 20566
Alignment:
Q  38 tatccgtggcgccgccttaatagtctctagaaacttctagaaaccgccc-taaatacataaatacccttattacttggagaccaagcaaccaaaacccaa 136  Q
    ||||| ||||||||||| |||| ||||||||| |||||||| ||||||| ||||||||||||||||  |||||||||||||| |||||||| ||||||||    
T  20702 tatccatggcgccgcctcaataatctctagaatcttctagagaccgcccctaaatacataaataccgctattacttggagactaagcaaccgaaacccaa 20603  T
Q  137 gcccatagaagactataaataccacccttgagaacac 173  Q
    ||||||||||| |||||||||||||||||||||||||    
T  20602 gcccatagaaggctataaataccacccttgagaacac 20566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 185
Target Start/End: Original strand, 12001 - 12141
Alignment:
Q  45 ggcgccgccttaatagtctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatag 144  Q
    |||| ||||| |||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||| ||||||||||||    
T  12001 ggcgtcgcctcaataatctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccgaaatccaagcccatag 12100  T
Q  145 aagactataaataccacccttgagaacactctaaaatatcc 185  Q
    ||| |||||||||||| ||||||  ||||||| | ||||||    
T  12101 aaggctataaataccatccttgaacacactctcagatatcc 12141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 61 - 176
Target Start/End: Original strand, 149877 - 149993
Alignment:
Q  61 tctctagaaacttctagaaacc-gccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaatacc 159  Q
    ||||||||||||||||||| || ||||||||||| ||||| ||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  149877 tctctagaaacttctagaagcccgccctaaatacttaaatgcccctattacttggagactaagcaaccaaaacccaagcccatagaaggctataaatacc 149976  T
Q  160 acccttgagaacactct 176  Q
    |||||||||||||||||    
T  149977 acccttgagaacactct 149993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 61 - 176
Target Start/End: Original strand, 146670 - 146786
Alignment:
Q  61 tctctagaaacttctagaaacc-gccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaatacc 159  Q
    ||||||||||||||||||| || ||||||||||| ||||| ||| ||||||||| |||| ||||||||||||||||||| |||||||| |||||||||||    
T  146670 tctctagaaacttctagaagcccgccctaaatacttaaatgcccctattacttgaagactaagcaaccaaaacccaagctcatagaaggctataaatacc 146769  T
Q  160 acccttgagaacactct 176  Q
    |||||||||||||||||    
T  146770 acccttgagaacactct 146786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 62 - 184
Target Start/End: Complemental strand, 13996 - 13874
Alignment:
Q  62 ctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccac 161  Q
    |||||||| |||||||| | ||||| |||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||    
T  13996 ctctagaaccttctagagatcgcccaaaatacctaaatacccttattacttggatactaagcaaccaaaacccaagcccatagaaggctataaataccac 13897  T
Q  162 ccttgagaacactctaaaatatc 184  Q
    |||||||| |||||| |||||||    
T  13896 ccttgagagcactctcaaatatc 13874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 62 - 184
Target Start/End: Complemental strand, 10509 - 10387
Alignment:
Q  62 ctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccac 161  Q
    |||||||| |||||||| | ||||  |||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||    
T  10509 ctctagaaccttctagagatcgcctaaaatacctaaatacccttattacttggatactaagcaaccaaaacccaagcccatagaaggctataaataccac 10410  T
Q  162 ccttgagaacactctaaaatatc 184  Q
    |||| ||| |||||| |||||||    
T  10409 ccttaagagcactctcaaatatc 10387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 62 - 176
Target Start/End: Original strand, 56484 - 56598
Alignment:
Q  62 ctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccac 161  Q
    |||||||| |||||||||||||||| |||||| ||||||||| |||||||||||||| |||||||||||| |||||| |||||||| |||||||||||||    
T  56484 ctctagaaccttctagaaaccgcccaaaatacctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccac 56583  T
Q  162 ccttgagaacactct 176  Q
    |||||||||||||||    
T  56584 ccttgagaacactct 56598  T

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Target: scaffold1505 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold1505
Description:

Target: scaffold1505; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 62 - 176
Target Start/End: Complemental strand, 559 - 445
Alignment:
Q  62 ctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccac 161  Q
    |||||||| |||||||||||||||| |||  | ||||||||| |||||||||||||| |||||||| || ||||||||||||||||||||||||||||||    
T  559 ctctagaatcttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccgaagcccaagcccatagaagactataaataccac 460  T
Q  162 ccttgagaacactct 176  Q
    |||||||||||||||    
T  459 ccttgagaacactct 445  T

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Target: scaffold0139 (Bit Score: 77; Significance: 6e-36; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 45 - 176
Target Start/End: Complemental strand, 3057 - 2925
Alignment:
Q  45 ggcgccgccttaatagtctctagaaacttctagaaaccgccctaaa-tacataaatacccttattacttggagaccaagcaaccaaaacccaagcccata 143  Q
    |||||||||| |||| ||||||||| |||||||||||||||| ||| ||||||||||||| |||||||||||||| |||||||| ||| |||||||||||    
T  3057 ggcgccgcctcaataatctctagaatcttctagaaaccgccccaaaatacataaatacccctattacttggagactaagcaaccgaaatccaagcccata 2958  T
Q  144 gaagactataaataccacccttgagaacactct 176  Q
     ||| ||||||||||| |||||||||| |||||    
T  2957 caaggctataaatacctcccttgagaagactct 2925  T

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Target: scaffold0130 (Bit Score: 76; Significance: 2e-35; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 62 - 185
Target Start/End: Complemental strand, 15118 - 14995
Alignment:
Q  62 ctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccac 161  Q
    |||||||| |||||||| | || || |||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||||    
T  15118 ctctagaaccttctagagatcgtccaaaatacctaaatacccttattacttggtgactaagcaaccaaaacccaagcccatagaaggctataaataccac 15019  T
Q  162 ccttgagaacactctaaaatatcc 185  Q
    |||||||| |||||| || |||||    
T  15018 ccttgagagcactctcaagtatcc 14995  T

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Target: scaffold0130; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 62 - 158
Target Start/End: Complemental strand, 19117 - 19021
Alignment:
Q  62 ctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaatac 158  Q
    |||||||| |||||||| | || || |||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||    
T  19117 ctctagaaccttctagagatcgtccaaaatacctaaatacccttattacttggagactaagcaaccaaaacccaagctcatagaaggctataaatac 19021  T

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Target: scaffold0167 (Bit Score: 70; Significance: 9e-32; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 56 - 185
Target Start/End: Complemental strand, 10598 - 10469
Alignment:
Q  56 aatagtctctagaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaa 155  Q
    |||| ||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| ||| |||| |||||||||| | |||||    
T  10598 aataatctctagaatcttctagaaaccgccctaaatgcataaatacccctattacttggagactaagcaaccgaaatccaatcccatagaaggccataaa 10499  T
Q  156 taccacccttgagaacactctaaaatatcc 185  Q
    ||||| ||||||  ||||||| | ||||||    
T  10498 taccatccttgaacacactctcagatatcc 10469  T

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Target: scaffold0123 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 75 - 169
Target Start/End: Complemental strand, 8871 - 8776
Alignment:
Q  75 tagaaaccgccc-taaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccacccttgaga 169  Q
    |||||||||||| |||||||||||| |||| |||||||||||||  |||||||| ||||||||||||||||||| |||||||||| || |||||||    
T  8871 tagaaaccgcccctaaatacataaacacccctattacttggagattaagcaaccgaaacccaagcccatagaaggctataaatactactcttgaga 8776  T

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Target: scaffold0071 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 44453 - 44394
Alignment:
Q  126 ccaaaacccaagcccatagaagactataaataccacccttgagaacactctaaaatatcc 185  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||| || |||||    
T  44453 ccaaaacccaagcccatagaaggttataaataccacccttgagaacactctcaagtatcc 44394  T

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Target: scaffold0716 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 88 - 158
Target Start/End: Original strand, 2145 - 2215
Alignment:
Q  88 aaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaatac 158  Q
    |||||||||||||||| | || |||||   |||||||||| |||||||||||||||| || ||||||||||    
T  2145 aaatacataaatacccctgttgcttgggagccaagcaaccgaaacccaagcccatagcaggctataaatac 2215  T

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Target: scaffold0013 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 66 - 161
Target Start/End: Complemental strand, 147545 - 147450
Alignment:
Q  66 agaaacttctagaaaccgccctaaatacataaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccac 161  Q
    ||||||||||||||||||||  ||||||  ||||| || | || ||||||| | ||||||    ||||||||||||||| || |||||||||||||    
T  147545 agaaacttctagaaaccgcctaaaatactaaaatatccatgttgcttggaggcgaagcaatagtaacccaagcccatagcaggctataaataccac 147450  T

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Target: scaffold0438 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0438
Description:

Target: scaffold0438; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 169
Target Start/End: Complemental strand, 3998 - 3924
Alignment:
Q  95 taaatacccttattacttggagaccaagcaaccaaaacccaagcccatagaagactataaataccacccttgaga 169  Q
    |||||| || |||| ||||||  |||||||||| |||||||||||||||  || |||||||||| || |||||||    
T  3998 taaatatccctattgcttggaagccaagcaaccgaaacccaagcccataacaggctataaatactacacttgaga 3924  T

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