View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11347_high_1 (Length: 920)

Name: NF11347_high_1
Description: NF11347
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11347_high_1
NF11347_high_1
[»] chr8 (75 HSPs)
chr8 (301-903)||(43998179-43998780)
chr8 (304-540)||(17955130-17955366)
chr8 (301-541)||(42513843-42514083)
chr8 (301-510)||(24885238-24885445)
chr8 (301-540)||(21641123-21641361)
chr8 (171-305)||(54609-54743)
chr8 (171-304)||(2890160-2890293)
chr8 (171-303)||(7785777-7785909)
chr8 (172-302)||(6552655-6552785)
chr8 (170-303)||(43199353-43199486)
chr8 (171-303)||(7805698-7805830)
chr8 (169-304)||(25600998-25601133)
chr8 (172-303)||(39571202-39571333)
chr8 (172-303)||(44498186-44498317)
chr8 (172-302)||(3304278-3304408)
chr8 (171-303)||(12763653-12763785)
chr8 (171-303)||(32211362-32211494)
chr8 (172-303)||(32114474-32114605)
chr8 (171-302)||(33289261-33289392)
chr8 (172-296)||(12343146-12343270)
chr8 (172-303)||(15888351-15888482)
chr8 (172-302)||(31654613-31654743)
chr8 (389-510)||(32016119-32016240)
chr8 (172-303)||(7012171-7012302)
chr8 (389-541)||(32010945-32011096)
chr8 (389-541)||(2165389-2165542)
chr8 (170-303)||(13578855-13578988)
chr8 (175-306)||(28463614-28463745)
chr8 (172-303)||(8587170-8587301)
chr8 (170-308)||(27422191-27422326)
chr8 (171-234)||(4245649-4245712)
chr8 (171-295)||(24691986-24692109)
chr8 (171-306)||(33057593-33057728)
chr8 (177-287)||(17006916-17007026)
chr8 (177-287)||(17570221-17570331)
chr8 (32-74)||(43998880-43998922)
chr8 (248-302)||(8587170-8587224)
chr8 (168-226)||(25600996-25601054)
chr8 (120-173)||(43998779-43998833)
chr8 (301-350)||(21641687-21641736)
chr8 (301-350)||(21642062-21642111)
chr8 (301-350)||(21642437-21642486)
chr8 (301-350)||(21642812-21642861)
chr8 (301-350)||(21643187-21643236)
chr8 (248-297)||(28463616-28463665)
chr8 (171-308)||(43199353-43199490)
chr8 (171-226)||(27422266-27422321)
chr8 (170-308)||(54610-54748)
chr8 (169-303)||(2890159-2890293)
chr8 (256-302)||(31654613-31654659)
chr8 (246-299)||(17006914-17006967)
chr8 (246-299)||(17570280-17570333)
chr8 (171-303)||(7785777-7785909)
chr8 (246-294)||(15688038-15688086)
chr8 (249-301)||(30171483-30171535)
chr8 (256-303)||(4245665-4245712)
chr8 (256-303)||(7805783-7805830)
chr8 (235-286)||(35564706-35564757)
chr8 (171-218)||(39571202-39571249)
chr8 (256-302)||(3304362-3304408)
chr8 (256-302)||(6552655-6552701)
chr8 (172-218)||(6552739-6552785)
chr8 (171-205)||(6899418-6899452)
chr8 (256-302)||(12343224-12343270)
chr8 (179-229)||(13246801-13246851)
chr8 (256-302)||(15888436-15888482)
chr8 (256-302)||(32114559-32114605)
chr8 (247-309)||(33057587-33057649)
chr8 (172-218)||(33289261-33289307)
chr8 (256-302)||(44498271-44498317)
chr8 (210-295)||(13246801-13246886)
chr8 (246-303)||(24692052-24692109)
chr8 (171-216)||(32211362-32211407)
chr8 (258-303)||(32211449-32211494)
chr8 (314-395)||(42157316-42157397)
[»] chr7 (61 HSPs)
chr7 (301-541)||(21080316-21080556)
chr7 (301-540)||(2233948-2234187)
chr7 (307-540)||(32211961-32212194)
chr7 (301-541)||(17496012-17496252)
chr7 (301-541)||(17556962-17557202)
chr7 (301-541)||(12934996-12935236)
chr7 (301-540)||(19308872-19309111)
chr7 (301-541)||(43893454-43893694)
chr7 (301-510)||(16538699-16538908)
chr7 (301-510)||(16626754-16626963)
chr7 (332-540)||(42572543-42572751)
chr7 (318-541)||(47176491-47176713)
chr7 (171-309)||(7240748-7240886)
chr7 (165-303)||(38063912-38064050)
chr7 (171-303)||(1738446-1738578)
chr7 (170-309)||(7482223-7482362)
chr7 (171-302)||(46840859-46840990)
chr7 (171-304)||(9268755-9268888)
chr7 (171-306)||(1565725-1565860)
chr7 (389-541)||(33238421-33238573)
chr7 (172-302)||(23314139-23314269)
chr7 (172-302)||(31319399-31319529)
chr7 (171-302)||(22285698-22285829)
chr7 (389-541)||(33243598-33243750)
chr7 (172-303)||(36583395-36583526)
chr7 (171-308)||(28536745-28536882)
chr7 (172-308)||(94312-94448)
chr7 (172-302)||(38441460-38441590)
chr7 (389-541)||(47994219-47994370)
chr7 (172-302)||(36016196-36016326)
chr7 (171-303)||(4790247-4790379)
chr7 (389-541)||(47999394-47999545)
chr7 (188-296)||(33418392-33418500)
chr7 (178-295)||(40840126-40840243)
chr7 (171-302)||(9575408-9575539)
chr7 (172-295)||(7269412-7269535)
chr7 (457-541)||(47544744-47544828)
chr7 (167-304)||(7661071-7661208)
chr7 (168-304)||(7661074-7661210)
chr7 (33-72)||(21080642-21080681)
chr7 (256-310)||(7482217-7482271)
chr7 (179-302)||(7269412-7269535)
chr7 (256-303)||(22285698-22285745)
chr7 (168-218)||(9268840-9268890)
chr7 (256-302)||(36016280-36016326)
chr7 (171-303)||(1738446-1738578)
chr7 (171-303)||(7240748-7240880)
chr7 (256-304)||(38063997-38064045)
chr7 (256-303)||(1565813-1565860)
chr7 (171-226)||(7482301-7482356)
chr7 (182-268)||(14706705-14706792)
chr7 (256-303)||(28536835-28536882)
chr7 (244-295)||(29993251-29993302)
chr7 (172-303)||(46840859-46840990)
chr7 (172-226)||(22285775-22285829)
chr7 (172-218)||(23314139-23314185)
chr7 (256-302)||(23314223-23314269)
chr7 (256-302)||(31319483-31319529)
chr7 (256-302)||(36583395-36583441)
chr7 (172-218)||(38441544-38441590)
chr7 (247-301)||(46877665-46877719)
[»] chr1 (73 HSPs)
chr1 (301-540)||(3585213-3585452)
chr1 (320-540)||(5730702-5730922)
chr1 (301-510)||(48245998-48246207)
chr1 (384-541)||(5725360-5725517)
chr1 (168-309)||(9981643-9981784)
chr1 (171-302)||(27159358-27159489)
chr1 (171-302)||(44668093-44668224)
chr1 (172-302)||(31842795-31842925)
chr1 (172-302)||(39401966-39402096)
chr1 (172-305)||(47216696-47216829)
chr1 (171-303)||(14984836-14984968)
chr1 (171-302)||(11795932-11796063)
chr1 (171-302)||(26471065-26471196)
chr1 (389-541)||(27711689-27711841)
chr1 (170-303)||(34042694-34042827)
chr1 (172-303)||(1050888-1051019)
chr1 (172-302)||(47777481-47777611)
chr1 (171-303)||(12483627-12483759)
chr1 (389-541)||(37403994-37404147)
chr1 (390-541)||(37409113-37409265)
chr1 (389-510)||(34317840-34317961)
chr1 (389-510)||(36684270-36684391)
chr1 (172-296)||(44955212-44955336)
chr1 (171-304)||(25694318-25694451)
chr1 (171-303)||(47588336-47588468)
chr1 (172-279)||(23278024-23278131)
chr1 (389-539)||(11250701-11250852)
chr1 (389-541)||(27716809-27716963)
chr1 (169-303)||(17556749-17556884)
chr1 (178-310)||(47969700-47969833)
chr1 (171-303)||(11897053-11897185)
chr1 (170-302)||(16448108-16448240)
chr1 (172-305)||(37552141-37552274)
chr1 (169-292)||(12213484-12213607)
chr1 (187-302)||(11989796-11989911)
chr1 (246-305)||(16448182-16448241)
chr1 (451-510)||(50959010-50959069)
chr1 (171-308)||(11897048-11897185)
chr1 (171-303)||(12483627-12483759)
chr1 (170-302)||(37552141-37552273)
chr1 (183-288)||(12047117-12047223)
chr1 (32-72)||(5730569-5730609)
chr1 (184-295)||(12043616-12043726)
chr1 (221-295)||(1598389-1598461)
chr1 (169-218)||(25694403-25694452)
chr1 (170-211)||(39720776-39720817)
chr1 (256-304)||(9981645-9981693)
chr1 (185-261)||(12069499-12069575)
chr1 (178-218)||(44955212-44955252)
chr1 (256-303)||(11795932-11795979)
chr1 (171-218)||(14984921-14984968)
chr1 (171-218)||(17556837-17556884)
chr1 (256-303)||(26471149-26471196)
chr1 (256-303)||(27159442-27159489)
chr1 (258-309)||(34042689-34042740)
chr1 (256-303)||(44668177-44668224)
chr1 (170-205)||(47678371-47678406)
chr1 (221-287)||(571556-571622)
chr1 (256-302)||(1050888-1050934)
chr1 (172-218)||(11796017-11796063)
chr1 (172-218)||(27159358-27159404)
chr1 (172-218)||(31842795-31842841)
chr1 (256-302)||(31842879-31842925)
chr1 (172-218)||(39401966-39402012)
chr1 (256-302)||(39402050-39402096)
chr1 (172-218)||(44668093-44668139)
chr1 (256-302)||(47216783-47216829)
chr1 (172-218)||(47777481-47777527)
chr1 (177-226)||(9981723-9981772)
chr1 (195-264)||(11774536-11774605)
chr1 (255-304)||(17556750-17556799)
chr1 (246-303)||(21537943-21538000)
chr1 (258-307)||(23278087-23278136)
[»] chr6 (57 HSPs)
chr6 (301-541)||(2817396-2817636)
chr6 (301-541)||(34142693-34142933)
chr6 (301-541)||(34155309-34155549)
chr6 (301-540)||(34376376-34376615)
chr6 (301-540)||(6727773-6728012)
chr6 (301-541)||(24190649-24190890)
chr6 (170-304)||(11572143-11572277)
chr6 (169-302)||(2830332-2830465)
chr6 (172-304)||(6330115-6330247)
chr6 (171-302)||(8382969-8383100)
chr6 (172-303)||(26602323-26602454)
chr6 (171-305)||(13853590-13853724)
chr6 (170-303)||(8099528-8099661)
chr6 (389-541)||(22702943-22703095)
chr6 (389-540)||(22697768-22697919)
chr6 (171-303)||(33052793-33052925)
chr6 (172-303)||(9644696-9644827)
chr6 (172-303)||(9650713-9650844)
chr6 (389-541)||(21402107-21402259)
chr6 (170-305)||(35030998-35031133)
chr6 (389-540)||(29490808-29490959)
chr6 (171-304)||(6068565-6068698)
chr6 (171-302)||(6143553-6143684)
chr6 (171-302)||(8417793-8417924)
chr6 (188-304)||(28747132-28747248)
chr6 (384-540)||(31983470-31983626)
chr6 (172-264)||(13043758-13043850)
chr6 (202-302)||(17992018-17992118)
chr6 (172-304)||(22896471-22896594)
chr6 (301-390)||(31982091-31982180)
chr6 (180-268)||(6068974-6069062)
chr6 (170-302)||(7596977-7597109)
chr6 (171-304)||(3788035-3788169)
chr6 (177-304)||(14936455-14936582)
chr6 (171-307)||(8099525-8099661)
chr6 (168-305)||(11572141-11572278)
chr6 (191-287)||(6549902-6549997)
chr6 (246-302)||(8186441-8186497)
chr6 (169-228)||(3788111-3788170)
chr6 (169-218)||(6330199-6330248)
chr6 (172-304)||(2830333-2830465)
chr6 (170-310)||(13853591-13853731)
chr6 (248-308)||(31849574-31849634)
chr6 (256-303)||(8383053-8383100)
chr6 (171-218)||(9644780-9644827)
chr6 (171-218)||(9650797-9650844)
chr6 (248-299)||(14936533-14936584)
chr6 (171-218)||(26602407-26602454)
chr6 (256-303)||(33052878-33052925)
chr6 (256-302)||(6330115-6330161)
chr6 (223-281)||(8026117-8026175)
chr6 (172-218)||(8382969-8383015)
chr6 (256-302)||(26602323-26602369)
chr6 (170-216)||(35030999-35031045)
chr6 (169-218)||(6068650-6068699)
chr6 (261-302)||(22896471-22896512)
chr6 (256-305)||(35031085-35031134)
[»] chr3 (85 HSPs)
chr3 (301-540)||(30341200-30341439)
chr3 (301-510)||(34128437-34128646)
chr3 (301-541)||(17358478-17358717)
chr3 (301-541)||(3481644-3481884)
chr3 (301-541)||(30338095-30338335)
chr3 (301-540)||(3476188-3476427)
chr3 (301-540)||(4116946-4117185)
chr3 (301-540)||(54271231-54271463)
chr3 (168-305)||(49823378-49823515)
chr3 (167-302)||(19557052-19557187)
chr3 (171-303)||(40690995-40691127)
chr3 (172-303)||(10297979-10298110)
chr3 (171-304)||(22721930-22722063)
chr3 (171-306)||(8437424-8437559)
chr3 (171-302)||(34080030-34080161)
chr3 (172-310)||(37508921-37509059)
chr3 (172-302)||(48340397-48340527)
chr3 (171-303)||(4238593-4238725)
chr3 (171-303)||(8817385-8817517)
chr3 (172-304)||(51406673-51406805)
chr3 (171-302)||(2787832-2787963)
chr3 (172-303)||(17653712-17653843)
chr3 (171-302)||(21295326-21295457)
chr3 (171-302)||(38964391-38964522)
chr3 (171-302)||(44785396-44785527)
chr3 (170-305)||(46208028-46208163)
chr3 (389-540)||(17369085-17369236)
chr3 (171-304)||(9111492-9111625)
chr3 (171-299)||(42507358-42507486)
chr3 (389-541)||(20090186-20090338)
chr3 (389-541)||(20095311-20095463)
chr3 (389-541)||(15767716-15767867)
chr3 (389-540)||(15762556-15762706)
chr3 (171-302)||(42170346-42170477)
chr3 (170-303)||(36095679-36095812)
chr3 (389-510)||(55129156-55129276)
chr3 (177-302)||(6013336-6013461)
chr3 (172-302)||(35513473-35513603)
chr3 (179-309)||(33942925-33943055)
chr3 (171-302)||(9213515-9213646)
chr3 (169-302)||(34988072-34988205)
chr3 (171-303)||(26019479-26019610)
chr3 (246-304)||(34988073-34988131)
chr3 (246-302)||(2131746-2131802)
chr3 (171-302)||(5323205-5323337)
chr3 (247-303)||(9027141-9027197)
chr3 (32-72)||(17358300-17358340)
chr3 (32-72)||(34128761-34128801)
chr3 (170-302)||(37508921-37509053)
chr3 (172-303)||(9213515-9213646)
chr3 (171-302)||(17653712-17653843)
chr3 (170-305)||(46208027-46208162)
chr3 (171-308)||(4238588-4238725)
chr3 (179-268)||(8092595-8092684)
chr3 (32-72)||(30341563-30341603)
chr3 (353-388)||(17358415-17358450)
chr3 (168-227)||(33128202-33128261)
chr3 (172-218)||(21295326-21295372)
chr3 (187-272)||(29285790-29285873)
chr3 (170-304)||(49823379-49823513)
chr3 (184-257)||(43323072-43323145)
chr3 (172-272)||(2131702-2131802)
chr3 (211-255)||(8951943-8951987)
chr3 (256-304)||(19557136-19557184)
chr3 (256-304)||(36095764-36095812)
chr3 (243-303)||(45652068-45652128)
chr3 (168-216)||(51406759-51406807)
chr3 (171-218)||(10298063-10298110)
chr3 (248-303)||(21295402-21295457)
chr3 (256-303)||(22721930-22721977)
chr3 (256-303)||(34080114-34080161)
chr3 (171-218)||(40690995-40691042)
chr3 (256-303)||(44785480-44785527)
chr3 (172-218)||(6013336-6013382)
chr3 (256-302)||(10297979-10298025)
chr3 (172-218)||(19557052-19557098)
chr3 (172-218)||(34080030-34080076)
chr3 (256-302)||(35513473-35513519)
chr3 (256-310)||(38964384-38964438)
chr3 (172-218)||(38964476-38964522)
chr3 (172-218)||(48340481-48340527)
chr3 (177-218)||(9111499-9111540)
chr3 (169-226)||(22722007-22722064)
chr3 (177-218)||(42507360-42507401)
chr3 (32-72)||(54271108-54271149)
[»] chr4 (87 HSPs)
chr4 (301-541)||(53798241-53798481)
chr4 (301-541)||(41393772-41394010)
chr4 (301-541)||(13711282-13711522)
chr4 (301-541)||(9763268-9763508)
chr4 (301-540)||(51018702-51018940)
chr4 (301-509)||(47045647-47045854)
chr4 (307-541)||(4206960-4207193)
chr4 (353-541)||(13695721-13695909)
chr4 (171-302)||(47833610-47833741)
chr4 (171-308)||(48336262-48336399)
chr4 (172-304)||(53337370-53337502)
chr4 (171-302)||(3372120-3372251)
chr4 (389-541)||(8984982-8985134)
chr4 (389-541)||(13700876-13701028)
chr4 (389-541)||(21304530-21304682)
chr4 (172-302)||(6121893-6122023)
chr4 (172-302)||(20538686-20538816)
chr4 (171-304)||(3992975-3993108)
chr4 (169-302)||(7579307-7579440)
chr4 (172-305)||(24704370-24704503)
chr4 (170-310)||(47838609-47838749)
chr4 (389-541)||(8979862-8980014)
chr4 (389-541)||(21299410-21299562)
chr4 (171-302)||(42797731-42797862)
chr4 (389-541)||(54991842-54991994)
chr4 (170-304)||(3904681-3904815)
chr4 (172-302)||(46797725-46797855)
chr4 (171-302)||(51894582-51894713)
chr4 (170-303)||(33621794-33621927)
chr4 (172-305)||(52756675-52756808)
chr4 (171-307)||(43900548-43900684)
chr4 (389-541)||(36354561-36354711)
chr4 (389-541)||(39999488-39999639)
chr4 (389-541)||(54343622-54343773)
chr4 (389-541)||(54348776-54348927)
chr4 (389-540)||(54990388-54990539)
chr4 (389-540)||(40004446-40004596)
chr4 (171-303)||(41469765-41469897)
chr4 (172-303)||(5986876-5987007)
chr4 (389-541)||(36359747-36359897)
chr4 (168-301)||(40913190-40913323)
chr4 (184-303)||(3422073-3422191)
chr4 (168-279)||(33551197-33551308)
chr4 (168-279)||(26231573-26231684)
chr4 (184-302)||(41615676-41615794)
chr4 (169-271)||(25855080-25855182)
chr4 (178-303)||(17344219-17344344)
chr4 (170-302)||(29845643-29845769)
chr4 (187-289)||(50430431-50430533)
chr4 (235-302)||(4780358-4780425)
chr4 (172-300)||(44900080-44900208)
chr4 (248-303)||(17236864-17236919)
chr4 (172-303)||(43900548-43900679)
chr4 (172-226)||(4780371-4780425)
chr4 (231-297)||(45478151-45478217)
chr4 (187-268)||(31013036-31013117)
chr4 (186-272)||(9876653-9876739)
chr4 (178-244)||(17236845-17236912)
chr4 (172-218)||(42797816-42797862)
chr4 (172-309)||(47833604-47833741)
chr4 (246-302)||(1716301-1716357)
chr4 (169-305)||(3904680-3904816)
chr4 (307-351)||(4206071-4206115)
chr4 (170-226)||(24704446-24704502)
chr4 (248-304)||(25855081-25855137)
chr4 (256-304)||(33551199-33551247)
chr4 (256-304)||(40913273-40913321)
chr4 (246-302)||(44900080-44900136)
chr4 (256-303)||(3372120-3372167)
chr4 (171-218)||(3422144-3422191)
chr4 (168-303)||(3992975-3993110)
chr4 (183-262)||(6924724-6924802)
chr4 (257-304)||(26231575-26231622)
chr4 (171-218)||(41469765-41469812)
chr4 (171-310)||(47838616-47838755)
chr4 (256-303)||(48336262-48336309)
chr4 (178-228)||(5986950-5987000)
chr4 (172-218)||(6121893-6121939)
chr4 (256-302)||(20538770-20538816)
chr4 (256-302)||(24704370-24704416)
chr4 (187-293)||(43095230-43095336)
chr4 (172-218)||(46797809-46797855)
chr4 (172-218)||(51894582-51894628)
chr4 (256-302)||(53337370-53337416)
chr4 (177-218)||(40913194-40913235)
chr4 (178-271)||(41594660-41594753)
chr4 (169-218)||(53337454-53337503)
[»] scaffold0594 (1 HSPs)
scaffold0594 (316-540)||(8530-8754)
[»] chr2 (63 HSPs)
chr2 (337-540)||(4162891-4163094)
chr2 (353-538)||(28751019-28751204)
chr2 (170-303)||(3055556-3055689)
chr2 (171-304)||(44398685-44398818)
chr2 (170-302)||(15896840-15896972)
chr2 (171-303)||(37990012-37990144)
chr2 (171-303)||(41478638-41478770)
chr2 (172-302)||(13197710-13197840)
chr2 (171-304)||(44397546-44397679)
chr2 (171-305)||(38917519-38917653)
chr2 (172-309)||(6648512-6648649)
chr2 (168-308)||(16243777-16243917)
chr2 (172-303)||(37666609-37666740)
chr2 (171-305)||(13344483-13344617)
chr2 (172-302)||(16044317-16044447)
chr2 (171-308)||(15372225-15372362)
chr2 (171-303)||(9047754-9047886)
chr2 (169-305)||(30099179-30099315)
chr2 (172-302)||(12337937-12338067)
chr2 (389-540)||(40392685-40392836)
chr2 (389-541)||(42728145-42728296)
chr2 (389-540)||(44096721-44096871)
chr2 (389-540)||(44754132-44754282)
chr2 (389-509)||(42723007-42723127)
chr2 (389-541)||(44759297-44759448)
chr2 (183-303)||(41492895-41493015)
chr2 (389-507)||(40520003-40520122)
chr2 (168-279)||(4683955-4684066)
chr2 (389-510)||(40518075-40518197)
chr2 (172-311)||(12170390-12170529)
chr2 (200-299)||(44804581-44804680)
chr2 (191-299)||(16734802-16734910)
chr2 (171-271)||(30852648-30852748)
chr2 (178-293)||(31150659-31150769)
chr2 (183-302)||(13724102-13724221)
chr2 (203-262)||(41453090-41453149)
chr2 (182-267)||(36688892-36688977)
chr2 (32-72)||(4163181-4163221)
chr2 (167-303)||(13724097-13724233)
chr2 (172-308)||(15896836-15896972)
chr2 (183-303)||(23227271-23227391)
chr2 (32-72)||(28751342-28751382)
chr2 (171-218)||(41492895-41492942)
chr2 (169-303)||(44398685-44398819)
chr2 (171-304)||(3055556-3055689)
chr2 (177-218)||(44804583-44804624)
chr2 (256-304)||(4684016-4684064)
chr2 (172-308)||(15372220-15372356)
chr2 (171-303)||(37990012-37990144)
chr2 (170-218)||(38917520-38917568)
chr2 (171-303)||(41478638-41478770)
chr2 (171-218)||(6648518-6648565)
chr2 (171-218)||(9047754-9047801)
chr2 (256-303)||(44397546-44397593)
chr2 (187-253)||(4553059-4553125)
chr2 (172-218)||(12337937-12337983)
chr2 (172-218)||(13197710-13197756)
chr2 (256-302)||(13197794-13197840)
chr2 (256-302)||(16044401-16044447)
chr2 (256-302)||(37666694-37666740)
chr2 (248-309)||(23227348-23227409)
chr2 (301-334)||(28751208-28751241)
chr2 (169-226)||(44397623-44397680)
[»] chr5 (62 HSPs)
chr5 (301-509)||(1413100-1413310)
chr5 (301-541)||(36254429-36254669)
chr5 (301-540)||(24770601-24770840)
chr5 (301-541)||(24776054-24776294)
chr5 (172-308)||(9395350-9395486)
chr5 (357-540)||(26709656-26709839)
chr5 (357-540)||(26979390-26979573)
chr5 (171-308)||(36563532-36563669)
chr5 (171-303)||(41989406-41989538)
chr5 (172-311)||(11795168-11795307)
chr5 (171-302)||(37148955-37149086)
chr5 (389-540)||(17510424-17510575)
chr5 (171-308)||(13103023-13103160)
chr5 (171-302)||(23359941-23360072)
chr5 (171-305)||(17025623-17025757)
chr5 (171-308)||(13033050-13033187)
chr5 (171-302)||(20848073-20848203)
chr5 (171-305)||(37641952-37642087)
chr5 (389-541)||(42019939-42020091)
chr5 (389-541)||(43580026-43580180)
chr5 (389-540)||(42024719-42024870)
chr5 (171-302)||(582988-583118)
chr5 (172-303)||(26350349-26350480)
chr5 (389-541)||(17505319-17505473)
chr5 (171-299)||(4443959-4444087)
chr5 (196-304)||(21575970-21576078)
chr5 (400-541)||(41853846-41853989)
chr5 (399-541)||(41858960-41859103)
chr5 (193-302)||(6126845-6126954)
chr5 (171-250)||(38361743-38361822)
chr5 (179-260)||(13539909-13539986)
chr5 (196-288)||(2366352-2366444)
chr5 (181-303)||(966157-966279)
chr5 (206-303)||(35904433-35904528)
chr5 (32-72)||(26709545-26709585)
chr5 (32-72)||(26979279-26979319)
chr5 (552-607)||(42212717-42212772)
chr5 (186-296)||(3549553-3549663)
chr5 (172-266)||(39290775-39290868)
chr5 (235-299)||(9006885-9006949)
chr5 (675-739)||(42212854-42212918)
chr5 (178-268)||(11574114-11574204)
chr5 (172-218)||(23360026-23360072)
chr5 (220-294)||(36595782-36595856)
chr5 (752-802)||(42212911-42212961)
chr5 (844-894)||(42213007-42213056)
chr5 (178-227)||(3549553-3549602)
chr5 (256-312)||(582979-583035)
chr5 (170-218)||(17025708-17025756)
chr5 (256-308)||(37149039-37149091)
chr5 (171-218)||(9395434-9395481)
chr5 (256-303)||(13033050-13033097)
chr5 (256-303)||(13103023-13103070)
chr5 (171-218)||(13103108-13103155)
chr5 (171-218)||(36563537-36563584)
chr5 (171-218)||(41989406-41989453)
chr5 (172-218)||(6126908-6126954)
chr5 (256-302)||(9395350-9395396)
chr5 (181-243)||(13284695-13284757)
chr5 (256-302)||(26350434-26350480)
chr5 (177-226)||(966224-966273)
chr5 (169-218)||(21576030-21576079)
[»] scaffold0166 (2 HSPs)
scaffold0166 (301-540)||(12982-13221)
scaffold0166 (301-541)||(18438-18678)
[»] scaffold0204 (2 HSPs)
scaffold0204 (171-308)||(23784-23921)
scaffold0204 (256-303)||(23784-23831)
[»] scaffold0482 (2 HSPs)
scaffold0482 (171-303)||(12859-12991)
scaffold0482 (256-303)||(12859-12906)
[»] scaffold0009 (2 HSPs)
scaffold0009 (171-302)||(49504-49635)
scaffold0009 (167-303)||(49504-49640)
[»] scaffold0464 (2 HSPs)
scaffold0464 (172-309)||(6124-6261)
scaffold0464 (256-302)||(6215-6261)
[»] scaffold0517 (1 HSPs)
scaffold0517 (389-541)||(3929-4082)
[»] scaffold0014 (2 HSPs)
scaffold0014 (389-510)||(31964-32085)
scaffold0014 (389-510)||(26792-26913)
[»] scaffold1707 (1 HSPs)
scaffold1707 (171-290)||(1334-1453)
[»] scaffold0055 (1 HSPs)
scaffold0055 (389-541)||(3443-3594)
[»] scaffold0052 (1 HSPs)
scaffold0052 (389-541)||(80941-81092)
[»] scaffold0060 (2 HSPs)
scaffold0060 (306-447)||(37572-37712)
scaffold0060 (32-72)||(37473-37514)
[»] scaffold0011 (1 HSPs)
scaffold0011 (172-303)||(231302-231433)
[»] scaffold0415 (1 HSPs)
scaffold0415 (170-302)||(13731-13858)
[»] scaffold0650 (1 HSPs)
scaffold0650 (169-267)||(20-117)
[»] scaffold0171 (1 HSPs)
scaffold0171 (177-268)||(12387-12478)
[»] scaffold0017 (1 HSPs)
scaffold0017 (187-267)||(30042-30122)


Alignment Details
Target: chr8 (Bit Score: 491; Significance: 0; HSPs: 75)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 491; E-Value: 0
Query Start/End: Original strand, 301 - 903
Target Start/End: Complemental strand, 43998780 - 43998179
Alignment:
Q  301 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgt 400  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  43998780 tataatttttggcaagcgctcactttgttcacaaaagtgtgtaccccaagcacacacc-ttggaagtgatatcccacatatataaacactactagagtgt 43998682  T
Q  401 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagt 500  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  43998681 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacatttcaaaggctccacaaaccaactagt 43998582  T
Q  501 atactccaagnnnnnnncattatacactagtgttccaacaacgactcatacacacctacgaagtccaagggttaacataaaatacatgtaagagggagaa 600  Q
    ||||||||||       ||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  43998581 atactccaagtttttttcattatacactagtgttccaacaacgacaaatacacacctacgaagtccaagggttgacataaaatacatgtaagagggagaa 43998482  T
Q  601 taaatgtgatgctatacatgctttatccgatggctataattaattcgttcgtagttgtgcttgttggtctaccaacaagcattttctttaaaaatatgaa 700  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  43998481 taaatgtgatgctatacatgctttatccgatggctataattaattcgttcgtagttgtgcttgttggtctaccaacaatcattttctttaaaaatatgaa 43998382  T
Q  701 tataaattttatcattcatttaaatgaccgattatctctctatctttttggctatctctatttttgtccgagattgaactttgattacatgcttaagaga 800  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43998381 tataaattttatcattcatttaaatgaccgattatctctctatctttttggctatctctatttttgtccgagattgaactttgattacatgcttaagaga 43998282  T
Q  801 tttgattacttaccctgtcatattggnnnnnnnnnnnnnnnnngtacaatttaaagttgagaaattcaaaagtgaagcaaacaagtagcaaccaaccacc 900  Q
    |||||||| |||||||||||||||||                 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43998281 tttgattatttaccctgtcatattggttttttagattttttttgtacaatttaaagttgagaaattcaaaagtgaagcaaacaagtagcaaccaaccacc 43998182  T
Q  901 aca 903  Q
    |||    
T  43998181 aca 43998179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 304 - 540
Target Start/End: Complemental strand, 17955366 - 17955130
Alignment:
Q  304 aatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgtgtg 403  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  17955366 aatttttggcaagcgctcactctgttcacaaaagtgtgtaccccaagggcacacccgtggaagtgatatcccacatatataaacactactagagtgtgtg 17955267  T
Q  404 atctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagtata 503  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  17955266 atctacccaatgtgggacataaaattttcaattcacacttcacactagtttctccatccttgtgtttacattccaaaggctccacaaaacaactagtata 17955167  T
Q  504 ctccaagnnnnnnncattatacactagtgttccaaca 540  Q
    ||| |||       |||||||||||||||||||||||    
T  17955166 ctctaagtcttttccattatacactagtgttccaaca 17955130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 301 - 541
Target Start/End: Complemental strand, 42514083 - 42513843
Alignment:
Q  301 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgt 400  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  42514083 tataatttttggctagcgctcactccgttcacaaaagtgggtaccccaaggacacacccttggaagtgatatcccacatatataaacactactagagtgt 42513984  T
Q  401 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagt 500  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| | ||||||| | ||||||||    
T  42513983 gtgatctatccaatgtgggacataaaattttcaattcacactttacactattttctacatccttgtgtttacattccaatgtctccacataacaactagt 42513884  T
Q  501 atactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    ||||||||||       || |||||||||||||||||||||    
T  42513883 atactccaagtttttgccaatatacactagtgttccaacaa 42513843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 301 - 510
Target Start/End: Original strand, 24885238 - 24885445
Alignment:
Q  301 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgt 400  Q
    ||||||||||||| |||  |||||||||||||||||||| ||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||    
T  24885238 tataatttttggctagc--tcactccgttcacaaaagtgggtaccccaagggtacacccttggaagtgatatcccacatatataaacactactagagtgt 24885335  T
Q  401 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagt 500  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| | ||||||||    
T  24885336 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctacatccttgtgtttacattccaaagtctccacataacaactagt 24885435  T
Q  501 atactccaag 510  Q
    ||||||||||    
T  24885436 atactccaag 24885445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 301 - 540
Target Start/End: Complemental strand, 21641361 - 21641123
Alignment:
Q  301 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgt 400  Q
    ||||||||||||| |||||||||||||||||||||||||  |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21641361 tataatttttggctagcgctcactccgttcacaaaagtggataccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgt 21641262  T
Q  401 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagt 500  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||| |||||||||||| | || |||| | ||||||||    
T  21641261 gtgatctacccaatgtgggacataaaattttcaattcacactttacactag-atctacatccttgtatttacattccaatgtctgcacataacaactagt 21641163  T
Q  501 atactccaagnnnnnnncattatacactagtgttccaaca 540  Q
    ||||| ||||       || ||||||||||||||||||||    
T  21641162 atacttcaagtttttgccaatatacactagtgttccaaca 21641123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 171 - 305
Target Start/End: Complemental strand, 54743 - 54609
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54743 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 54644  T
Q  271 aaattctctaataaataggaccggagggagtataa 305  Q
    ||||||||| |||||||||||||||||||||||||    
T  54643 aaattctcttataaataggaccggagggagtataa 54609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 171 - 304
Target Start/End: Complemental strand, 2890293 - 2890160
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2890293 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 2890194  T
Q  271 aaattctctaataaataggaccggagggagtata 304  Q
    ||||||||| ||||||||||||||||||||||||    
T  2890193 aaattctcttataaataggaccggagggagtata 2890160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 125; E-Value: 7e-64
Query Start/End: Original strand, 171 - 303
Target Start/End: Complemental strand, 7785909 - 7785777
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7785909 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 7785810  T
Q  271 aaattctctaataaataggaccggagggagtat 303  Q
    ||||||||| |||||||||||||||||||||||    
T  7785809 aaattctcttataaataggaccggagggagtat 7785777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 172 - 302
Target Start/End: Original strand, 6552655 - 6552785
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6552655 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 6552754  T
Q  272 aattctctaataaataggaccggagggagta 302  Q
    |||||||| ||||||||||||||||||||||    
T  6552755 aattctcttataaataggaccggagggagta 6552785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 170 - 303
Target Start/End: Complemental strand, 43199486 - 43199353
Alignment:
Q  170 tatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccc 269  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  43199486 tatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacca 43199387  T
Q  270 aaaattctctaataaataggaccggagggagtat 303  Q
    |||||||||| |||||||||||||||||||||||    
T  43199386 aaaattctcttataaataggaccggagggagtat 43199353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 171 - 303
Target Start/End: Complemental strand, 7805830 - 7805698
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  7805830 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgctgaccca 7805731  T
Q  271 aaattctctaataaataggaccggagggagtat 303  Q
    ||||||||| |||||||||||||||||||||||    
T  7805730 aaattctcttataaataggaccggagggagtat 7805698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 169 - 304
Target Start/End: Complemental strand, 25601133 - 25600998
Alignment:
Q  169 atatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacc 268  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  25601133 atatactacctccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacattaacttttgttgacc 25601034  T
Q  269 caaaattctctaataaataggaccggagggagtata 304  Q
    ||||||||||| ||||||||||||||||||||||||    
T  25601033 caaaattctcttataaataggaccggagggagtata 25600998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 172 - 303
Target Start/End: Complemental strand, 39571333 - 39571202
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39571333 tactacctccggtcctatttataagagaaatttagatcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 39571234  T
Q  272 aattctctaataaataggaccggagggagtat 303  Q
    |||||||| |||||||||||||||||||||||    
T  39571233 aattctcttataaataggaccggagggagtat 39571202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 172 - 303
Target Start/End: Complemental strand, 44498317 - 44498186
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  44498317 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttattgacccaa 44498218  T
Q  272 aattctctaataaataggaccggagggagtat 303  Q
    |||||||| |||||||||||||||||||||||    
T  44498217 aattctcttataaataggaccggagggagtat 44498186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 172 - 302
Target Start/End: Complemental strand, 3304408 - 3304278
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3304408 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 3304309  T
Q  272 aattctctaataaataggaccggagggagta 302  Q
    |||| ||| ||||||||||||||||||||||    
T  3304308 aattttcttataaataggaccggagggagta 3304278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 171 - 303
Target Start/End: Complemental strand, 12763785 - 12763653
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12763785 atactacctccggtcttatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 12763686  T
Q  271 aaattctctaataaataggaccggagggagtat 303  Q
    ||||| ||| |||||||||||||||||||||||    
T  12763685 aaattatcttataaataggaccggagggagtat 12763653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 171 - 303
Target Start/End: Complemental strand, 32211494 - 32211362
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  32211494 atactacctccggtcctatttataagagaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatcaatttttgttgaccca 32211395  T
Q  271 aaattctctaataaataggaccggagggagtat 303  Q
    ||||||||| |||||||||||||||||||||||    
T  32211394 aaattctcttataaataggaccggagggagtat 32211362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 172 - 303
Target Start/End: Complemental strand, 32114605 - 32114474
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  32114605 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaatttttgttgacccaa 32114506  T
Q  272 aattctctaataaataggaccggagggagtat 303  Q
    |||| ||| |||||||||||||||||||||||    
T  32114505 aattttcttataaataggaccggagggagtat 32114474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 171 - 302
Target Start/End: Complemental strand, 33289392 - 33289261
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33289392 atactacctccggtcctatttataagagaaatttagatcaacataagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 33289293  T
Q  271 aaattctctaataaataggaccggagggagta 302  Q
    ||||||||| ||||||||||||||||||||||    
T  33289292 aaattctcttataaataggaccggagggagta 33289261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 172 - 296
Target Start/End: Complemental strand, 12343270 - 12343146
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  12343270 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccaaa 12343171  T
Q  272 aattctctaataaataggaccggag 296  Q
    |||||||| ||||||||||||||||    
T  12343170 aattctcttataaataggaccggag 12343146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 172 - 303
Target Start/End: Complemental strand, 15888482 - 15888351
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  15888482 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgacccaa 15888383  T
Q  272 aattctctaataaataggaccggagggagtat 303  Q
    |||||||| |||||||| || |||||||||||    
T  15888382 aattctcttataaatagaactggagggagtat 15888351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 172 - 302
Target Start/End: Original strand, 31654613 - 31654743
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31654613 tactccctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 31654712  T
Q  272 aattctctaataaataggaccggagggagta 302  Q
    |||||| | ||||||||||||||||| ||||    
T  31654713 aattcttttataaataggaccggaggaagta 31654743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 389 - 510
Target Start/End: Original strand, 32016119 - 32016240
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32016119 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 32016218  T
Q  489 aaaccaactagtatactccaag 510  Q
    |||   ||||||||||||||||    
T  32016219 aaattcactagtatactccaag 32016240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 172 - 303
Target Start/End: Original strand, 7012171 - 7012302
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7012171 tactacctccggtcctatttataagagaaatttagatcaacaaaagtgaatatatttggactgaatttttaactagatacatcaacttttgttgatccaa 7012270  T
Q  272 aattctctaataaataggaccggagggagtat 303  Q
    |||||||| ||||||||||||||||| |||||    
T  7012271 aattctcttataaataggaccggaggaagtat 7012302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 389 - 541
Target Start/End: Original strand, 32010945 - 32011096
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32010945 ctactagagtgtatgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 32011044  T
Q  489 aaaccaactagtatactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    ||||  ||||||||||||||||       || |||||||||||||||||||||    
T  32011045 aaactcactagtatactccaag-tttttccaatatacactagtgttccaacaa 32011096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 389 - 541
Target Start/End: Complemental strand, 2165542 - 2165389
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacatt-ccaaaggctcca 487  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  2165542 ctactagagtgtgtgatctacccgatgtgagacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattcccaaagactcca 2165443  T
Q  488 caaaccaactagtatactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    |||||  |||||||||||||||        ||||||||||||||||||||||||    
T  2165442 caaactcactagtatactccaaaattttttcattatacactagtgttccaacaa 2165389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 170 - 303
Target Start/End: Original strand, 13578855 - 13578988
Alignment:
Q  170 tatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccc 269  Q
    |||||||||||| || ||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  13578855 tatactacctccagttctatttataagagaaatttaggtcaataaaagtgaatgtatttgaactgaatttttaactagatacatcaacttttgttgaccc 13578954  T
Q  270 aaaattctctaataaataggaccggagggagtat 303  Q
    |||||||||| ||||||| ||| ||| |||||||    
T  13578955 aaaattctcttataaatatgactggatggagtat 13578988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 175 - 306
Target Start/End: Original strand, 28463614 - 28463745
Alignment:
Q  175 tacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaat 274  Q
    ||||||||||||||||||||||||||| || ||| |||||||||  |||||||||||||||||||| ||| ||||| ||||||||| | |||||||| ||    
T  28463614 tacctccggtcctatttataagagaaagttgggtcaacaaaagttgatgtatttggactgaattttgaaccagatatatcaactttcggtgacccaatat 28463713  T
Q  275 tctctaataaataggaccggagggagtataat 306  Q
    |||  ||||||||||| |||||||||||||||    
T  28463714 tctgcaataaataggatcggagggagtataat 28463745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 172 - 303
Target Start/End: Original strand, 8587170 - 8587301
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    |||| ||||||||||||||||||||||||| || ||| |||||||||  |||||||| |||| ||||||||||||||||||||||||||| ||||| |||    
T  8587170 tactccctccggtcctatttataagagaaagtttggtcaacaaaagttgatgtattttgactaaatttttaactagatacatcaacttttattgactcaa 8587269  T
Q  272 aattctctaataaataggaccggagggagtat 303  Q
      |||||| ||||||| ||||||||| |||||    
T  8587270 gtttctcttataaataagaccggaggaagtat 8587301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 170 - 308
Target Start/End: Original strand, 27422191 - 27422326
Alignment:
Q  170 tatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccc 269  Q
    |||||| ||||||||||||||||||||| ||| ||  || |||||   |  |||||||||||||||||||||||| ||||||||  | ||||||||||||    
T  27422191 tatacttcctccggtcctatttataagataaagttgagtcaacaa---ttcatgtatttggactgaatttttaaccagatacattcatttttgttgaccc 27422287  T
Q  270 aaaattctctaataaataggaccggagggagtataattt 308  Q
    ||| |||||| ||||||||||||| ||||||||| ||||    
T  27422288 aaatttctcttataaataggaccgaagggagtattattt 27422326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 171 - 234
Target Start/End: Complemental strand, 4245712 - 4245649
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactg 234  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  4245712 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactg 4245649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 171 - 295
Target Start/End: Complemental strand, 24692109 - 24691986
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    ||||| ||| || |||||||||||||| ||| |||||| |||||||||  |||||| || |||||||||| ||| ||||| |||||||||||||||||||    
T  24692109 atactcccttcgatcctatttataagaaaaagttaggtcaacaaaagttgatgtatctgaactgaatttt-aaccagatatatcaacttttgttgaccca 24692011  T
Q  271 aaattctctaataaataggaccgga 295  Q
    || |||| | | |||||||||||||    
T  24692010 aatttcttttaaaaataggaccgga 24691986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 171 - 306
Target Start/End: Original strand, 33057593 - 33057728
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    ||||| ||||||||||||||||||||| ||| || | | ||||||| |   |||||  ||| |||| ||||||| ||||||||||| ||||||||||| |    
T  33057593 atactccctccggtcctatttataagacaaagttggatcaacaaaaattgttgtatccggagtgaaattttaaccagatacatcaatttttgttgaccaa 33057692  T
Q  271 aaattctctaataaataggaccggagggagtataat 306  Q
    |  |||||| ||||||| ||||||| ||||||||||    
T  33057693 actttctcttataaataagaccggatggagtataat 33057728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 177 - 287
Target Start/End: Original strand, 17006916 - 17007026
Alignment:
Q  177 cctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattc 276  Q
    |||||| |||||||||||||||||| || ||| |||||||||  ||| || ||||||||||| ||||  |||||||||||||||| |||||  ||| |||    
T  17006916 cctccgatcctatttataagagaaagttgggtcaacaaaagttgatggatctggactgaattgttaatcagatacatcaacttttattgactaaaatttc 17007015  T
Q  277 tctaataaata 287  Q
    ||| |||||||    
T  17007016 tcttataaata 17007026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 177 - 287
Target Start/End: Complemental strand, 17570331 - 17570221
Alignment:
Q  177 cctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattc 276  Q
    |||||| |||||||||||||||||| || ||| |||||||||  ||| || ||||||||||| ||||  |||||||||||||||| |||||  ||| |||    
T  17570331 cctccgatcctatttataagagaaagttgggtcaacaaaagttgatggatctggactgaattgttaatcagatacatcaacttttattgactaaaatttc 17570232  T
Q  277 tctaataaata 287  Q
    ||| |||||||    
T  17570231 tcttataaata 17570221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 74
Target Start/End: Complemental strand, 43998922 - 43998880
Alignment:
Q  32 acgtgtgagacttggtctccgtgtgcgggaatctcggagcacc 74  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  43998922 acgtgtgagacttggtctccgtgtgcgggaatctcggagcacc 43998880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 248 - 302
Target Start/End: Complemental strand, 8587224 - 8587170
Alignment:
Q  248 atacatcaacttttgttgacccaaaattctctaataaataggaccggagggagta 302  Q
    ||||||||||||||||||||| ||  |||||| ||||||||||||||||||||||    
T  8587224 atacatcaacttttgttgaccaaactttctcttataaataggaccggagggagta 8587170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 226
Target Start/End: Original strand, 25600996 - 25601054
Alignment:
Q  168 tatatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtat 226  Q
    |||||||| |||||||||||||||||||||||| ||| ||| ||||||||| |||||||    
T  25600996 tatatactccctccggtcctatttataagagaattttgggtcaacaaaagttaatgtat 25601054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 43998833 - 43998779
Alignment:
Q  120 tatatttctttatagaca-gcccaagcccggcccggtcgtcacgcgtcttatata 173  Q
    |||||||||||||||||| |||||||||||||||| ||||| |||||||||||||    
T  43998833 tatatttctttatagacaagcccaagcccggcccgatcgtcgcgcgtcttatata 43998779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 301 - 350
Target Start/End: Complemental strand, 21641736 - 21641687
Alignment:
Q  301 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaag 350  Q
    ||||||||||||| |||||||||||||||||||||||||  |||||||||    
T  21641736 tataatttttggctagcgctcactccgttcacaaaagtggataccccaag 21641687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 301 - 350
Target Start/End: Complemental strand, 21642111 - 21642062
Alignment:
Q  301 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaag 350  Q
    ||||||||||||| |||||||||||||||||||||||||  |||||||||    
T  21642111 tataatttttggctagcgctcactccgttcacaaaagtggataccccaag 21642062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 301 - 350
Target Start/End: Complemental strand, 21642486 - 21642437
Alignment:
Q  301 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaag 350  Q
    ||||||||||||| |||||||||||||||||||||||||  |||||||||    
T  21642486 tataatttttggctagcgctcactccgttcacaaaagtggataccccaag 21642437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 301 - 350
Target Start/End: Complemental strand, 21642861 - 21642812
Alignment:
Q  301 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaag 350  Q
    ||||||||||||| |||||||||||||||||||||||||  |||||||||    
T  21642861 tataatttttggctagcgctcactccgttcacaaaagtggataccccaag 21642812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 301 - 350
Target Start/End: Complemental strand, 21643236 - 21643187
Alignment:
Q  301 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaag 350  Q
    ||||||||||||| |||||||||||||||||||||||||  |||||||||    
T  21643236 tataatttttggctagcgctcactccgttcacaaaagtggataccccaag 21643187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 248 - 297
Target Start/End: Complemental strand, 28463665 - 28463616
Alignment:
Q  248 atacatcaacttttgttgacccaaaattctctaataaataggaccggagg 297  Q
    ||||||||||||||||||||||||  |||||| |||||||||||||||||    
T  28463665 atacatcaacttttgttgacccaactttctcttataaataggaccggagg 28463616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 308
Target Start/End: Original strand, 43199353 - 43199490
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    ||||| |||||||||||||||||||||||| ||| ||| |||||||||  |||||| | |    || ||    | | ||||||  ||||||||||||| |    
T  43199353 atactccctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 43199452  T
Q  271 aaattctctaataaataggaccggagggagtataattt 308  Q
    || |||||| ||||||||||||||||| ||||||||||    
T  43199453 aatttctcttataaataggaccggaggtagtataattt 43199490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 226
Target Start/End: Complemental strand, 27422321 - 27422266
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtat 226  Q
    ||||| ||| |||||||||||||||||||||||| ||| ||||||| |||||||||    
T  27422321 atactcccttcggtcctatttataagagaaatttgggtcaacaaaaatgaatgtat 27422266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 308
Target Start/End: Original strand, 54610 - 54748
Alignment:
Q  170 tatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccc 269  Q
    |||||| |||||||||||||||||||||||| ||| ||| |||||||||  |||||| | |    || ||    | | ||||||  |||||||||||||     
T  54610 tatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 54709  T
Q  270 aaaattctctaataaataggaccggagggagtataattt 308  Q
    ||| |||||| ||||||||||||||||| ||||| ||||    
T  54710 aaatttctcttataaataggaccggaggtagtattattt 54748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 303
Target Start/End: Original strand, 2890159 - 2890293
Alignment:
Q  169 atatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacc 268  Q
    ||||||| |||||||||||||||||||||||| ||| ||| |||||||||  |||||| | |    || ||    | | ||||||  |||||||||||||    
T  2890159 atatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacc 2890258  T
Q  269 caaaattctctaataaataggaccggagggagtat 303  Q
     ||| |||||| ||||||||||||||||| |||||    
T  2890259 taaatttctcttataaataggaccggaggtagtat 2890293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 256 - 302
Target Start/End: Complemental strand, 31654659 - 31654613
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagta 302  Q
    ||||||||||||| ||| |||||| ||||||||||||||||||||||    
T  31654659 acttttgttgacctaaatttctcttataaataggaccggagggagta 31654613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 246 - 299
Target Start/End: Complemental strand, 17006967 - 17006914
Alignment:
Q  246 agatacatcaacttttgttgacccaaaattctctaataaataggaccggaggga 299  Q
    |||| |||||||||||||||||||||  |||||| |||||||||| ||||||||    
T  17006967 agatccatcaacttttgttgacccaactttctcttataaataggatcggaggga 17006914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 246 - 299
Target Start/End: Original strand, 17570280 - 17570333
Alignment:
Q  246 agatacatcaacttttgttgacccaaaattctctaataaataggaccggaggga 299  Q
    |||| |||||||||||||||||||||  |||||| |||||||||| ||||||||    
T  17570280 agatccatcaacttttgttgacccaactttctcttataaataggatcggaggga 17570333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 303
Target Start/End: Original strand, 7785777 - 7785909
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    ||||| |||||||||||||||||||||||| ||| ||| |||||||||  |||||| | |    || ||    | | ||||||  ||||||||||||| |    
T  7785777 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 7785876  T
Q  271 aaattctctaataaataggaccggagggagtat 303  Q
    || |||||| ||||||||||||||||| |||||    
T  7785877 aatttctcttataaataggaccggaggtagtat 7785909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 246 - 294
Target Start/End: Complemental strand, 15688086 - 15688038
Alignment:
Q  246 agatacatcaacttttgttgacccaaaattctctaataaataggaccgg 294  Q
    ||||||||||||||||||||||||||  |||||| ||||| ||||||||    
T  15688086 agatacatcaacttttgttgacccaactttctcttataaacaggaccgg 15688038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 249 - 301
Target Start/End: Complemental strand, 30171535 - 30171483
Alignment:
Q  249 tacatcaacttttgttgacccaaaattctctaataaataggaccggagggagt 301  Q
    ||||| ||||||||||||| |||||||||||  ||||||||| ||||||||||    
T  30171535 tacattaacttttgttgactcaaaattctcttgtaaataggatcggagggagt 30171483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 256 - 303
Target Start/End: Original strand, 4245665 - 4245712
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagtat 303  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| |||||    
T  4245665 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 4245712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 256 - 303
Target Start/End: Original strand, 7805783 - 7805830
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagtat 303  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| |||||    
T  7805783 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 7805830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 286
Target Start/End: Complemental strand, 35564757 - 35564706
Alignment:
Q  235 aatttttaactagatacatcaacttttgttgacccaaaattctctaataaat 286  Q
    |||||| ||||||||||||||| |||||||||| ||||| ||||| ||||||    
T  35564757 aattttgaactagatacatcaaattttgttgactcaaaaatctcttataaat 35564706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 218
Target Start/End: Original strand, 39571202 - 39571249
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    ||||| |||||||||||||||||||||||| ||| ||| |||||||||    
T  39571202 atactccctccggtcctatttataagagaattttgggtcaacaaaagt 39571249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 3304362 - 3304408
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagta 302  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| ||||    
T  3304362 acttttgttgacctaaatttctcttataaataggaccggaggtagta 3304408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 256 - 302
Target Start/End: Complemental strand, 6552701 - 6552655
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagta 302  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| ||||    
T  6552701 acttttgttgacctaaatttctcttataaataggaccggaggtagta 6552655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 6552785 - 6552739
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    |||| |||||||||||||||||||||||| ||| ||| |||||||||    
T  6552785 tactccctccggtcctatttataagagaattttgggtcaacaaaagt 6552739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 205
Target Start/End: Original strand, 6899418 - 6899452
Alignment:
Q  171 atactacctccggtcctatttataagagaaattta 205  Q
    ||||||||||||||||||||||||||| |||||||    
T  6899418 atactacctccggtcctatttataagaaaaattta 6899452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 12343224 - 12343270
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagta 302  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| ||||    
T  12343224 acttttgttgacctaaatttctcttataaataggaccggaggtagta 12343270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 229
Target Start/End: Original strand, 13246801 - 13246851
Alignment:
Q  179 tccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttg 229  Q
    |||| ||||||||||||||||||||| | | ||||||| ||||||||||||    
T  13246801 tccgatcctatttataagagaaatttggatcaacaaaaatgaatgtatttg 13246851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 15888436 - 15888482
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagta 302  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| ||||    
T  15888436 acttttgttgacctaaatttctcttataaataggaccggaggtagta 15888482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 32114559 - 32114605
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagta 302  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| ||||    
T  32114559 acttttgttgacctaaatttctcttataaataggaccggaggtagta 32114605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 247 - 309
Target Start/End: Complemental strand, 33057649 - 33057587
Alignment:
Q  247 gatacatcaacttttgttgacccaaaattctctaataaataggaccggagggagtataatttt 309  Q
    |||||| ||| ||||||||| ||||  || ||| ||||||||||||||||||||||| |||||    
T  33057649 gatacaacaatttttgttgatccaactttgtcttataaataggaccggagggagtattatttt 33057587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 33289261 - 33289307
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    |||| |||||||||||||||||||||||| ||| ||| |||||||||    
T  33289261 tactccctccggtcctatttataagagaattttgggtcaacaaaagt 33289307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 44498271 - 44498317
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagta 302  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| ||||    
T  44498271 acttttgttgacctaaatttctcttataaataggaccggaggtagta 44498317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 295
Target Start/End: Complemental strand, 13246886 - 13246801
Alignment:
Q  210 aacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctctaataaataggaccgga 295  Q
    |||||||||  |||||| |||||||||||||||   | ||||||  | ||||||||| ||||| |||||| |||||||||| ||||    
T  13246886 aacaaaagttcatgtatctggactgaatttttagtcaaatacattcatttttgttgatccaaatttctcttataaataggatcgga 13246801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 246 - 303
Target Start/End: Original strand, 24692052 - 24692109
Alignment:
Q  246 agatacatcaacttttgttgacccaaaattctctaataaataggaccggagggagtat 303  Q
    ||||||||||||||||||||||| ||  || ||| |||||||||| || |||||||||    
T  24692052 agatacatcaacttttgttgacctaactttttcttataaataggatcgaagggagtat 24692109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 32211362 - 32211407
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaa 216  Q
    ||||| |||||||||||||||||||||||| ||| ||| |||||||    
T  32211362 atactccctccggtcctatttataagagaattttgggtcaacaaaa 32211407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 258 - 303
Target Start/End: Original strand, 32211449 - 32211494
Alignment:
Q  258 ttttgttgacccaaaattctctaataaataggaccggagggagtat 303  Q
    ||||||||||| ||| |||||| ||||||||||||||||| |||||    
T  32211449 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 32211494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 314 - 395
Target Start/End: Complemental strand, 42157397 - 42157316
Alignment:
Q  314 aagcgctcactccgttcacaaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactag 395  Q
    ||||||||||||||||||||||| || ||||| ||||  ||| || | ||| |||||   |||| |||||||||||||||||    
T  42157397 aagcgctcactccgttcacaaaaatgggtacctcaagggcacgccttcggatgtgatccaccacttatataaacactactag 42157316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 200; Significance: 1e-108; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 301 - 541
Target Start/End: Complemental strand, 21080556 - 21080316
Alignment:
Q  301 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgt 400  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21080556 tataatttttagcaagcgctcactccattcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgt 21080457  T
Q  401 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagt 500  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21080456 gtgatctacccaacgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagt 21080357  T
Q  501 atactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    ||||||||||       ||||||||||||||||||||||||    
T  21080356 atactccaagttttttccattatacactagtgttccaacaa 21080316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 301 - 540
Target Start/End: Complemental strand, 2234187 - 2233948
Alignment:
Q  301 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgt 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||| |||||||||||||||||||||||    
T  2234187 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagggaacacccttggaagtgatatcccatatatataaacactactagagtgt 2234088  T
Q  401 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagt 500  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  2234087 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttcttcatccttgtgtttacattccaaaggctccacaaaccaactagt 2233988  T
Q  501 atactccaagnnnnnnncattatacactagtgttccaaca 540  Q
    ||||||||||       || |||||||||| |||||||||    
T  2233987 atactccaagttttttccaatatacactagggttccaaca 2233948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 185; E-Value: 1e-99
Query Start/End: Original strand, 307 - 540
Target Start/End: Complemental strand, 32212194 - 32211961
Alignment:
Q  307 ttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatc 406  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32212194 ttttggcaagcgctcactccgttcacaaaagtgggtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatc 32212095  T
Q  407 tacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagtatactc 506  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| | ||||||||||||||    
T  32212094 tacccaatgtgagacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaagtctcaacataacaactagtatactc 32211995  T
Q  507 caagnnnnnnncattatacactagtgttccaaca 540  Q
    ||||       || ||||||||||||||||||||    
T  32211994 caagtttttgccaatatacactagtgttccaaca 32211961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 301 - 541
Target Start/End: Original strand, 17496012 - 17496252
Alignment:
Q  301 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgt 400  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  17496012 tataatttttggctagcgctcactccgttcacaaaagtgggtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgt 17496111  T
Q  401 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagt 500  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | ||||||||    
T  17496112 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctacatccttgtgtttacatttcaaagtctccacataacaactagt 17496211  T
Q  501 atactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    ||||||||||       || |||| ||||||||||||||||    
T  17496212 atactccaagtttttgccaatatatactagtgttccaacaa 17496252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 301 - 541
Target Start/End: Complemental strand, 17557202 - 17556962
Alignment:
Q  301 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgt 400  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  17557202 tataatttttggctagcgctcactccgttcacaaaagtgggtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgt 17557103  T
Q  401 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagt 500  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | ||||||||    
T  17557102 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctacatccttgtgtttacatttcaaagtctccacataacaactagt 17557003  T
Q  501 atactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    ||||||||||       || |||| ||||||||||||||||    
T  17557002 atactccaagtttttgccaatatatactagtgttccaacaa 17556962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 301 - 541
Target Start/End: Original strand, 12934996 - 12935236
Alignment:
Q  301 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgt 400  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||  |||||| ||||||||||| ||||||||||||||||||||||| |||||    
T  12934996 tataatttttggctagcgctcactccgttcacaaaagtgggtaccccaagggcacaccattggaagtgatttcccacatatataaacactactaaagtgt 12935095  T
Q  401 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagt 500  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | ||||||||    
T  12935096 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctacatccttgtgtttacatttcaaagtctccacataacaactagt 12935195  T
Q  501 atactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    ||||||||||       || |||||||||||||||||||||    
T  12935196 atactccaagtttttgccaatatacactagtgttccaacaa 12935236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 301 - 540
Target Start/End: Complemental strand, 19309111 - 19308872
Alignment:
Q  301 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgt 400  Q
    ||||||||||||| ||||||||||||||||||||||||  ||||||||||  |||| ||||||||||||| |||||||||||||||||||||||||||||    
T  19309111 tataatttttggctagcgctcactccgttcacaaaagtaggtaccccaagggcacatccttggaagtgatttcccacatatataaacactactagagtgt 19309012  T
Q  401 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagt 500  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | ||||||||    
T  19309011 gtgatctatccaatgtgggacataaaattttcaattcacactttacactagtttctacatccttgtgtttacatttcaaagtctccacataacaactagt 19308912  T
Q  501 atactccaagnnnnnnncattatacactagtgttccaaca 540  Q
    ||||||||||       || ||||||||||||||||||||    
T  19308911 atactccaagtttttgccaatatacactagtgttccaaca 19308872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 160; E-Value: 9e-85
Query Start/End: Original strand, 301 - 541
Target Start/End: Original strand, 43893454 - 43893694
Alignment:
Q  301 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgt 400  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||    
T  43893454 tataatttttggctagcgctcactccgttcacaaaagtgggtaccccaagggcacacccttggaagtgatttcccacatatataaacactactagagtgt 43893553  T
Q  401 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagt 500  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||| | |||| || | ||||||||    
T  43893554 gtgatctacccaatgagggacataaaattttcaattcacactttacgctagtttctacatcattgtgtttacattccaatgtctcctcataacaactagt 43893653  T
Q  501 atactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    ||||||||||       || |||||||||||||||||||||    
T  43893654 atactccaagtttttgccaatatacactagtgttccaacaa 43893694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 301 - 510
Target Start/End: Complemental strand, 16538908 - 16538699
Alignment:
Q  301 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgt 400  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||| || |||||    
T  16538908 tataatttttggctagcgctcactccgttcacaaaagtgggtaccccaagggcacacccttggaagtgatatcccacatatataaacactattaaagtgt 16538809  T
Q  401 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagt 500  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||| | ||||||||    
T  16538808 gtgatctactcaatatgggacataaaattttcaattcacactttacactagtttctacatccttgtgtctacattccaaagtctccacataacaactagt 16538709  T
Q  501 atactccaag 510  Q
    ||||||||||    
T  16538708 atactccaag 16538699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 301 - 510
Target Start/End: Original strand, 16626754 - 16626963
Alignment:
Q  301 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgt 400  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||| || |||||    
T  16626754 tataatttttggctagcgctcactccgttcacaaaagtgggtaccccaagggcacacccttggaagtgatatcccacatatataaacactattaaagtgt 16626853  T
Q  401 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagt 500  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||| | ||||||||    
T  16626854 gtgatctactcaatatgggacataaaattttcaattcacactttacactagtttctacatccttgtgtctacattccaaagtctccacataacaactagt 16626953  T
Q  501 atactccaag 510  Q
    ||||||||||    
T  16626954 atactccaag 16626963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 332 - 540
Target Start/End: Original strand, 42572543 - 42572751
Alignment:
Q  332 caaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaaatttt 431  Q
    |||||||| ||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42572543 caaaagtgggtaccccaagggcacacccttggaagtgatttcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaaatttt 42572642  T
Q  432 caattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagtatactccaagnnnnnnncattatacactagt 531  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | ||||||||||||||||||       || |||||||||||    
T  42572643 caattcacactttacactagtttctacatccttgtgtttacatttcaaagtctccacataacaactagtatactccaagtttttgccaatatacactagt 42572742  T
Q  532 gttccaaca 540  Q
    |||||||||    
T  42572743 gttccaaca 42572751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 318 - 541
Target Start/End: Complemental strand, 47176713 - 47176491
Alignment:
Q  318 gctcactccgttcacaaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtg 417  Q
    |||||||||||||||||||||| |||||| |||  ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  47176713 gctcactccgttcacaaaagtgggtaccc-aagggcactcccttggaagtgatttcccacatatataaacactactagagtgtgtgatctacccaatgtg 47176615  T
Q  418 ggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagtatactccaagnnnnnnn 517  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| | |||| || | ||||||||||||||||||           
T  47176614 ggacataaaattttcaattcacactttacactagtttctacatcattgtgtttacattccaatgtctcctcataacaactagtatactccaagtttttgc 47176515  T
Q  518 cattatacactagtgttccaacaa 541  Q
    || |||||||||||||||||||||    
T  47176514 caatatacactagtgttccaacaa 47176491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 171 - 309
Target Start/End: Original strand, 7240748 - 7240886
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7240748 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 7240847  T
Q  271 aaattctctaataaataggaccggagggagtataatttt 309  Q
    ||||||||| ||||||||||||||||||||||| |||||    
T  7240848 aaattctcttataaataggaccggagggagtattatttt 7240886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 165 - 303
Target Start/End: Complemental strand, 38064050 - 38063912
Alignment:
Q  165 tcttatatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgtt 264  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38064050 tcttatatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgtt 38063951  T
Q  265 gacccaaaattctctaataaataggaccggagggagtat 303  Q
    ||||||||||||||| |||||||||||| ||||||||||    
T  38063950 gacccaaaattctcttataaataggaccagagggagtat 38063912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 125; E-Value: 7e-64
Query Start/End: Original strand, 171 - 303
Target Start/End: Complemental strand, 1738578 - 1738446
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1738578 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 1738479  T
Q  271 aaattctctaataaataggaccggagggagtat 303  Q
    ||||||||| |||||||||||||||||||||||    
T  1738478 aaattctcttataaataggaccggagggagtat 1738446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 170 - 309
Target Start/End: Original strand, 7482223 - 7482362
Alignment:
Q  170 tatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccc 269  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  7482223 tatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgaactgaatttttaactagatacatcaacttttgttgaccc 7482322  T
Q  270 aaaattctctaataaataggaccggagggagtataatttt 309  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  7482323 aaaattctcttataaataggaccggagggagtattatttt 7482362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 171 - 302
Target Start/End: Original strand, 46840859 - 46840990
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46840859 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 46840958  T
Q  271 aaattctctaataaataggaccggagggagta 302  Q
    ||||||||| ||||||||||||||||||||||    
T  46840959 aaattctcttataaataggaccggagggagta 46840990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 171 - 304
Target Start/End: Original strand, 9268755 - 9268888
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9268755 atactacctctggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 9268854  T
Q  271 aaattctctaataaataggaccggagggagtata 304  Q
    ||||||||| ||||||||||||||||||||||||    
T  9268855 aaattctcttataaataggaccggagggagtata 9268888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 171 - 306
Target Start/End: Complemental strand, 1565860 - 1565725
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1565860 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 1565761  T
Q  271 aaattctctaataaataggaccggagggagtataat 306  Q
    ||||||||| |||||||| |||| ||||||||||||    
T  1565760 aaattctcttataaatagaaccgaagggagtataat 1565725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 389 - 541
Target Start/End: Original strand, 33238421 - 33238573
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33238421 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 33238520  T
Q  489 aaaccaactagtatactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    ||||  ||||||||||||||||       ||||||||||||||||||||||||    
T  33238521 aaactcactagtatactccaagtttttttcattatacactagtgttccaacaa 33238573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 172 - 302
Target Start/End: Complemental strand, 23314269 - 23314139
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  23314269 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatatatcaacttttgttgacccaa 23314170  T
Q  272 aattctctaataaataggaccggagggagta 302  Q
    |||||||| ||||||||||||||||||||||    
T  23314169 aattctcttataaataggaccggagggagta 23314139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 172 - 302
Target Start/End: Complemental strand, 31319529 - 31319399
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31319529 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 31319430  T
Q  272 aattctctaataaataggaccggagggagta 302  Q
    |||||||| |||||||| |||||||||||||    
T  31319429 aattctcttataaatagaaccggagggagta 31319399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 171 - 302
Target Start/End: Original strand, 22285698 - 22285829
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  22285698 atactccctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgaccca 22285797  T
Q  271 aaattctctaataaataggaccggagggagta 302  Q
    ||||||||| ||||||||||||||||||||||    
T  22285798 aaattctcttataaataggaccggagggagta 22285829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 389 - 541
Target Start/End: Original strand, 33243598 - 33243750
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  33243598 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacatgccaaaggctccac 33243697  T
Q  489 aaaccaactagtatactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    ||||  ||||||||||||||||       ||||||||||||||||||||||||    
T  33243698 aaactcactagtatactccaagtttttttcattatacactagtgttccaacaa 33243750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 172 - 303
Target Start/End: Original strand, 36583395 - 36583526
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  36583395 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggacttaatttttaactagatacatcaacttttgttgacccaa 36583494  T
Q  272 aattctctaataaataggaccggagggagtat 303  Q
    |||||||| |||||||||| ||||||||||||    
T  36583495 aattctcttataaataggatcggagggagtat 36583526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 171 - 308
Target Start/End: Complemental strand, 28536882 - 28536745
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||    
T  28536882 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggaatgaatttttaactagatacatcaacttttattgatcca 28536783  T
Q  271 aaattctctaataaataggaccggagggagtataattt 308  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  28536782 aaattctcttataaataggaccggagggagtatcattt 28536745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 172 - 308
Target Start/End: Complemental strand, 94448 - 94312
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  94448 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggacagaatttttaactagatacatcaacttttgttgacccaa 94349  T
Q  272 aattctctaataaataggaccggagggagtataattt 308  Q
    |||||||| |||||||||| ||||||||||| |||||    
T  94348 aattctcttataaataggatcggagggagtacaattt 94312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 172 - 302
Target Start/End: Original strand, 38441460 - 38441590
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  38441460 tactacctccggtcctatttataagagaaatttatgtcaacaaaagtgaatgtatttgaactgaatttttaactagatacatcaacttttgttgacccaa 38441559  T
Q  272 aattctctaataaataggaccggagggagta 302  Q
    |||||||| ||||||||||||||||| ||||    
T  38441560 aattctcttataaataggaccggaggaagta 38441590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 389 - 541
Target Start/End: Original strand, 47994219 - 47994370
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47994219 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 47994318  T
Q  489 aaaccaactagtatactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    ||||  ||||||||||||||||       || |||||||||||||||||||||    
T  47994319 aaactcactagtatactccaag-ttttttcaatatacactagtgttccaacaa 47994370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 172 - 302
Target Start/End: Complemental strand, 36016326 - 36016196
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  36016326 tactccctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgacccaa 36016227  T
Q  272 aattctctaataaataggaccggagggagta 302  Q
    |||||||| |||||||||||| || ||||||    
T  36016226 aattctcttataaataggaccagatggagta 36016196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 171 - 303
Target Start/End: Original strand, 4790247 - 4790379
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  4790247 atactacctccggtcctatttataagaaaaatttaggtcaacaaaaatgaatgtatttggactaaatttttaactagatacatcaacttttattgaccca 4790346  T
Q  271 aaattctctaataaataggaccggagggagtat 303  Q
    ||||||||| ||||||||||||||||| |||||    
T  4790347 aaattctcttataaataggaccggaggaagtat 4790379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 389 - 541
Target Start/End: Original strand, 47999394 - 47999545
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  47999394 ctactagagtgtgtgatctacccgatgtgagacataaaattttcaattcacactttacactagtttctccatccttatgtttacattccaaaggctccac 47999493  T
Q  489 aaaccaactagtatactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    ||||  |||| |||||||||||       || |||||||||||||||||||||    
T  47999494 aaactcactaatatactccaag-tttttccaatatacactagtgttccaacaa 47999545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 188 - 296
Target Start/End: Original strand, 33418392 - 33418500
Alignment:
Q  188 atttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctctaataaata 287  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  33418392 atttttaagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgacccaaaattctcttataaata 33418491  T
Q  288 ggaccggag 296  Q
    |||||||||    
T  33418492 ggaccggag 33418500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 178 - 295
Target Start/End: Complemental strand, 40840243 - 40840126
Alignment:
Q  178 ctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 277  Q
    ||||||||||||||| |||||||| ||| |||||||||| | |||||||||||||||||||||||||||  |||||||||||||||||||  ||| ||||    
T  40840243 ctccggtcctatttagaagagaaagttaagttaacaaaaatcaatgtatttggactgaatttttaactaagtacatcaacttttgttgacaaaaatttct 40840144  T
Q  278 ctaataaataggaccgga 295  Q
    || |||||||||||||||    
T  40840143 cttataaataggaccgga 40840126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 171 - 302
Target Start/End: Original strand, 9575408 - 9575539
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    ||||| |||| |||||||||| ||||||||| || ||| ||||||||| || |||||| ||||||||||||||||||||||||||| ||||||||||| |    
T  9575408 atactccctctggtcctatttgtaagagaaagttgggtcaacaaaagttaacgtatttagactgaatttttaactagatacatcaagttttgttgaccaa 9575507  T
Q  271 aaattctctaataaataggaccggagggagta 302  Q
    |  |||||| ||||||||||||| ||||||||    
T  9575508 actttctcttataaataggaccgaagggagta 9575539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 172 - 295
Target Start/End: Complemental strand, 7269535 - 7269412
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    |||| ||||||||| ||||||||||| ||| || ||| ||||||| |  |||||| |  |||||||||||||| |||| |||||||||||||| ||||||    
T  7269535 tactccctccggtcttatttataagaaaaagttgggtcaacaaaaattgatgtatctaaactgaatttttaaccagatgcatcaacttttgttaacccaa 7269436  T
Q  272 aattctctaataaataggaccgga 295  Q
      |||||| |||||||||||||||    
T  7269435 ctttctcttataaataggaccgga 7269412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 457 - 541
Target Start/End: Complemental strand, 47544828 - 47544744
Alignment:
Q  457 ccatccttgtgtttacattccaaaggctccacaaaccaactagtatactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||||||||       ||||||||||||||||||||||||    
T  47544828 ccatccttgtgtttacattccaaaggctccacaaactctctagtatactccaagtttttttcattatacactagtgttccaacaa 47544744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 167 - 304
Target Start/End: Original strand, 7661071 - 7661208
Alignment:
Q  167 ttatatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttga 266  Q
    ||||||||| ||| || |||||||||||||||||||||| || || ||||||  |||||  |||    ||  ||  ||||||||||||||||||||||||    
T  7661071 ttatatactcccttcgatcctatttataagagaaatttatgtcaataaaagttgatgtagctggtaaaaaaattggactagatacatcaacttttgttga 7661170  T
Q  267 cccaaaattctctaataaataggaccggagggagtata 304  Q
    ||||||  ||||  |||||||||||| |||||||||||    
T  7661171 cccaaatgtctcatataaataggaccagagggagtata 7661208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 168 - 304
Target Start/End: Complemental strand, 7661210 - 7661074
Alignment:
Q  168 tatatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgac 267  Q
    |||||||| |||| ||||||||||||| |||| |||| ||| |||||||||  |||||| | | |  | ||||| || || ||||||||||||| |||||    
T  7661210 tatatactccctctggtcctatttatatgagacatttgggtcaacaaaagttgatgtatctagtccaatttttttaccagctacatcaacttttattgac 7661111  T
Q  268 ccaaaattctctaataaataggaccggagggagtata 304  Q
      ||| |||||| |||||||||| || ||||||||||    
T  7661110 ataaatttctcttataaataggatcgaagggagtata 7661074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 72
Target Start/End: Complemental strand, 21080681 - 21080642
Alignment:
Q  33 cgtgtgagacttggtctccgtgtgcgggaatctcggagca 72  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  21080681 cgtgtgagacttggtctccgtgtgcgggaatctcggagca 21080642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 256 - 310
Target Start/End: Complemental strand, 7482271 - 7482217
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagtataattttt 310  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| ||||||||||||    
T  7482271 acttttgttgacctaaatttctcttataaataggaccggaggtagtataattttt 7482217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 179 - 302
Target Start/End: Original strand, 7269412 - 7269535
Alignment:
Q  179 tccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctc 278  Q
    ||||||||||||||||||||||| || |||||||||||||  ||| || |||    || ||     |||||||||||| ||||||||||||||  || ||    
T  7269412 tccggtcctatttataagagaaagttgggttaacaaaagttgatgcatctggttaaaaattcagtttagatacatcaatttttgttgacccaactttttc 7269511  T
Q  279 taataaataggaccggagggagta 302  Q
    | ||||||| ||||||||||||||    
T  7269512 ttataaataagaccggagggagta 7269535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 256 - 303
Target Start/End: Complemental strand, 22285745 - 22285698
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagtat 303  Q
    ||||||||||||| ||| |||||| |||||||||||||||||||||||    
T  22285745 acttttgttgacctaaatttctcttataaataggaccggagggagtat 22285698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 9268890 - 9268840
Alignment:
Q  168 tatatactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    |||||||| |||||||||||||||||||||||| ||| ||| |||||||||    
T  9268890 tatatactccctccggtcctatttataagagaattttgggtcaacaaaagt 9268840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 36016280 - 36016326
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagta 302  Q
    ||||||||||||| ||| |||||| ||||||||||||||||||||||    
T  36016280 acttttgttgacctaaatttctcttataaataggaccggagggagta 36016326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 303
Target Start/End: Original strand, 1738446 - 1738578
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    ||||| |||||||||||||||||||||||| ||| ||| |||||||||  |||||| | |    || ||    | | ||||||  ||||||||||||| |    
T  1738446 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 1738545  T
Q  271 aaattctctaataaataggaccggagggagtat 303  Q
    || |||||| ||||||||||||||||| |||||    
T  1738546 aatttctcttataaataggaccggaggtagtat 1738578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 303
Target Start/End: Complemental strand, 7240880 - 7240748
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    ||||| |||||||||||||||||||||||| ||| ||| |||||||||  |||||| | |    || ||    | | ||||||  ||||||||||||| |    
T  7240880 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 7240781  T
Q  271 aaattctctaataaataggaccggagggagtat 303  Q
    || |||||| ||||||||||||||||| |||||    
T  7240780 aatttctcttataaataggaccggaggtagtat 7240748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 256 - 304
Target Start/End: Original strand, 38063997 - 38064045
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagtata 304  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| ||||||    
T  38063997 acttttgttgacctaaatttctcttataaataggaccggaggtagtata 38064045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 256 - 303
Target Start/End: Original strand, 1565813 - 1565860
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagtat 303  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| |||||    
T  1565813 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 1565860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 226
Target Start/End: Complemental strand, 7482356 - 7482301
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtat 226  Q
    ||||| |||||||||||||||||||||||| ||| ||| |||||||||  ||||||    
T  7482356 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtat 7482301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 268
Target Start/End: Original strand, 14706705 - 14706792
Alignment:
Q  182 ggtcctatttataagagaaat-ttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacc 268  Q
    |||| ||||||||||| |||  ||||||||||||||||  |||||| || | |||||| ||||  ||||| |||||||||||||||||    
T  14706705 ggtcttatttataagaaaaaaattaggttaacaaaagttgatgtatctgaattgaattgttaatcagatatatcaacttttgttgacc 14706792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 256 - 303
Target Start/End: Original strand, 28536835 - 28536882
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagtat 303  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| |||||    
T  28536835 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 28536882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 244 - 295
Target Start/End: Complemental strand, 29993302 - 29993251
Alignment:
Q  244 ctagatacatcaacttttgttgacccaaaattctctaataaataggaccgga 295  Q
    ||||||| || ||||||||||||||||| ||||||| | |||||||||||||    
T  29993302 ctagatatattaacttttgttgacccaacattctcttacaaataggaccgga 29993251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 303
Target Start/End: Complemental strand, 46840990 - 46840859
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    |||| |||||||||||||||||||||||| ||| ||| |||||||||  |||||| | |    || ||    | | ||||||  ||||||||||||| ||    
T  46840990 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 46840891  T
Q  272 aattctctaataaataggaccggagggagtat 303  Q
    | |||||| ||||||||||||||||| |||||    
T  46840890 atttctcttataaataggaccggaggtagtat 46840859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 22285829 - 22285775
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtat 226  Q
    |||| |||||||||||||||||||||||| ||| ||| |||||||||  ||||||    
T  22285829 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtat 22285775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 23314139 - 23314185
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    |||| |||||||||||||||||||||||| ||| ||| |||||||||    
T  23314139 tactccctccggtcctatttataagagaattttgggtcaacaaaagt 23314185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 23314223 - 23314269
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagta 302  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| ||||    
T  23314223 acttttgttgacctaaatttctcttataaataggaccggaggtagta 23314269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 31319483 - 31319529
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagta 302  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| ||||    
T  31319483 acttttgttgacctaaatttctcttataaataggaccggaggtagta 31319529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 256 - 302
Target Start/End: Complemental strand, 36583441 - 36583395
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagta 302  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| ||||    
T  36583441 acttttgttgacctaaatttctcttataaataggaccggaggtagta 36583395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 38441590 - 38441544
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    |||| |||||||||||||||||||||||| ||| ||| |||||||||    
T  38441590 tacttcctccggtcctatttataagagaattttgggtcaacaaaagt 38441544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 247 - 301
Target Start/End: Original strand, 46877665 - 46877719
Alignment:
Q  247 gatacatcaacttttgttgacccaaaattctctaataaataggaccggagggagt 301  Q
    ||||||| |||||||||||||||||  |||||| ||| ||||||||||| |||||    
T  46877665 gatacattaacttttgttgacccaactttctcttatatataggaccggatggagt 46877719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 199; Significance: 1e-108; HSPs: 73)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 301 - 540
Target Start/End: Original strand, 3585213 - 3585452
Alignment:
Q  301 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgt 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||    
T  3585213 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagggcacaccctcggaagtgatatcccacatatataaacactactagagtgt 3585312  T
Q  401 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagt 500  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3585313 gtgatctacccaatgtgggacataaaattttcaattcacattttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagt 3585412  T
Q  501 atactccaagnnnnnnncattatacactagtgttccaaca 540  Q
    ||||||||||       || ||||||||||||||||||||    
T  3585413 atactccaagttttttccaatatacactagtgttccaaca 3585452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 172; E-Value: 6e-92
Query Start/End: Original strand, 320 - 540
Target Start/End: Original strand, 5730702 - 5730922
Alignment:
Q  320 tcactccgttcacaaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtggg 419  Q
    |||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5730702 tcactccgttcacaaaagtgtgtaccccaagggcacacccttgggagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtggg 5730801  T
Q  420 acataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagtatactccaagnnnnnnnca 519  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||        ||    
T  5730802 acataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggtttcacaaaccaactagtatactccaaattttttcca 5730901  T
Q  520 ttatacactagtgttccaaca 540  Q
    |||||||||||||||| ||||    
T  5730902 ttatacactagtgttctaaca 5730922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 301 - 510
Target Start/End: Complemental strand, 48246207 - 48245998
Alignment:
Q  301 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgt 400  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  48246207 tataatttttggctagcgctcactccgttcacaaaagtgggtaccccaagggcacacccttggaagtgatatcgcacatatataaacactactagagtgt 48246108  T
Q  401 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagt 500  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| | ||||||||    
T  48246107 gtgatctacccaatgtgggacataaaaattttaattcacactttacactagtttctacatccttgtgtttacattccaaagtctccacataacaactagt 48246008  T
Q  501 atactccaag 510  Q
    ||||||||||    
T  48246007 atactccaag 48245998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 137; E-Value: 5e-71
Query Start/End: Original strand, 384 - 541
Target Start/End: Original strand, 5725360 - 5725517
Alignment:
Q  384 aaacactactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggc 483  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5725360 aaacactactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggc 5725459  T
Q  484 tccacaaaccaactagtatactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    |||||||||||||||||||||||||||       ||||||||||||||||||||||||    
T  5725460 tccacaaaccaactagtatactccaagttttttccattatacactagtgttccaacaa 5725517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 168 - 309
Target Start/End: Original strand, 9981643 - 9981784
Alignment:
Q  168 tatatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgac 267  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9981643 tatatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgac 9981742  T
Q  268 ccaaaattctctaataaataggaccggagggagtataatttt 309  Q
    |||||||||||| ||||||||||||||||||| ||| |||||    
T  9981743 ccaaaattctcttataaataggaccggagggaatattatttt 9981784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 171 - 302
Target Start/End: Complemental strand, 27159489 - 27159358
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27159489 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 27159390  T
Q  271 aaattctctaataaataggaccggagggagta 302  Q
    ||||||||| ||||||||||||||||||||||    
T  27159389 aaattctcttataaataggaccggagggagta 27159358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 171 - 302
Target Start/End: Complemental strand, 44668224 - 44668093
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44668224 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 44668125  T
Q  271 aaattctctaataaataggaccggagggagta 302  Q
    ||||||||| ||||||||||||||||||||||    
T  44668124 aaattctcttataaataggaccggagggagta 44668093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 172 - 302
Target Start/End: Complemental strand, 31842925 - 31842795
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31842925 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 31842826  T
Q  272 aattctctaataaataggaccggagggagta 302  Q
    |||||||| ||||||||||||||||||||||    
T  31842825 aattctcttataaataggaccggagggagta 31842795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 172 - 302
Target Start/End: Complemental strand, 39402096 - 39401966
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39402096 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 39401997  T
Q  272 aattctctaataaataggaccggagggagta 302  Q
    |||||||| ||||||||||||||||||||||    
T  39401996 aattctcttataaataggaccggagggagta 39401966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 172 - 305
Target Start/End: Complemental strand, 47216829 - 47216696
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47216829 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 47216730  T
Q  272 aattctctaataaataggaccggagggagtataa 305  Q
    |||||||| |||||||| ||||||||||||||||    
T  47216729 aattctcttataaatagtaccggagggagtataa 47216696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 171 - 303
Target Start/End: Original strand, 14984836 - 14984968
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14984836 atactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 14984935  T
Q  271 aaattctctaataaataggaccggagggagtat 303  Q
    ||||||||| |||||||||||||||||||||||    
T  14984936 aaattctcttataaataggaccggagggagtat 14984968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 171 - 302
Target Start/End: Original strand, 11795932 - 11796063
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  11795932 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgcatttggactgaatttttaactagatacatcaacttttgttgaccca 11796031  T
Q  271 aaattctctaataaataggaccggagggagta 302  Q
    ||||||||| ||||||||||||||||||||||    
T  11796032 aaattctcttataaataggaccggagggagta 11796063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 171 - 302
Target Start/End: Complemental strand, 26471196 - 26471065
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  26471196 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgatcca 26471097  T
Q  271 aaattctctaataaataggaccggagggagta 302  Q
    ||||||||| ||||||||||||||||||||||    
T  26471096 aaattctcttataaataggaccggagggagta 26471065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 389 - 541
Target Start/End: Original strand, 27711689 - 27711841
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27711689 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 27711788  T
Q  489 aaaccaactagtatactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    ||||  ||||||||||||||||       ||||||||||||||||||||||||    
T  27711789 aaactcactagtatactccaagtttttttcattatacactagtgttccaacaa 27711841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 170 - 303
Target Start/End: Original strand, 34042694 - 34042827
Alignment:
Q  170 tatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccc 269  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34042694 tatactacctccggtcctatttataagagaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccc 34042793  T
Q  270 aaaattctctaataaataggaccggagggagtat 303  Q
    |||||||||| |||||||| ||||||||||||||    
T  34042794 aaaattctcttataaatagaaccggagggagtat 34042827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 172 - 303
Target Start/End: Original strand, 1050888 - 1051019
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  1050888 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgcatttggactgaatttttaactagatacatcaactttagttgacccaa 1050987  T
Q  272 aattctctaataaataggaccggagggagtat 303  Q
    |||||||| |||||||||||||||||||||||    
T  1050988 aattctcttataaataggaccggagggagtat 1051019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 172 - 302
Target Start/End: Complemental strand, 47777611 - 47777481
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  47777611 tactacccccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaattttgaactagatacatcaacttttgttgacccaa 47777512  T
Q  272 aattctctaataaataggaccggagggagta 302  Q
    |||||||| ||||||||||||||||||||||    
T  47777511 aattctcttataaataggaccggagggagta 47777481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 171 - 303
Target Start/End: Complemental strand, 12483759 - 12483627
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||    
T  12483759 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttagactgaattttgaactaaatacatcaacttttgttgaccca 12483660  T
Q  271 aaattctctaataaataggaccggagggagtat 303  Q
    ||||||||| |||||||||||||||||||||||    
T  12483659 aaattctcttataaataggaccggagggagtat 12483627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 389 - 541
Target Start/End: Complemental strand, 37404147 - 37403994
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37404147 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 37404048  T
Q  489 aaaccaactagtatactccaag-nnnnnnncattatacactagtgttccaacaa 541  Q
    ||||  ||||||||||||||||        ||||||||||||||||||||||||    
T  37404047 aaactcactagtatactccaagttttttttcattatacactagtgttccaacaa 37403994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 390 - 541
Target Start/End: Complemental strand, 37409265 - 37409113
Alignment:
Q  390 tactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccaca 489  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37409265 tactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccaca 37409166  T
Q  490 aaccaactagtatactccaag-nnnnnnncattatacactagtgttccaacaa 541  Q
    |||  ||||||||||||||||        ||||||||||||||||||||||||    
T  37409165 aactcactagtatactccaagttttttttcattatacactagtgttccaacaa 37409113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 389 - 510
Target Start/End: Complemental strand, 34317961 - 34317840
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34317961 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 34317862  T
Q  489 aaaccaactagtatactccaag 510  Q
    ||||  ||||||||||||||||    
T  34317861 aaactcactagtatactccaag 34317840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 389 - 510
Target Start/End: Complemental strand, 36684391 - 36684270
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36684391 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 36684292  T
Q  489 aaaccaactagtatactccaag 510  Q
    ||||  ||||||||||||||||    
T  36684291 aaactcactagtatactccaag 36684270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 172 - 296
Target Start/End: Complemental strand, 44955336 - 44955212
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  44955336 tactacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacctaa 44955237  T
Q  272 aattctctaataaataggaccggag 296  Q
    |||||||| ||||||||||||||||    
T  44955236 aattctcttataaataggaccggag 44955212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 171 - 304
Target Start/End: Original strand, 25694318 - 25694451
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    ||||| |||| | ||||||||||||||||||||||| | || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  25694318 atactccctctgatcctatttataagagaaatttagatcaataaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgaccca 25694417  T
Q  271 aaattctctaataaataggaccggagggagtata 304  Q
    ||||||||| ||||||||||||||||||||||||    
T  25694418 aaattctcttataaataggaccggagggagtata 25694451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 171 - 303
Target Start/End: Complemental strand, 47588468 - 47588336
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  47588468 atactacctctggtcttatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaattagatacatcaacttttgttgaccca 47588369  T
Q  271 aaattctctaataaataggaccggagggagtat 303  Q
    ||||||||| |||||||  |||| |||||||||    
T  47588368 aaattctcttataaataaaaccgaagggagtat 47588336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 172 - 279
Target Start/End: Complemental strand, 23278131 - 23278024
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23278131 tactacctccggtcctatttataagagaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 23278032  T
Q  272 aattctct 279  Q
    ||||||||    
T  23278031 aattctct 23278024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 389 - 539
Target Start/End: Complemental strand, 11250852 - 11250701
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  11250852 ctactagagtgtgtgatctaaccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaagactccac 11250753  T
Q  489 aaaccaactagtatactccaag-nnnnnnncattatacactagtgttccaac 539  Q
    ||||  ||| ||||||||||||        ||||||||||||||||||||||    
T  11250752 aaactcactggtatactccaagtttttttccattatacactagtgttccaac 11250701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 389 - 541
Target Start/End: Original strand, 27716809 - 27716963
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  27716809 ctactagagtgtgtgatctacccgatgtgggacataaaaatttcaattcacactttacactagtttctccatccttgtgcttacgttccaaaggctccac 27716908  T
Q  489 aaaccaactagtatactccaag--nnnnnnncattatacactagtgttccaacaa 541  Q
    ||||  ||||||||||||||||         ||||||||||||||||||||||||    
T  27716909 aaactcactagtatactccaagttttttttccattatacactagtgttccaacaa 27716963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 169 - 303
Target Start/End: Original strand, 17556749 - 17556884
Alignment:
Q  169 atatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaa-tgtatttggactgaatttttaactagatacatcaacttttgttgac 267  Q
    ||||||| |||| |||||||||||||||||||| |||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  17556749 atatactccctctggtcctatttataagagaaagttaggtcaacaaaagttaaatgtatttggactgaatttttaactagatacatcaacttttgttgac 17556848  T
Q  268 ccaaaattctctaataaataggaccggagggagtat 303  Q
    ||||  |||||| |||||||||||||||||||||||    
T  17556849 ccaagtttctcttataaataggaccggagggagtat 17556884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 178 - 310
Target Start/End: Original strand, 47969700 - 47969833
Alignment:
Q  178 ctccggtcctatttataa-gagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattc 276  Q
    |||||||||||||||||| ||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||     
T  47969700 ctccggtcctatttataaagagaaatttaggtcaacaaaagtaaatgtatttagactgaatttttaactagatacatcaacttttgttgatccaaaatta 47969799  T
Q  277 tctaataaataggaccggagggagtataattttt 310  Q
    | | ||||||||||||||||||||||| ||||||    
T  47969800 ttttataaataggaccggagggagtattattttt 47969833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 171 - 303
Target Start/End: Original strand, 11897053 - 11897185
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    ||||| ||||||||||||||||||||||||| |||||| |||||||||  |||||| || ||||||||||||||  ||||||||||||||||||||||||    
T  11897053 atactccctccggtcctatttataagagaaagttaggtcaacaaaagttgatgtatctgaactgaatttttaaccggatacatcaacttttgttgaccca 11897152  T
Q  271 aaattctctaataaataggaccggagggagtat 303  Q
    || |||||| |||||||||||||||||||||||    
T  11897153 aatttctcttataaataggaccggagggagtat 11897185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 170 - 302
Target Start/End: Complemental strand, 16448240 - 16448108
Alignment:
Q  170 tatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccc 269  Q
    |||||| ||||||||||||||||||||||||| || ||| |||||||||  |||||| ||||||||||||| ||| |||||||| |||||||||||||||    
T  16448240 tatactccctccggtcctatttataagagaaagttgggtcaacaaaagttgatgtatctggactgaattttgaaccagatacataaacttttgttgaccc 16448141  T
Q  270 aaaattctctaataaataggaccggagggagta 302  Q
    || |||| |  ||||||| |||||||| |||||    
T  16448140 aatattcccctataaataagaccggagtgagta 16448108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 172 - 305
Target Start/End: Original strand, 37552141 - 37552274
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    |||| ||||||||||||||||||||| ||| ||  || ||||| |||  |||||| ||||||||||||||||| ||||||||  | ||||||||||||||    
T  37552141 tactccctccggtcctatttataagataaagttgagtcaacaacagttcatgtatctggactgaatttttaaccagatacattcatttttgttgacccaa 37552240  T
Q  272 aattctctaataaataggaccggagggagtataa 305  Q
    | |||||| |||||||||||||| ||||||||||    
T  37552241 atttctcttataaataggaccggggggagtataa 37552274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 169 - 292
Target Start/End: Complemental strand, 12213607 - 12213484
Alignment:
Q  169 atatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacc 268  Q
    ||||||| ||||| ||| ||||||||||||||  |||||| ||||||| | ||||||||| || |||||||||||||| ||| ||||| |||||||||||    
T  12213607 atatactccctccagtcttatttataagagaatgttaggtcaacaaaaattaatgtatttagattgaatttttaactaaataaatcaatttttgttgacc 12213508  T
Q  269 caaaattctctaataaataggacc 292  Q
    |||  |||||||||||||||||||    
T  12213507 caagtttctctaataaataggacc 12213484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 187 - 302
Target Start/End: Original strand, 11989796 - 11989911
Alignment:
Q  187 tatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctctaataaat 286  Q
    ||||||||||||||| || ||| |||||||   ||| ||||||||||||||||||||| | ||||||||| |||| ||||| |||| |||| | ||||||    
T  11989796 tatttataagagaaagttgggtcaacaaaaactaatatatttggactgaatttttaaccaaatacatcaatttttattgactcaaatttcttttataaat 11989895  T
Q  287 aggaccggagggagta 302  Q
    ||||||||||||||||    
T  11989896 aggaccggagggagta 11989911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 246 - 305
Target Start/End: Original strand, 16448182 - 16448241
Alignment:
Q  246 agatacatcaacttttgttgacccaaaattctctaataaataggaccggagggagtataa 305  Q
    ||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||    
T  16448182 agatacatcaacttttgttgacccaactttctcttataaataggaccggagggagtataa 16448241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 451 - 510
Target Start/End: Complemental strand, 50959069 - 50959010
Alignment:
Q  451 gtttctccatccttgtgtttacattccaaaggctccacaaaccaactagtatactccaag 510  Q
    |||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||    
T  50959069 gtttctccattcttgtgtttacattccaaaggctccacaaactcactagtatactccaag 50959010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 171 - 308
Target Start/End: Complemental strand, 11897185 - 11897048
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaact-agatacatcaacttttgttgaccc 269  Q
    ||||| |||||||||||||||||||||||||||| ||| |||||||||  ||||||  ||  | ||  || |  | |||||||||||||||||||||||     
T  11897185 atactccctccggtcctatttataagagaaatttgggtcaacaaaagttgatgtatccggt-taaaaattcagttcagatacatcaacttttgttgacct 11897087  T
Q  270 aaaattctctaataaataggaccggagggagtataattt 308  Q
    ||  |||||| ||||||||||||||||||||||| ||||    
T  11897086 aactttctcttataaataggaccggagggagtatcattt 11897048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 171 - 303
Target Start/End: Original strand, 12483627 - 12483759
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    ||||| |||||||||||||||||||||||| ||| ||| |||||||||  |||||||| |    || ||    ||| ||||||  ||||||||||||| |    
T  12483627 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatttagttcaaaattcagtctaaatacattcacttttgttgaccta 12483726  T
Q  271 aaattctctaataaataggaccggagggagtat 303  Q
    || |||||| ||||||||||||||||| |||||    
T  12483727 aatttctcttataaataggaccggaggtagtat 12483759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 302
Target Start/End: Complemental strand, 37552273 - 37552141
Alignment:
Q  170 tatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccc 269  Q
    |||||| || ||||||||||||||||||||||||| ||| ||||||| ||||||||| |||    || ||    | |||||||| |||| |||||||| |    
T  37552273 tatactccccccggtcctatttataagagaaatttgggtcaacaaaaatgaatgtatctggttaaaaattcagtccagatacatgaactgttgttgactc 37552174  T
Q  270 aaaattctctaataaataggaccggagggagta 302  Q
    ||  || ||| ||||||||||||||||||||||    
T  37552173 aactttatcttataaataggaccggagggagta 37552141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 288
Target Start/End: Original strand, 12047117 - 12047223
Alignment:
Q  183 gtcctatttataagagaaatttaggttaac-aaaagtgaatgtatttggactgaa-tttttaactagatacatcaacttttgttgacccaaaattctcta 280  Q
    ||||||||||||||||||| ||  |||||| ||||||| |||||||| ||||||| ||||||||| ||||||||||  ||| |||| ||||| ||||||     
T  12047117 gtcctatttataagagaaagttgagttaacaaaaagtg-atgtatttagactgaattttttaactggatacatcaatctttattgatccaaatttctctt 12047215  T
Q  281 ataaatag 288  Q
    ||||||||    
T  12047216 ataaatag 12047223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 5730569 - 5730609
Alignment:
Q  32 acgtgtgagacttggtctccgtgtgcgggaatctcggagca 72  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  5730569 acgtgtgagacttggtctctgtgtgcgggaatctcggagca 5730609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 295
Target Start/End: Original strand, 12043616 - 12043726
Alignment:
Q  184 tcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctctaata 283  Q
    |||||||||||| ||| ||||| || |||||||||  ||||||||| | | |||||||||| |||||||| || |||||||||   ||| || ||| |||    
T  12043616 tcctatttataaaagatatttaagtcaacaaaagttgatgtatttg-attcaatttttaacaagatacattaatttttgttgatttaaatttttcttata 12043714  T
Q  284 aataggaccgga 295  Q
    ||||||||||||    
T  12043715 aataggaccgga 12043726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 221 - 295
Target Start/End: Complemental strand, 1598461 - 1598389
Alignment:
Q  221 atgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctctaataaataggaccgga 295  Q
    |||||||||||||||||||||||| | ||||||||| ||||||||| ||| | |||||| |||||||||| ||||    
T  1598461 atgtatttggactgaatttttaac-atatacatcaatttttgttga-ccatatttctcttataaataggatcgga 1598389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 25694452 - 25694403
Alignment:
Q  169 atatactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    ||||||| |||||||||||||||||||||||| ||| ||| |||||||||    
T  25694452 atatactccctccggtcctatttataagagaattttgggtcaacaaaagt 25694403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 39720817 - 39720776
Alignment:
Q  170 tatactacctccggtcctatttataagagaaatttaggttaa 211  Q
    |||||||||||||||||||||||||||||| | |||||||||    
T  39720817 tatactacctccggtcctatttataagagacaattaggttaa 39720776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 256 - 304
Target Start/End: Complemental strand, 9981693 - 9981645
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagtata 304  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| ||||||    
T  9981693 acttttgttgacctaaatttctcttataaataggaccggaggtagtata 9981645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 261
Target Start/End: Original strand, 12069499 - 12069575
Alignment:
Q  185 cctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaactttt 261  Q
    ||||||||| ||||||| ||  |||||||||| |  |||||||| |||||||||||||||  |||| ||||||||||    
T  12069499 cctatttatgagagaaagttgagttaacaaaaatttatgtatttagactgaatttttaacctgataaatcaactttt 12069575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 218
Target Start/End: Original strand, 44955212 - 44955252
Alignment:
Q  178 ctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    ||||||||||||||||||||||| ||||||| |||||||||    
T  44955212 ctccggtcctatttataagagaattttaggtcaacaaaagt 44955252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 256 - 303
Target Start/End: Complemental strand, 11795979 - 11795932
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagtat 303  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| |||||    
T  11795979 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 11795932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 218
Target Start/End: Complemental strand, 14984968 - 14984921
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    ||||| |||||||||||||||||||||||| ||| ||| |||||||||    
T  14984968 atactccctccggtcctatttataagagaattttgggtcaacaaaagt 14984921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 218
Target Start/End: Complemental strand, 17556884 - 17556837
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    ||||| ||||||||||||||||||||||||| || ||| |||||||||    
T  17556884 atactccctccggtcctatttataagagaaacttgggtcaacaaaagt 17556837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 256 - 303
Target Start/End: Original strand, 26471149 - 26471196
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagtat 303  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| |||||    
T  26471149 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 26471196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 256 - 303
Target Start/End: Original strand, 27159442 - 27159489
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagtat 303  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| |||||    
T  27159442 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 27159489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 258 - 309
Target Start/End: Complemental strand, 34042740 - 34042689
Alignment:
Q  258 ttttgttgacccaaaattctctaataaataggaccggagggagtataatttt 309  Q
    ||||||||||| ||| |||||| ||||||||||||||||| |||||| ||||    
T  34042740 ttttgttgacctaaatttctcttataaataggaccggaggtagtatagtttt 34042689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 256 - 303
Target Start/End: Original strand, 44668177 - 44668224
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagtat 303  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| |||||    
T  44668177 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 44668224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 205
Target Start/End: Complemental strand, 47678406 - 47678371
Alignment:
Q  170 tatactacctccggtcctatttataagagaaattta 205  Q
    |||||||||||||||||||||||||||| |||||||    
T  47678406 tatactacctccggtcctatttataagaaaaattta 47678371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 221 - 287
Target Start/End: Original strand, 571556 - 571622
Alignment:
Q  221 atgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctctaataaata 287  Q
    |||||||| ||||||||||| |||||| ||||| |||||||||||| | || ||||||  |||||||    
T  571556 atgtatttagactgaattttgaactaggtacattaacttttgttgatcaaatattctcctataaata 571622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 256 - 302
Target Start/End: Complemental strand, 1050934 - 1050888
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagta 302  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| ||||    
T  1050934 acttttgttgacctaaatttctcttataaataggaccggaggtagta 1050888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 11796063 - 11796017
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    |||| |||||||||||||||||||||||| ||| ||| |||||||||    
T  11796063 tactccctccggtcctatttataagagaattttgggtcaacaaaagt 11796017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 27159358 - 27159404
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    |||| |||||||||||||||||||||||| ||| ||| |||||||||    
T  27159358 tactccctccggtcctatttataagagaattttgggtcaacaaaagt 27159404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 31842795 - 31842841
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    |||| |||||||||||||||||||||||| ||| ||| |||||||||    
T  31842795 tactccctccggtcctatttataagagaattttgggtcaacaaaagt 31842841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 31842879 - 31842925
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagta 302  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| ||||    
T  31842879 acttttgttgacctaaatttctcttataaataggaccggaggtagta 31842925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 39401966 - 39402012
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    |||| |||||||||||||||||||||||| ||| ||| |||||||||    
T  39401966 tactccctccggtcctatttataagagaattttgggtcaacaaaagt 39402012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 39402050 - 39402096
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagta 302  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| ||||    
T  39402050 acttttgttgacctaaatttctcttataaataggaccggaggtagta 39402096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 44668093 - 44668139
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    |||| |||||||||||||||||||||||| ||| ||| |||||||||    
T  44668093 tactccctccggtcctatttataagagaattttgggtcaacaaaagt 44668139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 47216783 - 47216829
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagta 302  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| ||||    
T  47216783 acttttgttgacctaaatttctcttataaataggaccggaggtagta 47216829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 47777481 - 47777527
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    |||| |||||||||||||||||||||||| ||| ||| |||||||||    
T  47777481 tactccctccggtcctatttataagagaattttgggtcaacaaaagt 47777527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 9981772 - 9981723
Alignment:
Q  177 cctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtat 226  Q
    |||||||||||||||||||||||| ||| ||| |||||||||  ||||||    
T  9981772 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtat 9981723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 264
Target Start/End: Original strand, 11774536 - 11774605
Alignment:
Q  195 agagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgtt 264  Q
    ||||||| |||||| ||||||| |  ||||| ||  |||||||||| |||||||||| ||||||||||||    
T  11774536 agagaaagttaggtcaacaaaaattgatgtaattaaactgaattttgaactagatacgtcaacttttgtt 11774605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 255 - 304
Target Start/End: Complemental strand, 17556799 - 17556750
Alignment:
Q  255 aacttttgttgacccaaaattctctaataaataggaccggagggagtata 304  Q
    |||||||||||||| ||  |||||| |||||||||||| |||||||||||    
T  17556799 aacttttgttgacctaactttctcttataaataggaccagagggagtata 17556750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 246 - 303
Target Start/End: Original strand, 21537943 - 21538000
Alignment:
Q  246 agatacatcaacttttgttgacccaaaattctctaataaataggaccggagggagtat 303  Q
    |||||||||||||||||||||| |||  |||||| ||||||| || ||||| ||||||    
T  21537943 agatacatcaacttttgttgactcaattttctcttataaataagatcggagagagtat 21538000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 258 - 307
Target Start/End: Original strand, 23278087 - 23278136
Alignment:
Q  258 ttttgttgacccaaaattctctaataaataggaccggagggagtataatt 307  Q
    ||||||||||| ||| |||||| ||||||||||||||||| |||| ||||    
T  23278087 ttttgttgacctaaatttctcttataaataggaccggaggtagtacaatt 23278136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 196; Significance: 1e-106; HSPs: 57)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 301 - 541
Target Start/End: Complemental strand, 2817636 - 2817396
Alignment:
Q  301 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgt 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2817636 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgt 2817537  T
Q  401 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagt 500  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  2817536 gtgatctacccaatgtgggacattaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacataacaactagt 2817437  T
Q  501 atactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    ||||||||||       || |||||||||||||||||||||    
T  2817436 atactccaagtttttgccaatatacactagtgttccaacaa 2817396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 180; E-Value: 1e-96
Query Start/End: Original strand, 301 - 541
Target Start/End: Original strand, 34142693 - 34142933
Alignment:
Q  301 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgt 400  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||    
T  34142693 tataatttttggctagcgctcactccgttcacaaaagtgggtaccccaagggcacacccttggaagtgatttcccacatatataaacactactagagtgt 34142792  T
Q  401 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagt 500  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| | ||||||||    
T  34142793 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctacatccttgtgtttacattccaaagtctccacataacaactagt 34142892  T
Q  501 atactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    ||||||||||       || |||||||||||||||||||||    
T  34142893 atactccaagtttttgccaatatacactagtgttccaacaa 34142933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 180; E-Value: 1e-96
Query Start/End: Original strand, 301 - 541
Target Start/End: Original strand, 34155309 - 34155549
Alignment:
Q  301 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgt 400  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||    
T  34155309 tataatttttggctagcgctcactccgttcacaaaagtgggtaccccaagggcacacccttggaagtgatttcccacatatataaacactactagagtgt 34155408  T
Q  401 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagt 500  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| | ||||||||    
T  34155409 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctacatccttgtgtttacattccaaagtctccacataacaactagt 34155508  T
Q  501 atactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    ||||||||||       || |||||||||||||||||||||    
T  34155509 atactccaagtttttgccaatatacactagtgttccaacaa 34155549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 301 - 540
Target Start/End: Original strand, 34376376 - 34376615
Alignment:
Q  301 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgt 400  Q
    ||||||||||||| || |||||||||||||||||||||| ||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||    
T  34376376 tataatttttggctagtgctcactccgttcacaaaagtgggtaccccaagggcacacccttggaagtgatttcccacatatataaacactactagagtgt 34376475  T
Q  401 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagt 500  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| | |||| || | ||||||||    
T  34376476 gttatctacccaatgtgggacataaaattttcaattcacactttacactagtttctacatcattgtgtttacattccaatgtctcctcataacaactagt 34376575  T
Q  501 atactccaagnnnnnnncattatacactagtgttccaaca 540  Q
    ||||||||||       || ||||||||||||||||||||    
T  34376576 atactccaagtttttgccaatatacactagtgttccaaca 34376615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 155; E-Value: 8e-82
Query Start/End: Original strand, 301 - 540
Target Start/End: Complemental strand, 6728012 - 6727773
Alignment:
Q  301 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgt 400  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||  |||||  ||||||||||| |||||||||||||||||||||||||||||    
T  6728012 tataatttttggctagcgctcactccgttcacaaaagtgggtaccccaagggcacacatttggaagtgatttcccacatatataaacactactagagtgt 6727913  T
Q  401 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagt 500  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| | |||| || | ||||||||    
T  6727912 gtgatctacccaatgtggaacataaaattttcaattcacactttacactagtttctacatcattgtgtttacattccaatgtctcctcataacaactagt 6727813  T
Q  501 atactccaagnnnnnnncattatacactagtgttccaaca 540  Q
    ||||||||||       || ||||||||||||||||||||    
T  6727812 atactccaagtttttgccaatatacactagtgttccaaca 6727773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 301 - 541
Target Start/End: Complemental strand, 24190890 - 24190649
Alignment:
Q  301 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgt 400  Q
    ||||||||||||| |||||||||||||||| |||||||| ||||||||||   ||||||||||||||||| |||||||||||||||||||||||||||||    
T  24190890 tataatttttggctagcgctcactccgttcccaaaagtgggtaccccaaggggacacccttggaagtgatttcccacatatataaacactactagagtgt 24190791  T
Q  401 gtgatctacccaatgtgggacat-aaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactag 499  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| | |||| || | |||||||    
T  24190790 gtgatctacccaatgtgggacataaaaattttcaattcacactttacactagtttctacatcattgtgtttacattccaatgtctcctcataacaactag 24190691  T
Q  500 tatactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    |||||||||||       || |||||||||||||||||||||    
T  24190690 tatactccaagtttttgccaatatacactagtgttccaacaa 24190649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 170 - 304
Target Start/End: Complemental strand, 11572277 - 11572143
Alignment:
Q  170 tatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccc 269  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11572277 tatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccc 11572178  T
Q  270 aaaattctctaataaataggaccggagggagtata 304  Q
    |||||||||| ||||||||||||||||||||||||    
T  11572177 aaaattctcttataaataggaccggagggagtata 11572143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 169 - 302
Target Start/End: Original strand, 2830332 - 2830465
Alignment:
Q  169 atatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacc 268  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2830332 atatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacc 2830431  T
Q  269 caaaattctctaataaataggaccggagggagta 302  Q
    ||||||||||| ||||||||||||||||||||||    
T  2830432 caaaattctcttataaataggaccggagggagta 2830465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 125; E-Value: 7e-64
Query Start/End: Original strand, 172 - 304
Target Start/End: Original strand, 6330115 - 6330247
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6330115 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 6330214  T
Q  272 aattctctaataaataggaccggagggagtata 304  Q
    |||||||| ||||||||||||||||||||||||    
T  6330215 aattctcttataaataggaccggagggagtata 6330247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 171 - 302
Target Start/End: Complemental strand, 8383100 - 8382969
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8383100 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 8383001  T
Q  271 aaattctctaataaataggaccggagggagta 302  Q
    ||||||||| ||||||||||||||||||||||    
T  8383000 aaattctcttataaataggaccggagggagta 8382969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 172 - 303
Target Start/End: Original strand, 26602323 - 26602454
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26602323 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 26602422  T
Q  272 aattctctaataaataggaccggagggagtat 303  Q
    |||||||| |||||||||||||||||||||||    
T  26602423 aattctcttataaataggaccggagggagtat 26602454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 171 - 305
Target Start/End: Complemental strand, 13853724 - 13853590
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13853724 atactaccttcggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 13853625  T
Q  271 aaattctctaataaataggaccggagggagtataa 305  Q
    ||||||||| |||||||||||||||||||||||||    
T  13853624 aaattctcttataaataggaccggagggagtataa 13853590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 170 - 303
Target Start/End: Original strand, 8099528 - 8099661
Alignment:
Q  170 tatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccc 269  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  8099528 tatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgaccc 8099627  T
Q  270 aaaattctctaataaataggaccggagggagtat 303  Q
    |||||||||| |||||||||||||||||||||||    
T  8099628 aaaattctcttataaataggaccggagggagtat 8099661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 389 - 541
Target Start/End: Complemental strand, 22703095 - 22702943
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22703095 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 22702996  T
Q  489 aaaccaactagtatactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    ||||  ||||||||||||||||       ||||||||||||||||||||||||    
T  22702995 aaactcactagtatactccaagtttttttcattatacactagtgttccaacaa 22702943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 389 - 540
Target Start/End: Complemental strand, 22697919 - 22697768
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22697919 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 22697820  T
Q  489 aaaccaactagtatactccaagnnnnnnncattatacactagtgttccaaca 540  Q
    ||||  ||||||||||||||||       |||||||||||||||||||||||    
T  22697819 aaactcactagtatactccaagtttttttcattatacactagtgttccaaca 22697768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 171 - 303
Target Start/End: Complemental strand, 33052925 - 33052793
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  33052925 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttattgaccca 33052826  T
Q  271 aaattctctaataaataggaccggagggagtat 303  Q
    ||||||||| ||||||||||||||| |||||||    
T  33052825 aaattctcttataaataggaccggatggagtat 33052793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 172 - 303
Target Start/End: Original strand, 9644696 - 9644827
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    ||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9644696 tactacctccggtcctatttataagagaaatttaggtcaacataaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 9644795  T
Q  272 aattctctaataaataggaccggagggagtat 303  Q
    |||||||| |||||||||||||||||||||||    
T  9644796 aattctcttataaataggaccggagggagtat 9644827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 172 - 303
Target Start/End: Original strand, 9650713 - 9650844
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    ||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9650713 tactacctccggtcctatttataagagaaatttaggtcaacataaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 9650812  T
Q  272 aattctctaataaataggaccggagggagtat 303  Q
    |||||||| |||||||||||||||||||||||    
T  9650813 aattctcttataaataggaccggagggagtat 9650844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 389 - 541
Target Start/End: Original strand, 21402107 - 21402259
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21402107 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 21402206  T
Q  489 aaaccaactagtatactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    ||||  |||| |||||||||||       ||||||||||||||||||||||||    
T  21402207 aaactcactactatactccaagtttttttcattatacactagtgttccaacaa 21402259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 170 - 305
Target Start/End: Complemental strand, 35031133 - 35030998
Alignment:
Q  170 tatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccc 269  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  35031133 tatactacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaatttttgttgaccc 35031034  T
Q  270 aaaattctctaataaataggaccggagggagtataa 305  Q
    |||||||||| ||||||||||||||||| |||||||    
T  35031033 aaaattctcttataaataggaccggaggaagtataa 35030998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 389 - 540
Target Start/End: Complemental strand, 29490959 - 29490808
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  29490959 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaagctccac 29490860  T
Q  489 aaaccaactagtatactccaagnnnnnnncattatacactagtgttccaaca 540  Q
    ||||  ||||||||||||||||       |||||||||||||||||||||||    
T  29490859 aaactcactagtatactccaagtttttttcattatacactagtgttccaaca 29490808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 171 - 304
Target Start/End: Original strand, 6068565 - 6068698
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    ||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  6068565 atactacctccggtcctatttataagaaaaatttaggtcaataaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgactca 6068664  T
Q  271 aaattctctaataaataggaccggagggagtata 304  Q
    ||||||||| ||||||||||||||||||||||||    
T  6068665 aaattctcttataaataggaccggagggagtata 6068698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 171 - 302
Target Start/End: Original strand, 6143553 - 6143684
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  6143553 atactacctccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgtccca 6143652  T
Q  271 aaattctctaataaataggaccggagggagta 302  Q
    ||||||||| |||||||| |||||| ||||||    
T  6143653 aaattctcttataaatagaaccggaaggagta 6143684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 171 - 302
Target Start/End: Complemental strand, 8417924 - 8417793
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    ||||| |||| |||| |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  8417924 atactccctctggtcttatttataagagaaatttaggtcaacaaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgaccca 8417825  T
Q  271 aaattctctaataaataggaccggagggagta 302  Q
    ||||||||| ||||||||||||| ||||||||    
T  8417824 aaattctcttataaataggaccgaagggagta 8417793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 188 - 304
Target Start/End: Complemental strand, 28747248 - 28747132
Alignment:
Q  188 atttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctctaataaata 287  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  28747248 atttataagagaaatttagatcaacaaaagtgaatgtatttggactgaatttttaattagatacatcaacttttgttgacccaaaattctcttataaata 28747149  T
Q  288 ggaccggagggagtata 304  Q
    |||| | ||||||||||    
T  28747148 ggactgaagggagtata 28747132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 384 - 540
Target Start/End: Original strand, 31983470 - 31983626
Alignment:
Q  384 aaacactactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggc 483  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||| | |    
T  31983470 aaacactactagagtgtgtgatctacccaatgcgggacataaaattttcaattcacactttacactaatttctacatcattgtgtttacattccaatgtc 31983569  T
Q  484 tccacaaaccaactagtatactccaagnnnnnnncattatacactagtgttccaaca 540  Q
    ||| || |  |||||||||||||||||       || ||||||||||||||||||||    
T  31983570 tcctcataaaaactagtatactccaagtttttgccaatatacactagtgttccaaca 31983626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 172 - 264
Target Start/End: Original strand, 13043758 - 13043850
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgtt 264  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||| | ||||||||||||||||||||||||||||||||    
T  13043758 tactacctccggttctatttataagagaaatttaggtcaacaaaaatgaatgtatttgaattgaatttttaactagatacatcaacttttgtt 13043850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 202 - 302
Target Start/End: Original strand, 17992018 - 17992118
Alignment:
Q  202 tttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctctaataaataggaccggagggagt 301  Q
    ||||||| || ||||||||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||| |||||||    
T  17992018 tttaggtcaataaaagtgaatgtatttggattgaatttttaactagatacatcgatttttgttgacccaaaattctcttataaataggaccgaagggagt 17992117  T
Q  302 a 302  Q
    |    
T  17992118 a 17992118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 172 - 304
Target Start/End: Original strand, 22896471 - 22896594
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    |||| |||||||||||||||||||||||| ||||||| ||||         |||||||||||||||||||||||||||||||||||||||||||||  ||    
T  22896471 tactccctccggtcctatttataagagaagtttaggtcaaca---------gtatttggactgaatttttaactagatacatcaacttttgttgacaaaa 22896561  T
Q  272 aattctctaataaataggaccggagggagtata 304  Q
    |||||||| |||||||||||||| |||||||||    
T  22896562 aattctcttataaataggaccggcgggagtata 22896594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 301 - 390
Target Start/End: Original strand, 31982091 - 31982180
Alignment:
Q  301 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacact 390  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||  ||| ||||||||||||||||||||||||||||||||||    
T  31982091 tataatttttggctagcgctcactccgttcacaaaagtgggtaccccaagggcacgcccttggaagtgatatcccacatatataaacact 31982180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 180 - 268
Target Start/End: Complemental strand, 6069062 - 6068974
Alignment:
Q  180 ccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacc 268  Q
    |||||||||||||||| ||| |||||||| ||||||||| ||||||||||| || ||||||||||| ||||| ||| ||||||||||||    
T  6069062 ccggtcctatttataaaagatatttaggtcaacaaaagttaatgtatttggtctaaatttttaactcgatacttcatcttttgttgacc 6068974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 170 - 302
Target Start/End: Complemental strand, 7597109 - 7596977
Alignment:
Q  170 tatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccc 269  Q
    |||||| |||||  || ||||||||||||||| ||  ||||||||||||  ||||||  | |||||||||||||||| |||||||||||||| ||||| |    
T  7597109 tatactccctccaatcttatttataagagaaagttgtgttaacaaaagttgatgtatccgaactgaatttttaactaaatacatcaacttttattgactc 7597010  T
Q  270 aaaattctctaataaataggaccggagggagta 302  Q
    ||| |||||  ||||||||||  ||||||||||    
T  7597009 aaatttctcctataaataggattggagggagta 7596977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 171 - 304
Target Start/End: Original strand, 3788035 - 3788169
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaa-caaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccc 269  Q
    ||||| ||| || |||||||||||||||||| || ||| || ||||| |   || || ||||||||||| ||||||| |||||||||||||||||||||     
T  3788035 atactccctacgatcctatttataagagaaagttgggtcaatcaaaatttgttggatgtggactgaattgttaactaaatacatcaacttttgttgacct 3788134  T
Q  270 aaaattctctaataaataggaccggagggagtata 304  Q
    ||| || ||| ||||||| ||||||||||||||||    
T  3788135 aaatttatcttataaataagaccggagggagtata 3788169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 177 - 304
Target Start/End: Complemental strand, 14936582 - 14936455
Alignment:
Q  177 cctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattc 276  Q
    |||| |||||||||||||||||| |||| ||| ||||| |||  |||||||||||   |||| |||||||||||||||| |||||||||||| |||  |     
T  14936582 cctctggtcctatttataagagatatttgggtcaacaatagttgatgtatttggaacaaattcttaactagatacatcaccttttgttgacctaaatgtt 14936483  T
Q  277 tctaataaataggaccggagggagtata 304  Q
    |||  || |||||||| |||||||||||    
T  14936482 tcttctatataggaccagagggagtata 14936455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 171 - 307
Target Start/End: Complemental strand, 8099661 - 8099525
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    ||||| |||||||||||||||||||||||| ||| ||| |||||||||  |||||| | |    || ||  | | | ||||||  ||||||||||||| |    
T  8099661 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgaccta 8099562  T
Q  271 aaattctctaataaataggaccggagggagtataatt 307  Q
    || |||||| ||||||||||||||||| |||||||||    
T  8099561 aatttctcttataaataggaccggaggtagtataatt 8099525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 305
Target Start/End: Original strand, 11572141 - 11572278
Alignment:
Q  168 tatatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgac 267  Q
    |||||||| |||||||||||||||||||||||| ||| ||| |||||||||  |||||| | |    || ||    | | ||||||  ||||||||||||    
T  11572141 tatatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgac 11572240  T
Q  268 ccaaaattctctaataaataggaccggagggagtataa 305  Q
    | ||| |||||| ||||||||||||||||| |||||||    
T  11572241 ctaaatttctcttataaataggaccggaggtagtataa 11572278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 287
Target Start/End: Original strand, 6549902 - 6549997
Alignment:
Q  191 tataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctctaataaata 287  Q
    |||||||||||||||||| ||||||||| ||||||||| ||   || |||  |||||||||||||||||||||| ||| |||  ||||| |||||||    
T  6549902 tataagagaaatttaggtcaacaaaagttaatgtattt-gatgaaaatttggactagatacatcaacttttgttaaccaaaatatctcttataaata 6549997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 8186441 - 8186497
Alignment:
Q  246 agatacatcaacttttgttgacccaaaattctctaataaataggaccggagggagta 302  Q
    ||||||||||||||||||||| ||||| |||| | |||||||||||||| |||||||    
T  8186441 agatacatcaacttttgttgatccaaatttcttttataaataggaccggggggagta 8186497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 169 - 228
Target Start/End: Complemental strand, 3788170 - 3788111
Alignment:
Q  169 atatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtattt 228  Q
    ||||||| ||||||||| ||||||||||| |||||||||| |||||||||  ||||||||    
T  3788170 atatactccctccggtcttatttataagataaatttaggtcaacaaaagttgatgtattt 3788111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 6330248 - 6330199
Alignment:
Q  169 atatactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    ||||||| |||||||||||||||||||||||| ||| ||| |||||||||    
T  6330248 atatactccctccggtcctatttataagagaattttgggtcaacaaaagt 6330199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 304
Target Start/End: Complemental strand, 2830465 - 2830333
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    |||| |||||||||||||||||||||||| ||| ||| |||||||||  |||||| | |    || ||    | | ||||||  ||||||||||||| ||    
T  2830465 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 2830366  T
Q  272 aattctctaataaataggaccggagggagtata 304  Q
    | |||||| ||||||||||||||||| ||||||    
T  2830365 atttctcttataaataggaccggaggtagtata 2830333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 310
Target Start/End: Original strand, 13853591 - 13853731
Alignment:
Q  170 tatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccc 269  Q
    |||||| |||||||||||||||||||||||| ||| ||| |||||||||  |||||| | |    || ||    | | ||||||  |||||||||||||     
T  13853591 tatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 13853690  T
Q  270 aaaattctctaataaataggaccggagggagtataattttt 310  Q
    ||| |||||| ||||||||||||| ||| ||||| ||||||    
T  13853691 aaatttctcttataaataggaccgaaggtagtattattttt 13853731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 248 - 308
Target Start/End: Complemental strand, 31849634 - 31849574
Alignment:
Q  248 atacatcaacttttgttgacccaaaattctctaataaataggaccggagggagtataattt 308  Q
    ||||||||||||||||||||||| |  ||||| ||||||| |||||||| || ||||||||    
T  31849634 atacatcaacttttgttgacccatatgtctcttataaatatgaccggagtgattataattt 31849574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 256 - 303
Target Start/End: Original strand, 8383053 - 8383100
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagtat 303  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| |||||    
T  8383053 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 8383100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 218
Target Start/End: Complemental strand, 9644827 - 9644780
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    ||||| |||||||||||||||||||||||| ||| ||| |||||||||    
T  9644827 atactccctccggtcctatttataagagaattttgggtcaacaaaagt 9644780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 218
Target Start/End: Complemental strand, 9650844 - 9650797
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    ||||| |||||||||||||||||||||||| ||| ||| |||||||||    
T  9650844 atactccctccggtcctatttataagagaattttgggtcaacaaaagt 9650797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 248 - 299
Target Start/End: Original strand, 14936533 - 14936584
Alignment:
Q  248 atacatcaacttttgttgacccaaaattctctaataaataggaccggaggga 299  Q
    ||||||||||| |||||||||||||  ||||| |||||||||||| ||||||    
T  14936533 atacatcaactattgttgacccaaatatctcttataaataggaccagaggga 14936584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 218
Target Start/End: Complemental strand, 26602454 - 26602407
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    ||||| |||||||||||||||||||||||| ||| ||| |||||||||    
T  26602454 atactccctccggtcctatttataagagaattttgggtcaacaaaagt 26602407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 256 - 303
Target Start/End: Original strand, 33052878 - 33052925
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagtat 303  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| |||||    
T  33052878 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 33052925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 256 - 302
Target Start/End: Complemental strand, 6330161 - 6330115
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagta 302  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| ||||    
T  6330161 acttttgttgacctaaatttctcttataaataggaccggaggtagta 6330115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 223 - 281
Target Start/End: Complemental strand, 8026175 - 8026117
Alignment:
Q  223 gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctctaa 281  Q
    |||| ||||||||||||||| |  ||| |||||||||||||||||| ||| ||||||||    
T  8026175 gtatctggactgaatttttatccggatgcatcaacttttgttgacctaaatttctctaa 8026117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 8382969 - 8383015
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    |||| |||||||||||||||||||||||| ||| ||| |||||||||    
T  8382969 tactccctccggtcctatttataagagaattttgggtcaacaaaagt 8383015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 256 - 302
Target Start/End: Complemental strand, 26602369 - 26602323
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagta 302  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| ||||    
T  26602369 acttttgttgacctaaatttctcttataaataggaccggaggtagta 26602323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 35030999 - 35031045
Alignment:
Q  170 tatactacctccggtcctatttataagagaaatttaggttaacaaaa 216  Q
    |||||| |||||||||||||||||||||||| ||| ||| |||||||    
T  35030999 tatacttcctccggtcctatttataagagaattttgggtcaacaaaa 35031045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 6068699 - 6068650
Alignment:
Q  169 atatactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    ||||||| |||||||||||||||||||||||| |||  || |||||||||    
T  6068699 atatactccctccggtcctatttataagagaattttgagtcaacaaaagt 6068650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 261 - 302
Target Start/End: Complemental strand, 22896512 - 22896471
Alignment:
Q  261 tgttgacccaaaattctctaataaataggaccggagggagta 302  Q
    |||||||| ||| |||||| ||||||||||||||||||||||    
T  22896512 tgttgacctaaacttctcttataaataggaccggagggagta 22896471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 256 - 305
Target Start/End: Original strand, 35031085 - 35031134
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagtataa 305  Q
    ||||||||||||| ||| || ||| ||||||||||||||||| |||||||    
T  35031085 acttttgttgacctaaatttttcttataaataggaccggaggtagtataa 35031134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 191; Significance: 1e-103; HSPs: 85)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 301 - 540
Target Start/End: Complemental strand, 30341439 - 30341200
Alignment:
Q  301 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgt 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  30341439 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgt 30341340  T
Q  401 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagt 500  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  30341339 gtgatctacctaatgtgggccataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacataacaactagt 30341240  T
Q  501 atactccaagnnnnnnncattatacactagtgttccaaca 540  Q
    ||||||||||       || ||||||||||||||||||||    
T  30341239 atactccaagtttttgccaatatacactagtgttccaaca 30341200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 190; E-Value: 1e-102
Query Start/End: Original strand, 301 - 510
Target Start/End: Complemental strand, 34128646 - 34128437
Alignment:
Q  301 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgt 400  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||   ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  34128646 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaaaggcacactcttggaagtgatatcccacatatataaacactactagagtgt 34128547  T
Q  401 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagt 500  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  34128546 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaatcaactagt 34128447  T
Q  501 atactccaag 510  Q
    ||||||||||    
T  34128446 atactccaag 34128437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 301 - 541
Target Start/End: Original strand, 17358478 - 17358717
Alignment:
Q  301 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgt 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||    
T  17358478 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaaggggacacccttggaagtgatatcccacatatataaacactactagagtgt 17358577  T
Q  401 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagt 500  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  17358578 gtgatctacccaatgtgggacataaaattttcaattcacactttacacta-tttctccatccttgtgtttacattccaaaggctccacaaaccaactagt 17358676  T
Q  501 atactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    ||| ||||||       ||||||| |||||||||| |||||    
T  17358677 ataatccaagttttttccattatatactagtgttctaacaa 17358717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 184; E-Value: 4e-99
Query Start/End: Original strand, 301 - 541
Target Start/End: Complemental strand, 3481884 - 3481644
Alignment:
Q  301 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgt 400  Q
    ||||||||||||| ||||||||||||||||||| |||||  |||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||    
T  3481884 tataatttttggctagcgctcactccgttcacagaagtggataccccaagggcacacccttggaagtgatttcccacatatataaacactactagagtgt 3481785  T
Q  401 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagt 500  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||    
T  3481784 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagt 3481685  T
Q  501 atactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    ||||||||||       ||||||||||||||||||||||||    
T  3481684 atactccaagtttttttcattatacactagtgttccaacaa 3481644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 180; E-Value: 1e-96
Query Start/End: Original strand, 301 - 541
Target Start/End: Complemental strand, 30338335 - 30338095
Alignment:
Q  301 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgt 400  Q
    |||||| |||||||| ||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  30338335 tataatgtttggcaaacgcacactccgttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgt 30338236  T
Q  401 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagt 500  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||    
T  30338235 gtgatctacccaatgtgggacataaaattttcaattcacactttacactaatttctccatccttgtgtttacattccaaaggctccacataacaactagt 30338136  T
Q  501 atactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    ||||||||||       || ||||||||| |||||||||||    
T  30338135 atactccaagtttttgccaatatacactactgttccaacaa 30338095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 301 - 540
Target Start/End: Complemental strand, 3476427 - 3476188
Alignment:
Q  301 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgt 400  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||    
T  3476427 tataatttttggctagcgctcactccgttcacaaaagtgggtaccccaagggcacacccttggaagtgatttcccacatatataaacactactagagtgt 3476328  T
Q  401 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagt 500  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||   |||| || | ||||||||    
T  3476327 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctacatcattgtgtttacattccaatttctcctcataacaactagt 3476228  T
Q  501 atactccaagnnnnnnncattatacactagtgttccaaca 540  Q
    ||||||||||       || ||||||||||||||||||||    
T  3476227 atactccaagtttttgccaatatacactagtgttccaaca 3476188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 301 - 540
Target Start/End: Complemental strand, 4117185 - 4116946
Alignment:
Q  301 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgt 400  Q
    ||||||||||||| || |||||||||||||||||||||| ||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||    
T  4117185 tataatttttggctagagctcactccgttcacaaaagtgggtaccccaagggcacacccttggaagtgatttcccacatatataaacactactagagtgt 4117086  T
Q  401 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagt 500  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |  ||| || | ||||||||    
T  4117085 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttcttcatcattgtgtttacattccaatgtttcctcataacaactagt 4116986  T
Q  501 atactccaagnnnnnnncattatacactagtgttccaaca 540  Q
    ||||||||||       || ||||||||||||||||||||    
T  4116985 atactccaagtttttgccaatatacactagtgttccaaca 4116946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 157; E-Value: 5e-83
Query Start/End: Original strand, 301 - 540
Target Start/End: Original strand, 54271231 - 54271463
Alignment:
Q  301 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgt 400  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||       ||||||||||||||||||||||||    
T  54271231 tataatttttggcaagcgctcactccgttcacaaaagtgggtaccccaagggcacacccttggaagtga-------catatataaacactactagagtgt 54271323  T
Q  401 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagt 500  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  54271324 gtgatctacccaatgtgggacataaaattttcaattcacactttagactagtttctccatccttgtgtttacattccaaaggctccacataacaactagt 54271423  T
Q  501 atactccaagnnnnnnncattatacactagtgttccaaca 540  Q
    ||||| ||||       || |||| |||||||||||||||    
T  54271424 atacttcaagtttttgccaatataaactagtgttccaaca 54271463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 130; E-Value: 7e-67
Query Start/End: Original strand, 168 - 305
Target Start/End: Complemental strand, 49823515 - 49823378
Alignment:
Q  168 tatatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgac 267  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49823515 tatatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgac 49823416  T
Q  268 ccaaaattctctaataaataggaccggagggagtataa 305  Q
    |||||||||||| |||||||||||||||||||||||||    
T  49823415 ccaaaattctcttataaataggaccggagggagtataa 49823378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 167 - 302
Target Start/End: Complemental strand, 19557187 - 19557052
Alignment:
Q  167 ttatatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttga 266  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19557187 ttatatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttga 19557088  T
Q  267 cccaaaattctctaataaataggaccggagggagta 302  Q
    ||||||||||||| ||||||||||||||||||||||    
T  19557087 cccaaaattctcttataaataggaccggagggagta 19557052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 125; E-Value: 7e-64
Query Start/End: Original strand, 171 - 303
Target Start/End: Complemental strand, 40691127 - 40690995
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40691127 atactaactccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 40691028  T
Q  271 aaattctctaataaataggaccggagggagtat 303  Q
    ||||||||| |||||||||||||||||||||||    
T  40691027 aaattctcttataaataggaccggagggagtat 40690995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 172 - 303
Target Start/End: Original strand, 10297979 - 10298110
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10297979 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 10298078  T
Q  272 aattctctaataaataggaccggagggagtat 303  Q
    |||||||| |||||||||||||||||||||||    
T  10298079 aattctcttataaataggaccggagggagtat 10298110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 171 - 304
Target Start/End: Original strand, 22721930 - 22722063
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22721930 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 22722029  T
Q  271 aaattctctaataaataggaccggagggagtata 304  Q
    ||||||||| ||||||||||||||| ||||||||    
T  22722030 aaattctcttataaataggaccggatggagtata 22722063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 171 - 306
Target Start/End: Original strand, 8437424 - 8437559
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  8437424 atactacctccggtcctatttataagagaaatttaggtcaataaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactca 8437523  T
Q  271 aaattctctaataaataggaccggagggagtataat 306  Q
    ||||||||| ||||||||||||||||||||||||||    
T  8437524 aaattctcttataaataggaccggagggagtataat 8437559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 171 - 302
Target Start/End: Complemental strand, 34080161 - 34080030
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  34080161 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaacaagatacatcaacttttgttgaccca 34080062  T
Q  271 aaattctctaataaataggaccggagggagta 302  Q
    ||||||||| ||||||||||||||||||||||    
T  34080061 aaattctcttataaataggaccggagggagta 34080030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 172 - 310
Target Start/End: Original strand, 37508921 - 37509059
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37508921 tactccctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 37509020  T
Q  272 aattctctaataaataggaccggagggagtataattttt 310  Q
    |||||||| ||||||||||||||||| ||||||| ||||    
T  37509021 aattctcttataaataggaccggaggtagtataaatttt 37509059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 172 - 302
Target Start/End: Original strand, 48340397 - 48340527
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48340397 tactacctccggtcctatttacaagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 48340496  T
Q  272 aattctctaataaataggaccggagggagta 302  Q
    |||||||| ||||||||||||||||||||||    
T  48340497 aattctcttataaataggaccggagggagta 48340527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 171 - 303
Target Start/End: Original strand, 4238593 - 4238725
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  4238593 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccaa 4238692  T
Q  271 aaattctctaataaataggaccggagggagtat 303  Q
    ||||||||| ||||||||||||||||| |||||    
T  4238693 aaattctcttataaataggaccggaggtagtat 4238725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 171 - 303
Target Start/End: Complemental strand, 8817517 - 8817385
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8817517 atactaccttcggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 8817418  T
Q  271 aaattctctaataaataggaccggagggagtat 303  Q
    ||||||||| ||||||||||||||| |||||||    
T  8817417 aaattctcttataaataggaccggaaggagtat 8817385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 172 - 304
Target Start/End: Original strand, 51406673 - 51406805
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  51406673 tactacctccggtcttatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaatttttgttgacccaa 51406772  T
Q  272 aattctctaataaataggaccggagggagtata 304  Q
    |||||||| ||||||||||||||||||||||||    
T  51406773 aattctcttataaataggaccggagggagtata 51406805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 171 - 302
Target Start/End: Complemental strand, 2787963 - 2787832
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  2787963 atactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgctgaccca 2787864  T
Q  271 aaattctctaataaataggaccggagggagta 302  Q
    ||||||||| ||||||||||||||||||||||    
T  2787863 aaattctcttataaataggaccggagggagta 2787832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 172 - 303
Target Start/End: Original strand, 17653712 - 17653843
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17653712 tactccctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 17653811  T
Q  272 aattctctaataaataggaccggagggagtat 303  Q
    |||||||| ||||||||||||||||| |||||    
T  17653812 aattctcttataaataggaccggaggtagtat 17653843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 171 - 302
Target Start/End: Complemental strand, 21295457 - 21295326
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |    
T  21295457 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaattagatacatcaacttttgttgaccta 21295358  T
Q  271 aaattctctaataaataggaccggagggagta 302  Q
    ||||||||| ||||||||||||||||||||||    
T  21295357 aaattctcttataaataggaccggagggagta 21295326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 171 - 302
Target Start/End: Original strand, 38964391 - 38964522
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  38964391 atactacctccggtcctatttataagagaaatttagatcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccaa 38964490  T
Q  271 aaattctctaataaataggaccggagggagta 302  Q
    ||||||||| ||||||||||||||||||||||    
T  38964491 aaattctcttataaataggaccggagggagta 38964522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 171 - 302
Target Start/End: Complemental strand, 44785527 - 44785396
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44785527 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 44785428  T
Q  271 aaattctctaataaataggaccggagggagta 302  Q
    ||||||||| |||||||| |||||||| ||||    
T  44785427 aaattctcttataaatagaaccggaggaagta 44785396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 170 - 305
Target Start/End: Original strand, 46208028 - 46208163
Alignment:
Q  170 tatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccc 269  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  46208028 tatactccctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgacct 46208127  T
Q  270 aaaattctctaataaataggaccggagggagtataa 305  Q
    |||||||||| |||||||||||||||||||||||||    
T  46208128 aaaattctcttataaataggaccggagggagtataa 46208163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 389 - 540
Target Start/End: Original strand, 17369085 - 17369236
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17369085 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 17369184  T
Q  489 aaaccaactagtatactccaagnnnnnnncattatacactagtgttccaaca 540  Q
    ||||||||||||||| || |||       ||||||| |||||||||||||||    
T  17369185 aaaccaactagtataatcgaagttttttccattatatactagtgttccaaca 17369236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 171 - 304
Target Start/End: Complemental strand, 9111625 - 9111492
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  9111625 atactaccttcggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgaactgaatttttaactagatacatcaacttttgttgaccca 9111526  T
Q  271 aaattctctaataaataggaccggagggagtata 304  Q
    ||||||||| ||||||||||||||||||| ||||    
T  9111525 aaattctcttataaataggaccggagggaatata 9111492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 171 - 299
Target Start/End: Complemental strand, 42507486 - 42507358
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  42507486 atactacctccggtcctatttataatagaaatttaggtcaacaaaagtgaatgtatttggactgaattttgaactagatacatcaacttttgttgaccca 42507387  T
Q  271 aaattctctaataaataggaccggaggga 299  Q
    ||||||||| |||||||||||||||||||    
T  42507386 aaattctcttataaataggaccggaggga 42507358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 389 - 541
Target Start/End: Complemental strand, 20090338 - 20090186
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||    
T  20090338 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatcctgatgtttacatgccaaaggctccac 20090239  T
Q  489 aaaccaactagtatactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    ||||  ||||||||||||||||       ||||||||||||||||||||||||    
T  20090238 aaactcactagtatactccaagtttttttcattatacactagtgttccaacaa 20090186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 389 - 541
Target Start/End: Complemental strand, 20095463 - 20095311
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||    
T  20095463 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatcctgatgtttacatgccaaaggctccac 20095364  T
Q  489 aaaccaactagtatactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    ||||  ||||||||||||||||       ||||||||||||||||||||||||    
T  20095363 aaactcactagtatactccaagtttttttcattatacactagtgttccaacaa 20095311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 389 - 541
Target Start/End: Complemental strand, 15767867 - 15767716
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  15767867 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttatgtttacatgccaaaggctccac 15767768  T
Q  489 aaaccaactagtatactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    ||||  ||||||||||||||||       ||||||||||||||||||||||||    
T  15767767 aaactcactagtatactccaag-ttttttcattatacactagtgttccaacaa 15767716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 389 - 540
Target Start/End: Complemental strand, 15762706 - 15762556
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  15762706 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttatgtttacatgccaaaggctccac 15762607  T
Q  489 aaaccaactagtatactccaagnnnnnnncattatacactagtgttccaaca 540  Q
    ||||  ||||||||||||||||       |||||||||||||||||||||||    
T  15762606 aaactcactagtatactccaag-ttttttcattatacactagtgttccaaca 15762556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 171 - 302
Target Start/End: Complemental strand, 42170477 - 42170346
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  42170477 atactacctccggtcttatttataagagaaatttaggtcaacaaaagtgaatgtatttggagtgaatttttaaccagatacatcaacttttgttgaccca 42170378  T
Q  271 aaattctctaataaataggaccggagggagta 302  Q
    ||||||||| |||||||||||| || ||||||    
T  42170377 aaattctcttataaataggaccagatggagta 42170346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 170 - 303
Target Start/End: Complemental strand, 36095812 - 36095679
Alignment:
Q  170 tatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccc 269  Q
    |||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  36095812 tatactccctccggtcctatttataagataaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgatcc 36095713  T
Q  270 aaaattctctaataaataggaccggagggagtat 303  Q
    ||||||||||  |||||| |||||||| ||||||    
T  36095712 aaaattctcttgtaaataagaccggagtgagtat 36095679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 389 - 510
Target Start/End: Original strand, 55129156 - 55129276
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  55129156 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccat-cttgtgtttacattccaaaggctccac 55129254  T
Q  489 aaaccaactagtatactccaag 510  Q
    ||||  ||||||||||||||||    
T  55129255 aaactcactagtatactccaag 55129276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 177 - 302
Target Start/End: Complemental strand, 6013461 - 6013336
Alignment:
Q  177 cctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattc 276  Q
    ||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||    
T  6013461 cctccagtccaatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataaatttacttttgttgacccaaaattc 6013362  T
Q  277 tctaataaataggaccggagggagta 302  Q
    ||| ||||||||||||||||||||||    
T  6013361 tcttataaataggaccggagggagta 6013336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 172 - 302
Target Start/End: Original strand, 35513473 - 35513603
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    |||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||     
T  35513473 tactcccttcggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaccttttattgatccag 35513572  T
Q  272 aattctctaataaataggaccggagggagta 302  Q
    |||||| | |||||||||| |||||||||||    
T  35513573 aattcttttataaataggatcggagggagta 35513603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 179 - 309
Target Start/End: Complemental strand, 33943055 - 33942925
Alignment:
Q  179 tccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctc 278  Q
    |||| |||||||||||| ||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||    
T  33943055 tccgatcctatttataaaagaaagttaggtcaacaaaagttaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaagtttctc 33942956  T
Q  279 taataaataggaccggagggagtataatttt 309  Q
    | |||||||||| ||| | ||||||||||||    
T  33942955 ttataaataggatcggcgagagtataatttt 33942925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 171 - 302
Target Start/End: Original strand, 9213515 - 9213646
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    ||||| ||||||||||||||||||| ||| ||||  || |||||||||  |||||| |||||| | ||| |||| | ||||||||| ||||||||||| |    
T  9213515 atactccctccggtcctatttataaaagacattttagtcaacaaaagttgatgtatctggactaattttataaccaaatacatcaatttttgttgaccta 9213614  T
Q  271 aaattctctaataaataggaccggagggagta 302  Q
    || |||||||||||||||||| ||||||||||    
T  9213615 aatttctctaataaataggacgggagggagta 9213646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 169 - 302
Target Start/End: Original strand, 34988072 - 34988205
Alignment:
Q  169 atatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacc 268  Q
    ||||||| ||| ||||||||||||| ||||| |||| ||| |||||||||  || ||| ||| |    |||||||||||||||||||||| ||||||||     
T  34988072 atatactcccttcggtcctatttattagagacatttgggtcaacaaaagttgatctatctggtccacttttttaactagatacatcaactattgttgact 34988171  T
Q  269 caaaattctctaataaataggaccggagggagta 302  Q
    ||||  | ||| ||||||||||||||||||||||    
T  34988172 caaatatttcttataaataggaccggagggagta 34988205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 171 - 303
Target Start/End: Complemental strand, 26019610 - 26019479
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    ||||| ||||| || |||||||||||||||| || ||||||| ||||| ||||||| | |||| |||||| ||| |||||||| |||||| ||||||| |    
T  26019610 atacttcctccagttctatttataagagaaagttgggttaac-aaagttaatgtatcttgactaaattttgaaccagatacataaactttggttgaccaa 26019512  T
Q  271 aaattctctaataaataggaccggagggagtat 303  Q
    |  |||||| |||||||||| |||| |||||||    
T  26019511 attttctcttataaataggatcggaaggagtat 26019479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 246 - 304
Target Start/End: Complemental strand, 34988131 - 34988073
Alignment:
Q  246 agatacatcaacttttgttgacccaaaattctctaataaataggaccggagggagtata 304  Q
    ||||| |||||||||||||||||||||  ||||||||||||||||||| ||||||||||    
T  34988131 agatagatcaacttttgttgacccaaatgtctctaataaataggaccgaagggagtata 34988073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 2131746 - 2131802
Alignment:
Q  246 agatacatcaacttttgttgacccaaaattctctaataaataggaccggagggagta 302  Q
    |||||||||||||||||||||||||||  ||||| |||| |||||||||||||||||    
T  2131746 agatacatcaacttttgttgacccaaatgtctctcataagtaggaccggagggagta 2131802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 171 - 302
Target Start/End: Original strand, 5323205 - 5323337
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaattttt-aactagatacatcaacttttgttgaccc 269  Q
    ||||| || ||||||||||||| || ||||| ||  || |||||||   |||||||||| | ||||||||| ||| | ||||||||||||||||||||||    
T  5323205 atactccccccggtcctatttacaaaagaaaattgagtcaacaaaaaataatgtatttgaattgaattttttaaccaaatacatcaacttttgttgaccc 5323304  T
Q  270 aaaattctctaataaataggaccggagggagta 302  Q
    ||| ||  || |||||||| | |||||||||||    
T  5323305 aaattttacttataaatagtatcggagggagta 5323337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 247 - 303
Target Start/End: Complemental strand, 9027197 - 9027141
Alignment:
Q  247 gatacatcaacttttgttgacccaaaattctctaataaataggaccggagggagtat 303  Q
    |||||||||||||||||||||||||  || ||| |||||||||||||||||||||||    
T  9027197 gatacatcaacttttgttgacccaactttatcttataaataggaccggagggagtat 9027141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 17358300 - 17358340
Alignment:
Q  32 acgtgtgagacttggtctccgtgtgcgggaatctcggagca 72  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  17358300 acgtgtgagacttggtctccgtgtgcgggaatctcggagca 17358340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 34128801 - 34128761
Alignment:
Q  32 acgtgtgagacttggtctccgtgtgcgggaatctcggagca 72  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  34128801 acgtgtgagacttggtctccgtgtgcgggaatctcggagca 34128761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 302
Target Start/End: Complemental strand, 37509053 - 37508921
Alignment:
Q  170 tatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccc 269  Q
    ||||||||||||||||||||||||||||||| ||| ||| |||||||||  |||||| | |    || ||    | | ||||||  |||||||||||||     
T  37509053 tatactacctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 37508954  T
Q  270 aaaattctctaataaataggaccggagggagta 302  Q
    ||| |||||| ||||||||||||||||||||||    
T  37508953 aaatttctcttataaataggaccggagggagta 37508921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 172 - 303
Target Start/End: Complemental strand, 9213646 - 9213515
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    |||| ||||| ||||||||||| |||||||||||||| ||||||| |  ||||||||||    ||  ||   | ||||||||||||||||||||||  ||    
T  9213646 tactccctcccgtcctatttattagagaaatttaggtcaacaaaaattgatgtatttggttataaaattagtccagatacatcaacttttgttgactaaa 9213547  T
Q  272 aattctctaataaataggaccggagggagtat 303  Q
    |  ||| | |||||||||||||||||||||||    
T  9213546 atgtcttttataaataggaccggagggagtat 9213515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 302
Target Start/End: Complemental strand, 17653843 - 17653712
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||||||||||||||||||||||||||| ||| ||| |||||||||  |||||| | |    || ||    | | ||||||  ||||||||||||| |    
T  17653843 atactacctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 17653744  T
Q  271 aaattctctaataaataggaccggagggagta 302  Q
    || |||||| ||||||||||||||||||||||    
T  17653743 aatttctcttataaataggaccggagggagta 17653712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 305
Target Start/End: Complemental strand, 46208162 - 46208027
Alignment:
Q  170 tatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccc 269  Q
    |||||| |||||||||||||||||||||||| ||||||| |||||||||  |||||| |      || ||    | | ||||||  |||||||||||||     
T  46208162 tatactccctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacct 46208063  T
Q  270 aaaattctctaataaataggaccggagggagtataa 305  Q
    ||| |||||| |||||||||||||||||||||||||    
T  46208062 aaatttctcttataaataggaccggagggagtataa 46208027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 308
Target Start/End: Complemental strand, 4238725 - 4238588
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||||||||||||||||||||||||||| ||| ||| |||||||||  |||||| | |    || ||    | | ||||||  ||||||||||||| |    
T  4238725 atactacctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 4238626  T
Q  271 aaattctctaataaataggaccggagggagtataattt 308  Q
    || |||||| ||||||||||||||||| ||||| ||||    
T  4238625 aatttctcttataaataggaccggaggtagtattattt 4238588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 179 - 268
Target Start/End: Original strand, 8092595 - 8092684
Alignment:
Q  179 tccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacc 268  Q
    ||||||||||||||||||||||| ||   | ||| |||||  |||||| | |||| |||||||||| |||||||||||||| ||||||||    
T  8092595 tccggtcctatttataagagaaaattgaatcaactaaagttgatgtatctcgactaaatttttaaccagatacatcaacttctgttgacc 8092684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 30341603 - 30341563
Alignment:
Q  32 acgtgtgagacttggtctccgtgtgcgggaatctcggagca 72  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  30341603 acgtgtgagacttggtctccgcgtgcgggaatctcggagca 30341563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 353 - 388
Target Start/End: Original strand, 17358415 - 17358450
Alignment:
Q  353 cacacccttggaagtgatatcccacatatataaaca 388  Q
    ||||||||||||||||||||||||||||||||||||    
T  17358415 cacacccttggaagtgatatcccacatatataaaca 17358450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 33128202 - 33128261
Alignment:
Q  168 tatatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatt 227  Q
    ||||||||  |||| |||||| ||||||||||||||||||| ||||||||| ||||||||    
T  33128202 tatatactctctccagtcctaattataagagaaatttaggtcaacaaaagttaatgtatt 33128261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 21295326 - 21295372
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    |||| |||||||||||||||||||||||| ||||||| |||||||||    
T  21295326 tactccctccggtcctatttataagagaattttaggtcaacaaaagt 21295372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 272
Target Start/End: Complemental strand, 29285873 - 29285790
Alignment:
Q  187 tatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaa 272  Q
    ||||||||||| |||||||||| ||||||||||||  ||| ||  || |||||| ||||| |||||| |||||||||||| |||||    
T  29285873 tatttataagataaatttaggtcaacaaaagtgaa--tatctgatctaaattttgaactacatacataaacttttgttgatccaaa 29285790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 304
Target Start/End: Original strand, 49823379 - 49823513
Alignment:
Q  170 tatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccc 269  Q
    |||||| |||||||||||||||||||||||| ||| ||| |||||||||  |||||| | |    || ||    | | ||||||  |||||||||||||     
T  49823379 tatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 49823478  T
Q  270 aaaattctctaataaataggaccggagggagtata 304  Q
    ||| |||||| ||||||||||||||||| ||||||    
T  49823479 aaatttctcttataaataggaccggaggtagtata 49823513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 257
Target Start/End: Original strand, 43323072 - 43323145
Alignment:
Q  184 tcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaac 257  Q
    |||||||||||||| ||| || ||| |||||||||  ||||||||||| | |||||||||| | ||||||||||    
T  43323072 tcctatttataagaaaaaattgggtcaacaaaagttgatgtatttggattaaatttttaaccaaatacatcaac 43323145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 272
Target Start/End: Complemental strand, 2131802 - 2131702
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    |||| |||||||||||| |||| ||||| |||| ||| |||||||||  |||||| ||| || ||||||  || || ||||  |||||||||||||||||    
T  2131802 tactccctccggtcctacttatgagagacatttgggtcaacaaaagttgatgtatctggtctaaattttgcaccaggtacagtaacttttgttgacccaa 2131703  T
Q  272 a 272  Q
    |    
T  2131702 a 2131702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 255
Target Start/End: Complemental strand, 8951987 - 8951943
Alignment:
Q  211 acaaaagtgaatgtatttggactgaatttttaactagatacatca 255  Q
    |||||||| ||||||||||||||||||||||||| | ||||||||    
T  8951987 acaaaagttaatgtatttggactgaatttttaacaaaatacatca 8951943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 256 - 304
Target Start/End: Original strand, 19557136 - 19557184
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagtata 304  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| ||||||    
T  19557136 acttttgttgacctaaatttctcttataaataggaccggaggtagtata 19557184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 256 - 304
Target Start/End: Original strand, 36095764 - 36095812
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagtata 304  Q
    ||||||||||||| ||| || ||| ||||||||||||||||||||||||    
T  36095764 acttttgttgacctaaatttatcttataaataggaccggagggagtata 36095812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 243 - 303
Target Start/End: Complemental strand, 45652128 - 45652068
Alignment:
Q  243 actagatacatcaacttttgttgacccaaaattctctaataaataggaccggagggagtat 303  Q
    |||||||||||| | |||||||||| ||||  ||||| ||||||||||| |||||||||||    
T  45652128 actagatacatccatttttgttgactcaaatgtctcttataaataggactggagggagtat 45652068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 51406807 - 51406759
Alignment:
Q  168 tatatactacctccggtcctatttataagagaaatttaggttaacaaaa 216  Q
    |||||||| |||||||||||||||||||||||| ||| ||| |||||||    
T  51406807 tatatactccctccggtcctatttataagagaattttgggtcaacaaaa 51406759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 218
Target Start/End: Complemental strand, 10298110 - 10298063
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    ||||| |||||||||||||||||||||||| ||| ||| |||||||||    
T  10298110 atactccctccggtcctatttataagagaattttgggtcaacaaaagt 10298063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 248 - 303
Target Start/End: Original strand, 21295402 - 21295457
Alignment:
Q  248 atacatcaacttttgttgacccaaaattctctaataaataggaccggagggagtat 303  Q
    ||||||  ||||||||||||| ||| |||||| ||||||||||||||||| |||||    
T  21295402 atacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 21295457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 256 - 303
Target Start/End: Complemental strand, 22721977 - 22721930
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagtat 303  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| |||||    
T  22721977 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 22721930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 256 - 303
Target Start/End: Original strand, 34080114 - 34080161
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagtat 303  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| |||||    
T  34080114 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 34080161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 218
Target Start/End: Original strand, 40690995 - 40691042
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    ||||| |||||||||||||||||||||||| ||| ||| |||||||||    
T  40690995 atactccctccggtcctatttataagagaattttgggtcaacaaaagt 40691042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 256 - 303
Target Start/End: Original strand, 44785480 - 44785527
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagtat 303  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| |||||    
T  44785480 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 44785527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 6013336 - 6013382
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    |||| |||||||||||||||||||||||| ||| ||| |||||||||    
T  6013336 tactccctccggtcctatttataagagaattttgggtcaacaaaagt 6013382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 256 - 302
Target Start/End: Complemental strand, 10298025 - 10297979
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagta 302  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| ||||    
T  10298025 acttttgttgacctaaatttctcttataaataggaccggaggtagta 10297979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 19557052 - 19557098
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    |||| |||||||||||||||||||||||| ||| ||| |||||||||    
T  19557052 tactccctccggtcctatttataagagaattttgggtcaacaaaagt 19557098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 34080030 - 34080076
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    |||| |||||||||||||||||||||||| ||| ||| |||||||||    
T  34080030 tactccctccggtcctatttataagagaattttgggtcaacaaaagt 34080076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 256 - 302
Target Start/End: Complemental strand, 35513519 - 35513473
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagta 302  Q
    ||||||||||||| ||| |||||| ||||||||||||| ||||||||    
T  35513519 acttttgttgacctaaatttctcttataaataggaccgaagggagta 35513473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 256 - 310
Target Start/End: Complemental strand, 38964438 - 38964384
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagtataattttt 310  Q
    ||||||||||| | ||| |||||| ||||||||||||||||| ||||| ||||||    
T  38964438 acttttgttgatctaaatttctcttataaataggaccggaggtagtattattttt 38964384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 38964522 - 38964476
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    |||| |||||||||||||||||||||||| ||| ||| |||||||||    
T  38964522 tactccctccggtcctatttataagagaatttttggtcaacaaaagt 38964476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 48340527 - 48340481
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    |||| |||||||||||||||||||||||| ||| ||| |||||||||    
T  48340527 tactccctccggtcctatttataagagaattttgggtcaacaaaagt 48340481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 218
Target Start/End: Original strand, 9111499 - 9111540
Alignment:
Q  177 cctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    |||||||||||||||||||||||| ||| ||| |||||||||    
T  9111499 cctccggtcctatttataagagaattttgggtcaacaaaagt 9111540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 226
Target Start/End: Complemental strand, 22722064 - 22722007
Alignment:
Q  169 atatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtat 226  Q
    ||||||| | |||||||||||||||||||||| ||| ||| |||||||||  ||||||    
T  22722064 atatactccatccggtcctatttataagagaattttgggtcaacaaaagttgatgtat 22722007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 218
Target Start/End: Original strand, 42507360 - 42507401
Alignment:
Q  177 cctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    |||||||||||||||||||||||| ||| ||| |||||||||    
T  42507360 cctccggtcctatttataagagaattttgggtcaacaaaagt 42507401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 54271108 - 54271149
Alignment:
Q  32 acgtgtgagacttggtc-tccgtgtgcgggaatctcggagca 72  Q
    ||||||||||||||||| |||| |||||||||||||||||||    
T  54271108 acgtgtgagacttggtcctccgcgtgcgggaatctcggagca 54271149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 184; Significance: 4e-99; HSPs: 87)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 184; E-Value: 4e-99
Query Start/End: Original strand, 301 - 541
Target Start/End: Original strand, 53798241 - 53798481
Alignment:
Q  301 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgt 400  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  53798241 tataattttttgcaagcgttcactccgttcacaaaagtgtgtaccccaaaggcacacccttggaagtgatatcccacatatataaacactactagagtgt 53798340  T
Q  401 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagt 500  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  53798341 gtgatctacccaatgtaggacataaaattttcaattcacactttacactagtttctccattcttgtgtttacattccaaaggctccacaaaccaactagt 53798440  T
Q  501 atactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    ||||||||||       || ||||||||| |||||||||||    
T  53798441 atactccaagttttttccaatatacactaatgttccaacaa 53798481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 173; E-Value: 2e-92
Query Start/End: Original strand, 301 - 541
Target Start/End: Original strand, 41393772 - 41394010
Alignment:
Q  301 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgt 400  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||  | ||||||||||||||||||||||||||    
T  41393772 tataatttttggcaagcgctcactccgttcacaaaagtgggtaccccaagggcacacccttggaagtgat--cacacatatataaacactactagagtgt 41393869  T
Q  401 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagt 500  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| | ||||||||    
T  41393870 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttttccatccttgtgtttacattccaaaggcttcacataacaactagt 41393969  T
Q  501 atactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    ||||||||||       || |||||||||||||||||||||    
T  41393970 atactccaagtttttgccaatatacactagtgttccaacaa 41394010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 301 - 541
Target Start/End: Original strand, 13711282 - 13711522
Alignment:
Q  301 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgt 400  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||    
T  13711282 tataatttttggctagcgctcactccgttcacaaaagtgggtaccccaagggcacacccttggaagtgatttcccacatatataaacactactagagtgt 13711381  T
Q  401 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagt 500  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| | |||| || | ||||||||    
T  13711382 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctacatcattgtgtttacattccaatgtctcctcataacaactagt 13711481  T
Q  501 atactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    ||||||||||       || |||||||||||||||||||||    
T  13711482 atactccaagtttttgccaatatacactagtgttccaacaa 13711522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 164; E-Value: 4e-87
Query Start/End: Original strand, 301 - 541
Target Start/End: Complemental strand, 9763508 - 9763268
Alignment:
Q  301 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgt 400  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||  |||||||||||| |||||||||| ||||||||||||||||||||||||    
T  9763508 tataatttttggctagcgctcactccgttcacaaaagtgggtaccccaagggcacacccttggaggtgatatccctcatatataaacactactagagtgt 9763409  T
Q  401 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagt 500  Q
    ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||| ||||||| | ||||||||    
T  9763408 gtgatctactcaatgtgggacataaaattttcaattcatgctttacactagtttctacatccttgtgtttacattccaaagtctccacataacaactagt 9763309  T
Q  501 atactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    ||||||||||       || |||||||||||||||||||||    
T  9763308 atactccaagtttatgccaatatacactagtgttccaacaa 9763268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 301 - 540
Target Start/End: Complemental strand, 51018940 - 51018702
Alignment:
Q  301 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgt 400  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  51018940 tataatttttggctagcgctcactccgttcacaaaagtgcgtaccc-aagggcacacccttggaagtgatatcccacatatataaacactactagagtgt 51018842  T
Q  401 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagt 500  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||| | ||||||||    
T  51018841 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctacatccttgtgtgtacattccaaagtctccacataacaactagt 51018742  T
Q  501 atactccaagnnnnnnncattatacactagtgttccaaca 540  Q
    ||| ||||||       || |||||||||||||| |||||    
T  51018741 atattccaagtttttgccaatatacactagtgtttcaaca 51018702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 301 - 509
Target Start/End: Complemental strand, 47045854 - 47045647
Alignment:
Q  301 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgt 400  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  47045854 tataatttttggctagcgctcactccgttcacaaaagtgggtaccc-aagggcacacccttggaagtgatatcccacatatataaacactactagagtgt 47045756  T
Q  401 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagt 500  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||   || |||||||||||||| || | |||| || | ||||||||    
T  47045755 gtgatctatccaatgtgggacataaaattttcaattcacactttacactagtttctatttcattgtgtttacattctaatgtctcctcataacaactagt 47045656  T
Q  501 atactccaa 509  Q
    |||||||||    
T  47045655 atactccaa 47045647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 307 - 541
Target Start/End: Original strand, 4206960 - 4207193
Alignment:
Q  307 ttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatc 406  Q
    ||||||| |||  |||||| ||||||||||||| ||||||||||  |||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  4206960 ttttggctagcattcactctgttcacaaaagtgggtaccccaagggcacacccttgaaagtgatttcccacatatataaacactactagagtgtgtgatc 4207059  T
Q  407 tacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagtatactc 506  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||| | |||| || | ||||||||||||||    
T  4207060 tacccaatgtgggacataaaattttcaattcacactttacactagtttctacatcattgtg-ttacattccaatgtctcctcataacaactagtatactc 4207158  T
Q  507 caagnnnnnnncattatacactagtgttccaacaa 541  Q
    ||||       || |||||||||||||||||||||    
T  4207159 caagtttttgccaatatacactagtgttccaacaa 4207193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 353 - 541
Target Start/End: Original strand, 13695721 - 13695909
Alignment:
Q  353 cacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagt 452  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13695721 cacacccttggaagtgatttcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagt 13695820  T
Q  453 ttctccatccttgtgtttacattccaaaggctccacaaaccaactagtatactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    |||| |||| ||||||||||||||||| | |||| || | ||||||||||||||||||       || |||||||||||||||||||||    
T  13695821 ttctacatcattgtgtttacattccaatgtctcctcataacaactagtatactccaagtttttgccaatatacactagtgttccaacaa 13695909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 171 - 302
Target Start/End: Original strand, 47833610 - 47833741
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47833610 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 47833709  T
Q  271 aaattctctaataaataggaccggagggagta 302  Q
    ||||||||| ||||||||||||||||||||||    
T  47833710 aaattctcttataaataggaccggagggagta 47833741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 171 - 308
Target Start/End: Original strand, 48336262 - 48336399
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48336262 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 48336361  T
Q  271 aaattctctaataaataggaccggagggagtataattt 308  Q
    ||||| ||| ||||||||||||||||||||||| ||||    
T  48336362 aaattttcttataaataggaccggagggagtattattt 48336399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 172 - 304
Target Start/End: Original strand, 53337370 - 53337502
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  53337370 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttattgacccaa 53337469  T
Q  272 aattctctaataaataggaccggagggagtata 304  Q
    |||||||| ||||||||||||||||||||||||    
T  53337470 aattctcttataaataggaccggagggagtata 53337502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 171 - 302
Target Start/End: Original strand, 3372120 - 3372251
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3372120 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 3372219  T
Q  271 aaattctctaataaataggaccggagggagta 302  Q
    ||||| ||| ||||||||||||||||||||||    
T  3372220 aaattatcttataaataggaccggagggagta 3372251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 389 - 541
Target Start/End: Complemental strand, 8985134 - 8984982
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8985134 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 8985035  T
Q  489 aaaccaactagtatactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    ||||  ||||||||||||||||       ||||||||||||||||||||||||    
T  8985034 aaactcactagtatactccaagtttttttcattatacactagtgttccaacaa 8984982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 389 - 541
Target Start/End: Original strand, 13700876 - 13701028
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13700876 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 13700975  T
Q  489 aaaccaactagtatactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    ||||  ||||||||||||||||       ||||||||||||||||||||||||    
T  13700976 aaactcactagtatactccaagtttttttcattatacactagtgttccaacaa 13701028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 389 - 541
Target Start/End: Complemental strand, 21304682 - 21304530
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21304682 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 21304583  T
Q  489 aaaccaactagtatactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    ||||  ||||||||||||||||       ||||||||||||||||||||||||    
T  21304582 aaactcactagtatactccaagtttttttcattatacactagtgttccaacaa 21304530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 172 - 302
Target Start/End: Complemental strand, 6122023 - 6121893
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6122023 tactacctccggtcctatttataagagaaatttagatcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 6121924  T
Q  272 aattctctaataaataggaccggagggagta 302  Q
    |||||||| ||||||||||||||||||||||    
T  6121923 aattctcttataaataggaccggagggagta 6121893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 172 - 302
Target Start/End: Complemental strand, 20538816 - 20538686
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  20538816 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaaattttgttgacccaa 20538717  T
Q  272 aattctctaataaataggaccggagggagta 302  Q
    |||||||| ||||||||||||||||||||||    
T  20538716 aattctcttataaataggaccggagggagta 20538686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 171 - 304
Target Start/End: Original strand, 3992975 - 3993108
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3992975 atactacctccggtcctatttataagagaaatttcggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 3993074  T
Q  271 aaattctctaataaataggaccggagggagtata 304  Q
    ||||||||| ||||||| ||||||||||||||||    
T  3993075 aaattctcttataaataagaccggagggagtata 3993108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 169 - 302
Target Start/End: Original strand, 7579307 - 7579440
Alignment:
Q  169 atatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacc 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  7579307 atatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgacc 7579406  T
Q  269 caaaattctctaataaataggaccggagggagta 302  Q
    ||||||||||| |||||||| |||||||| ||||    
T  7579407 caaaattctcttataaatagaaccggaggaagta 7579440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 172 - 305
Target Start/End: Original strand, 24704370 - 24704503
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24704370 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacattaacttttgttgacccaa 24704469  T
Q  272 aattctctaataaataggaccggagggagtataa 305  Q
    |||||||| |||||||||| ||||||||||||||    
T  24704470 aattctcttataaataggatcggagggagtataa 24704503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 170 - 310
Target Start/End: Complemental strand, 47838749 - 47838609
Alignment:
Q  170 tatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccc 269  Q
    ||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  47838749 tatactacctccgatcctatttataagagaaatttcggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacca 47838650  T
Q  270 aaaattctctaataaataggaccggagggagtataattttt 310  Q
    |||||||||| ||||||||||||||||||||||| ||||||    
T  47838649 aaaattctcttataaataggaccggagggagtattattttt 47838609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 389 - 541
Target Start/End: Complemental strand, 8980014 - 8979862
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8980014 ctactagagtgtgtgatctacccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 8979915  T
Q  489 aaaccaactagtatactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    ||||  ||||||||||||||||       ||||||||||||||||||||||||    
T  8979914 aaactcactagtatactccaagtttttttcattatacactagtgttccaacaa 8979862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 389 - 541
Target Start/End: Complemental strand, 21299562 - 21299410
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  21299562 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttcttcatccttgtgtttacattccaaaggctccac 21299463  T
Q  489 aaaccaactagtatactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    ||||  ||||||||||||||||       ||||||||||||||||||||||||    
T  21299462 aaactcactagtatactccaagtttttttcattatacactagtgttccaacaa 21299410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 171 - 302
Target Start/End: Original strand, 42797731 - 42797862
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  42797731 atactacctccggtcctatatataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccta 42797830  T
Q  271 aaattctctaataaataggaccggagggagta 302  Q
    ||||||||| ||||||||||||||||||||||    
T  42797831 aaattctcttataaataggaccggagggagta 42797862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 389 - 541
Target Start/End: Original strand, 54991842 - 54991994
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54991842 ctactagagtgtgtgatctatccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 54991941  T
Q  489 aaaccaactagtatactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    ||||  ||||||||||||||||       ||||||||||||||||||||||||    
T  54991942 aaactcactagtatactccaagtttttttcattatacactagtgttccaacaa 54991994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 170 - 304
Target Start/End: Complemental strand, 3904815 - 3904681
Alignment:
Q  170 tatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccc 269  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  3904815 tatactacctccggtcctatttataaaagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaatttttgttgaccc 3904716  T
Q  270 aaaattctctaataaataggaccggagggagtata 304  Q
    |||||||||| ||||||||||||||||||||||||    
T  3904715 aaaattctcttataaataggaccggagggagtata 3904681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 172 - 302
Target Start/End: Original strand, 46797725 - 46797855
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  46797725 tactacctccggttctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatatatcaacttttgttgacccaa 46797824  T
Q  272 aattctctaataaataggaccggagggagta 302  Q
    |||||||| ||||||||||||||||||||||    
T  46797825 aattctcttataaataggaccggagggagta 46797855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 171 - 302
Target Start/End: Complemental strand, 51894713 - 51894582
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  51894713 atactacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaatgtttttggactgaatttttaaccagatacatcaacttttgttgaccca 51894614  T
Q  271 aaattctctaataaataggaccggagggagta 302  Q
    ||||||||| ||||||||||||||||||||||    
T  51894613 aaattctcttataaataggaccggagggagta 51894582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 170 - 303
Target Start/End: Original strand, 33621794 - 33621927
Alignment:
Q  170 tatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccc 269  Q
    |||||||| | |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33621794 tatactactttcggttctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccc 33621893  T
Q  270 aaaattctctaataaataggaccggagggagtat 303  Q
    |||||| ||| |||||||||||||||||||||||    
T  33621894 aaaattatcttataaataggaccggagggagtat 33621927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 172 - 305
Target Start/End: Original strand, 52756675 - 52756808
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    ||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52756675 tactatctccggtcctatttataagagaaatttaggtcaacataagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 52756774  T
Q  272 aattctctaataaataggaccggagggagtataa 305  Q
    |||||| | ||||||||||||| |||||||||||    
T  52756775 aattcttttataaataggaccgaagggagtataa 52756808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 171 - 307
Target Start/End: Original strand, 43900548 - 43900684
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  43900548 atactccctccggtcctatttataagagaaatttaggtcaacaaaagtaaatgtatttggactgaatttttaactagatacatcaacttttgttaaccca 43900647  T
Q  271 aaattctctaataaataggaccggagggagtataatt 307  Q
    ||||||||| ||||||||||||||||| |||| ||||    
T  43900648 aaattctcttataaataggaccggaggaagtaaaatt 43900684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 389 - 541
Target Start/End: Original strand, 36354561 - 36354711
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  36354561 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgttaacattccaaaggctccac 36354660  T
Q  489 aaaccaactagtatactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    |||   ||||||||||||||||       ||||||||||||||||||||||||    
T  36354661 aaattcactagtatactccaag--tttttcattatacactagtgttccaacaa 36354711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 389 - 541
Target Start/End: Original strand, 39999488 - 39999639
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  39999488 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttatgtttacatgccaaaggctccac 39999587  T
Q  489 aaaccaactagtatactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    ||||  ||||||||||||||||       ||||||||||||||||||||||||    
T  39999588 aaactcactagtatactccaag-ttttttcattatacactagtgttccaacaa 39999639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 389 - 541
Target Start/End: Original strand, 54343622 - 54343773
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  54343622 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttatgtttacatgccaaaggctccac 54343721  T
Q  489 aaaccaactagtatactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    ||||  ||||||||||||||||       ||||||||||||||||||||||||    
T  54343722 aaactcactagtatactccaag-ttttttcattatacactagtgttccaacaa 54343773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 389 - 541
Target Start/End: Original strand, 54348776 - 54348927
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  54348776 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttatgtttacatgccaaaggctccac 54348875  T
Q  489 aaaccaactagtatactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    ||||  ||||||||||||||||       ||||||||||||||||||||||||    
T  54348876 aaactcactagtatactccaag-ttttttcattatacactagtgttccaacaa 54348927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 389 - 540
Target Start/End: Complemental strand, 54990539 - 54990388
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  54990539 ctactagagtgtgtgatctatccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgttaacattccaaaggctccac 54990440  T
Q  489 aaaccaactagtatactccaagnnnnnnncattatacactagtgttccaaca 540  Q
    ||||  ||||||||||||||||       ||||||||| |||||||||||||    
T  54990439 aaactcactagtatactccaagtttttttcattatacattagtgttccaaca 54990388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 389 - 540
Target Start/End: Original strand, 40004446 - 40004596
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  40004446 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttatgtttacatgccaaaggctccac 40004545  T
Q  489 aaaccaactagtatactccaagnnnnnnncattatacactagtgttccaaca 540  Q
    ||||  ||||||||||||||||       |||||||||||||||||||||||    
T  40004546 aaactcactagtatactccaag-ttttttcattatacactagtgttccaaca 40004596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 171 - 303
Target Start/End: Complemental strand, 41469897 - 41469765
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    ||||| ||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |    
T  41469897 atacttccttcggtcctatttataaaagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgaccaa 41469798  T
Q  271 aaattctctaataaataggaccggagggagtat 303  Q
    ||||||||| |||||||||||||||||||||||    
T  41469797 aaattctcttataaataggaccggagggagtat 41469765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 172 - 303
Target Start/End: Original strand, 5986876 - 5987007
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    ||||||||||| | ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  5986876 tactacctccgattctatttataagagaaatataggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 5986975  T
Q  272 aattctctaataaataggaccggagggagtat 303  Q
    |||||||| |||||||||||||||| ||||||    
T  5986976 aattctcttataaataggaccggagagagtat 5987007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 389 - 541
Target Start/End: Original strand, 36359747 - 36359897
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  36359747 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgttaacatttcaaaggctccac 36359846  T
Q  489 aaaccaactagtatactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    ||||  ||||||||||||||||       ||||||||| ||||||||||||||    
T  36359847 aaactcactagtatactccaag--tttttcattatacagtagtgttccaacaa 36359897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 168 - 301
Target Start/End: Complemental strand, 40913323 - 40913190
Alignment:
Q  168 tatatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgac 267  Q
    |||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||     
T  40913323 tatatactccctccggtcctatttataagagaaatttagatcaacaaaagtgaatgtatttggactgaatttttaactggatatatcaacttttgttgat 40913224  T
Q  268 ccaaaattctctaataaataggaccggagggagt 301  Q
    ||||| |||||| |||||||||||||||||||||    
T  40913223 ccaaatttctcttataaataggaccggagggagt 40913190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 184 - 303
Target Start/End: Original strand, 3422073 - 3422191
Alignment:
Q  184 tcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctctaata 283  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  3422073 tcctatttataagagaaatttaggtcaacaaaa-tgaatgtatttgaactgaatttttaactagatacatcaacttttgttgacccaaaattctcttata 3422171  T
Q  284 aataggaccggagggagtat 303  Q
    ||||||||||||||||||||    
T  3422172 aataggaccggagggagtat 3422191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 33551197 - 33551308
Alignment:
Q  168 tatatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgac 267  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||    
T  33551197 tatatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtattttgactgaatttttaactagatacatcaacttttgtaaac 33551296  T
Q  268 ccaaaattctct 279  Q
    ||||||||||||    
T  33551297 ccaaaattctct 33551308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 26231573 - 26231684
Alignment:
Q  168 tatatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgac 267  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||  ||    
T  26231573 tatatactacctccggtcctatttataagagaaatttaggtcaacaaaagcgaatgtatttggactgaatttttaactagatatatcaacttttgtaaac 26231672  T
Q  268 ccaaaattctct 279  Q
    | ||||||||||    
T  26231673 cgaaaattctct 26231684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 184 - 302
Target Start/End: Complemental strand, 41615794 - 41615676
Alignment:
Q  184 tcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctctaata 283  Q
    |||||||||||||||||| |||||| ||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||| ||||  |||||| |||    
T  41615794 tcctatttataagagaaaattaggtcaacaaaagttaatgtatttggacttaatttttaactaaatacatcaacttttgttgatccaattttctcttata 41615695  T
Q  284 aataggaccggagggagta 302  Q
    |||||||||||| ||||||    
T  41615694 aataggaccggatggagta 41615676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 169 - 271
Target Start/End: Original strand, 25855080 - 25855182
Alignment:
Q  169 atatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacc 268  Q
    ||||||| |||| |||||||||||| ||||||| ||  || ||||||||| ||||||||||||||||||||||||| | ||||||| |||||||| ||||    
T  25855080 atatactccctcaggtcctatttatgagagaaagttgagtcaacaaaagttaatgtatttggactgaatttttaaccaaatacatcgacttttgtagacc 25855179  T
Q  269 caa 271  Q
    |||    
T  25855180 caa 25855182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 178 - 303
Target Start/End: Original strand, 17344219 - 17344344
Alignment:
Q  178 ctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 277  Q
    ||||||| |||||||||||||||| |||  | |||||||||  |||||| || |||||||||||||   |||||||||||||||||||| ||||| ||||    
T  17344219 ctccggttctatttataagagaaagttaaatcaacaaaagttgatgtatctgaactgaatttttaatcggatacatcaacttttgttgatccaaatttct 17344318  T
Q  278 ctaataaataggaccggagggagtat 303  Q
    || ||||||| ||  |||||||||||    
T  17344319 cttataaataagattggagggagtat 17344344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 170 - 302
Target Start/End: Original strand, 29845643 - 29845769
Alignment:
Q  170 tatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatc-aacttttgttgacc 268  Q
    |||||| ||| | |||||| ||||||||||||||||||| ||||||| | ||| |||||| |||||||||||||||| ||||||| |||||||||||| |    
T  29845643 tatactcccttcagtcctacttataagagaaatttaggtcaacaaaaattaatatatttgaactgaatttttaacta-atacatcaaacttttgttgatc 29845741  T
Q  269 caaaattctctaataaataggaccggagggagta 302  Q
    |      |||| ||||||||||||||||||||||    
T  29845742 c------ctcttataaataggaccggagggagta 29845769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 187 - 289
Target Start/End: Complemental strand, 50430533 - 50430431
Alignment:
Q  187 tatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctctaataaat 286  Q
    |||||||||||| || || ||| |||||||||  ||||||||||| |||||||||||| ||||||||||| |||||||||||||||  | ||| ||||||    
T  50430533 tatttataagagcaagttgggtcaacaaaagttgatgtatttggattgaatttttaaccagatacatcaatttttgttgacccaaatatatcttataaat 50430434  T
Q  287 agg 289  Q
    |||    
T  50430433 agg 50430431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 235 - 302
Target Start/End: Original strand, 4780358 - 4780425
Alignment:
Q  235 aatttttaactagatacatcaacttttgttgacccaaaattctctaataaataggaccggagggagta 302  Q
    |||||||||  |||||||| |||||||||||||| ||| |||||| ||||||||||||||||||||||    
T  4780358 aatttttaatcagatacattaacttttgttgaccaaaatttctcttataaataggaccggagggagta 4780425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 300
Target Start/End: Original strand, 44900080 - 44900208
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    |||| ||||||||||||||||||||||| |||  ||| |||||||||  || ||| ||| |  | | |||||| |||||| ||||||||||||||||||     
T  44900080 tactccctccggtcctatttataagagatattctggtcaacaaaagttgatatatctggtccaattgtttaaccagatacgtcaacttttgttgacccag 44900179  T
Q  272 aattctctaataaataggaccggagggag 300  Q
    |   ||||  |||||||||||||||||||    
T  44900180 acgactctcgtaaataggaccggagggag 44900208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 248 - 303
Target Start/End: Original strand, 17236864 - 17236919
Alignment:
Q  248 atacatcaacttttgttgacccaaaattctctaataaataggaccggagggagtat 303  Q
    ||||||||||||||||||||||||| || ||| |||||||||||||||| ||||||    
T  17236864 atacatcaacttttgttgacccaaatttttcttataaataggaccggagagagtat 17236919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 172 - 303
Target Start/End: Complemental strand, 43900679 - 43900548
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    |||| |||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | | ||||||  ||||||||||||| ||    
T  43900679 tacttcctccggtcctatttataagagaattttgggttaacaaaagttgatgtatctagttaaaaattcagtccaaatacatttacttttgttgacctaa 43900580  T
Q  272 aattctctaataaataggaccggagggagtat 303  Q
    | |||||| |||||||||||||||||||||||    
T  43900579 atttctcttataaataggaccggagggagtat 43900548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 4780425 - 4780371
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtat 226  Q
    |||| |||||||||||||||||||||||||||| ||| ||||||||| |||||||    
T  4780425 tactccctccggtcctatttataagagaaattttggtcaacaaaagttaatgtat 4780371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 45478151 - 45478217
Alignment:
Q  231 actgaatttttaactagatacatcaacttttgttgacccaaaattctctaataaataggaccggagg 297  Q
    ||||||||||||||  ||||||||||||||| |||||||| | |||||| |||||||||| ||||||    
T  45478151 actgaatttttaaccggatacatcaacttttattgacccacatttctcttataaataggatcggagg 45478217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 268
Target Start/End: Original strand, 31013036 - 31013117
Alignment:
Q  187 tatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacc 268  Q
    ||||||||| ||| |||||| | |||||||||  ||||||||||  | |||| |||||||||||||||| ||||||||||||    
T  31013036 tatttataaaagacatttagatcaacaaaagtagatgtatttggtttaaattcttaactagatacatcatcttttgttgacc 31013117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 272
Target Start/End: Original strand, 9876653 - 9876739
Alignment:
Q  186 ctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaa-tttttaactagatacatcaacttttgttgacccaaa 272  Q
    |||||||||||||||||||| |||||||||| | ||||||| | |||| || |||||||| | |||||| || |||||||||||||||    
T  9876653 ctatttataagagaaatttacgttaacaaaatttaatgtatct-gactcaattttttaaccaaatacataaatttttgttgacccaaa 9876739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 244
Target Start/End: Complemental strand, 17236912 - 17236845
Alignment:
Q  178 ctccggtcctatttataagagaaatttaggttaacaaaagtgaatgta-tttggactgaatttttaac 244  Q
    |||||||||||||||||||| |||||| ||| |||||||||  ||||| ||| |||||||||||||||    
T  17236912 ctccggtcctatttataagaaaaatttgggtcaacaaaagttgatgtattttagactgaatttttaac 17236845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 42797862 - 42797816
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    |||| |||||||||||||||||||||||| ||||||| |||||||||    
T  42797862 tactccctccggtcctatttataagagaattttaggtcaacaaaagt 42797816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 309
Target Start/End: Complemental strand, 47833741 - 47833604
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    |||| |||||||||||||||||||||||| ||| ||| |||||||||  |||||| | |    || ||    | | ||||||  ||||||||||||| ||    
T  47833741 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 47833642  T
Q  272 aattctctaataaataggaccggagggagtataatttt 309  Q
    | |||||| ||||||||||||||||| ||||| |||||    
T  47833641 atttctcttataaataggaccggaggtagtattatttt 47833604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 1716357 - 1716301
Alignment:
Q  246 agatacatcaacttttgttgacccaaaattctctaataaataggaccggagggagta 302  Q
    ||||||||||||||||||||||| ||   ||||| ||||||| ||||||||||||||    
T  1716357 agatacatcaacttttgttgaccaaattatctcttataaataagaccggagggagta 1716301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 305
Target Start/End: Original strand, 3904680 - 3904816
Alignment:
Q  169 atatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacc 268  Q
    ||||||| |||||||||||||||||||||||| ||| ||| ||||||| |  |||||||| |    || ||    | | ||||||  |||||||||||||    
T  3904680 atatactccctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacc 3904779  T
Q  269 caaaattctctaataaataggaccggagggagtataa 305  Q
     ||| |||| | ||||||||||||||||| |||||||    
T  3904780 taaatttcttttataaataggaccggaggtagtataa 3904816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 307 - 351
Target Start/End: Original strand, 4206071 - 4206115
Alignment:
Q  307 ttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagc 351  Q
    ||||||| ||||||||||| ||||||||||||| |||||||||||    
T  4206071 ttttggctagcgctcactctgttcacaaaagtgggtaccccaagc 4206115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 226
Target Start/End: Complemental strand, 24704502 - 24704446
Alignment:
Q  170 tatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtat 226  Q
    |||||| |||||| ||||||||||||||||| ||| ||| ||||||||| |||||||    
T  24704502 tatactccctccgatcctatttataagagaattttgggtcaacaaaagttaatgtat 24704446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 248 - 304
Target Start/End: Complemental strand, 25855137 - 25855081
Alignment:
Q  248 atacatcaacttttgttgacccaaaattctctaataaataggaccggagggagtata 304  Q
    |||||| ||||||||||||| |||  |||||| |||||||||||| |||||||||||    
T  25855137 atacattaacttttgttgactcaactttctctcataaataggacctgagggagtata 25855081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 256 - 304
Target Start/End: Complemental strand, 33551247 - 33551199
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagtata 304  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| ||||||    
T  33551247 acttttgttgacctaaatttctcttataaataggaccggaggtagtata 33551199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 256 - 304
Target Start/End: Original strand, 40913273 - 40913321
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagtata 304  Q
    ||||||||||| | ||| |||||| ||||||||||||||||||||||||    
T  40913273 acttttgttgatctaaatttctcttataaataggaccggagggagtata 40913321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 44900136 - 44900080
Alignment:
Q  246 agatacatcaacttttgttgacccaaaattctctaataaataggaccggagggagta 302  Q
    ||||| |||||||||||||||||  ||  ||||| ||||||||||||||||||||||    
T  44900136 agatatatcaacttttgttgaccagaatatctcttataaataggaccggagggagta 44900080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 256 - 303
Target Start/End: Complemental strand, 3372167 - 3372120
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagtat 303  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| |||||    
T  3372167 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 3372120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 218
Target Start/End: Complemental strand, 3422191 - 3422144
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    ||||| |||||||||||||||||||||||| ||| ||| |||||||||    
T  3422191 atactccctccggtcctatttataagagaattttgggtcaacaaaagt 3422144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 303
Target Start/End: Complemental strand, 3993110 - 3992975
Alignment:
Q  168 tatatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgac 267  Q
    |||||||| ||||||||| |||||||||||||| ||| ||| |||||||||  |||||| | |    || ||    | | ||||||  ||||||||||||    
T  3993110 tatatactccctccggtcttatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgac 3993011  T
Q  268 ccaaaattctctaataaataggaccggagggagtat 303  Q
    | ||| |||||| ||||||||||||||||| |||||    
T  3993010 cgaaatttctcttataaataggaccggaggtagtat 3992975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 262
Target Start/End: Complemental strand, 6924802 - 6924724
Alignment:
Q  183 gtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttg 262  Q
    ||||||| ||||||| ||| |||||| ||||||||| ||||||||||| || |||||| ||  |||| ||||||||||||    
T  6924802 gtcctatatataaga-aaagttaggtcaacaaaagttaatgtatttggtctaaattttgaatcagatgcatcaacttttg 6924724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 257 - 304
Target Start/End: Complemental strand, 26231622 - 26231575
Alignment:
Q  257 cttttgttgacccaaaattctctaataaataggaccggagggagtata 304  Q
    |||||||||||| ||| |||||| ||||||||||||||||| ||||||    
T  26231622 cttttgttgacctaaatttctcttataaataggaccggaggtagtata 26231575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 218
Target Start/End: Original strand, 41469765 - 41469812
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    ||||| |||||||||||||||||||||||| ||| ||| |||||||||    
T  41469765 atactccctccggtcctatttataagagaatttttggtcaacaaaagt 41469812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 310
Target Start/End: Original strand, 47838616 - 47838755
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    ||||| |||||||||||||||||||||||| ||| ||| |||||||||  |||||| | |    || ||    | | ||||||  ||||||||||||| |    
T  47838616 atactccctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccga 47838715  T
Q  271 aaattctctaataaataggaccggagggagtataattttt 310  Q
    || |||||| |||||||||| |||||| ||||||| ||||    
T  47838716 aatttctcttataaataggatcggaggtagtataaatttt 47838755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 256 - 303
Target Start/End: Complemental strand, 48336309 - 48336262
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagtat 303  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| |||||    
T  48336309 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 48336262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 5987000 - 5986950
Alignment:
Q  178 ctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtattt 228  Q
    ||||||||||||||||||||||| ||| ||| |||||||||  ||||||||    
T  5987000 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtattt 5986950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 6121893 - 6121939
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    |||| |||||||||||||||||||||||| ||| ||| |||||||||    
T  6121893 tactccctccggtcctatttataagagaattttgggtcaacaaaagt 6121939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 20538770 - 20538816
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagta 302  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| ||||    
T  20538770 acttttgttgacctaaatttctcttataaataggaccggaggtagta 20538816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 256 - 302
Target Start/End: Complemental strand, 24704416 - 24704370
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagta 302  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| ||||    
T  24704416 acttttgttgacctaaatttctcttataaataggaccggaggtagta 24704370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 293
Target Start/End: Complemental strand, 43095336 - 43095230
Alignment:
Q  187 tatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctctaataaat 286  Q
    ||||||||||||| ||||| || ||||||| | ||||||| ||| |  |||||| ||| | |||||| || |||||||| ||||||  ||||| ||||||    
T  43095336 tatttataagagatatttaagtcaacaaaaattaatgtatctggtccaaattttgaaccatatacattaatttttgttggcccaaacgtctcttataaat 43095237  T
Q  287 aggaccg 293  Q
    | |||||    
T  43095236 aagaccg 43095230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 46797855 - 46797809
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    |||| |||||||||||||||||||||||| ||| ||| |||||||||    
T  46797855 tactccctccggtcctatttataagagaattttgggtcaacaaaagt 46797809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 51894582 - 51894628
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    |||| |||||||||||||||||||||||| ||| ||| |||||||||    
T  51894582 tactccctccggtcctatttataagagaattttgggtcaacaaaagt 51894628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 256 - 302
Target Start/End: Complemental strand, 53337416 - 53337370
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagta 302  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| ||||    
T  53337416 acttttgttgacctaaatttctcttataaataggaccggaggtagta 53337370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 218
Target Start/End: Original strand, 40913194 - 40913235
Alignment:
Q  177 cctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    |||||||||||||||||||||||||||| | | |||||||||    
T  40913194 cctccggtcctatttataagagaaatttggatcaacaaaagt 40913235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 271
Target Start/End: Original strand, 41594660 - 41594753
Alignment:
Q  178 ctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    ||||||||| |  ||||||||||| || ||| |||||||||  |||||| ||| |  |||||| ||| ||||||||||||||  ||||||||||    
T  41594660 ctccggtcccacatataagagaaagttgggtcaacaaaagttgatgtatatggtccaaattttgaaccagatacatcaacttaagttgacccaa 41594753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 53337503 - 53337454
Alignment:
Q  169 atatactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    ||||||| |||||||||||||||||||||||| ||| ||| || ||||||    
T  53337503 atatactccctccggtcctatttataagagaattttgggtcaataaaagt 53337454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 172; Significance: 6e-92; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 172; E-Value: 6e-92
Query Start/End: Original strand, 316 - 540
Target Start/End: Complemental strand, 8754 - 8530
Alignment:
Q  316 gcgctcactccgttcacaaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatg 415  Q
    |||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8754 gcgctcactccgttcacaaaagtgggtaccccaagggcacacccttgaaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatg 8655  T
Q  416 tgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagtatactccaagnnnnn 515  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||         
T  8654 tgggacataaaattttaaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacataacaactagtatactccaagttttt 8555  T
Q  516 nncattatacactagtgttccaaca 540  Q
      || ||||||||||||||||||||    
T  8554 gccaatatacactagtgttccaaca 8530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 171; Significance: 2e-91; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 337 - 540
Target Start/End: Complemental strand, 4163094 - 4162891
Alignment:
Q  337 gtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaaattttcaatt 436  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4163094 gtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaaattttcaatt 4162995  T
Q  437 cacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagtatactccaagnnnnnnncattatacactagtgttcc 536  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||||    
T  4162994 cacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagtatactccaagttttttccattatacaccagtgttcc 4162895  T
Q  537 aaca 540  Q
    ||||    
T  4162894 aaca 4162891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 353 - 538
Target Start/End: Complemental strand, 28751204 - 28751019
Alignment:
Q  353 cacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagt 452  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28751204 cacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagt 28751105  T
Q  453 ttctccatccttgtgtttacattccaaaggctccacaaaccaactagtatactccaagnnnnnnncattatacactagtgttccaa 538  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||       || ||||||||||||||||||    
T  28751104 ttctccatccttgtgtttacattccaaaggctccacataacaactagtatactccaagtttttgccaatatacactagtgttccaa 28751019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 170 - 303
Target Start/End: Original strand, 3055556 - 3055689
Alignment:
Q  170 tatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccc 269  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3055556 tatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccc 3055655  T
Q  270 aaaattctctaataaataggaccggagggagtat 303  Q
    |||||||||| |||||||||||||||||||||||    
T  3055656 aaaattctcttataaataggaccggagggagtat 3055689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 171 - 304
Target Start/End: Original strand, 44398685 - 44398818
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44398685 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 44398784  T
Q  271 aaattctctaataaataggaccggagggagtata 304  Q
    ||||||||| ||||||||||||||||||||||||    
T  44398785 aaattctcttataaataggaccggagggagtata 44398818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 125; E-Value: 7e-64
Query Start/End: Original strand, 170 - 302
Target Start/End: Original strand, 15896840 - 15896972
Alignment:
Q  170 tatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccc 269  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15896840 tatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccc 15896939  T
Q  270 aaaattctctaataaataggaccggagggagta 302  Q
    |||||||||| ||||||||||||||||||||||    
T  15896940 aaaattctcttataaataggaccggagggagta 15896972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 125; E-Value: 7e-64
Query Start/End: Original strand, 171 - 303
Target Start/End: Complemental strand, 37990144 - 37990012
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37990144 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 37990045  T
Q  271 aaattctctaataaataggaccggagggagtat 303  Q
    ||||||||| |||||||||||||||||||||||    
T  37990044 aaattctcttataaataggaccggagggagtat 37990012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 125; E-Value: 7e-64
Query Start/End: Original strand, 171 - 303
Target Start/End: Complemental strand, 41478770 - 41478638
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41478770 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 41478671  T
Q  271 aaattctctaataaataggaccggagggagtat 303  Q
    ||||||||| |||||||||||||||||||||||    
T  41478670 aaattctcttataaataggaccggagggagtat 41478638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 172 - 302
Target Start/End: Complemental strand, 13197840 - 13197710
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13197840 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 13197741  T
Q  272 aattctctaataaataggaccggagggagta 302  Q
    |||||||| ||||||||||||||||||||||    
T  13197740 aattctcttataaataggaccggagggagta 13197710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 171 - 304
Target Start/End: Original strand, 44397546 - 44397679
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44397546 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 44397645  T
Q  271 aaattctctaataaataggaccggagggagtata 304  Q
    ||||||||| |||||||||||||| |||||||||    
T  44397646 aaattctcttataaataggaccggggggagtata 44397679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 171 - 305
Target Start/End: Complemental strand, 38917653 - 38917519
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    ||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38917653 atactacctccggtcctatttataagataaatttaggtcaataaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 38917554  T
Q  271 aaattctctaataaataggaccggagggagtataa 305  Q
    ||||||||| |||||||||||||||||||||||||    
T  38917553 aaattctcttataaataggaccggagggagtataa 38917519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 172 - 309
Target Start/End: Complemental strand, 6648649 - 6648512
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    ||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6648649 tactacctccggtcctatttataagagaaatttaggtcaacataaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 6648550  T
Q  272 aattctctaataaataggaccggagggagtataatttt 309  Q
    |||||||| ||||||||||||||||||||||| |||||    
T  6648549 aattctcttataaataggaccggagggagtattatttt 6648512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 168 - 308
Target Start/End: Complemental strand, 16243917 - 16243777
Alignment:
Q  168 tatatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgac 267  Q
    ||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16243917 tatatactatctccggtcctatttataagaaaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgac 16243818  T
Q  268 ccaaaattctctaataaataggaccggagggagtataattt 308  Q
    |||||||||||| ||||||||||||||| ||||||| ||||    
T  16243817 ccaaaattctcttataaataggaccggatggagtattattt 16243777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 172 - 303
Target Start/End: Complemental strand, 37666740 - 37666609
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  37666740 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgaactgaatttttaactagatacatcaactttagttgacccaa 37666641  T
Q  272 aattctctaataaataggaccggagggagtat 303  Q
    |||||||| |||||||||||||||||||||||    
T  37666640 aattctcttataaataggaccggagggagtat 37666609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 171 - 305
Target Start/End: Original strand, 13344483 - 13344617
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  13344483 atactacctccggttctatttataagagaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgatcca 13344582  T
Q  271 aaattctctaataaataggaccggagggagtataa 305  Q
    ||||||||| |||||||||||||||||||||||||    
T  13344583 aaattctcttataaataggaccggagggagtataa 13344617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 172 - 302
Target Start/End: Complemental strand, 16044447 - 16044317
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  16044447 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgaactgaatttttaactagatacatcaactttagttgacccaa 16044348  T
Q  272 aattctctaataaataggaccggagggagta 302  Q
    |||||||| ||||||||||||||||||||||    
T  16044347 aattctcttataaataggaccggagggagta 16044317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 171 - 308
Target Start/End: Original strand, 15372225 - 15372362
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    ||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  15372225 atactccctccagtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaacgagatacatcaacttttgttgaccca 15372324  T
Q  271 aaattctctaataaataggaccggagggagtataattt 308  Q
    ||||||||| |||||||||||||||||||||| |||||    
T  15372325 aaattctcttataaataggaccggagggagtaaaattt 15372362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 171 - 303
Target Start/End: Complemental strand, 9047886 - 9047754
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||| |||||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9047886 atactatctccggtcatatttataagagaaatttaggtcaaaaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 9047787  T
Q  271 aaattctctaataaataggaccggagggagtat 303  Q
    ||||||||| |||||||||||||||||||||||    
T  9047786 aaattctcttataaataggaccggagggagtat 9047754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 169 - 305
Target Start/End: Complemental strand, 30099315 - 30099179
Alignment:
Q  169 atatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacc 268  Q
    |||| ||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  30099315 atattctacctccgatcctatttataagagaaatttaggtcaacaaaaatgaatgtatttggattgaatttttaattagatacatcaacttttgttgacc 30099216  T
Q  269 caaaattctctaataaataggaccggagggagtataa 305  Q
    |||||||||||||||||||||||||||||||||||||    
T  30099215 caaaattctctaataaataggaccggagggagtataa 30099179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 172 - 302
Target Start/End: Complemental strand, 12338067 - 12337937
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    ||||||||||||| |||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12338067 tactacctccggttctatttataagaaaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 12337968  T
Q  272 aattctctaataaataggaccggagggagta 302  Q
    |||||||| ||||||||||||||||||||||    
T  12337967 aattctcttataaataggaccggagggagta 12337937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 389 - 540
Target Start/End: Original strand, 40392685 - 40392836
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  40392685 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttatgtttacattgcaaaggctccac 40392784  T
Q  489 aaaccaactagtatactccaagnnnnnnncattatacactagtgttccaaca 540  Q
    ||||  ||||||||||||||||       |||||||||||||||||||||||    
T  40392785 aaactcactagtatactccaagtttttttcattatacactagtgttccaaca 40392836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 389 - 541
Target Start/End: Complemental strand, 42728296 - 42728145
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42728296 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 42728197  T
Q  489 aaaccaactagtatactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    ||||  ||||||| ||||||||       || |||||||||||||||||||||    
T  42728196 aaactcactagtaaactccaag-tttttccaatatacactagtgttccaacaa 42728145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 389 - 540
Target Start/End: Original strand, 44096721 - 44096871
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  44096721 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttttgtttacattccaaatgctccac 44096820  T
Q  489 aaaccaactagtatactccaagnnnnnnncattatacactagtgttccaaca 540  Q
    ||||  ||||||||||||||||       |||||||||||||||||||||||    
T  44096821 aaactcactagtatactccaag-ttttttcattatacactagtgttccaaca 44096871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 389 - 540
Target Start/End: Complemental strand, 44754282 - 44754132
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  44754282 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttatgtttacatgccaaaggctccac 44754183  T
Q  489 aaaccaactagtatactccaagnnnnnnncattatacactagtgttccaaca 540  Q
    ||||  ||||||||||||||||       |||||||||||||||||||||||    
T  44754182 aaactcactagtatactccaag-ttttttcattatacactagtgttccaaca 44754132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 389 - 509
Target Start/End: Complemental strand, 42723127 - 42723007
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42723127 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 42723028  T
Q  489 aaaccaactagtatactccaa 509  Q
    ||||  ||||||| |||||||    
T  42723027 aaactcactagtaaactccaa 42723007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 389 - 541
Target Start/End: Complemental strand, 44759448 - 44759297
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||    
T  44759448 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactaatttctccatccttatgtttacatgccaaaggctccac 44759349  T
Q  489 aaaccaactagtatactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    ||||  ||||||||||||||||       ||||||||||||||||||||||||    
T  44759348 aaactcactagtatactccaag-ttttttcattatacactagtgttccaacaa 44759297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 183 - 303
Target Start/End: Complemental strand, 41493015 - 41492895
Alignment:
Q  183 gtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctctaat 282  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||    
T  41493015 gtcctatttataaaagaaatttaggtcaacaaaagtgaatgtatttggacagaatttttaactagatacatcaacttttgttgacccaaatttctcttat 41492916  T
Q  283 aaataggaccggagggagtat 303  Q
    |||||||||||||||||||||    
T  41492915 aaataggaccggagggagtat 41492895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 389 - 507
Target Start/End: Original strand, 40520003 - 40520122
Alignment:
Q  389 ctactagagtgtgtgatctaccca-atgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctcca 487  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40520003 ctactagagtgtgtgatctaccccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctcca 40520102  T
Q  488 caaaccaactagtatactcc 507  Q
    |||||  |||||||||||||    
T  40520103 caaactcactagtatactcc 40520122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 4684066 - 4683955
Alignment:
Q  168 tatatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgac 267  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  4684066 tatatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgtaaac 4683967  T
Q  268 ccaaaattctct 279  Q
    | ||||||||||    
T  4683966 cgaaaattctct 4683955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 389 - 510
Target Start/End: Complemental strand, 40518197 - 40518075
Alignment:
Q  389 ctactagagtgtgtgatctaccca-atgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctcca 487  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  40518197 ctactagagtgtgtgatctaccccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttatattccaaaggctcca 40518098  T
Q  488 caaaccaactagtatactccaag 510  Q
    |||||  |||| |||||||||||    
T  40518097 caaactcactattatactccaag 40518075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 172 - 311
Target Start/End: Complemental strand, 12170529 - 12170390
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    |||| |||||| ||||||||| |||||||| |||||| || |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12170529 tactccctccgatcctatttacaagagaaaattaggtcaataaaagttaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 12170430  T
Q  272 aattctctaataaataggaccggagggagtataatttttg 311  Q
      |||||| ||||||| || |||| | ||||| |||||||    
T  12170429 gtttctcttataaataagatcggatgaagtattatttttg 12170390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 200 - 299
Target Start/End: Complemental strand, 44804680 - 44804581
Alignment:
Q  200 aatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctctaataaataggaccggaggga 299  Q
    ||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||| |||||||||||||||||||    
T  44804680 aatttaggtcaacataaatgaatgtatttggactgaatttttaactagatacatcaacttttgttaacttaaaattctcttataaataggaccggaggga 44804581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 191 - 299
Target Start/End: Original strand, 16734802 - 16734910
Alignment:
Q  191 tataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctctaataaatagga 290  Q
    ||||||||||| || ||| |||||||||  |||||| ||||||||||||||||| | ||||||||||||||||| || |||  |||||| ||||||||||    
T  16734802 tataagagaaagtttggtcaacaaaagttgatgtatctggactgaatttttaaccaaatacatcaacttttgtttactcaactttctcttataaatagga 16734901  T
Q  291 ccggaggga 299  Q
    | |||||||    
T  16734902 ctggaggga 16734910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 171 - 271
Target Start/End: Complemental strand, 30852748 - 30852648
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    ||||| ||||||||||||||||||||||||| |||| |||| ||||||  |||||| | |||||||| || ||  |||||||| ||||||||||| ||||    
T  30852748 atactccctccggtcctatttataagagaaagttagattaataaaagtttatgtatctagactgaatattgaatcagatacataaacttttgttgtccca 30852649  T
Q  271 a 271  Q
    |    
T  30852648 a 30852648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 31150659 - 31150769
Alignment:
Q  178 ctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 277  Q
    ||||| |||||||||||||||||| ||  || |||||||||  ||||||||||||| ||||||||||||||||||      ||||||||||||   ||||    
T  31150659 ctccgatcctatttataagagaaagttgcgtcaacaaaagtttatgtatttggactaaatttttaactagataca-----atttgttgacccatgtttct 31150753  T
Q  278 ctaataaataggaccg 293  Q
    || |||||||||||||    
T  31150754 cttataaataggaccg 31150769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 302
Target Start/End: Complemental strand, 13724221 - 13724102
Alignment:
Q  183 gtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctctaat 282  Q
    |||||||||||||| || |||  ||| |||||||||  |||||| ||| |  | |||||||| | ||||||||||||||||||||| | |  |||||  |    
T  13724221 gtcctatttataagcgatattctggtcaacaaaagttgatgtatctggtccaattttttaaccaaatacatcaacttttgttgacctagatgtctcttgt 13724122  T
Q  283 aaataggaccggagggagta 302  Q
    ||||||||||||||||||||    
T  13724121 aaataggaccggagggagta 13724102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 41453090 - 41453149
Alignment:
Q  203 ttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttg 262  Q
    |||||| || |||||| ||||||||||||||||||||||||| | |||||||||||||||    
T  41453090 ttaggtcaataaaagttaatgtatttggactgaatttttaacaaaatacatcaacttttg 41453149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 182 - 267
Target Start/End: Original strand, 36688892 - 36688977
Alignment:
Q  182 ggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgac 267  Q
    |||||||||||||||||||| || ||| |||||| ||  |||||| | | ||||||||| ||| ||||||||||| ||||||||||    
T  36688892 ggtcctatttataagagaaagtttggtcaacaaacgttgatgtatcttgtctgaattttaaacaagatacatcaatttttgttgac 36688977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 4163221 - 4163181
Alignment:
Q  32 acgtgtgagacttggtctccgtgtgcgggaatctcggagca 72  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  4163221 acgtgtgagacttggtctccgcgtgcgggaatctcggagca 4163181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 303
Target Start/End: Original strand, 13724097 - 13724233
Alignment:
Q  167 ttatatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttga 266  Q
    |||| |||| |||||||||||||||| |||||| || ||||| |||||||||  ||||||||||    ||  ||  || |||||||||||||||||||||    
T  13724097 ttatgtactccctccggtcctatttacaagagacatctaggtcaacaaaagttgatgtatttggttaaaaaattggaccagatacatcaacttttgttga 13724196  T
Q  267 cccaaaattctctaataaataggaccggagggagtat 303  Q
    ||  ||  || || ||||||||||| | |||||||||    
T  13724197 ccagaatatcgcttataaataggactgtagggagtat 13724233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 308
Target Start/End: Complemental strand, 15896972 - 15896836
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    |||| |||||||||||||||||||||||| ||| ||| |||||||||  |||||| | |    || ||    | | ||||||  ||||||||||||| ||    
T  15896972 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 15896873  T
Q  272 aattctctaataaataggaccggagggagtataattt 308  Q
    | |||||| ||||||||||||||||| ||||||||||    
T  15896872 atttctcttataaataggaccggaggtagtataattt 15896836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 303
Target Start/End: Complemental strand, 23227391 - 23227271
Alignment:
Q  183 gtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctctaat 282  Q
    ||||||||||||||||| |||| ||| |||||||||  |||||||||| |  |||| |||   ||||||||||  ||||||||||| |||  | ||| ||    
T  23227391 gtcctatttataagagacattttggtcaacaaaagttgatgtatttggtccaaattcttagtcagatacatcacattttgttgacctaaatatttcttat 23227292  T
Q  283 aaataggaccggagggagtat 303  Q
    ||||| |||| ||||||||||    
T  23227291 aaatatgaccagagggagtat 23227271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 28751382 - 28751342
Alignment:
Q  32 acgtgtgagacttggtctccgtgtgcgggaatctcggagca 72  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  28751382 acgtgtgagacttggtctccgcgtgcgggaatctcggagca 28751342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 218
Target Start/End: Original strand, 41492895 - 41492942
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    ||||| |||||||||||||||||||||||||||| ||| |||||||||    
T  41492895 atactccctccggtcctatttataagagaaatttgggtcaacaaaagt 41492942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 303
Target Start/End: Complemental strand, 44398819 - 44398685
Alignment:
Q  169 atatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacc 268  Q
    ||||||| |||||||||||||||||||||||| ||| ||| |||||||||  |||||| | |    || ||    | | ||||||  |||||||||||||    
T  44398819 atatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacc 44398720  T
Q  269 caaaattctctaataaataggaccggagggagtat 303  Q
     ||| |||||| ||||||||||||||||| |||||    
T  44398719 taaatttctcttataaataggaccggaggtagtat 44398685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 304
Target Start/End: Complemental strand, 3055689 - 3055556
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    ||||| |||||||||||||||||||||||| ||| ||| |||||||||  |||||| | |    || ||    | | ||||||  ||||||||||||| |    
T  3055689 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 3055590  T
Q  271 aaattctctaataaataggaccggagggagtata 304  Q
    || |||||| ||||||||||||||||| ||||||    
T  3055589 aatttctcttataaataggaccggaggtagtata 3055556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 218
Target Start/End: Original strand, 44804583 - 44804624
Alignment:
Q  177 cctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  44804583 cctccggtcctatttataagagaattttaagttaacaaaagt 44804624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 256 - 304
Target Start/End: Original strand, 4684016 - 4684064
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagtata 304  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| ||||||    
T  4684016 acttttgttgacctaaatttctcttataaataggaccggaggtagtata 4684064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 308
Target Start/End: Complemental strand, 15372356 - 15372220
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    |||| |||||||||||||||||||||||| ||| ||| |||||||||  |||||| | |    || ||    | | ||||||  ||||||||||||| ||    
T  15372356 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctcgttaaaaattcagtccaaatacattcacttttgttgacctaa 15372257  T
Q  272 aattctctaataaataggaccggagggagtataattt 308  Q
    | |||||| ||||||||||| ||||||||||| ||||    
T  15372256 atttctcttataaataggactggagggagtattattt 15372220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 303
Target Start/End: Original strand, 37990012 - 37990144
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    ||||| |||||||||||||||||||||||| ||| ||| |||||||||  |||||| | |    || ||    | | ||||||  ||||||||||||| |    
T  37990012 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 37990111  T
Q  271 aaattctctaataaataggaccggagggagtat 303  Q
    || |||||| ||||||||||||||||| |||||    
T  37990112 aatttctcttataaataggaccggaggtagtat 37990144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 218
Target Start/End: Original strand, 38917520 - 38917568
Alignment:
Q  170 tatactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    |||||| |||||||||||||||||||||||| ||| ||| |||||||||    
T  38917520 tatactccctccggtcctatttataagagaattttgggtcaacaaaagt 38917568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 303
Target Start/End: Original strand, 41478638 - 41478770
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    ||||| |||||||||||||||||||||||| ||| ||| |||||||||  |||||| | |    || ||    | | ||||||  ||||||||||||| |    
T  41478638 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 41478737  T
Q  271 aaattctctaataaataggaccggagggagtat 303  Q
    || |||||| ||||||||||||||||| |||||    
T  41478738 aatttctcttataaataggaccggaggtagtat 41478770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 218
Target Start/End: Original strand, 6648518 - 6648565
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    ||||| |||||||||||||||||||||||| ||| ||| |||||||||    
T  6648518 atactccctccggtcctatttataagagaattttgggtcaacaaaagt 6648565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 218
Target Start/End: Original strand, 9047754 - 9047801
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    ||||| |||||||||||||||||||||||| ||| ||| |||||||||    
T  9047754 atactccctccggtcctatttataagagaattttgggtcaacaaaagt 9047801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 256 - 303
Target Start/End: Complemental strand, 44397593 - 44397546
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagtat 303  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| |||||    
T  44397593 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 44397546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 4553125 - 4553059
Alignment:
Q  187 tatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacat 253  Q
    ||||||||||||||| || ||| ||||||| |  ||||||||||| |||||||||||  ||||||||    
T  4553125 tatttataagagaaagtttggtcaacaaaaatagatgtatttggattgaatttttaataagatacat 4553059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 12337937 - 12337983
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    |||| |||||||||||||||||||||||| ||| ||| |||||||||    
T  12337937 tactccctccggtcctatttataagagaattttgggtcaacaaaagt 12337983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 13197710 - 13197756
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    |||| |||||||||||||||||||||||| ||| ||| |||||||||    
T  13197710 tactccctccggtcctatttataagagaattttgggtcaacaaaagt 13197756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 13197794 - 13197840
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagta 302  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| ||||    
T  13197794 acttttgttgacctaaatttctcttataaataggaccggaggtagta 13197840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 16044401 - 16044447
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagta 302  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| ||||    
T  16044401 acttttgttgacctaaatttctcttataaataggaccggaggtagta 16044447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 37666694 - 37666740
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagta 302  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| ||||    
T  37666694 acttttgttgacctaaatttctcttataaataggaccggaggtagta 37666740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 248 - 309
Target Start/End: Original strand, 23227348 - 23227409
Alignment:
Q  248 atacatcaacttttgttgacccaaaattctctaataaataggaccggagggagtataatttt 309  Q
    ||||||||||||||||||||| |||  ||||| ||||||||||| | ||| ||||| |||||    
T  23227348 atacatcaacttttgttgaccaaaatgtctcttataaataggactgaaggaagtattatttt 23227409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 334
Target Start/End: Complemental strand, 28751241 - 28751208
Alignment:
Q  301 tataatttttggcaagcgctcactccgttcacaa 334  Q
    |||||||||||| |||||||||||||||||||||    
T  28751241 tataatttttggtaagcgctcactccgttcacaa 28751208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 226
Target Start/End: Complemental strand, 44397680 - 44397623
Alignment:
Q  169 atatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtat 226  Q
    ||||||| || ||||||||||||||||||||| ||| ||| |||||||||  ||||||    
T  44397680 atatactccccccggtcctatttataagagaattttgggtcaacaaaagttgatgtat 44397623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 168; Significance: 1e-89; HSPs: 62)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 301 - 509
Target Start/End: Complemental strand, 1413310 - 1413100
Alignment:
Q  301 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagcacaca--cccttggaagtgatatcccacatatataaacactactagagt 398  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||  | ||  ||||||||||||||||||||||||||||||||||||||||||    
T  1413310 tataatttttggcaagcgctcactccgttcacaaaagtgggtaccccaagggcgcaagcccttggaagtgatatcccacatatataaacactactagagt 1413211  T
Q  399 gtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaacta 498  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||    
T  1413210 gtgtgatctactcaatgtgggacataaaattttcaattcacactttacactagtttcttcatccttgtgtttacattccaaaggctccacataacaacta 1413111  T
Q  499 gtatactccaa 509  Q
    |||||||||||    
T  1413110 gtatactccaa 1413100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 301 - 541
Target Start/End: Original strand, 36254429 - 36254669
Alignment:
Q  301 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgt 400  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||    
T  36254429 tataatttttggctagcgctcactccgttcacaaaagtgggtaccccaagggcacacccttggaagtgatttcccacatatataaacactactagagtgt 36254528  T
Q  401 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagt 500  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||| | ||||||||    
T  36254529 gtgatctacccaatgtggaacataaaattttcaattcacactttacactagtttctacatccttgtgtttacattccaatgtctccacataacaactagt 36254628  T
Q  501 atactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    ||||||||||       || |||||||||||||| ||||||    
T  36254629 atactccaagtttttgccaatatacactagtgtttcaacaa 36254669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 167; E-Value: 6e-89
Query Start/End: Original strand, 301 - 540
Target Start/End: Complemental strand, 24770840 - 24770601
Alignment:
Q  301 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgt 400  Q
    ||||||||||||| ||||||||||||||| ||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24770840 tataatttttggctagcgctcactccgttaacaaaagtgggtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgt 24770741  T
Q  401 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagt 500  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| | |||| || | ||||||||    
T  24770740 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctacatcattgtgtttacattccaatgtctcctcataacaactagt 24770641  T
Q  501 atactccaagnnnnnnncattatacactagtgttccaaca 540  Q
    ||||||||||       || ||||||||||||||||||||    
T  24770640 atactccaagtttttgccaatatacactagtgttccaaca 24770601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 160; E-Value: 9e-85
Query Start/End: Original strand, 301 - 541
Target Start/End: Complemental strand, 24776294 - 24776054
Alignment:
Q  301 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgt 400  Q
    ||||||||||||| | ||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24776294 tataatttttggctaacgctcactccgttcacaaaagtgggtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgt 24776195  T
Q  401 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagt 500  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||| | |||| || | ||||||||    
T  24776194 gtgatctacccaatgtgggacataaaattttcaattcacactttatactagtttctacatcattgtgtttacattccaatgtctcctcataacaactagt 24776095  T
Q  501 atactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    |||||| |||       || |||||||||||||||||||||    
T  24776094 atactcaaagtttttgccaatatacactagtgttccaacaa 24776054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 125; E-Value: 7e-64
Query Start/End: Original strand, 172 - 308
Target Start/End: Original strand, 9395350 - 9395486
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9395350 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 9395449  T
Q  272 aattctctaataaataggaccggagggagtataattt 308  Q
    |||||||| ||||||||||||||||||||||| ||||    
T  9395450 aattctcttataaataggaccggagggagtattattt 9395486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 357 - 540
Target Start/End: Original strand, 26709656 - 26709839
Alignment:
Q  357 cccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttct 456  Q
    ||||||||||||||||| |||||||||||||||||||| | ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  26709656 cccttggaagtgatatctcacatatataaacactactacaatgtgtaatctactcaatgtgggacataaaattttcaattcacactttacactagtttct 26709755  T
Q  457 ccatccttgtgtttacattccaaaggctccacaaaccaactagtatactccaagnnnnnnncattatacactagtgttccaaca 540  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||| |||        |||||||||||| ||||||||||    
T  26709756 ccattcttgtgtttacattccataggctccacaaaccaactagtatacttcaaattttttccattatacactaatgttccaaca 26709839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 357 - 540
Target Start/End: Original strand, 26979390 - 26979573
Alignment:
Q  357 cccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttct 456  Q
    ||||||||||||||||| |||||||||||||||||||| | ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  26979390 cccttggaagtgatatctcacatatataaacactactacaatgtgtaatctactcaatgtgggacataaaattttcaattcacactttacactagtttct 26979489  T
Q  457 ccatccttgtgtttacattccaaaggctccacaaaccaactagtatactccaagnnnnnnncattatacactagtgttccaaca 540  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||| |||        |||||||||||| ||||||||||    
T  26979490 ccattcttgtgtttacattccataggctccacaaaccaactagtatacttcaaattttttccattatacactaatgttccaaca 26979573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 171 - 308
Target Start/End: Complemental strand, 36563669 - 36563532
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36563669 atactacctccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 36563570  T
Q  271 aaattctctaataaataggaccggagggagtataattt 308  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  36563569 aaattctcttataaataggaccggagggagtatgattt 36563532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 171 - 303
Target Start/End: Complemental strand, 41989538 - 41989406
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41989538 atactacctccggtcctatttgtaagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 41989439  T
Q  271 aaattctctaataaataggaccggagggagtat 303  Q
    ||||||||| |||||||||||||||||||||||    
T  41989438 aaattctcttataaataggaccggagggagtat 41989406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 172 - 311
Target Start/End: Original strand, 11795168 - 11795307
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11795168 tactacctccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 11795267  T
Q  272 aattctctaataaataggaccggagggagtataatttttg 311  Q
    |||||||| ||||||||||| |||||||||||||| ||||    
T  11795268 aattctcttataaataggactggagggagtataatatttg 11795307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 171 - 302
Target Start/End: Complemental strand, 37149086 - 37148955
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37149086 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 37148987  T
Q  271 aaattctctaataaataggaccggagggagta 302  Q
    ||||||| | ||||||||||||||||||||||    
T  37148986 aaattctattataaataggaccggagggagta 37148955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 389 - 540
Target Start/End: Original strand, 17510424 - 17510575
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17510424 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 17510523  T
Q  489 aaaccaactagtatactccaagnnnnnnncattatacactagtgttccaaca 540  Q
    ||||  ||||||||||||||||       |||||||||||||||||||||||    
T  17510524 aaactcactagtatactccaagtttttttcattatacactagtgttccaaca 17510575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 171 - 308
Target Start/End: Original strand, 13103023 - 13103160
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  13103023 atacttcctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgaccca 13103122  T
Q  271 aaattctctaataaataggaccggagggagtataattt 308  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  13103123 aaattctcttataaataggaccggagggagtattattt 13103160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 171 - 302
Target Start/End: Original strand, 23359941 - 23360072
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23359941 atactacctctggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 23360040  T
Q  271 aaattctctaataaataggaccggagggagta 302  Q
    ||||||||| ||||||||||||||||| ||||    
T  23360041 aaattctcttataaataggaccggaggtagta 23360072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 171 - 305
Target Start/End: Original strand, 17025623 - 17025757
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  17025623 atactacctccggtcctatttataagagaaatttaggtccacaaaagtgaatgtatttaaactgaatttttaactagatacatcaacttttgttgaccca 17025722  T
Q  271 aaattctctaataaataggaccggagggagtataa 305  Q
    ||||||||| |||||||||||||||||||||||||    
T  17025723 aaattctcttataaataggaccggagggagtataa 17025757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 171 - 308
Target Start/End: Original strand, 13033050 - 13033187
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  13033050 atacttcctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgaccca 13033149  T
Q  271 aaattctctaataaataggaccggagggagtataattt 308  Q
    ||||||||| |||||||||| |||||||||||| ||||    
T  13033150 aaattctcttataaataggatcggagggagtattattt 13033187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 171 - 302
Target Start/End: Original strand, 20848073 - 20848203
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  20848073 atactacctccggtcctatttataagagaaatttaggtcaataaaagtgaatgtatttggactgaatttttaactagatacatcaatttttgttg-ccca 20848171  T
Q  271 aaattctctaataaataggaccggagggagta 302  Q
    ||||||||| ||||||||||||||||||||||    
T  20848172 aaattctcttataaataggaccggagggagta 20848203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 171 - 305
Target Start/End: Original strand, 37641952 - 37642087
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaa-gtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccc 269  Q
    |||||||||||||||||||||||||||||||||||||| || |||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  37641952 atactacctccggtcctatttataagagaaatttaggtcaataaaaagtgaatgtatgtggactgaatttttaactagatacatcaacttttattgaccc 37642051  T
Q  270 aaaattctctaataaataggaccggagggagtataa 305  Q
    |||||||||| |||||||||||||||||||||||||    
T  37642052 aaaattctcttataaataggaccggagggagtataa 37642087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 389 - 541
Target Start/End: Original strand, 42019939 - 42020091
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  42019939 ctactagagtgtgtgatctatccgatgtgggacataaaattttcaattcacattttacattagtttctccatccttgtgtttacattccaaaggctccac 42020038  T
Q  489 aaaccaactagtatactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    ||||  ||||||||||||||||       ||||||||||||||||||||||||    
T  42020039 aaactcactagtatactccaagtttttttcattatacactagtgttccaacaa 42020091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 389 - 541
Target Start/End: Original strand, 43580026 - 43580180
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43580026 ctactagagtatgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 43580125  T
Q  489 aaaccaactagtatactccaag--nnnnnnncattatacactagtgttccaacaa 541  Q
    ||||  ||||||||||||||||         ||||||||||||||||||||||||    
T  43580126 aaactcactagtatactccaagtttttcctccattatacactagtgttccaacaa 43580180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 389 - 540
Target Start/End: Original strand, 42024719 - 42024870
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  42024719 ctactagagtgtgtgatctatccgatgtgggacataaaattttcaattcacattttacactagtttctccatccttatgtttacattccaaaggctccac 42024818  T
Q  489 aaaccaactagtatactccaagnnnnnnncattatacactagtgttccaaca 540  Q
    ||||  ||||||||||| ||||       |||||||||||||||||||||||    
T  42024819 aaactcactagtatacttcaagtttttttcattatacactagtgttccaaca 42024870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 171 - 302
Target Start/End: Original strand, 582988 - 583118
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  582988 atactacctccggtcctatttataagagaaatttaggtcaacataagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 583087  T
Q  271 aaattctctaataaataggaccggagggagta 302  Q
    ||||||| | ||  |||||| |||||||||||    
T  583088 aaattcttttat-tataggatcggagggagta 583118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 172 - 303
Target Start/End: Complemental strand, 26350480 - 26350349
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    |||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||    
T  26350480 tactccctccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttattgattcaa 26350381  T
Q  272 aattctctaataaataggaccggagggagtat 303  Q
    |||||| | |||||||||||||||||||||||    
T  26350380 aattcttttataaataggaccggagggagtat 26350349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 389 - 541
Target Start/End: Original strand, 17505319 - 17505473
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  17505319 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacaatagtttttccatccttgtgtttacattccaaaggctccac 17505418  T
Q  489 aaaccaactagtatactccaag--nnnnnnncattatacactagtgttccaacaa 541  Q
    ||||  ||||||||| ||||||         ||||||||||||||||||||||||    
T  17505419 aaactcactagtatattccaagttttttttccattatacactagtgttccaacaa 17505473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 171 - 299
Target Start/End: Original strand, 4443959 - 4444087
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    ||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| | |    
T  4443959 atacttccttcggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaaatagatacatcaacttttgttgatcta 4444058  T
Q  271 aaattctctaataaataggaccggaggga 299  Q
    ||||||||| ||||||| |||||||||||    
T  4444059 aaattctcttataaataagaccggaggga 4444087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 196 - 304
Target Start/End: Original strand, 21575970 - 21576078
Alignment:
Q  196 gagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctctaataaataggaccgga 295  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  21575970 gagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaattagatacatcaacttttgttgatccaaaattctcttataaataggaccgga 21576069  T
Q  296 gggagtata 304  Q
    |||||||||    
T  21576070 gggagtata 21576078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 400 - 541
Target Start/End: Original strand, 41853846 - 41853989
Alignment:
Q  400 tgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactag 499  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||    
T  41853846 tgtgatctacccgatgtgggacatagaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactccctag 41853945  T
Q  500 tatactccaag--nnnnnnncattatacactagtgttccaacaa 541  Q
    |||||||||||         ||||||||||||||||||||||||    
T  41853946 tatactccaagttttttttccattatacactagtgttccaacaa 41853989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 399 - 541
Target Start/End: Original strand, 41858960 - 41859103
Alignment:
Q  399 gtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaacta 498  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||  ||||    
T  41858960 gtgtgatctacccgatgtgggacatagaattttcaattcacactttacactaatttttccatccttgtgtttacattccaaaggctccacaaactcacta 41859059  T
Q  499 gtatactccaag-nnnnnnncattatacactagtgttccaacaa 541  Q
    ||||||||||||        ||||||||||||||||||||||||    
T  41859060 gtatactccaagtttttttccattatacactagtgttccaacaa 41859103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 193 - 302
Target Start/End: Original strand, 6126845 - 6126954
Alignment:
Q  193 taagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctctaataaataggacc 292  Q
    |||||||||||||| | ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  6126845 taagagaaatttagatcaacaaaaatgaatgtatttggactaaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 6126944  T
Q  293 ggagggagta 302  Q
    ||||||||||    
T  6126945 ggagggagta 6126954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 171 - 250
Target Start/End: Complemental strand, 38361822 - 38361743
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagata 250  Q
    ||||| |||||| |||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||| ||||||    
T  38361822 atacttcctccgatcctatttataagataaatttaggtcaataaaagtgaatgtatttggactgaatttttaaatagata 38361743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 179 - 260
Target Start/End: Complemental strand, 13539986 - 13539909
Alignment:
Q  179 tccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttt 260  Q
    |||||||||||||||||||||||||||||| ||||||    |||  |||| |||||||||||||||||||||||||||||||    
T  13539986 tccggtcctatttataagagaaatttaggtcaacaaa----aataaatttagactgaatttttaactagatacatcaacttt 13539909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 196 - 288
Target Start/End: Complemental strand, 2366444 - 2366352
Alignment:
Q  196 gagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctctaataaatag 288  Q
    |||||| || |||||| ||||||  |||||||||||||||| ||||||| | |||||| |||| ||||||||||||| |||||| ||||||||    
T  2366444 gagaaagtttggttaataaaagttgatgtatttggactgaaattttaaccaaatacatgaactcttgttgacccaaatttctcttataaatag 2366352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 181 - 303
Target Start/End: Original strand, 966157 - 966279
Alignment:
Q  181 cggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcta 280  Q
    |||||||||||| |||||||| ||   | ||||| |||  |||||| | ||||||||||||||| ||||||||  | ||||||||| ||||| ||||||     
T  966157 cggtcctatttacaagagaaagttgaatcaacaacagttcatgtatcttgactgaatttttaaccagatacattcatttttgttgatccaaatttctctt 966256  T
Q  281 ataaataggaccggagggagtat 303  Q
    ||||||||||| |||||| ||||    
T  966257 ataaataggactggagggggtat 966279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 206 - 303
Target Start/End: Original strand, 35904433 - 35904528
Alignment:
Q  206 ggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctctaataaataggaccggagggagtat 303  Q
    |||||| ||||||  |||||||||||||||||||||||||| ||||||  ||||||||||||  ||  |||||||||||||| ||||| || ||||||    
T  35904433 ggttaataaaagttgatgtatttggactgaatttttaactaaatacat--acttttgttgactaaattttctctaataaataagaccgaagagagtat 35904528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 26709545 - 26709585
Alignment:
Q  32 acgtgtgagacttggtctccgtgtgcgggaatctcggagca 72  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  26709545 acgtgtgagacttggtctccgtgtgcgggaatctcggagca 26709585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 26979279 - 26979319
Alignment:
Q  32 acgtgtgagacttggtctccgtgtgcgggaatctcggagca 72  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  26979279 acgtgtgagacttggtctccgtgtgcgggaatctcggagca 26979319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 552 - 607
Target Start/End: Original strand, 42212717 - 42212772
Alignment:
Q  552 acacctacgaagtccaagggttaacataaaatacatgtaagagggagaataaatgt 607  Q
    ||||||||||||| |||||||| |||||||||||||| |||| |||||||||||||    
T  42212717 acacctacgaagttcaagggttgacataaaatacatggaagaaggagaataaatgt 42212772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 296
Target Start/End: Complemental strand, 3549663 - 3549553
Alignment:
Q  186 ctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctctaataaa 285  Q
    |||||||||||||| ||||  || ||||||| | ||||||| ||| || ||||||||||   ||||||||||||||||| |   ||| |||||| |||||    
T  3549663 ctatttataagagatattttagtcaacaaaaattaatgtatctggtctaaatttttaaccgaatacatcaacttttgttaatataaatttctcttataaa 3549564  T
Q  286 taggaccggag 296  Q
    |||||||||||    
T  3549563 taggaccggag 3549553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 266
Target Start/End: Original strand, 39290775 - 39290868
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttga 266  Q
    |||| |||||||||||||| |||||||||  | |||| ||||||| |  ||||||||||| | ||||||||| ||||||||| ||||||||||||    
T  39290775 tactccctccggtcctatt-ataagagaatatcaggtcaacaaaaattgatgtatttggattaaatttttaattagatacattaacttttgttga 39290868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 235 - 299
Target Start/End: Complemental strand, 9006949 - 9006885
Alignment:
Q  235 aatttttaactagatacatcaacttttgttgacccaaaattctctaataaataggaccggaggga 299  Q
    |||||| ||||||||||||||||||||||||||| |||| ||| | |||||||||| | ||||||    
T  9006949 aattttgaactagatacatcaacttttgttgacctaaaagtctgttataaataggagcagaggga 9006885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 675 - 739
Target Start/End: Original strand, 42212854 - 42212918
Alignment:
Q  675 acaagcattttctttaaaaatatgaatataaattttatcattcatttaaatgaccgattatctct 739  Q
    |||||||||||||||||||| ||| | |||| |||| || ||||||||||||||||| |||||||    
T  42212854 acaagcattttctttaaaaacatgcacataagttttgtcgttcatttaaatgaccgactatctct 42212918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 11574204 - 11574114
Alignment:
Q  178 ctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacc 268  Q
    |||||||||||||||||||||| |||||||| ||||||| |  |  ||| ||| |  | || |||||||||||||| ||||||||||||||    
T  11574204 ctccggtcctatttataagagacatttaggtcaacaaaaattgaaatatctggtccaatttgttaactagatacattaacttttgttgacc 11574114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 23360072 - 23360026
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    ||||||||||||||||||||||||||||| ||| ||| |||||||||    
T  23360072 tactacctccggtcctatttataagagaattttgggtcaacaaaagt 23360026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 220 - 294
Target Start/End: Complemental strand, 36595856 - 36595782
Alignment:
Q  220 aatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctctaataaataggaccgg 294  Q
    ||||||| | ||||||||||||||  ||||||||||| ||||||||||| ||  |||||| ||||||| ||||||    
T  36595856 aatgtatctagactgaatttttaatcagatacatcaatttttgttgacctaactttctcttataaataagaccgg 36595782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 752 - 802
Target Start/End: Original strand, 42212911 - 42212961
Alignment:
Q  752 ctatctctatttttgtccgagattgaactttgattacatgcttaagagatt 802  Q
    ||||||||||||||||| |||||||||| |||| ||| |||||||||||||    
T  42212911 ctatctctatttttgtctgagattgaacgttgactacctgcttaagagatt 42212961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 844 - 894
Target Start/End: Original strand, 42213007 - 42213056
Alignment:
Q  844 gtacaatttaaagttgagaaattcaaaagtgaagcaaacaagtagcaacca 894  Q
    |||||||||||||||||||||||| |||||| ||||| |||||||||||||    
T  42213007 gtacaatttaaagttgagaaattc-aaagtgtagcaagcaagtagcaacca 42213056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 227
Target Start/End: Original strand, 3549553 - 3549602
Alignment:
Q  178 ctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatt 227  Q
    ||||||||||||||||||||||||||||  |||||||||||  |||||||    
T  3549553 ctccggtcctatttataagagaaatttatattaacaaaagttgatgtatt 3549602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 256 - 312
Target Start/End: Complemental strand, 583035 - 582979
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagtataatttttgg 312  Q
    |||| |||||||| ||| |||||| ||||||||||||||||| ||||| ||||||||    
T  583035 acttatgttgacctaaatttctcttataaataggaccggaggtagtattatttttgg 582979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 218
Target Start/End: Complemental strand, 17025756 - 17025708
Alignment:
Q  170 tatactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    |||||| |||||||||||||||||||||||| ||| ||| |||||||||    
T  17025756 tatactccctccggtcctatttataagagaattttgggtcaacaaaagt 17025708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 37149039 - 37149091
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagtataattt 308  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| ||||| ||||    
T  37149039 acttttgttgacctaaatttctcttataaataggaccggaggtagtattattt 37149091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 218
Target Start/End: Complemental strand, 9395481 - 9395434
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    ||||| |||||||||||||||||||||||| ||| ||| |||||||||    
T  9395481 atactccctccggtcctatttataagagaattttgggtcaacaaaagt 9395434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 256 - 303
Target Start/End: Complemental strand, 13033097 - 13033050
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagtat 303  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| |||||    
T  13033097 acttttgttgacctaaatttctcttataaataggaccggaggaagtat 13033050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 256 - 303
Target Start/End: Complemental strand, 13103070 - 13103023
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagtat 303  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| |||||    
T  13103070 acttttgttgacctaaatttctcttataaataggaccggaggaagtat 13103023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 218
Target Start/End: Complemental strand, 13103155 - 13103108
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    ||||| |||||||||||||||||||||||| ||| ||| |||||||||    
T  13103155 atactccctccggtcctatttataagagaattttgggtcaacaaaagt 13103108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 218
Target Start/End: Original strand, 36563537 - 36563584
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    ||||| |||||||||||||||||||||||| ||| ||| |||||||||    
T  36563537 atactccctccggtcctatttataagagaattttgggtcaacaaaagt 36563584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 218
Target Start/End: Original strand, 41989406 - 41989453
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    ||||| |||||||||||||||||||||||| ||| ||| |||||||||    
T  41989406 atactccctccggtcctatttataagagaattttgggtcaacaaaagt 41989453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 6126954 - 6126908
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    |||| |||||||||||||||||||||||| ||| ||| |||||||||    
T  6126954 tactccctccggtcctatttataagagaattttgggtcaacaaaagt 6126908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 256 - 302
Target Start/End: Complemental strand, 9395396 - 9395350
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagta 302  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| ||||    
T  9395396 acttttgttgacctaaatttctcttataaataggaccggaggtagta 9395350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 181 - 243
Target Start/End: Complemental strand, 13284757 - 13284695
Alignment:
Q  181 cggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaa 243  Q
    ||||||||||||||| ||| ||||||| || |||||||  |||||||||| || |||||||||    
T  13284757 cggtcctatttataatagatatttaggctatcaaaagtttatgtatttggtctaaatttttaa 13284695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 26350434 - 26350480
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagta 302  Q
    ||||||||||||| ||| |||||| |||||||||| |||||||||||    
T  26350434 acttttgttgacctaaatttctcttataaataggatcggagggagta 26350480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 966273 - 966224
Alignment:
Q  177 cctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtat 226  Q
    ||||| |||||||||||||||||||||| | | ||||||| |||||||||    
T  966273 cctccagtcctatttataagagaaatttggatcaacaaaaatgaatgtat 966224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 21576079 - 21576030
Alignment:
Q  169 atatactacctccggtcctatttataagagaaatttaggttaacaaaagt 218  Q
    ||||||| |||||||||||||||||||||||| ||| | | |||||||||    
T  21576079 atatactccctccggtcctatttataagagaattttggatcaacaaaagt 21576030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 167; Significance: 6e-89; HSPs: 2)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 167; E-Value: 6e-89
Query Start/End: Original strand, 301 - 540
Target Start/End: Complemental strand, 13221 - 12982
Alignment:
Q  301 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgt 400  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||    
T  13221 tataatttttggctagcgctcactccgttcacaaaagtgggtaccccaagggcacacccttggaagtgatttcccacatatataaacactactagagtgt 13122  T
Q  401 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagt 500  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| | |||| || | ||||||||    
T  13121 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctacatcattgtgtttacattccaatgtctcctcataacaactagt 13022  T
Q  501 atactccaagnnnnnnncattatacactagtgttccaaca 540  Q
    ||||||||||       || ||||||||||||||||||||    
T  13021 atactccaagtttttgccaatatacactagtgttccaaca 12982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 160; E-Value: 9e-85
Query Start/End: Original strand, 301 - 541
Target Start/End: Complemental strand, 18678 - 18438
Alignment:
Q  301 tataatttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgt 400  Q
    ||||||||||||| ||||||||||||||| ||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18678 tataatttttggctagcgctcactccgttaacaaaagtgggtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgt 18579  T
Q  401 gtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagt 500  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||| | |||| || | ||||||||    
T  18578 gtgatctacccaatgtgggacataaaattttcaattcacactttatactagtttctacatcattgtgtttacattccaatgtctcctcataacaactagt 18479  T
Q  501 atactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    |||||| |||       || |||||||||||||||||||||    
T  18478 atactctaagtttttgccaatatacactagtgttccaacaa 18438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 122; Significance: 4e-62; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 171 - 308
Target Start/End: Original strand, 23784 - 23921
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23784 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 23883  T
Q  271 aaattctctaataaataggaccggagggagtataattt 308  Q
    ||||| ||| ||||||||||||||||||||||| ||||    
T  23884 aaattttcttataaataggaccggagggagtattattt 23921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 256 - 303
Target Start/End: Complemental strand, 23831 - 23784
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagtat 303  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| |||||    
T  23831 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 23784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 121; Significance: 2e-61; HSPs: 2)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 171 - 303
Target Start/End: Original strand, 12859 - 12991
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  12859 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgctgaccca 12958  T
Q  271 aaattctctaataaataggaccggagggagtat 303  Q
    ||||||||| |||||||||||||||||||||||    
T  12959 aaattctcttataaataggaccggagggagtat 12991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 256 - 303
Target Start/End: Complemental strand, 12906 - 12859
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagtat 303  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| |||||    
T  12906 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 12859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 120; Significance: 6e-61; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 171 - 302
Target Start/End: Original strand, 49504 - 49635
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  49504 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgaccca 49603  T
Q  271 aaattctctaataaataggaccggagggagta 302  Q
    ||||||||| ||||||||||||||||||||||    
T  49604 aaattctcttataaataggaccggagggagta 49635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 303
Target Start/End: Complemental strand, 49640 - 49504
Alignment:
Q  167 ttatatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttga 266  Q
    |||| |||| |||||||||||||||||||||||| ||| ||| |||||||||  |||||||| |    || ||    | | ||||||  |||||||||||    
T  49640 ttatttactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttga 49541  T
Q  267 cccaaaattctctaataaataggaccggagggagtat 303  Q
    || ||| |||||| ||||||||||||||||| |||||    
T  49540 cctaaatttctcttataaataggaccggaggtagtat 49504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 118; Significance: 1e-59; HSPs: 2)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 172 - 309
Target Start/End: Complemental strand, 6261 - 6124
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  6261 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatgtggactgaatttttaactagatacatcaacttttgttgacccaa 6162  T
Q  272 aattctctaataaataggaccggagggagtataatttt 309  Q
    |||| ||| ||||||||||||||||||||||| |||||    
T  6161 aattttcttataaataggaccggagggagtattatttt 6124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 6215 - 6261
Alignment:
Q  256 acttttgttgacccaaaattctctaataaataggaccggagggagta 302  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| ||||    
T  6215 acttttgttgacctaaatttctcttataaataggaccggaggtagta 6261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 113; Significance: 1e-56; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 389 - 541
Target Start/End: Original strand, 3929 - 4082
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3929 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 4028  T
Q  489 aaaccaactagtatactccaag-nnnnnnncattatacactagtgttccaacaa 541  Q
    ||||  ||||||||||||||||        ||||||||||||||||||||||||    
T  4029 aaactcactagtatactccaagttttttttcattatacactagtgttccaacaa 4082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 110; Significance: 6e-55; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 389 - 510
Target Start/End: Original strand, 31964 - 32085
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31964 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 32063  T
Q  489 aaaccaactagtatactccaag 510  Q
    ||||  ||||||||||||||||    
T  32064 aaactcactagtatactccaag 32085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 389 - 510
Target Start/End: Original strand, 26792 - 26913
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  26792 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttttgtttacattccaaaggctccac 26891  T
Q  489 aaaccaactagtatactccaag 510  Q
    ||||  ||||||||||||||||    
T  26892 aaactcactagtatactccaag 26913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1707 (Bit Score: 108; Significance: 9e-54; HSPs: 1)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 171 - 290
Target Start/End: Original strand, 1334 - 1453
Alignment:
Q  171 atactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 270  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1334 atactacatccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 1433  T
Q  271 aaattctctaataaatagga 290  Q
    ||||||||| ||||||||||    
T  1434 aaattctcttataaatagga 1453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 107; Significance: 4e-53; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 389 - 541
Target Start/End: Original strand, 3443 - 3594
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3443 ctactagagtgtgtgatctaccggatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 3542  T
Q  489 aaaccaactagtatactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    ||||  ||||||||||||||||       || |||||||||||||||||||||    
T  3543 aaactcactagtatactccaag-tttttccaatatacactagtgttccaacaa 3594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 107; Significance: 4e-53; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 389 - 541
Target Start/End: Complemental strand, 81092 - 80941
Alignment:
Q  389 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 488  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  81092 ctactagagtgtgtgatctaccggatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 80993  T
Q  489 aaaccaactagtatactccaagnnnnnnncattatacactagtgttccaacaa 541  Q
    ||||  ||||||||||||||||       || |||||||||||||||||||||    
T  80992 aaactcactagtatactccaag-tttttccaatatacactagtgttccaacaa 80941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 102; Significance: 4e-50; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 306 - 447
Target Start/End: Original strand, 37572 - 37712
Alignment:
Q  306 tttttggcaagcgctcactccgttcacaaaagtgtgtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgtgtgat 405  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||  |||||  ||| | |||||||||||||||||||||||||||| |||||||||||    
T  37572 tttttggctagcgctcactccgttcacaaaagtgggtaccccaagggcacacttttg-aggtgatatcccacatatataaacactactggagtgtgtgat 37670  T
Q  406 ctacccaatgtgggacataaaattttcaattcacactttaca 447  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  37671 ctacccaatgtgggacataaaattttcaattcacactttaca 37712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 37473 - 37514
Alignment:
Q  32 acgtgtgagacttggtc-tccgtgtgcgggaatctcggagca 72  Q
    ||||||||||||||||| |||| |||||||||||||||||||    
T  37473 acgtgtgagacttggtcctccgcgtgcgggaatctcggagca 37514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 64; Significance: 2e-27; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 172 - 303
Target Start/End: Complemental strand, 231433 - 231302
Alignment:
Q  172 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 271  Q
    |||| |||||| ||||| |||||||||||| || | | |||||||||  |||||| ||||||||||||| |||||| || ||||||||||||||||| ||    
T  231433 tactccctccgatcctaattataagagaaagttggatcaacaaaagtttatgtatctggactgaattttgaactaggtatatcaacttttgttgacctaa 231334  T
Q  272 aattctctaataaataggaccggagggagtat 303  Q
     ||||||  |||||||||||||||||||||||    
T  231333 tattctcctataaataggaccggagggagtat 231302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 49; Significance: 2e-18; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 170 - 302
Target Start/End: Complemental strand, 13858 - 13731
Alignment:
Q  170 tatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatc--aacttttgttgac 267  Q
    |||||| ||| | |||||| ||||||||||||||||||| ||||||| | ||| |||||| |||||||||||||||| |||||||  ||||||||||||     
T  13858 tatactcccttcagtcctacttataagagaaatttaggtcaacaaaaattaatatatttgaactgaatttttaacta-atacatcaaaacttttgttgat 13760  T
Q  268 ccaaaattctctaataaataggaccggagggagta 302  Q
    ||      |||| ||||||||||||||||||||||    
T  13759 cc------ctcttataaataggaccggagggagta 13731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 169 - 267
Target Start/End: Complemental strand, 117 - 20
Alignment:
Q  169 atatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgac 267  Q
    ||||||| |||||||| ||||||||| ||||||  | ||| |||||||||  ||||||||||||| |||||||||| | ||||||||||||||||||||    
T  117 atatactccctccggttctatttata-gagaaagattggtcaacaaaagttgatgtatttggactaaatttttaaccaaatacatcaacttttgttgac 20  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 268
Target Start/End: Complemental strand, 12478 - 12387
Alignment:
Q  177 cctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacc 268  Q
    ||||||||||||||||||||||| |||| ||| || ||||||   ||| ||||| || |||| ||||| ||||||||||  |||||||||||    
T  12478 cctccggtcctatttataagagatattttggtcaaaaaaagttggtgtgtttggtctaaattcttaaccagatacatcacattttgttgacc 12387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 267
Target Start/End: Complemental strand, 30122 - 30042
Alignment:
Q  187 tatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgac 267  Q
    ||||||||| ||| |||||  | |||||||||  |||||||||| || |||| |||||||||||||||| ||||| |||||    
T  30122 tatttataatagacatttaaataaacaaaagtagatgtatttggtctaaattcttaactagatacatcatcttttattgac 30042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University