View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1134_low_27 (Length: 275)
Name: NF1134_low_27
Description: NF1134
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1134_low_27 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 54 - 275
Target Start/End: Original strand, 26976538 - 26976756
Alignment:
| Q |
54 |
tggagaaccctagaaatccactatgagccttattagtgctagttgaacgagaaagaccaaagcatagtgttgaagtaggtgaagtagcatcttcatcttc |
153 |
Q |
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| T |
26976538 |
tggagaaccctaggaatccactatgagcctta---gtgctagttgaacgagaaagaccaaagcatagtgttgaagtaggtgaagtagcatcttcatcttc |
26976634 |
T |
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| Q |
154 |
ttctcttgtgaaatcaatagatgaaccataacttagaaaacgcctccttcttgtaacaactttggaagatgatgatgatgagtctgaggaagaacatgaa |
253 |
Q |
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| T |
26976635 |
ttctcttgtgaaatcaatagatgaaccataacttagaaaacgcctccttcttgtaacaactttggaagatgatgatgatgagtctgaggaagaacatgaa |
26976734 |
T |
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| Q |
254 |
gcagaagaataataaggtgaag |
275 |
Q |
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| T |
26976735 |
gcagaagaataataaggtgaag |
26976756 |
T |
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