View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1134_low_7 (Length: 497)
Name: NF1134_low_7
Description: NF1134
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1134_low_7 |
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Alignment Details
Target: chr5 (Bit Score: 198; Significance: 1e-107; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 171 - 376
Target Start/End: Complemental strand, 2501684 - 2501479
Alignment:
| Q |
171 |
aggtgcagtaaactccaagtcaaagaaaggaccttcatcatcattgtcgtcgctgctttcagcggtggtgaggatagtagtggtgttaacggtggtggta |
270 |
Q |
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| T |
2501684 |
aggtgcagtaaactccaagtcaaagaaaggaccttcatcatcattgtcgtcgctgctttcagcggtggtgaggatagtagtggtgttaacgttggtggtg |
2501585 |
T |
|
| Q |
271 |
gttgtggagtcagaagaaggagagagaccaacaacagcaccaccacctcgccagtatttgagcaagctaaaagcttccatcgttgggagagccagtatag |
370 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2501584 |
gttgtggagtcagaagaaggagagagaccaacaacagcaccaccacctcgccagtatttgagcaagctaaaagcttccatcgttgggagagccagtatag |
2501485 |
T |
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| Q |
371 |
tatagt |
376 |
Q |
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|||||| |
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| T |
2501484 |
tatagt |
2501479 |
T |
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