View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11350_high_2 (Length: 275)
Name: NF11350_high_2
Description: NF11350
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11350_high_2 |
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Alignment Details
Target: chr8 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 8 - 265
Target Start/End: Complemental strand, 37493066 - 37492805
Alignment:
| Q |
8 |
taatagtgtacggttgacctcatgtatacttgttcaaaagaaatccacaaatttagggatcagaaaggcaagtgtcgaattgtttgaagttagccaatca |
107 |
Q |
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| T |
37493066 |
taatattgtacggttgacctcatgtatacttgttcaaaagaaatccacaaatttagggatcagaaaggcaagtgtcgaattgtttgaagttagccaatca |
37492967 |
T |
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| Q |
108 |
aattcagcatttttggggtgccaaccaaaagctttaatctaatgcaaccaagtttccagattctgaaacaactcatgcatatgcttttttgatatagttt |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37492966 |
aattcagcatttttggggtgccaaccaaaagctttaatctaatgcaaccaagtttccagattctgaaacaactcatgcatatgcttttttgatatagttt |
37492867 |
T |
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| Q |
208 |
tatttcttgtccctgcttttctcattttacatct----ttaagagatttcttctcgtctgtg |
265 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |
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| T |
37492866 |
tatttcttgtccctgcttttctcattttacatctttaattaagagatttcttctcgtttgtg |
37492805 |
T |
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