View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11351_high_3 (Length: 256)
Name: NF11351_high_3
Description: NF11351
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11351_high_3 |
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Alignment Details
Target: chr4 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 16 - 247
Target Start/End: Original strand, 3678939 - 3679169
Alignment:
| Q |
16 |
caaattaccaaccaatacacatttgagtgtacaattaactaactaaatacacacttaagatattattgtaactttgattcattcataaaccatagtgaca |
115 |
Q |
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| T |
3678939 |
caaattaccaaccaagacacatttgagtgtacaattaactaactaaatacacacttaagatattattgtaactttgattcattcataaaccatagtgaca |
3679038 |
T |
|
| Q |
116 |
atgcgtctcatatattctagaatgaggaaagttgaaatatttctttcttcctatagtgacaatgcgtctcatttagtatatttttctcctttcaatattg |
215 |
Q |
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| T |
3679039 |
atgcgtctcatatattctagaatgaggaaagttgaaatatttctttc-tcctatagtcacaatgcgtctcatttagtatatttttctcctttcaatattg |
3679137 |
T |
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| Q |
216 |
taaatttatttcattcatttaatatttcatct |
247 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
3679138 |
taaatttatttcattcatttaatatttcatct |
3679169 |
T |
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