View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11351_low_3 (Length: 414)
Name: NF11351_low_3
Description: NF11351
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11351_low_3 |
 | |
|
| [»] scaffold0008 (1 HSPs) |
| | |
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Alignment Details
Target: chr5 (Bit Score: 265; Significance: 1e-148; HSPs: 13)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 79 - 407
Target Start/End: Complemental strand, 25762791 - 25762464
Alignment:
| Q |
79 |
gttggcttaggaggagtaggtgacatgttgcttttccgtgcactcttcctactcgtccctgttgatattgtctatgagccctatgtctcttgctcctggg |
178 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||| || |
|
|
| T |
25762791 |
gttggcttaggaggagtaggtgacatgttgcttttccgtgcactcttcctactcgtccctgttgatcttgtctgtgaaccctatgtctcttgctccttgg |
25762692 |
T |
|
| Q |
179 |
agtcaacaatctcccatagcgaaggggaccgccttgtcgatcgaatgctttgcttatctttcttaggagctcctttgtttggtgaccttatttggcgatg |
278 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |
|
|
| T |
25762691 |
agtcaacaatctcccatagcgaaggggaccgccttgtcgatcgaatgctttgcttatctttcttaggagctcctttg-gtggtgaccttatttggcggtg |
25762593 |
T |
|
| Q |
279 |
gacgcatagaggtggtctctagtaaaacaaattgccggaattgttccttcaaatgcaacttcatgttgtaatcggcatccttgaactgagcctgcaatat |
378 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||| |||||||||||||||||| || ||||||||||||||||| ||||||||| ||||||||||||| |
|
|
| T |
25762592 |
gacgcatagaggtggtctctggtaaaacaaattgcctgaattgttccttcaaatgaaaattcatgttgtaatcggcgtccttgaaccgagcctgcaatat |
25762493 |
T |
|
| Q |
379 |
tttaagaaaactgtcattctggtctgtgc |
407 |
Q |
| |
|
| ||||||||||||||||||||| ||||| |
|
|
| T |
25762492 |
tgtaagaaaactgtcattctggtttgtgc |
25762464 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 79 - 407
Target Start/End: Original strand, 23351041 - 23351368
Alignment:
| Q |
79 |
gttggcttaggaggagtaggtgacatgttgcttttccgtgcactcttcctactcgtccctgttgatattgtctatgagccctatgtctcttgctcctggg |
178 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||| |||| |||||||||||| |||| |
|
|
| T |
23351041 |
gttggcttaggaggagtaggtgacatgttgcttttccgtgcactcttcctactggtccctgttgatcttgtctgtgaaccctgtgtctcttgctcttggg |
23351140 |
T |
|
| Q |
179 |
agtcaacaatctcccatagcgaaggggaccgccttgtcgatcgaatgctttgcttatctttcttaggagctcctttgtttggtgaccttatttggcgatg |
278 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| || |
|
|
| T |
23351141 |
agtcaacaatctcccatagtgaaggggaccgccttgtcgatcgaatgctttgcttatctttcttgggagctcctttg-gtggtgaccttatttggcggtg |
23351239 |
T |
|
| Q |
279 |
gacgcatagaggtggtctctagtaaaacaaattgccggaattgttccttcaaatgcaacttcatgttgtaatcggcatccttgaactgagcctgcaatat |
378 |
Q |
| |
|
|||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |
|
|
| T |
23351240 |
gacgcatagaggtgatctctggtaaaacaaattgttggaattgttccttcaaatgcaacttcatgttgtaatcggcgtccttgaaccgagcctgcaatat |
23351339 |
T |
|
| Q |
379 |
tttaagaaaactgtcattctggtctgtgc |
407 |
Q |
| |
|
| ||||||||||||||||||||| ||||| |
|
|
| T |
23351340 |
tgtaagaaaactgtcattctggtatgtgc |
23351368 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 83 - 406
Target Start/End: Original strand, 20234213 - 20234535
Alignment:
| Q |
83 |
gcttaggaggagtaggtgacatgttgcttttccgtgcactcttcctactcgtccctgttgatattgtctatgagccctatgtctcttgctcctgggagtc |
182 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||| |||| ||||||||||||||| ||||| |
|
|
| T |
20234213 |
gcttaggaggagcaggtgacatgttgcttttccgtgcactcttcctactcgtccctgttgatcttgtatgtgaaccctgtgtctcttgctcctgtgagtc |
20234312 |
T |
|
| Q |
183 |
aacaatctcccatagcgaaggggaccgccttgtcgatcgaatgctttgcttatctttcttaggagctcctttgtttggtgaccttatttggcgatggacg |
282 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||| |||||| |
|
|
| T |
20234313 |
aacaatctcccatagcaaaggggaccgccttgtcgatcgaatgttttgcttatctttcttaggagctcctatg-gtggtgaccttatttggcggtggacg |
20234411 |
T |
|
| Q |
283 |
catagaggtggtctctagtaaaacaaattgccggaattgttccttcaaatgcaacttcatgttgtaatcggcatccttgaactgagcctgcaatatttta |
382 |
Q |
| |
|
|||| || |||||| | ||||||||||||| |||||||||||||||||||||||| || ||||||||| ||||||||| |||||||||||||| || |
|
|
| T |
20234412 |
catatagttggtctttggtaaaacaaattgttggaattgttccttcaaatgcaactccacgttgtaatcaatgtccttgaaccgagcctgcaatattgta |
20234511 |
T |
|
| Q |
383 |
agaaaactgtcattctggtctgtg |
406 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
20234512 |
agaaaactgtcattctggtctgtg |
20234535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 80 - 401
Target Start/End: Original strand, 16491783 - 16492102
Alignment:
| Q |
80 |
ttggcttaggaggagtaggtgacatgttgcttttccgtgcactcttcctactcgtccctgttgatattgtctatgagccctatgtctcttgctcctggga |
179 |
Q |
| |
|
||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||||| ||||| ||| |||| |||||||||||||||||| |
|
|
| T |
16491783 |
ttggcttaggaggagtatgagacatgttgcttttccgtgcactctttctactcgtccctgttgattttgtcagtgaaccctgtgtctcttgctcctggga |
16491882 |
T |
|
| Q |
180 |
gtcaacaatctcccatagcgaaggggaccgccttgtcgatcgaatgctttgcttatctttcttaggagctcctttgtttggtgaccttatttggcgatgg |
279 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||| ||| |
|
|
| T |
16491883 |
gtcaacaatctcccatagggaaggggaccgccttgtcgatcgaatgctttgcttatctttctttggagctcctttg-gtggtgaacttatttggcggtgg |
16491981 |
T |
|
| Q |
280 |
acgcatagaggtggtctctagtaaaacaaattgccggaattgttccttcaaatgcaacttcatgttgtaatcggcatccttgaactgagcctgcaatatt |
379 |
Q |
| |
|
||||||||||||||||||| |||||||||||| || ||||||||||| | |||||||||||||||||||||||| |||||||| ||||||||||| | |
|
|
| T |
16491982 |
acgcatagaggtggtctctggtaaaacaaattttcgaaattgttcctttatatgcaacttcatgttgtaatcggcgtccttgaatcgagcctgcaat-gt |
16492080 |
T |
|
| Q |
380 |
ttaagaaaactgtcattctggt |
401 |
Q |
| |
|
||| |||||||||||| |||| |
|
|
| T |
16492081 |
gtaaaaaaactgtcattttggt |
16492102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 79 - 255
Target Start/End: Original strand, 34828221 - 34828394
Alignment:
| Q |
79 |
gttggcttaggaggagtaggtgacatgttgcttttccgtgcactcttcctactcgtccctgttgatattgtctatgagccctatgtctcttgctcctggg |
178 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||| |||| |
|
|
| T |
34828221 |
gttggcttaggaaaagtaggtgacatgttgcttttccgtgcactcttcctactcgtccctgttgatcttgtctatgaaccctgtgtctcttgctcatggg |
34828320 |
T |
|
| Q |
179 |
agtcaacaatctcccatagcgaaggggaccgccttgtcgatcgaatgctttgcttatctttcttaggagctcctttg |
255 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
34828321 |
agtcaacaatctcccatagcgaaggggaccgccttgtcgatcg---gctttgcttatctttcttaggagctcctttg |
34828394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 258 - 407
Target Start/End: Original strand, 34830507 - 34830659
Alignment:
| Q |
258 |
tggtgaccttatttggcgatggacgcatagaggtggtctctagtaaaacaaattgccggaattgttccttcaaatgcaacttcatgttgtaatcggc--- |
354 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
34830507 |
tggtgaccttatttggcggtggacgcatagaggtggtctctggtaaaacaaatttccggaattgttcattcaaatgcaacttcatgttgtaatcggcggt |
34830606 |
T |
|
| Q |
355 |
atccttgaactgagcctgcaatattttaagaaaactgtcattctggtctgtgc |
407 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
34830607 |
gtccttgaactgagcctgcaatatcgtaagaaaactgtcattctggtctgtgc |
34830659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 11 - 203
Target Start/End: Original strand, 31058603 - 31058796
Alignment:
| Q |
11 |
ccttttcaataaatttatgcatccaaattgggatttggtctttgtgtggtatgttgactttaaccggtgttggcttaggaggagtaggtgacatgttgct |
110 |
Q |
| |
|
||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||| ||||||||||| |
|
|
| T |
31058603 |
ccttttcaataaattcatgcatccaatatgggatttggtctttgtgtggtatgttgactttaaccagaattggcttaggaggattaggagacatgttgct |
31058702 |
T |
|
| Q |
111 |
tttccgtgcactcttcctactcgtccctgttg-atattgtctatgagccctatgtctcttgctcctgggagtcaacaatctcccatagcgaagg |
203 |
Q |
| |
|
|||||||||||| | ||||| |||||||||| || || | | ||| | | ||| | ||| ||||||||||||||||||||||| |||||||| |
|
|
| T |
31058703 |
tttccgtgcactttctctacttgtccctgttgaattttttatgtgaagcatgtgtttgttgatcctgggagtcaacaatctcccagagcgaagg |
31058796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 11 - 291
Target Start/End: Original strand, 31043377 - 31043657
Alignment:
| Q |
11 |
ccttttcaataaatttatgcatccaaattgggatttggtctttgtgtggtatgttgactttaaccggtgttggcttaggaggagtaggtgacatgttgct |
110 |
Q |
| |
|
||||||||||||||| |||||||||| ||||||||| |||||||||||||||| |||||||||| | |||||||||||||| || ||||||||||| |
|
|
| T |
31043377 |
ccttttcaataaattcatgcatccaatgtgggatttgttctttgtgtggtatgtggactttaaccagaattggcttaggaggattataagacatgttgct |
31043476 |
T |
|
| Q |
111 |
tttccgtgcactcttcctactcgtccctgttgatattgtctatgagccctatgtctcttgctcctgggagtcaacaatctcccatagcgaaggggaccgc |
210 |
Q |
| |
|
|||||||||||| | ||||| ||||||||||| |||| | ||| | ||| | ||| ||||||||||||||||||||| | ||| |||| || | |
|
|
| T |
31043477 |
tttccgtgcactttctctacttgtccctgttgaatttgtatgtgaagcacgtgtttgttgatcctgggagtcaacaatctcctagagcaaaggcgatcat |
31043576 |
T |
|
| Q |
211 |
cttgtcgatcgaatgctttgcttatctttcttaggagctcctttgtttggtgaccttatttggcgatggacgcatagaggt |
291 |
Q |
| |
|
|||| || |||| | || |||| |||||| ||||||||||| |||||| || ||||||| ||||||||||||||| |
|
|
| T |
31043577 |
tttgttgactaaatgatatgtttatttttctttggagctcctttagggggtgactttttttggcggtggacgcatagaggt |
31043657 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 20234107 - 20234192
Alignment:
| Q |
1 |
acatatgtaaccttttcaataaatttatgcatccaaattgggatttggtctttgtgtggtatgttgactttaaccggtgttggctt |
86 |
Q |
| |
|
|||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20234107 |
acatctgtaaccctttcaataaatttatatatccaaattgggatttggtctttgtgtggtatgttgactttaaccggtgttggctt |
20234192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 34828119 - 34828204
Alignment:
| Q |
1 |
acatatgtaaccttttcaataaatttatgcatccaaattgggatttggtctttgtgtggtatgttgactttaaccggtgttggctt |
86 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||| |
|
|
| T |
34828119 |
acatctgtaaccttttcaataaatttatgcatcaaaattgggatttggtctttgtgtggtatgttgaatttaatcggtgttggctt |
34828204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 23350939 - 23351024
Alignment:
| Q |
1 |
acatatgtaaccttttcaataaatttatgcatccaaattgggatttggtctttgtgtggtatgttgactttaaccggtgttggctt |
86 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||| ||||||||| |
|
|
| T |
23350939 |
acatctgtaaccttttcaataaatttatgcatccaaattgagatttggtctttatgtgatatgttgactttaaccgatgttggctt |
23351024 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 25762892 - 25762808
Alignment:
| Q |
1 |
acatatgtaaccttttcaataaatttatgcatccaaattgggatttggtctttgtgtggtatgttgactttaaccggtgttggctt |
86 |
Q |
| |
|
|||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |
|
|
| T |
25762892 |
acatctgtaaccttttcaataaagttatgcatccaaattgggatttggtctttgtgttgtatgttgacttt-accggtgttggctt |
25762808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 16491687 - 16491761
Alignment:
| Q |
8 |
taaccttttcaataaatttatgcatccaaattgggatttggtctttgtgtggtatgttgactttaaccggtgttg |
82 |
Q |
| |
|
|||||||||||||||| | |||||||||||||||||||||||||||||||||||| | ||||||||| ||||||| |
|
|
| T |
16491687 |
taaccttttcaataaagtcatgcatccaaattgggatttggtctttgtgtggtatatagactttaacgggtgttg |
16491761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 253; Significance: 1e-140; HSPs: 10)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 79 - 407
Target Start/End: Complemental strand, 19219684 - 19219357
Alignment:
| Q |
79 |
gttggcttaggaggagtaggtgacatgttgcttttccgtgcactcttcctactcgtccctgttgatattgtctatgagccctatgtctcttgctcctggg |
178 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||| || | |||||||||||| |||| |
|
|
| T |
19219684 |
gttggcttaggagaagtaggtgacatgttgcttttccgtgcactcttcctactcgtccctgttgatcttgtttgtgaaccttgtgtctcttgctcttggg |
19219585 |
T |
|
| Q |
179 |
agtcaacaatctcccatagcgaaggggaccgccttgtcgatcgaatgctttgcttatctttcttaggagctcctttgtttggtgaccttatttggcgatg |
278 |
Q |
| |
|
|||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |
|
|
| T |
19219584 |
agtcaacaatcttccatagcgaaagggacctccttgtcgatcgaatgctttgcttatctttcttaggagctcctttg-gtggtgaccttatttggcggtg |
19219486 |
T |
|
| Q |
279 |
gacgcatagaggtggtctctagtaaaacaaattgccggaattgttccttcaaatgcaacttcatgttgtaatcggcatccttgaactgagcctgcaatat |
378 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |
|
|
| T |
19219485 |
gacgcatagaggtggtctctggtaaaacaaattgccggaattgttccttcaaatgcaacttcatgttgtaatcggcgtccttgaaccgagcctgcaatat |
19219386 |
T |
|
| Q |
379 |
tttaagaaaactgtcattctggtctgtgc |
407 |
Q |
| |
|
| ||||||||||||||||||||||||||| |
|
|
| T |
19219385 |
tgtaagaaaactgtcattctggtctgtgc |
19219357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 79 - 405
Target Start/End: Original strand, 41255026 - 41255351
Alignment:
| Q |
79 |
gttggcttaggaggagtaggtgacatgttgcttttccgtgcactcttcctactcgtccctgttgatattgtctatgagccctatgtctcttgctcctggg |
178 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| | ||| ||||||||||||||||| |||| |
|
|
| T |
41255026 |
gttggcttaggaggagtagttgacatgttgcttttccgtgcactcttcctactcgtccctgttgatcttgtttgtgaaccctatgtctcttgctcatggg |
41255125 |
T |
|
| Q |
179 |
agtcaacaatctcccatagcgaaggggaccgccttgtcgatcgaatgctttgcttatctttcttaggagctcctttgtttggtgaccttatttggcgatg |
278 |
Q |
| |
|
|||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| || |
|
|
| T |
41255126 |
agtcaacaatctcccaaagcgaaggggactgccttgtcgatcgaatgctttacttatctttcttaggagctcctttg-atggtgaccttatttggcggtg |
41255224 |
T |
|
| Q |
279 |
gacgcatagaggtggtctctagtaaaacaaattgccggaattgttccttcaaatgcaacttcatgttgtaatcggcatccttgaactgagcctgcaatat |
378 |
Q |
| |
|
|||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||| |
|
|
| T |
41255225 |
gacgcataaaggtggtctctggtaaaacaaattgtcggaattgttccttcaaatgcaacttcatgttgtaatcggcgtccttgaaccgagcttgcaatat |
41255324 |
T |
|
| Q |
379 |
tttaagaaaactgtcattctggtctgt |
405 |
Q |
| |
|
| |||| |||||||||||||||||||| |
|
|
| T |
41255325 |
tgtaaggaaactgtcattctggtctgt |
41255351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 80 - 376
Target Start/End: Complemental strand, 15893056 - 15892762
Alignment:
| Q |
80 |
ttggcttaggaggagtaggtgacatgttgcttttccgtgcactcttcctactcgtccctgttgatattgtctatgagccctatgtctcttgctcctggga |
179 |
Q |
| |
|
|||||||||||| |||||| |||||||||||||||||||||||||| ||| |||||| ||||||| ||| || ||| |||| |||||||||||||||||| |
|
|
| T |
15893056 |
ttggcttaggagaagtaggagacatgttgcttttccgtgcactctttctaatcgtccatgttgattttgactgtgaaccctgtgtctcttgctcctggga |
15892957 |
T |
|
| Q |
180 |
gtcaacaatctcccatagcgaaggggaccgccttgtcgatcgaatgctttgcttatctttcttaggagctcctttgtttggtgaccttatttggcgatgg |
279 |
Q |
| |
|
||| |||||||||||||| | |||| |||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||| | ||| |
|
|
| T |
15892956 |
gtcgacaatctcccataggggagggtcccgccttgtcgatcgaatgctttgcttatcattc-taggagctcctttg-gtggtgaccttatttggtggtgg |
15892859 |
T |
|
| Q |
280 |
acgcatagaggtggtctctagtaaaacaaattgccggaattgttccttcaaatgcaacttcatgttgtaatcggcatccttgaactgagcctgcaat |
376 |
Q |
| |
|
|| |||||||||||||||| ||||||||||||| ||||||||||| |||| ||| || ||||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
15892858 |
acacatagaggtggtctctggtaaaacaaattgtcggaattgttctttcatatgaaatttcatgttgtaatcggcgtccttgaatcgagcctgcaat |
15892762 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 19219779 - 19219701
Alignment:
| Q |
8 |
taaccttttcaataaatttatgcatccaaattgggatttggtctttgtgtggtatgttgactttaaccggtgttggctt |
86 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
19219779 |
taaccttttcaataaatttatgcatccaaattgaactttggtctttgtgtggtatgttgactttaaacggtgttggctt |
19219701 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 41254943 - 41255009
Alignment:
| Q |
20 |
taaatttatgcatccaaattgggatttggtctttgtgtggtatgttgactttaaccggtgttggctt |
86 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
41254943 |
taaatttatgcatccaaattgggatttggtctttgtgtggtatattgactttaaccggtgttggctt |
41255009 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 15893159 - 15893074
Alignment:
| Q |
1 |
acatatgtaaccttttcaataaatttatgcatccaaattgggatttggtctttgtgtggtatgttgactttaaccggtgttggctt |
86 |
Q |
| |
|
|||| ||||||||||| |||||| | |||||| ||||||||||||||||||||||||||||||| ||||||||| |||||| |||| |
|
|
| T |
15893159 |
acatctgtaaccttttgaataaagtcatgcattcaaattgggatttggtctttgtgtggtatgtggactttaacaggtgtttgctt |
15893074 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 76
Target Start/End: Complemental strand, 44712060 - 44711994
Alignment:
| Q |
10 |
accttttcaataaatttatgcatccaaattgggatttggtctttgtgtggtatgttgactttaaccg |
76 |
Q |
| |
|
|||||||||||||| | ||||||||||||||| |||||||||||||||||||||| ||||||||||| |
|
|
| T |
44712060 |
accttttcaataaagtcatgcatccaaattggaatttggtctttgtgtggtatgtcgactttaaccg |
44711994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 19337373 - 19337456
Alignment:
| Q |
10 |
accttttcaataaatttatgcatccaaattgggatttggtctttgtgtggtatgttgactttaaccggtgttggcttaggagga |
93 |
Q |
| |
|
||||||||| |||||| |||||||||| || ||||| ||||||||||||||||| ||||| |||||| |||||||||||||| |
|
|
| T |
19337373 |
accttttcattaaattcatgcatccaatgtgagatttagtctttgtgtggtatgtggacttcaaccggaattggcttaggagga |
19337456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 179 - 214
Target Start/End: Complemental strand, 12630416 - 12630381
Alignment:
| Q |
179 |
agtcaacaatctcccatagcgaaggggaccgccttg |
214 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||| |
|
|
| T |
12630416 |
agtcaataatctcccatagcgaaggggaccgccttg |
12630381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 283 - 351
Target Start/End: Original strand, 25009839 - 25009907
Alignment:
| Q |
283 |
catagaggtggtctctagtaaaacaaattgccggaattgttccttcaaatgcaacttcatgttgtaatc |
351 |
Q |
| |
|
||||||||| |||||| |||||||||| | | |||||||| |||| ||||| ||||||||||||||| |
|
|
| T |
25009839 |
catagaggttgtctctggtaaaacaaactattgaaattgttctttcatatgcatcttcatgttgtaatc |
25009907 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 253; Significance: 1e-140; HSPs: 10)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 79 - 407
Target Start/End: Complemental strand, 50517440 - 50517113
Alignment:
| Q |
79 |
gttggcttaggaggagtaggtgacatgttgcttttccgtgcactcttcctactcgtccctgttgatattgtctatgagccctatgtctcttgctcctggg |
178 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||| || |||||||||||||| |
|
|
| T |
50517440 |
gttggcttaggacgagtaggtgacatgttgcttttccgtgcactcttcctactcgtccctgttgatcttgtctgtgaaccctgtggctcttgctcctggg |
50517341 |
T |
|
| Q |
179 |
agtcaacaatctcccatagcgaaggggaccgccttgtcgatcgaatgctttgcttatctttcttaggagctcctttgtttggtgaccttatttggcgatg |
278 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | || |
|
|
| T |
50517340 |
agtcaacaatctcccatagcgaaggggaccgccttgtcgatcgaatgctttgcttatctttcttaggagctcctttg-gtggtgaccttatttggtggtg |
50517242 |
T |
|
| Q |
279 |
gacgcatagaggtggtctctagtaaaacaaattgccggaattgttccttcaaatgcaacttcatgttgtaatcggcatccttgaactgagcctgcaatat |
378 |
Q |
| |
|
|||||||||||||||||| | |||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |
|
|
| T |
50517241 |
gacgcatagaggtggtctttggtaaaaaaaattgtcggaattgttccttcaaatgcaacttcatgttgtaatcggcgtccttgaaccgagcctgcaatat |
50517142 |
T |
|
| Q |
379 |
tttaagaaaactgtcattctggtctgtgc |
407 |
Q |
| |
|
| ||||||||||||||||||| ||||||| |
|
|
| T |
50517141 |
tgtaagaaaactgtcattctgctctgtgc |
50517113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 79 - 401
Target Start/End: Complemental strand, 33804388 - 33804067
Alignment:
| Q |
79 |
gttggcttaggaggagtaggtgacatgttgcttttccgtgcactcttcctactcgtccctgttgatattgtctatgagccctatgtctcttgctcctggg |
178 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| | ||| || | ||||||||||||||||| |
|
|
| T |
33804388 |
gttggcttaggaggagtaggtgacatgttgctttttcgtgcactcttcctactcgtccctgttgatcttgtttgtgaaccttgtgtctcttgctcctggg |
33804289 |
T |
|
| Q |
179 |
agtcaacaatctcccatagcgaaggggaccgccttgtcgatcgaatgctttgcttatctttcttaggagctcctttgtttggtgaccttatttggcgatg |
278 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| || |
|
|
| T |
33804288 |
agtcaacaatctcccatagcgaaggggaccgccttgtcgatcgaatgttttgcttatctttcttaggagctcctttg-gtggtgaccttatttggcggtg |
33804190 |
T |
|
| Q |
279 |
gacgcatagaggtggtctctagtaaaacaaattgccggaattgttccttcaaatgcaacttcatgttgtaatcggcatccttgaactgagcctgcaatat |
378 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||| |
|
|
| T |
33804189 |
gacgcatagaggtggtctctggtaaaacaaattgtcggaattgttccttcaaatgcaacttcatgttgtaatcggcgtccttcaaccgagcctgcaatat |
33804090 |
T |
|
| Q |
379 |
tttaagaaaactgtcattctggt |
401 |
Q |
| |
|
| |||||||||| |||||||||| |
|
|
| T |
33804089 |
tgtaagaaaactatcattctggt |
33804067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 79 - 403
Target Start/End: Original strand, 45908435 - 45908756
Alignment:
| Q |
79 |
gttggcttaggaggagtaggtgacatgttgcttttccgtgcactcttcctactcgtccctgttgatattgtctatgagccctatgtctcttgctcctggg |
178 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||| |
|
|
| T |
45908435 |
gttggcttaggaagagtaggtgacatgttgctttttcgtgcactcttcctactcgtccctgttgatcttgtctatgaaccctgtgtctcttgctcctggg |
45908534 |
T |
|
| Q |
179 |
agtcaacaatctcccatagcgaaggggaccgccttgtcgatcgaatgctttgcttatctttcttaggagctcctttgtttggtgaccttatttggcgatg |
278 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||| |||||||||||||||||| || |
|
|
| T |
45908535 |
agtcaacaatctcccatagcgaaggggaccgccttgtcgatcgaa-gttttgcttatctttcttatgagctcctttg-gtggtgaccttatttggcggtg |
45908632 |
T |
|
| Q |
279 |
gacgcatagaggtggtctctagtaaaacaaattgccggaattgttccttcaaatgcaacttcatgttgtaatcggcatccttgaactgagcctgcaatat |
378 |
Q |
| |
|
|||||||| ||||||||||| |||||| |||||| |||||||||| ||||||||||||||||||||||||||| || ||||||||| ||||||||||||| |
|
|
| T |
45908633 |
gacgcatataggtggtctctggtaaaataaattgtcggaattgtttcttcaaatgcaacttcatgttgtaatc-gcgtccttgaaccgagcctgcaatat |
45908731 |
T |
|
| Q |
379 |
tttaagaaaactgtcattctggtct |
403 |
Q |
| |
|
| ||||||||||||||||||||||| |
|
|
| T |
45908732 |
tgtaagaaaactgtcattctggtct |
45908756 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 79 - 407
Target Start/End: Original strand, 44710684 - 44710992
Alignment:
| Q |
79 |
gttggcttaggaggagtaggtgacatgttgcttttccgtgcactcttcctactcgtccctgttgatattgtctatgagccctatgtctcttgctcctggg |
178 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||| ||| || | |||| |||||||| |
|
|
| T |
44710684 |
gttggcttaggaggagtaggtgacatgttgcttttccatgcactcttcctattcgtccctgttgatcttgtctgtgaaccttgtgtcccttgctcc---- |
44710779 |
T |
|
| Q |
179 |
agtcaacaatctcccatagcgaaggggaccgccttgtcgatcgaatgctttgcttatctttcttaggagctcctttgtttggtgaccttatttggcgatg |
278 |
Q |
| |
|
|| || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |
|
|
| T |
44710780 |
---------------atggcaaaggggaccaccttgtcgatcgaatgctttgcttatctttcttaggagctcctttggt-ggtgaccttatttggcgatg |
44710863 |
T |
|
| Q |
279 |
gacgcatagaggtggtctctagtaaaacaaattgccggaattgttccttcaaatgcaacttcatgttgtaatcggcatccttgaactgagcctgcaatat |
378 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |
|
|
| T |
44710864 |
gacgcatagaggtggtctctagtaaaacaaattgccggaatcgttccttcaaatgcaacttcatgttgtaatcggcgtccttgaaccgagcctgcaatat |
44710963 |
T |
|
| Q |
379 |
tttaagaaaactgtcattctggtctgtgc |
407 |
Q |
| |
|
| ||||||||||||||||||||| ||||| |
|
|
| T |
44710964 |
tgtaagaaaactgtcattctggtatgtgc |
44710992 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 80 - 376
Target Start/End: Original strand, 12865379 - 12865672
Alignment:
| Q |
80 |
ttggcttaggaggagtaggtgacatgttgcttttccgtgcactcttcctactcgtccctgttgatattgtctatgagccctatgtctcttgctcctggga |
179 |
Q |
| |
|
||||| || |||||||||| |||||||| ||||| | |||||| || ||||| |||||||||||| |||| | | | |||| ||| | ||| || ||||| |
|
|
| T |
12865379 |
ttggcataagaggagtaggagacatgtttctttttcatgcactttttctacttgtccctgttgattttgtttgtcaaccctgtgttttttgttcttggga |
12865478 |
T |
|
| Q |
180 |
gtcaacaatctcccatagcgaaggggaccgccttgtcgatcgaatgctttgcttatctttcttaggagctcctttgtttggtgaccttatttggcgatgg |
279 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||| |||| ||||||| |||||||||||||||||| || |
|
|
| T |
12865479 |
gtcaacaatctcccatagcgaaggggaccaccttatcgatcgaatggtttgcttatctttctttggagttcctttg-gtggtgaccttatttggcggcgg |
12865577 |
T |
|
| Q |
280 |
acgcatagaggtggtctctagtaaaacaaattgccggaattgttccttcaaatgcaacttcatgttgtaatcggcatccttgaactgagcctgcaat |
376 |
Q |
| |
|
| ||||||||||| |||| || |||||| || ||||||||||| |||| ||||| |||||||||||||||||| ||||||||| |||||| |||| |
|
|
| T |
12865578 |
atgcatagaggtgttctccggt--aacaaactgtcggaattgttctttcatatgcaccttcatgttgtaatcggcgtccttgaaccgagcctacaat |
12865672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 45908333 - 45908418
Alignment:
| Q |
1 |
acatatgtaaccttttcaataaatttatgcatccaaattgggatttggtctttgtgtggtatgttgactttaaccggtgttggctt |
86 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
45908333 |
acatctgtaaccttttcaataaatttatgcatccaaattgggatttggtctttgtgtggtatattgactttaaccggtgttggctt |
45908418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 33804489 - 33804404
Alignment:
| Q |
1 |
acatatgtaaccttttcaataaatttatgcatccaaattgggatttggtctttgtgtggtatgttgactttaaccggtgttggctt |
86 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |
|
|
| T |
33804489 |
acatttgtaaccttttcaataaatttatgcatccaaattgggatttggtttttgtgtggtatgttaactttaaccggtgttggctt |
33804404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 44710582 - 44710667
Alignment:
| Q |
1 |
acatatgtaaccttttcaataaatttatgcatccaaattgggatttggtctttgtgtggtatgttgactttaaccggtgttggctt |
86 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||||||||||| |
|
|
| T |
44710582 |
acatctgtaaccttttcaataaatttatgcatccaaattaggatttggtctttgtgtggtatattaactttaaccggtgttggctt |
44710667 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 12865284 - 12865361
Alignment:
| Q |
9 |
aaccttttcaataaatttatgcatccaaattgggatttggtctttgtgtggtatgttgactttaaccggtgttggctt |
86 |
Q |
| |
|
||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||| |
|
|
| T |
12865284 |
aacctttctaataaattcatgcatccaaattgggatttggtctttgtgtggtatgtggactttaaccagtgctggctt |
12865361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 50517543 - 50517457
Alignment:
| Q |
1 |
acatatgtaaccttttcaataaatttatgcatccaaattgggatttggtctttgtgtggtatgttgactttaa-ccggtgttggctt |
86 |
Q |
| |
|
|||| |||| |||||||||||||||||||||| |||||||||||||||||||||||| |||| || ||||||| | ||||||||||| |
|
|
| T |
50517543 |
acatctgtacccttttcaataaatttatgcattcaaattgggatttggtctttgtgtcgtatatttactttaatcgggtgttggctt |
50517457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 245; Significance: 1e-136; HSPs: 7)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 79 - 407
Target Start/End: Complemental strand, 23255810 - 23255483
Alignment:
| Q |
79 |
gttggcttaggaggagtaggtgacatgttgcttttccgtgcactcttcctactcgtccctgttgatattgtctatgagccctatgtctcttgctcctggg |
178 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||| |||| |||||||||||| |||| |
|
|
| T |
23255810 |
gttggcttaggaggagtaggtgacatgttgctttttcgtgcactcttcctactcgtccctgttgatcttgtctgtgaaccctgtgtctcttgctcttggg |
23255711 |
T |
|
| Q |
179 |
agtcaacaatctcccatagcgaaggggaccgccttgtcgatcgaatgctttgcttatctttcttaggagctcctttgtttggtgaccttatttggcgatg |
278 |
Q |
| |
|
||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||| || |
|
|
| T |
23255710 |
agtcaacaatctcccatagcgaaagggactgccttgtcgatcgaattctttgcttatctttcttaggagctcctttggtt-gtgaccttatttggcggtg |
23255612 |
T |
|
| Q |
279 |
gacgcatagaggtggtctctagtaaaacaaattgccggaattgttccttcaaatgcaacttcatgttgtaatcggcatccttgaactgagcctgcaatat |
378 |
Q |
| |
|
|||||||||| ||||||||| ||||||||||||| || |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
23255611 |
gacgcatagatgtggtctctggtaaaacaaattgtcgaaattgttccttcaaattcaacttcatgttgtaatcggcgtccttgaactgagcctgcaatat |
23255512 |
T |
|
| Q |
379 |
tttaagaaaactgtcattctggtctgtgc |
407 |
Q |
| |
|
| ||||||||||||||||||| ||||||| |
|
|
| T |
23255511 |
tgtaagaaaactgtcattctgatctgtgc |
23255483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 79 - 401
Target Start/End: Complemental strand, 757017 - 756697
Alignment:
| Q |
79 |
gttggcttaggaggagtaggtgacatgttgcttttccgtgcactcttcctactcgtccctgttgatattgtctatgagccctatgtctcttgctcctggg |
178 |
Q |
| |
|
|||||||||||||||||||| ||||||||| ||||| |||||||||| |||||||||| |||| ||||||| | ||| || | ||||||||||||||||| |
|
|
| T |
757017 |
gttggcttaggaggagtaggagacatgttgtttttctgtgcactctttctactcgtccatgttaatattgtatgtgaaccatgtgtctcttgctcctggg |
756918 |
T |
|
| Q |
179 |
agtcaacaatctcccatagcgaaggggaccgccttgtcgatcgaatgctttgcttatctttcttaggagctcctttgtttggtgaccttatttggcgatg |
278 |
Q |
| |
|
||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| | || |
|
|
| T |
756917 |
agtcaacaatctctcatagcgaagaagaccgccttgtcgatcgaatgatttgcttatctttcttaggagctcctttg-atggtgaccttatttggtggtg |
756819 |
T |
|
| Q |
279 |
gacgcatagaggtggtctctagtaaaacaaattgccggaattgttccttcaaatgcaacttcatgttgtaatcggcatccttgaactgagcctgcaatat |
378 |
Q |
| |
|
|||||||||||||| ||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||| |
|
|
| T |
756818 |
gacgcatagaggtgatctctggtaaaacaaattgtcggaattgttccttcatatgcaacttcatgttgtaatcggcgtccttgaaccgagcctgcaat-g |
756720 |
T |
|
| Q |
379 |
tttaagaaaactgtcattctggt |
401 |
Q |
| |
|
| ||| |||||||||||| |||| |
|
|
| T |
756719 |
tgtaaaaaaactgtcattttggt |
756697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 23255912 - 23255827
Alignment:
| Q |
1 |
acatatgtaaccttttcaataaatttatgcatccaaattgggatttggtctttgtgtggtatgttgactttaaccggtgttggctt |
86 |
Q |
| |
|
|||| |||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
23255912 |
acatctgtaaccttttcaataaatttaggcatccaaatcgggatttggtctttgtgcggtatgttgactttaaccggtgttggctt |
23255827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 13 - 202
Target Start/End: Original strand, 26674697 - 26674886
Alignment:
| Q |
13 |
ttttcaataaatttatgcatccaaattgggatttggtctttgtgtggtatgttgactttaaccggtgttggcttaggaggagtaggtgacatgttgcttt |
112 |
Q |
| |
|
||||||||| ||| |||||||||| | |||||||||||||||||||||||| |||| ||||| |||||||||||||| |||| ||||||||||||| |
|
|
| T |
26674697 |
ttttcaatagattcatgcatccaatgtaggatttggtctttgtgtggtatgtggactataaccaaaattggcttaggaggattaggagacatgttgcttt |
26674796 |
T |
|
| Q |
113 |
tccgtgcactcttcctactcgtccctgttgatattgtctatgagccctatgtctcttgctcctgggagtcaacaatctcccatagcgaag |
202 |
Q |
| |
|
||||| |||| || ||||| |||||| |||| |||| | ||| | | ||||| ||| |||| |||||||||||||||| | ||||||| |
|
|
| T |
26674797 |
tccgtacactttttctacttgtccctattgaatttgtttgtgaagcatgtgtctgttgatcctaggagtcaacaatctcctagagcgaag |
26674886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 757114 - 757036
Alignment:
| Q |
6 |
tgtaaccttttcaataaatttatgcatccaaattgggatttggtctttgtgtggtatgttgactttaaccggtgttggc |
84 |
Q |
| |
|
|||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |
|
|
| T |
757114 |
tgtaaccttttcaataaagtcatgcatccaaattgggatttggtctttgtgtggtatgtcgactttaacgggtgttggc |
757036 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 16667313 - 16667232
Alignment:
| Q |
9 |
aaccttttcaataaatttatgcatccaaattgggatttggtctttgtgtggtatgttgactttaaccggtgttggcttagga |
90 |
Q |
| |
|
||||||||||||||||| |||||||||| |||||||||||||||||||||||| | |||||||||||| ||||||||||| |
|
|
| T |
16667313 |
aaccttttcaataaattgatgcatccaatgtgggatttggtctttgtgtggtatatggactttaaccggaattggcttagga |
16667232 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 80 - 254
Target Start/End: Complemental strand, 16667221 - 16667047
Alignment:
| Q |
80 |
ttggcttaggaggagtaggtgacatgttgcttttccgtgcactcttcctactcgtccctgttgatattgtctatgagccctatgtctcttgctcctggga |
179 |
Q |
| |
|
||||||||||| || |||| |||||||||||||||||||||||||| ||||| || | || ||| |||| | ||| | | ||||| ||| ||||| || |
|
|
| T |
16667221 |
ttggcttaggaagattaggagacatgttgcttttccgtgcactctttctacttgttcatgctgaatttgtttgtgaagcatgtgtctgttgttcctgtga |
16667122 |
T |
|
| Q |
180 |
gtcaacaatctcccatagcgaaggggaccgccttgtcgatcgaatgctttgcttatctttcttaggagctccttt |
254 |
Q |
| |
|
| |||||||||| | |||||||| || | | ||||||| |||||| || |||| |||||| ||||||||||| |
|
|
| T |
16667121 |
ataaacaatctcctagagcgaaggcgatccctttgtcgaccgaatgaaatgtttatttttctttggagctccttt |
16667047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 234; Significance: 1e-129; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 86 - 407
Target Start/End: Original strand, 17310076 - 17310396
Alignment:
| Q |
86 |
taggaggagtaggtgacatgttgcttttccgtgcactcttcctactcgtccctgttgatattgtctatgagccctatgtctcttgctcctgggagtcaac |
185 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || |||| | ||| |||| |||||||||||||||||||||||| |
|
|
| T |
17310076 |
taggaggagtacgtgacatgttgcttttccgtgcactcttcctactcgtccctgtttatcttgtatgtgaaccctgtgtctcttgctcctgggagtcaac |
17310175 |
T |
|
| Q |
186 |
aatctcccatagcgaaggggaccgccttgtcgatcgaatgctttgcttatctttcttaggagctcctttgtttggtgaccttatttggcgatggacgcat |
285 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||| |
|
|
| T |
17310176 |
aatctcccatagcaaaggggaccgccttgtcgatcgaatgctttgcttatctttcttaggagctccttt-cgtggtgcccttatttggcagtggacgcat |
17310274 |
T |
|
| Q |
286 |
agaggtggtctctagtaaaacaaattgccggaattgttccttcaaatgcaacttcatgttgtaatcggcatccttgaactgagcctgcaatattttaaga |
385 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||| ||||| |
|
|
| T |
17310275 |
agaggtggtctctagtaaaacaaattgtcggaattgttccttcaaatgcaacttcatgttgtaatcggcgtccttgaaccgagcctgccatattgtaaga |
17310374 |
T |
|
| Q |
386 |
aaactgtcattctggtctgtgc |
407 |
Q |
| |
|
||||| |||||||||| ||||| |
|
|
| T |
17310375 |
aaactttcattctggtatgtgc |
17310396 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 79 - 399
Target Start/End: Complemental strand, 30214551 - 30214232
Alignment:
| Q |
79 |
gttggcttaggaggagtaggtgacatgttgcttttccgtgcactcttcctactcgtccctgttgatattgtctatgagccctatgtctcttgctcctggg |
178 |
Q |
| |
|
|||| |||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||| |||||| ||| || | ||||||||||||||||| |
|
|
| T |
30214551 |
gttgacttaggaggagtagatgacatgttgctttttcgtgcactctttgtactcgtccctgttgatcttgtctgtgaaccatgtgtctcttgctcctggg |
30214452 |
T |
|
| Q |
179 |
agtcaacaatctcccatagcgaaggggaccgccttgtcgatcgaatgctttgcttatctttcttaggagctcctttgtttggtgaccttatttggcgatg |
278 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| | || |
|
|
| T |
30214451 |
agtcaacaatctcccatagagaaggggaccgccttgtcgatcgaatgctttgcttatctttcttaggagctcatttg-gtggtgaccttatttggtggtg |
30214353 |
T |
|
| Q |
279 |
gacgcatagaggtggtctctagtaaaacaaattgccggaattgttccttcaaatgcaacttcatgttgtaatcggcatccttgaactgagcctgcaatat |
378 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
30214352 |
gacgcatagaggtggtctctggtaaaacaaattgccggaatttttccttcaaatgcaacttcatgttgtaatcggtgtccttgaactgagcctgcaatat |
30214253 |
T |
|
| Q |
379 |
tttaagaaaactgtcattctg |
399 |
Q |
| |
|
| ||| |||||| ||| |||| |
|
|
| T |
30214252 |
tgtaacaaaactatcagtctg |
30214232 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 13 - 365
Target Start/End: Complemental strand, 10926856 - 10926505
Alignment:
| Q |
13 |
ttttcaataaatttatgcatccaaattgggatttggtctttgtgtggtatgttgactttaaccggtgttggcttaggaggagtaggtgacatgttgcttt |
112 |
Q |
| |
|
|||||||||| ||| ||||||||| |||||||||||||||||| ||||||| |||||||||||| |||| | ||||| | || ||||||||||||| |
|
|
| T |
10926856 |
ttttcaataattttttgcatccaatgtgggatttggtctttgtgaggtatgtggactttaaccggaattggttgaggagtgttgggagacatgttgcttt |
10926757 |
T |
|
| Q |
113 |
tccgtgcactcttcctactcgtccctgttgatattgtctatgagccctatgtctcttgctcctgggagtcaacaatctcccatagcgaaggggaccgcct |
212 |
Q |
| |
|
|||||||||| || ||||| |||| |||||| |||| | ||| | | ||||| ||| || || ||||||||||||||| | |||||| | || || | |
|
|
| T |
10926756 |
tccgtgcactttttctacttgtccttgttgaatttgtatgtgaagcatgtgtctgttgatcttgagagtcaacaatctcctagagcgaatgtgattgctt |
10926657 |
T |
|
| Q |
213 |
tgtcgatcgaatgctttgcttatctttcttaggagctcctttgtttggtgaccttatttggcgatggacgcatagaggtggtctctagtaaaacaaattg |
312 |
Q |
| |
|
|||||| |||||| | || ||||||||||| | | ||||||| |||||||||| |||| ||||| |||||||||||| ||||| | |||| |||||| |
|
|
| T |
10926656 |
tgtcgaccgaatgatatgtttatctttctttgaaactccttt-agtggtgaccttttttgacgatgtacgcatagaggtcgtctccaacaaaataaattg |
10926558 |
T |
|
| Q |
313 |
ccggaattgttccttcaaatgcaacttcatgttgtaatcggcatccttgaact |
365 |
Q |
| |
|
| | |||||| | | ||||| ||||||||||||| | ||||||||||||| |
|
|
| T |
10926557 |
tcaaacttgttctctgatatgcaccttcatgttgtaaccagcatccttgaact |
10926505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 30214653 - 30214568
Alignment:
| Q |
1 |
acatatgtaaccttttcaataaatttatgcatccaaattgggatttggtctttgtgtggtatgttgactttaaccggtgttggctt |
86 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
30214653 |
acatctgtaaccttttcaataaatttatgcatccaaattgggatttggtctttgtgtggtatattgactttaaccggtgttggctt |
30214568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 29810919 - 29810847
Alignment:
| Q |
1 |
acatatgtaaccttttcaataaatttatgcatccaaattgggatttggtctttgtgtggtatgttgactttaa |
73 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
29810919 |
acatctgtaaccttttcaataaatttatgcatccaaattggaatttggtctttgtgtagtatgttgactttaa |
29810847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 39 - 143
Target Start/End: Original strand, 21198690 - 21198794
Alignment:
| Q |
39 |
tgggatttggtctttgtgtggtatgttgactttaaccggtgttggcttaggaggagtaggtgacatgttgcttttccgtgcactcttcctactcgtccct |
138 |
Q |
| |
|
||||||||||||||||| ||| ||||||||||||| ||| |||||||||||||| || | || |||||| |||| | ||| || || |||||||||||| |
|
|
| T |
21198690 |
tgggatttggtctttgtttgggatgttgactttaatcgggattggcttaggaggattatgagaaatgttgttttttcatgccctttttctactcgtccct |
21198789 |
T |
|
| Q |
139 |
gttga |
143 |
Q |
| |
|
||||| |
|
|
| T |
21198790 |
gttga |
21198794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 224; Significance: 1e-123; HSPs: 9)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 79 - 407
Target Start/End: Complemental strand, 48095750 - 48095431
Alignment:
| Q |
79 |
gttggcttaggaggagtaggtgacatgttgcttttccgtgcactcttcctactcgtccctgttgatattgtctatgagccctatgtctcttgctcctggg |
178 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| |||||| ||| |||| ||||||||||||||||| |
|
|
| T |
48095750 |
gttggcttaggaggagtaggtgacatgttgcttttccgtgcactcttcttactcgtcccagttgatcttgtctgtgaaccctgtgtctcttgctcctggg |
48095651 |
T |
|
| Q |
179 |
agtcaacaatctcccatagcgaaggggaccgccttgtcgatcgaatgctttgcttatctttcttaggagctcctttgtttggtgaccttatttggcgatg |
278 |
Q |
| |
|
| |||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||| || |
|
|
| T |
48095650 |
attcaacaatcttccatagcgaaggggaccgcctagtcgatcgaatgttttgcttatctttctcaggagctcctttg-gtggtgaccttatttggcggtg |
48095552 |
T |
|
| Q |
279 |
gacgcatagaggtggtctctagtaaaacaaattgccggaattgttccttcaaatgcaacttcatgttgtaatcggcatccttgaactgagcctgcaatat |
378 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |
|
|
| T |
48095551 |
gacgcatagaggtggtctctggtaaaacaaattgcccgaattgttccttcaaatgcaacttcatgttgtaatcggcgtccttgaaccgagcctgc----- |
48095457 |
T |
|
| Q |
379 |
tttaagaaaactgtcattctggtctgtgc |
407 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
48095456 |
---aagaaaactgtcattctggtctgtgc |
48095431 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 79 - 399
Target Start/End: Original strand, 52970038 - 52970357
Alignment:
| Q |
79 |
gttggcttaggaggagtaggtgacatgttgcttttccgtgcactcttcctactcgtccctgttgatattgtctatgagccctatgtctcttgctcctggg |
178 |
Q |
| |
|
|||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||| || | |||||||| ||| |||| |
|
|
| T |
52970038 |
gttgacttagtaggagtaggtgacatgttgcttttctgtgcactcttcctactcgtccctgttgatcttgtctgtgaaccatgtgtctctttctcatggg |
52970137 |
T |
|
| Q |
179 |
agtcaacaatctcccatagcgaaggggaccgccttgtcgatcgaatgctttgcttatctttcttaggagctcctttgtttggtgaccttatttggcgatg |
278 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||| || |
|
|
| T |
52970138 |
agtcaacaatctcccatagcgaaggggaccgccttgtcgatcgaatgttttgcttatctttcttaggagctcatttg-gtggtgaccttatttggcggtg |
52970236 |
T |
|
| Q |
279 |
gacgcatagaggtggtctctagtaaaacaaattgccggaattgttccttcaaatgcaacttcatgttgtaatcggcatccttgaactgagcctgcaatat |
378 |
Q |
| |
|
|||||||| ||||||| ||| ||||||||||||| || ||||||||||| |||||||||||||||||||||||| | | ||||||||||||||||||||| |
|
|
| T |
52970237 |
gacgcataaaggtggtgtctggtaaaacaaattgtcgaaattgttcctttaaatgcaacttcatgttgtaatcgacgttcttgaactgagcctgcaatat |
52970336 |
T |
|
| Q |
379 |
tttaagaaaactgtcattctg |
399 |
Q |
| |
|
| ||||||||||||||||||| |
|
|
| T |
52970337 |
tgtaagaaaactgtcattctg |
52970357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 79 - 407
Target Start/End: Original strand, 6160065 - 6160391
Alignment:
| Q |
79 |
gttggcttaggaggagtaggtgacatgttgcttttccgtgcactcttcctactcgtccctgttgatattgtctatgagccctatgtctcttgctcctggg |
178 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| |||||| ||| |||| ||||||||||||||| | |
|
|
| T |
6160065 |
gttggcttaggaggagtaggagacatgttgcttttccgtgcactctttctactcgtccctgttgattttgtctgtgaaccctgtgtctcttgctcctgtg |
6160164 |
T |
|
| Q |
179 |
agtcaacaatctcccatagcgaaggggaccgccttgtcgatcgaatgctttgcttatctttcttaggagctcctttgtttggtgaccttatttggcgatg |
278 |
Q |
| |
|
||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||| |||||||||||| |||| ||||||||||||| || |
|
|
| T |
6160165 |
agtcaacaatctcccatagggaaggggatcgccttgtcgatagaatgctttgcttatctttctttggagctcctttg-gtggttaccttatttggcggtg |
6160263 |
T |
|
| Q |
279 |
gacgcatagaggtggtctctagtaaaacaaattgccggaattgttccttcaaatgcaacttcatgttgtaatcggcatccttgaactgagcctgcaatat |
378 |
Q |
| |
|
||||||||||| |||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||| |||| ||||||||||| |
|
|
| T |
6160264 |
gacgcatagagatggtctgcggtaaaacaaattgtcggaatagttccttcaaatgcaacttcatgttgtaatcggcgtcctggaaccgagcctgcaat-g |
6160362 |
T |
|
| Q |
379 |
tttaagaaaactgtcattctggtctgtgc |
407 |
Q |
| |
|
| |||||||||||||||| |||| ||||| |
|
|
| T |
6160363 |
tgtaagaaaactgtcattttggtgtgtgc |
6160391 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 52969936 - 52970021
Alignment:
| Q |
1 |
acatatgtaaccttttcaataaatttatgcatccaaattgggatttggtctttgtgtggtatgttgactttaaccggtgttggctt |
86 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
52969936 |
acatctgtaaccttttcaataaatttatgcatccaaattgggatttggtctttgtgtggtatgttgactttaaccggtgttagctt |
52970021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 48095852 - 48095767
Alignment:
| Q |
1 |
acatatgtaaccttttcaataaatttatgcatccaaattgggatttggtctttgtgtggtatgttgactttaaccggtgttggctt |
86 |
Q |
| |
|
|||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||| |
|
|
| T |
48095852 |
acatctgtaaccttttcaataaacttatgcatccaaattaggatttggtctttgtgtgatatattgactttaaccggtgttggctt |
48095767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 26755860 - 26755945
Alignment:
| Q |
1 |
acatatgtaaccttttcaataaatttatgcatccaaattgggatttggtctttgtgtggtatgttgactttaaccggtgttggctt |
86 |
Q |
| |
|
|||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |
|
|
| T |
26755860 |
acatctgtaaccttttcaataaagtattgcatccaaattgggatttggtctttgtgtggtatgtggactttaacgggtgttggctt |
26755945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 6159989 - 6160046
Alignment:
| Q |
27 |
atgcatccaaattgggatttggtctttgtgtggtatgttgactttaaccggtgttggc |
84 |
Q |
| |
|
||||||| ||||||||||||| |||||||||||||||| ||||||||| ||||||||| |
|
|
| T |
6159989 |
atgcatcaaaattgggatttgatctttgtgtggtatgtcgactttaacgggtgttggc |
6160046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 146 - 394
Target Start/End: Original strand, 25478287 - 25478533
Alignment:
| Q |
146 |
ttgtctatgagccctatgtctcttgctcctgggagtcaacaatctcccatagcgaaggggaccgccttgtcgatcgaatgctttgcttatctttcttagg |
245 |
Q |
| |
|
|||||||||| ||| ||| | ||| |||||||| |||||||||||||| |||||||| || || ||||||| |||||| || |||| |||||| || |
|
|
| T |
25478287 |
ttgtctatgaagcctgtgtttgttgttcctgggattcaacaatctcccagagcgaaggcgattgctttgtcgaccgaatgaaatgtttatttttctttgg |
25478386 |
T |
|
| Q |
246 |
agctcctttgtttggtgaccttatttggcgatggacgcatagaggtggtctctagtaaaacaaattgccggaattgttccttcaaatgcaacttcatgtt |
345 |
Q |
| |
|
||||| ||| ||||||||| |||| || ||||||||||||||| || ||| | |||||||| || | ||||||||| || | | | || |||||||| |
|
|
| T |
25478387 |
agctcttttagg-ggtgaccttttttgacggtggacgcatagaggtagtttctggcaaaacaaactgtc-gaattgttctttgatacgtaagttcatgtt |
25478484 |
T |
|
| Q |
346 |
gtaatcggcatccttgaactgagcctgcaatattttaagaaaactgtca |
394 |
Q |
| |
|
|||||| | | ||||||| | |||| |||| |||||| ||| |||||| |
|
|
| T |
25478485 |
gtaatcaacgttcttgaacggggcctacaatgttttaaaaaatctgtca |
25478533 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 75
Target Start/End: Original strand, 25478186 - 25478251
Alignment:
| Q |
10 |
accttttcaataaatttatgcatccaaattgggatttggtctttgtgtggtatgttgactttaacc |
75 |
Q |
| |
|
|||||||||||||||| |||||| ||| |||||||| |||||||||||||||| |||||||||| |
|
|
| T |
25478186 |
accttttcaataaattcatgcatgcaatgcgggatttgttctttgtgtggtatgtggactttaacc |
25478251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0008 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0008
Description:
Target: scaffold0008; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 57 - 376
Target Start/End: Original strand, 260275 - 260595
Alignment:
| Q |
57 |
tggtatgttgactttaaccggtgttggcttaggaggagtaggtgacatgttgcttttccgtgcactcttcctactcgtccctgttgatattgtctatgag |
156 |
Q |
| |
|
||||||||||||||| || || |||| ||||||||| |||| |||||||| |||||||||||||| || ||||| ||| |||||| |||||||||| |
|
|
| T |
260275 |
tggtatgttgactttgactggaattggattaggaggattaggagacatgttacttttccgtgcactttttctacttttccatgttgaatttgtctatgaa |
260374 |
T |
|
| Q |
157 |
ccctatgtctcttgctcctgggagtcaacaatctcccatagcgaaggggaccgccttgtcgatcgaatgcttt--gcttatctttcttaggagctccttt |
254 |
Q |
| |
|
| | ||||| | | ||| || |||| ||| |||||| ||||||| || || |||| || | || | | | | ||||||||||| |||| ||||| |
|
|
| T |
260375 |
gcttgtgtctgtggatcccggaagtctacatgctcccaaagcgaagatgattgctttgttgaccaaaagatatatgtttatctttctttcgagccccttt |
260474 |
T |
|
| Q |
255 |
gtttggtgaccttatttggcgatggacgcatagaggtggtctctagtaaaacaaattgccggaattgttccttcaaatgcaacttcatgttgtaatcggc |
354 |
Q |
| |
|
| |||||||||| ||||||| ||| ||||||||| | ||| | | |||||||||| | ||||||| |||| ||| | ||||||||||||||| || |
|
|
| T |
260475 |
-tgtggtgaccttttttggcggtggccgcatagagtttgtcaatggcaaaacaaattattgaaattgttttttcatatgaaccttcatgttgtaatcagc |
260573 |
T |
|
| Q |
355 |
atccttgaactgagcctgcaat |
376 |
Q |
| |
|
||||||||| |||||| |||| |
|
|
| T |
260574 |
ctccttgaaccgagcctacaat |
260595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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