View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11351_low_4 (Length: 293)
Name: NF11351_low_4
Description: NF11351
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11351_low_4 |
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Alignment Details
Target: chr5 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 18 - 275
Target Start/End: Original strand, 35352816 - 35353075
Alignment:
| Q |
18 |
ccaaagtcgctttgcaaggtgtatagtacataaggaagtgcatggtcctacaagtgaataaaacgagaagaaaaatatttagaagggaaaactttgttaa |
117 |
Q |
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| T |
35352816 |
ccaaagtcgctttgcaaggtgtatagtacataaggaagtgcatggtcctacaagtgaataaaacgagaagaaaaatatttagaagggaaaactttgttaa |
35352915 |
T |
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| Q |
118 |
gggaatgcagtaatagcaattttgta--atatatagtaaacttttctgacgaaaggaagattggaaattttaattgagggtggaattgttacgaaaaccg |
215 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35352916 |
gggaatgcagtaatagcaattttgtataatatatagtaaacttttctgacgaaaggaagattggaaattttaattgagggtggaattgttacgaaaaccg |
35353015 |
T |
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| Q |
216 |
atttgaaatttctaacataaattcaagcgagtgattccaatgcataataaattgctatgc |
275 |
Q |
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| T |
35353016 |
atttgaaatttctaacataaattcaagcgagtgattccaatgcataataaattgctatgc |
35353075 |
T |
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