View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11353_low_12 (Length: 363)
Name: NF11353_low_12
Description: NF11353
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11353_low_12 |
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Alignment Details
Target: chr8 (Bit Score: 324; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 21 - 352
Target Start/End: Original strand, 44372828 - 44373159
Alignment:
| Q |
21 |
ctgcacccacaaatcatgagcaataattgaatgaaaattaattcatttatttgatattctcatttctcgccatcagtcgtaacaaatattacttgatgca |
120 |
Q |
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| T |
44372828 |
ctgcacccacaaatcatgagcaataattgaatgaaaattaattcatttatttgatattctcatttctcgccatcagtcgtaacaaatattacttgatgca |
44372927 |
T |
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| Q |
121 |
acacatgttatttatgggtatgctttcggtcaccccttatgctgctaattatcaagttgtgaatatcatcatcatatgaattttgtagcactaacatatt |
220 |
Q |
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| T |
44372928 |
acacatgttatttatgggtatgctttcagtcaccccttatgctgctaattatcaagttgtgaatatcatcatcatatgaattttgtagcactaacatatt |
44373027 |
T |
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| Q |
221 |
atttaaagttatacttcaaataacattacttgaatgcaataattgcttaagagctgaccctcacttgatttaaaatattcatgtatttgtgaaattttgt |
320 |
Q |
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| T |
44373028 |
atttaaagttatacttcaaataacattacttgaatgcaataactgcttaagagctgaccctcacttgatttaaaatattcatgtatttgtgaaattttgt |
44373127 |
T |
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| Q |
321 |
ctgttattcttgcaacttctatgttccttctt |
352 |
Q |
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| T |
44373128 |
ctgttattcttgcaacttctatgttccttctt |
44373159 |
T |
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