View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11356_low_11 (Length: 505)
Name: NF11356_low_11
Description: NF11356
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11356_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 484; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 484; E-Value: 0
Query Start/End: Original strand, 1 - 488
Target Start/End: Complemental strand, 47619808 - 47619321
Alignment:
| Q |
1 |
tgggaaagaaggcgtcgacaaactcaacgtaggaggaatagcatgcacgattgcaacgacgaagatctaaatgagcttagaggatgtattgaattaggat |
100 |
Q |
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| T |
47619808 |
tgggaaagaaggcgtcgacaaactcaacgtaggaggaatagcatgcacgattgcaacgacgaagatctaaatgagcttagaggatgtattgaattaggat |
47619709 |
T |
|
| Q |
101 |
ttggatttaatgaggaagatggacaaaagctttgcaatacattaccggctcttgatctatattttgccgttaaccggaacctgtctccaagtccggtatc |
200 |
Q |
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| T |
47619708 |
ttggatttaatgaggaagatggacaaaagctttgcaatacattaccggctcttgatctatattttgccgttaaccggaacctgtctccaagtccggtatc |
47619609 |
T |
|
| Q |
201 |
tacacctacaactcatcgcactactcacagccgttcatcttcatctattgcgagtcctactggtagcattgttgattctgattcttggaagatttgtaac |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47619608 |
tacacctacaactcatcgcactactcacagccgttcatcttcatctattgcgagtcctactggtagcattgttgattctgattcttggaagatttgtaac |
47619509 |
T |
|
| Q |
301 |
ccaggtaattaatgtcactcattcattattgataacccaattgttctaaattgacatggttacgttgaaaactttaatattgtagcaatagcaatgcaaa |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47619508 |
ccaggtaattaatgtcactcattcattattgataacccaattgttctaaattgacatggttacgttgaaaactttaatattgtagcaatagcaatgcaaa |
47619409 |
T |
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| Q |
401 |
caaatgcagccaatgcggctgcaattgtgattgcgatcatgtttttgagacttctaatatatttatactagaattgtagaccaactta |
488 |
Q |
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| T |
47619408 |
caaatgcagccaatgaggctgcaattgtgattgcgatcatgtttttgagacttctaatatatttatactagaattgtagaccaactta |
47619321 |
T |
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