View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11356_low_15 (Length: 470)
Name: NF11356_low_15
Description: NF11356
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11356_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 436; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 436; E-Value: 0
Query Start/End: Original strand, 19 - 466
Target Start/End: Complemental strand, 36448391 - 36447944
Alignment:
| Q |
19 |
gatacagcatataagataagagcatgtacatgtcctgtttgttcaaaactgcaaccgtattcattcacttgcatctattgcaaattaaggtaaggagaat |
118 |
Q |
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| T |
36448391 |
gatacagcatataagataagagcatgtacatgtcctgtttgttcaaaactgcaaccgtattcattcacttgcatctattgcaaattaaggtaaggagaat |
36448292 |
T |
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| Q |
119 |
atggttcggataaattttgatgatgaacaaaatggacggttaagatgtaaccttttttatttgtttgtcttttaatatggtccaagaggatacagataga |
218 |
Q |
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| T |
36448291 |
atggttcggataaattttgttgatgaacaaaatggacggttaagatgtaaccttttttatttgtttgtcttttaatatggtccaagaggatacagataga |
36448192 |
T |
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| Q |
219 |
aaaattgggaactaagaaccatttaaaaaagcataaatctctcaatctgtctcaacaattgaaagtgatttttctcactttgatttggtggtgggaacaa |
318 |
Q |
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| T |
36448191 |
aaaattgggaactaagaaccatttaaaaaagcataaatctcacaatctgtctcaacaattgaaagtgatttttctcactttgatttggtggtgggaacaa |
36448092 |
T |
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| Q |
319 |
ggtggtgaaatagactcttatcttaattaacacctcattcttgttggattgtgacttggaaaattaggccggctatcatggttccttatcattaggacca |
418 |
Q |
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| T |
36448091 |
ggtggtgaaatagactcttatcttaattaacacctcattcttgttggattgtgacttggaaaattaggccggctatcatggttccttatcattaggacca |
36447992 |
T |
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| Q |
419 |
aatgggacctctttcatttcttagcggacacttgtcttcatctcactc |
466 |
Q |
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| T |
36447991 |
aatgggacctctttcatttcttagcggacacttgtcttaatctcactc |
36447944 |
T |
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