View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11356_low_28 (Length: 331)

Name: NF11356_low_28
Description: NF11356
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11356_low_28
NF11356_low_28
[»] chr1 (1 HSPs)
chr1 (19-313)||(10755525-10755819)
[»] chr8 (12 HSPs)
chr8 (33-313)||(2980183-2980463)
chr8 (50-313)||(2711182-2711445)
chr8 (19-313)||(3170135-3170429)
chr8 (33-313)||(2989291-2989571)
chr8 (19-313)||(9850965-9851259)
chr8 (19-309)||(3002280-3002570)
chr8 (36-298)||(3142048-3142310)
chr8 (42-313)||(2916019-2916290)
chr8 (19-204)||(3173700-3173885)
chr8 (38-205)||(2911057-2911224)
chr8 (21-295)||(3282371-3282639)
chr8 (37-295)||(13791255-13791507)
[»] chr6 (1 HSPs)
chr6 (33-313)||(18355691-18355971)
[»] chr7 (1 HSPs)
chr7 (19-313)||(3919017-3919311)
[»] scaffold0065 (2 HSPs)
scaffold0065 (37-313)||(45410-45686)
scaffold0065 (33-305)||(50588-50859)


Alignment Details
Target: chr1 (Bit Score: 295; Significance: 1e-166; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 19 - 313
Target Start/End: Original strand, 10755525 - 10755819
Alignment:
Q  19 catcaattttgttcttggttaatgactccaacatgttcttcagaatagttttgacgtcaaagttatcagagacacatacccacatactcttctcaaacaa 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10755525 catcaattttgttcttggttaatgactccaacatgttcttcagaatagttttgacgtcaaagttatcagagacacatacccacatactcttctcaaacaa 10755624  T
Q  119 atcttgcacttctctatcgttgtataccaattgagcaagagccgtcttccctaaaccaccaataccaacaatagcaaccaaggagacattctgattttca 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10755625 atcttgcacttctctatcgttgtataccaattgagcaagagccgtcttccctaaaccaccaataccaacaatagcaaccaaggagacattctgattttca 10755724  T
Q  219 tgtgattgcatcaacaaacttataattttctttttatcatattctcttccaatgatatttgattctaacacaaaagaactagtttccctccttac 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10755725 tgtgattgcatcaacaaacttataattttctttttatcatattctcttccaatgatatttgattctaacacaaaagaactagtttccctccttac 10755819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 185; Significance: 1e-100; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 33 - 313
Target Start/End: Complemental strand, 2980463 - 2980183
Alignment:
Q  33 ttggttaatgactccaacatgttcttcagaatagttttgacgtcaaagttatcagagacacatacccacatactcttctcaaacaaatcttgcacttctc 132  Q
    ||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||  |||||||||     
T  2980463 ttggttaatgactccattatgttcttcagaatagttttgacatcaaagttatcagagacacatacccacattctcttttcaaacaaattctgcacttctt 2980364  T
Q  133 tatcgttgtataccaattgagcaagagccgtcttccctaaaccaccaataccaacaatagcaaccaaggagacattctgattttcatgtgattgcatcaa 232  Q
     ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||  || || |  |||||||||||||||||| ||||    
T  2980363 catcgttgtataccaattgagcaagagccgtctttcccaaaccaccaataccaacaatagcaaccacagaaacttgttgattttcatgtgattgcctcaa 2980264  T
Q  233 caaacttataattttctttttatcatattctcttccaatgatatttgattctaacacaaaagaactagtttccctccttac 313  Q
    ||| |||||||| || |||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  2980263 caagcttataatcttgtttttatcatcttctcttccaatgatatttgattctaacacataagaacaagtttccctccttac 2980183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 50 - 313
Target Start/End: Original strand, 2711182 - 2711445
Alignment:
Q  50 catgttcttcagaatagttttgacgtcaaagttatcagagacacatacccacatactcttctcaaacaaatcttgcacttctctatcgttgtataccaat 149  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||    ||| ||||||||||||    
T  2711182 catgttcttcagaatagttttgacatcaaagttatccgagacacatacccacatactcttttcaaacaaattttgcacttgatcatcattgtataccaat 2711281  T
Q  150 tgagcaagagccgtcttccctaaaccaccaataccaacaatagcaaccaaggagacattctgattttcatgtgattgcatcaacaaacttataattttct 249  Q
    ||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||    
T  2711282 tgagcaagagctgtctttcccaaaccaccaataccaacaatagcaaccaaggagacattctgattttcatgtgattgcctcaacaagcttataatcttct 2711381  T
Q  250 ttttatcatattctcttccaatgatatttgattctaacacaaaagaactagtttccctccttac 313  Q
    ||||||||| |||||||||||| || | |||||||||||||||||||||| |||||||||||||    
T  2711382 ttttatcatcttctcttccaataatctctgattctaacacaaaagaactactttccctccttac 2711445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 19 - 313
Target Start/End: Original strand, 3170135 - 3170429
Alignment:
Q  19 catcaattttgttcttggttaatgactccaacatgttcttcagaatagttttgacgtcaaagttatcagagacacatacccacatactcttctcaaacaa 118  Q
    |||||||||| || |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||  |    
T  3170135 catcaattttcttattggttaatgactccaacattttcttcagaatagttttgacatcaaagttatcagagacacatacccacatcctcttttcaaaaga 3170234  T
Q  119 atcttgcacttctctatcgttgtataccaattgagcaagagccgtcttccctaaaccaccaataccaacaatagcaaccaaggagacattctgattttca 218  Q
     | |   ||||    ||| ||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3170235 ctttgttacttgagcatcattgtataccaattgagcaagagctgtctttcccaaaccaccaataccaacaatagcaaccaaggagacattctgattttca 3170334  T
Q  219 tgtgattgcatcaacaaacttataattttctttttatcatattctcttccaatgatatttgattctaacacaaaagaactagtttccctccttac 313  Q
    ||||||||| ||||||| ||||| || ||||||||||||| ||||||||||||||| | ||||||||||||||||||||| ||||||||||||||    
T  3170335 tgtgattgcctcaacaagcttatgatcttctttttatcatcttctcttccaatgatctctgattctaacacaaaagaacttgtttccctccttac 3170429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 33 - 313
Target Start/End: Complemental strand, 2989571 - 2989291
Alignment:
Q  33 ttggttaatgactccaacatgttcttcagaatagttttgacgtcaaagttatcagagacacatacccacatactcttctcaaacaaatcttgcacttctc 132  Q
    |||||||||||| | | |||||||||||||||||||||||  ||||||||||| ||||||||||||||||||  ||| |||||||||| || |||||| |    
T  2989571 ttggttaatgacgcaaccatgttcttcagaatagttttgaaatcaaagttatccgagacacatacccacatatgcttttcaaacaaatttttcacttcac 2989472  T
Q  133 tatcgttgtataccaattgagcaagagccgtcttccctaaaccaccaataccaacaatagcaaccaaggagacattctgattttcatgtgattgcatcaa 232  Q
     ||| |||||||||| |||||||||||| ||||| || ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||    
T  2989471 catctttgtataccagttgagcaagagctgtctttcccaaaccaccaataccaacaatagcaaccaatgagacattctgatgttcatgtgattgcctcaa 2989372  T
Q  233 caaacttataattttctttttatcatattctcttccaatgatatttgattctaacacaaaagaactagtttccctccttac 313  Q
    ||| ||||||||  | |||| ||| | ||||||||||||||| |  |||||||||||| |||| | |||||||||||||||    
T  2989371 caagcttataatcgtgttttgatcttcttctcttccaatgatctcagattctaacacataagagcaagtttccctccttac 2989291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 19 - 313
Target Start/End: Original strand, 9850965 - 9851259
Alignment:
Q  19 catcaattttgttcttggttaatgactccaacatgttcttcagaatagttttgacgtcaaagttatcagagacacatacccacatactcttctcaaacaa 118  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||| ||||| ||||||||    
T  9850965 catcaattttgttcttggttaatgactccaacatgttcttcacaatagttttgacttcaaagttttcagagacacatacccacatcctcttttcaaacaa 9851064  T
Q  119 atcttgcacttctctatcgttgtataccaattgagcaagagccgtcttccctaaaccaccaataccaacaatagcaaccaaggagacattctgattttca 218  Q
    || || ||||||  | ||    || | || |||||||||||  ||||| || ||||||||||  ||||||| ||||| ||| |||||||| |||||||||    
T  9851065 atttttcacttccatgtcacaataaatcatttgagcaagagttgtctttcccaaaccaccaaatccaacaacagcaatcaaagagacattttgattttca 9851164  T
Q  219 tgtgattgcatcaacaaacttataattttctttttatcatattctcttccaatgatatttgattctaacacaaaagaactagtttccctccttac 313  Q
    |||| |||  ||||||| |||||||| ||| ||||||||| |||||||||||||||||  ||||| ||||||||||||||||| || ||||||||    
T  9851165 tgtggttgtctcaacaagcttataatcttcattttatcatcttctcttccaatgatatccgattccaacacaaaagaactagtctctctccttac 9851259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 19 - 309
Target Start/End: Complemental strand, 3002570 - 3002280
Alignment:
Q  19 catcaattttgttcttggttaatgactccaacatgttcttcagaatagttttgacgtcaaagttatcagagacacatacccacatactcttctcaaacaa 118  Q
    ||||||||||| | ||||||||||| || | ||||||||||| ||||||||| || |||||||| |||||||||||||||||||||||  | ||||||||    
T  3002570 catcaattttgctattggttaatgattcaaccatgttcttcacaatagtttttacatcaaagttttcagagacacatacccacatacttatttcaaacaa 3002471  T
Q  119 atcttgcacttctctatcgttgtataccaattgagcaagagccgtcttccctaaaccaccaataccaacaatagcaaccaaggagacattctgattttca 218  Q
    || ||||||||||| ||| || |||||||| ||||||||||  ||||| |||||||||||||| ||||||||||||| |||||||||||| || ||| ||    
T  3002470 attttgcacttctccatcattatataccaactgagcaagagttgtctttcctaaaccaccaatcccaacaatagcaatcaaggagacattttggtttcca 3002371  T
Q  219 tgtgattgcatcaacaaacttataattttctttttatcatattctcttccaatgatatttgattctaacacaaaagaactagtttccctcc 309  Q
    |||| |||  |||| |    |||||| | ||||||||| | |||||||||||||||||  ||||||||||| |||||||||||||||||||    
T  3002370 tgtggttgtctcaaaaggtgtataatctcctttttatcgtcttctcttccaatgatatccgattctaacaccaaagaactagtttccctcc 3002280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 36 - 298
Target Start/End: Original strand, 3142048 - 3142310
Alignment:
Q  36 gttaatgactccaacatgttcttcagaatagttttgacgtcaaagttatcagagacacatacccacatactcttctcaaacaaatcttgcacttctctat 135  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||| ||| |||||  ||| |   ||||| | ||    
T  3142048 gttaatgactccaacatgttcttcacaatagttttgacatcaaagttatcagagacacaaacccacatacacttttcaaaataatttgttacttcaccat 3142147  T
Q  136 cgttgtataccaattgagcaagagccgtcttccctaaaccaccaataccaacaatagcaaccaaggagacattctgattttcatgtgattgcatcaacaa 235  Q
    | |||||||||||||||| |||||| ||||| || ||||||||||| ||||||||||||||||  ||||||   |||||||||||||||||| ||||||     
T  3142148 cattgtataccaattgagaaagagctgtctttcccaaaccaccaatcccaacaatagcaaccacagagacacgttgattttcatgtgattgcctcaacat 3142247  T
Q  236 acttataattttctttttatcatattctcttccaatgatatttgattctaacacaaaagaact 298  Q
     |||| ||| |  ||||||||||  |||||||||||||||| ||| |||||||||||||||||    
T  3142248 gcttacaatgtcatttttatcatcatctcttccaatgatatctgactctaacacaaaagaact 3142310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 42 - 313
Target Start/End: Original strand, 2916019 - 2916290
Alignment:
Q  42 gactccaacatgttcttcagaatagttttgacgtcaaagttatcagagacacatacccacatactcttctcaaacaaatcttgcacttctctatcgttgt 141  Q
    |||||||| |||||||||| |||||||||||| |||||||  ||||| ||||||||||| ||  |||| ||||||   | ||||||||| | ||| || |    
T  2916019 gactccaatatgttcttcaaaatagttttgacatcaaagtcttcagacacacatacccatatcttcttttcaaactttttttgcacttccccatcattat 2916118  T
Q  142 ataccaattgagcaagagccgtcttccctaaaccaccaataccaacaatagcaaccaaggagacattctgattttcatgtgattgcatcaacaaacttat 241  Q
    |||||| |||||||||||| ||||| |||||||| |||||||||||||| |||| |||||||||||| || |||  ||||| |||| |||| ||| |||     
T  2916119 ataccagttgagcaagagctgtcttacctaaaccgccaataccaacaatggcaatcaaggagacattgtggtttctatgtggttgcctcaataaatttac 2916218  T
Q  242 aattttctttttatcatattctcttccaatgatatttgattctaacacaaaagaactagtttccctccttac 313  Q
    ||| |  ||||||| || |||||| |||||||||| ||||||||| |||||||| | |||||| ||||||||    
T  2916219 aatctcttttttattatcttctctaccaatgatatctgattctaatacaaaagagcaagtttctctccttac 2916290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 204
Target Start/End: Original strand, 3173700 - 3173885
Alignment:
Q  19 catcaattttgttcttggttaatgactccaacatgttcttcagaatagttttgacgtcaaagttatcagagacacatacccacatactcttctcaaacaa 118  Q
    ||||||||||| | ||||| ||||||||| | || ||| | | ||  |||||||| |||||||||||||||||||| ||||||||  || | || || |     
T  3173700 catcaattttgatattggtcaatgactccgaaattttcgtaacaactgttttgacatcaaagttatcagagacacaaacccacatcgtcatttcgaaaag 3173799  T
Q  119 atcttgcacttctctatcgttgtataccaattgagcaagagccgtcttccctaaaccaccaataccaacaatagcaaccaaggaga 204  Q
    || ||||||||||| ||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||| || ||||||| |||||    
T  3173800 attttgcacttctccatcattgtataccaattgagcaagagctgtcttccccaaaccaccaattccaactattgcaaccagggaga 3173885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 38 - 205
Target Start/End: Original strand, 2911057 - 2911224
Alignment:
Q  38 taatgactccaacatgttcttcagaatagttttgacgtcaaagttatcagagacacatacccacatactcttctcaaacaaatcttgcacttctctatcg 137  Q
    |||||||||||| || ||||||| |||||||||||| |||||||| | ||||||||| ||||| ||  |||| || || |  | ||  |||||  ||||     
T  2911057 taatgactccaatattttcttcaaaatagttttgacatcaaagtttttagagacacacacccatatcttcttttcgaaaatgttttctacttccttatca 2911156  T
Q  138 ttgtataccaattgagcaagagccgtcttccctaaaccaccaataccaacaatagcaaccaaggagac 205  Q
    ||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||| | |||||||||    
T  2911157 ttgtataccaactgagcaagagctgtcttgcctaaaccaccaataccaacaatagctatcaaggagac 2911224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 21 - 295
Target Start/End: Original strand, 3282371 - 3282639
Alignment:
Q  21 tcaattttgttcttggttaatgactccaacatgttcttcagaatagttttgacgtcaaagttatcagagacacatacccacatactcttctcaaacaaat 120  Q
    ||||||||| | | |||||||||||||||||| ||||||| ||| || ||||| |||||||||| ||| | ||||||||||||  |||| |||||   ||    
T  3282371 tcaattttgctgtcggttaatgactccaacattttcttcacaatggtcttgacatcaaagttattagatatacatacccacattttcttttcaaaatgat 3282470  T
Q  121 cttgcacttctctatcgttgtataccaattgagcaagagccgtcttccctaaaccaccaataccaacaatagcaaccaaggagacattctgattttcatg 220  Q
     |||||||||   ||| || || |  || ||||||||||  ||||| |||| ||| |||||||| ||||||||||   | ||||       |||| || |    
T  3282471 tttgcacttcctcatcattataaatgaactgagcaagagttgtcttgcctatacctccaatacctacaatagcaattgatgaga------tatttccacg 3282564  T
Q  221 tgattgcatcaacaaacttataattttctttttatcatattctcttccaatgatatttgattctaacacaaaaga 295  Q
    || |||| |||| | | ||||||| | ||||||||||| |||||||||| |||||||||||||||||| ||||||    
T  3282565 tggttgcctcaagagatttataatctcctttttatcatcttctcttccattgatatttgattctaacaaaaaaga 3282639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 295
Target Start/End: Complemental strand, 13791507 - 13791255
Alignment:
Q  37 ttaatgactccaacatgttcttcagaatagttttgacgtcaaagttatcagagacacatacccacatactcttctcaaacaaatcttgcacttctctatc 136  Q
    |||||||||||||||| ||||||| ||| || ||||| |||||||||  ||| ||||||||||||||  |||| |||||    | |||||||||   |||    
T  13791507 ttaatgactccaacattttcttcacaatggtcttgacatcaaagttactagatacacatacccacattttcttttcaaaatgcttttgcacttccacatc 13791408  T
Q  137 gttgtataccaattgagcaagagccgtcttccctaaaccaccaataccaacaatagcaaccaaggagacattctgattttcatgtgattgcatcaacaaa 236  Q
     || ||||| ||| |||||||||  ||||| || | ||| |||||||| |||||| |||   | ||||       |||| |||||| |||  |||| | |    
T  13791407 attatatacgaatcgagcaagagttgtcttgccaatacctccaatacctacaataacaattgacgaga------tatttccatgtggttgtgtcaagaga 13791314  T
Q  237 cttataattttctttttatcatattctcttccaatgatatttgattctaacacaaaaga 295  Q
     ||||||| | ||||||||||| ||||||||| ||||| ||||||||||||| ||||||    
T  13791313 tttataatctcctttttatcatcttctcttcccatgatgtttgattctaacaaaaaaga 13791255  T

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Target: chr6 (Bit Score: 149; Significance: 1e-78; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 33 - 313
Target Start/End: Complemental strand, 18355971 - 18355691
Alignment:
Q  33 ttggttaatgactccaacatgttcttcagaatagttttgacgtcaaagttatcagagacacatacccacatactcttctcaaacaaatcttgcacttctc 132  Q
    ||||||||| || | | |||||||||||||||||||||||  ||||||||||| ||||||||||||||||||  ||| |||||||||| || |||||| |    
T  18355971 ttggttaataacgcaaccatgttcttcagaatagttttgaaatcaaagttatctgagacacatacccacatatgcttttcaaacaaatttttcacttcac 18355872  T
Q  133 tatcgttgtataccaattgagcaagagccgtcttccctaaaccaccaataccaacaatagcaaccaaggagacattctgattttcatgtgattgcatcaa 232  Q
     ||| |||||||||| |||||||||||| ||||| || ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||    
T  18355871 catctttgtataccagttgagcaagagctgtctttcccaaaccaccaataccaacaatagcaaccaatgagacattctgatgttcatgtgattgcctcaa 18355772  T
Q  233 caaacttataattttctttttatcatattctcttccaatgatatttgattctaacacaaaagaactagtttccctccttac 313  Q
    ||| |||||||| || |||||||| | ||||||||||||||| |  |||||||||||| |||| | |||||||||||||||    
T  18355771 caagcttataatcttgtttttatcttcttctcttccaatgatctcagattctaacacataagagcaagtttccctccttac 18355691  T

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Target: chr7 (Bit Score: 147; Significance: 2e-77; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 19 - 313
Target Start/End: Original strand, 3919017 - 3919311
Alignment:
Q  19 catcaattttgttcttggttaatgactccaacatgttcttcagaatagttttgacgtcaaagttatcagagacacatacccacatactcttctcaaacaa 118  Q
    |||||||||||||||||||||||||||||||||| |||||||  ||||  ||||  ||||||||||| ||||||||||||||||||||| | |||||| |    
T  3919017 catcaattttgttcttggttaatgactccaacattttcttcattatagccttgagttcaaagttatcggagacacatacccacatactcctttcaaacga 3919116  T
Q  119 atcttgcacttctctatcgttgtataccaattgagcaagagccgtcttccctaaaccaccaataccaacaatagcaaccaaggagacattctgattttca 218  Q
     | |||||||||   ||| ||||||| ||||||||||||||  ||||| |||||||||||||| ||||||||| ||||||   ||||||| |||||| ||    
T  3919117 gttttgcacttccacatcattgtatatcaattgagcaagagttgtctttcctaaaccaccaatcccaacaataccaaccacaaagacattttgatttcca 3919216  T
Q  219 tgtgattgcatcaacaaacttataattttctttttatcatattctcttccaatgatatttgattctaacacaaaagaactagtttccctccttac 313  Q
    |||| |||||||||||| |||||||| ||||||||||||| |||||||||||||||||  ||||||||| |||| ||||| ||||||||||||||    
T  3919217 tgtggttgcatcaacaagcttataatcttctttttatcatcttctcttccaatgatatccgattctaacgcaaatgaacttgtttccctccttac 3919311  T

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Target: scaffold0065 (Bit Score: 145; Significance: 3e-76; HSPs: 2)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 37 - 313
Target Start/End: Complemental strand, 45686 - 45410
Alignment:
Q  37 ttaatgactccaacatgttcttcagaatagttttgacgtcaaagttatcagagacacatacccacatactcttctcaaacaaatcttgcacttctctatc 136  Q
    ||||||||| |||||||||||| |||||||||||||| |||||||||| |||||||||||||||||| ||||| |||||  | | |   ||||| | |||    
T  45686 ttaatgacttcaacatgttctttagaatagttttgacatcaaagttattagagacacatacccacatcctcttttcaaaagactttgttacttcaccatc 45587  T
Q  137 gttgtataccaattgagcaagagccgtcttccctaaaccaccaataccaacaatagcaaccaaggagacattctgattttcatgtgattgcatcaacaaa 236  Q
     ||||||||||||||||||||||| ||||| || ||||| ||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||     
T  45586 attgtataccaattgagcaagagctgtctttcccaaaccgccaatccctacaatagcaaccaaggagacattctgattttcatgtgattgcctcaacaag 45487  T
Q  237 cttataattttctttttatcatattctcttccaatgatatttgattctaacacaaaagaactagtttccctccttac 313  Q
    ||||| || || ||| |||||| ||||||||| ||||||| ||||||| ||||||||||||| ||||||||||||||    
T  45486 cttatgatcttatttctatcatcttctcttccgatgatatctgattctgacacaaaagaacttgtttccctccttac 45410  T

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Target: scaffold0065; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 33 - 305
Target Start/End: Complemental strand, 50859 - 50588
Alignment:
Q  33 ttggttaatgactccaacatgttcttcagaatagttttgacgtcaaagttatcagagacacatacccacatactcttctcaaacaaatcttgcacttctc 132  Q
    |||||||||| |||||| || ||||| | |||||||||||| || | ||||||||||||||| ||||||||||||||  ||||    | ||  ||||| |    
T  50859 ttggttaatggctccaatattttcttaacaatagttttgacatcca-gttatcagagacacacacccacatactctttccaaaactcttttttacttcac 50761  T
Q  133 tatcgttgtataccaattgagcaagagccgtcttccctaaaccaccaataccaacaatagcaaccaaggagacattctgattttcatgtgattgcatcaa 232  Q
      || ||||| || |||||||||||||  ||||| || ||||||||||| ||||||||||||||||  || |||| ||| |||||||||| || | ||||    
T  50760 cgtcattgtaaactaattgagcaagagttgtctttcccaaaccaccaatcccaacaatagcaaccacagaaacatgctggttttcatgtggttacctcaa 50661  T
Q  233 caaacttataattttctttttatcatattctcttccaatgatatttgattctaacacaaaagaactagtttcc 305  Q
    ||| |||| ||| |  |||| ||| | ||||||||| |||||||  ||||| ||||||||||||||| |||||    
T  50660 caagcttaaaatctcattttaatcgtcttctcttccgatgatatcagattcgaacacaaaagaactattttcc 50588  T

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