View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11357_low_1 (Length: 363)
Name: NF11357_low_1
Description: NF11357
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11357_low_1 |
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Alignment Details
Target: chr8 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 19 - 304
Target Start/End: Original strand, 13774946 - 13775235
Alignment:
| Q |
19 |
agaacaacaaccaataaagggtatcctcttaacaaaattaaaagatatacaagtcattttattagatcaaaactatgataaaaagttaatgtaatcctca |
118 |
Q |
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| T |
13774946 |
agaacaacaaccaataaagggtatcctcttaacaaaattaaaagatatacaagtcattttattggatcaaaactatgataaaaagttaatgtaatcctca |
13775045 |
T |
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| Q |
119 |
taaaatgcatgaaattaaaaggaatcaacattagaa----catcatacaactatggaaaccgtgtctcaaaaagtgccttagctatacaaattacaatgg |
214 |
Q |
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| T |
13775046 |
taaaatgcatgaaattaaaaggaatcaacattagaattaacatcatacaactatggaaaccgtgtctcaaaaagtgccttagctatacaaattacaatgg |
13775145 |
T |
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| Q |
215 |
tcgtaattcattaactcgtacttaatattatttcttatgatcttctctttttgatttgatcatacactgcttcacaagttgtttcaaacc |
304 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13775146 |
tcgtaattcattaactcgtacttaatattatttcttatgatcttctctttttgatttgatcatacactgcttcacaagttgtttcaaacc |
13775235 |
T |
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