View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11360_low_1 (Length: 280)

Name: NF11360_low_1
Description: NF11360
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11360_low_1
NF11360_low_1
[»] chr4 (91 HSPs)
chr4 (1-264)||(6133177-6133437)
chr4 (1-151)||(2891632-2891780)
chr4 (1-151)||(36921338-36921486)
chr4 (1-151)||(40091259-40091408)
chr4 (1-151)||(14787274-14787424)
chr4 (1-151)||(14789273-14789423)
chr4 (1-151)||(22802577-22802727)
chr4 (1-145)||(36919435-36919577)
chr4 (1-151)||(38928024-38928170)
chr4 (1-151)||(47563101-47563248)
chr4 (1-151)||(24446502-24446647)
chr4 (1-151)||(16453650-16453796)
chr4 (19-153)||(27499406-27499538)
chr4 (1-153)||(22800703-22800855)
chr4 (21-151)||(49088916-49089044)
chr4 (1-144)||(52942336-52942481)
chr4 (1-152)||(24879330-24879472)
chr4 (1-126)||(12395713-12395838)
chr4 (1-126)||(12400675-12400800)
chr4 (1-151)||(24889136-24889286)
chr4 (1-131)||(33415352-33415481)
chr4 (18-151)||(5101273-5101404)
chr4 (1-126)||(13547494-13547620)
chr4 (1-126)||(40637414-40637542)
chr4 (1-151)||(36380690-36380834)
chr4 (21-152)||(16455586-16455715)
chr4 (26-152)||(37089211-37089333)
chr4 (1-151)||(4215646-4215792)
chr4 (27-126)||(48486687-48486786)
chr4 (1-132)||(17662108-17662238)
chr4 (1-151)||(36378633-36378777)
chr4 (21-133)||(37312940-37313052)
chr4 (31-152)||(3824446-3824569)
chr4 (25-151)||(22046526-22046648)
chr4 (26-131)||(14633690-14633792)
chr4 (31-154)||(31849437-31849554)
chr4 (2-151)||(38890072-38890217)
chr4 (26-151)||(51015617-51015738)
chr4 (26-152)||(2484714-2484834)
chr4 (26-152)||(6765216-6765336)
chr4 (1-152)||(24880792-24880936)
chr4 (16-151)||(18409192-18409324)
chr4 (26-153)||(22044229-22044352)
chr4 (26-152)||(5635317-5635437)
chr4 (26-126)||(9148607-9148704)
chr4 (26-151)||(11437734-11437855)
chr4 (28-131)||(47210655-47210755)
chr4 (29-151)||(53405508-53405626)
chr4 (28-133)||(11435328-11435431)
chr4 (31-151)||(11006094-11006209)
chr4 (31-151)||(11008408-11008523)
chr4 (21-122)||(47275084-47275185)
chr4 (26-151)||(24348573-24348692)
chr4 (31-151)||(5198781-5198895)
chr4 (31-151)||(8631260-8631374)
chr4 (26-151)||(16931631-16931751)
chr4 (26-151)||(38409576-38409696)
chr4 (31-132)||(9176331-9176429)
chr4 (26-151)||(18709003-18709124)
chr4 (26-151)||(47868773-47868894)
chr4 (2-151)||(5664576-5664722)
chr4 (21-126)||(18534705-18534807)
chr4 (2-111)||(28454024-28454130)
chr4 (28-154)||(7941697-7941817)
chr4 (26-133)||(18847524-18847628)
chr4 (21-151)||(56030820-56030945)
chr4 (31-151)||(9173987-9174101)
chr4 (21-111)||(18537362-18537449)
chr4 (36-126)||(22134480-22134567)
chr4 (21-152)||(31983382-31983507)
chr4 (26-151)||(44599680-44599799)
chr4 (1-151)||(3937126-3937267)
chr4 (21-151)||(8756103-8756226)
chr4 (29-151)||(12102450-12102566)
chr4 (29-151)||(19323061-19323177)
chr4 (2-149)||(25357984-25358122)
chr4 (22-126)||(41997851-41997952)
chr4 (19-133)||(10113226-10113335)
chr4 (36-126)||(22132252-22132340)
chr4 (26-126)||(26085840-26085938)
chr4 (26-133)||(22782593-22782698)
chr4 (1-113)||(30136890-30136998)
chr4 (61-132)||(15032410-15032480)
chr4 (2-151)||(16185686-16185827)
chr4 (49-126)||(38270017-38270091)
chr4 (21-151)||(9864070-9864196)
chr4 (26-151)||(16933988-16934105)
chr4 (95-151)||(18311215-18311270)
chr4 (2-64)||(22295506-22295565)
chr4 (28-126)||(40998892-40998986)
chr4 (1-64)||(47150826-47150886)
[»] chr2 (47 HSPs)
chr2 (1-152)||(19007902-19008052)
chr2 (1-154)||(17849379-17849531)
chr2 (1-151)||(28196897-28197045)
chr2 (1-151)||(22707595-22707744)
chr2 (1-126)||(3022434-3022559)
chr2 (1-126)||(22162892-22163015)
chr2 (1-152)||(14837530-14837680)
chr2 (1-126)||(42923374-42923502)
chr2 (1-124)||(6258687-6258810)
chr2 (1-126)||(15539398-15539522)
chr2 (1-151)||(6263993-6264141)
chr2 (1-151)||(22287181-22287329)
chr2 (1-100)||(22407348-22407447)
chr2 (1-153)||(28459036-28459183)
chr2 (1-126)||(21520557-21520686)
chr2 (29-132)||(38020370-38020473)
chr2 (1-151)||(43623423-43623573)
chr2 (1-120)||(7462819-7462940)
chr2 (18-126)||(34979457-34979565)
chr2 (5-132)||(23871082-23871211)
chr2 (1-121)||(5375218-5375339)
chr2 (26-145)||(27105091-27105206)
chr2 (26-151)||(13909884-13910006)
chr2 (26-131)||(45279860-45279962)
chr2 (1-77)||(44288984-44289060)
chr2 (26-152)||(24162062-24162184)
chr2 (27-151)||(36560981-36561101)
chr2 (21-151)||(31732631-31732754)
chr2 (21-151)||(11577957-11578082)
chr2 (20-151)||(38414028-38414156)
chr2 (31-151)||(20592368-20592484)
chr2 (1-111)||(17848702-17848811)
chr2 (26-132)||(23452094-23452198)
chr2 (26-133)||(35217826-35217930)
chr2 (27-151)||(36558721-36558841)
chr2 (38-151)||(11739421-11739532)
chr2 (33-151)||(19504178-19504291)
chr2 (55-151)||(42453798-42453890)
chr2 (1-151)||(45238842-45238990)
chr2 (31-151)||(19501843-19501958)
chr2 (61-151)||(22874431-22874519)
chr2 (21-133)||(17897114-17897221)
chr2 (26-111)||(42064792-42064875)
chr2 (26-151)||(45332020-45332141)
chr2 (1-77)||(40031969-40032046)
chr2 (26-133)||(35215449-35215553)
chr2 (21-64)||(20146540-20146582)
[»] chr5 (72 HSPs)
chr5 (4-151)||(41585580-41585725)
chr5 (9-150)||(12555757-12555898)
chr5 (1-133)||(31465849-31465982)
chr5 (1-135)||(2724179-2724313)
chr5 (4-151)||(26098129-26098278)
chr5 (1-147)||(17818338-17818485)
chr5 (1-151)||(10474168-10474316)
chr5 (5-151)||(37705626-37705771)
chr5 (1-126)||(1189475-1189600)
chr5 (1-152)||(658203-658349)
chr5 (1-126)||(6756778-6756904)
chr5 (21-124)||(20045292-20045395)
chr5 (19-133)||(40221833-40221947)
chr5 (1-151)||(18511056-18511205)
chr5 (1-126)||(20505710-20505836)
chr5 (21-151)||(36208879-36209007)
chr5 (1-111)||(26098017-26098127)
chr5 (1-151)||(36402170-36402321)
chr5 (21-145)||(21289065-21289187)
chr5 (1-126)||(6747590-6747720)
chr5 (1-125)||(16092069-16092192)
chr5 (1-126)||(2954702-2954826)
chr5 (1-120)||(25904389-25904508)
chr5 (29-151)||(34530559-34530679)
chr5 (1-110)||(18509201-18509311)
chr5 (27-151)||(17073199-17073321)
chr5 (1-126)||(2818200-2818328)
chr5 (26-151)||(4236946-4237065)
chr5 (1-151)||(24127142-24127291)
chr5 (26-151)||(18469327-18469448)
chr5 (1-122)||(20043276-20043397)
chr5 (19-126)||(21948336-21948445)
chr5 (26-152)||(38882406-38882526)
chr5 (1-126)||(6745354-6745484)
chr5 (26-151)||(18467002-18467123)
chr5 (26-151)||(2175219-2175341)
chr5 (27-133)||(16776473-16776578)
chr5 (26-135)||(25804342-25804448)
chr5 (1-152)||(39854769-39854922)
chr5 (21-150)||(6661038-6661161)
chr5 (26-151)||(10587133-10587252)
chr5 (21-133)||(18596951-18597063)
chr5 (26-151)||(10528937-10529059)
chr5 (26-151)||(27910751-27910872)
chr5 (26-151)||(39798348-39798468)
chr5 (1-151)||(696164-696310)
chr5 (26-149)||(27912854-27912973)
chr5 (25-152)||(38959971-38960093)
chr5 (26-152)||(21684293-21684413)
chr5 (26-126)||(25921337-25921434)
chr5 (26-151)||(34476894-34477014)
chr5 (26-151)||(3372977-3373098)
chr5 (33-151)||(31179213-31179326)
chr5 (1-152)||(20054123-20054267)
chr5 (26-132)||(34479275-34479379)
chr5 (26-151)||(10750017-10750137)
chr5 (26-151)||(10757493-10757613)
chr5 (31-151)||(15552569-15552685)
chr5 (18-83)||(39397916-39397981)
chr5 (26-126)||(31543052-31543149)
chr5 (29-132)||(4410343-4410442)
chr5 (1-151)||(9020506-9020649)
chr5 (1-151)||(31472458-31472605)
chr5 (2-65)||(15143754-15143817)
chr5 (31-152)||(23741696-23741813)
chr5 (21-60)||(4898033-4898071)
chr5 (31-151)||(15354414-15354530)
chr5 (31-151)||(15356690-15356806)
chr5 (21-126)||(15445141-15445242)
chr5 (31-151)||(23665368-23665484)
chr5 (31-151)||(23793103-23793219)
chr5 (21-94)||(2144474-2144544)
[»] chr3 (87 HSPs)
chr3 (1-152)||(12267818-12267966)
chr3 (1-152)||(32263880-32264029)
chr3 (1-151)||(43423308-43423454)
chr3 (1-132)||(27635515-27635649)
chr3 (1-151)||(43421260-43421406)
chr3 (1-151)||(1313675-1313822)
chr3 (1-126)||(1626549-1626674)
chr3 (1-151)||(32219351-32219503)
chr3 (1-152)||(15781145-15781294)
chr3 (2-133)||(28181271-28181401)
chr3 (1-151)||(51674608-51674757)
chr3 (1-151)||(18096740-18096891)
chr3 (1-149)||(5926611-5926756)
chr3 (1-149)||(48361511-48361662)
chr3 (1-152)||(53915337-53915487)
chr3 (1-133)||(53917522-53917655)
chr3 (1-126)||(3314951-3315077)
chr3 (1-151)||(6484626-6484773)
chr3 (1-151)||(36012093-36012243)
chr3 (1-144)||(880302-880442)
chr3 (1-126)||(53468319-53468444)
chr3 (1-151)||(4308122-4308272)
chr3 (1-152)||(24979974-24980127)
chr3 (1-151)||(18099010-18099161)
chr3 (2-92)||(47148795-47148885)
chr3 (1-151)||(18162929-18163080)
chr3 (1-133)||(4666780-4666912)
chr3 (1-120)||(51943636-51943758)
chr3 (1-152)||(3307026-3307177)
chr3 (1-151)||(41849325-41849470)
chr3 (1-145)||(880090-880231)
chr3 (1-133)||(45883206-45883341)
chr3 (4-151)||(54691417-54691562)
chr3 (1-147)||(27101026-27101172)
chr3 (1-151)||(6232066-6232208)
chr3 (21-145)||(47701526-47701645)
chr3 (1-151)||(28101848-28101993)
chr3 (1-122)||(53591451-53591570)
chr3 (26-151)||(1321777-1321897)
chr3 (26-151)||(10955867-10955986)
chr3 (26-151)||(10958163-10958282)
chr3 (1-131)||(43228557-43228687)
chr3 (11-152)||(9604446-9604585)
chr3 (1-144)||(25688005-25688151)
chr3 (27-151)||(5886496-5886618)
chr3 (27-151)||(5899969-5900091)
chr3 (26-151)||(25533723-25533842)
chr3 (1-151)||(42990570-42990717)
chr3 (26-151)||(50494297-50494417)
chr3 (1-151)||(43226349-43226495)
chr3 (28-132)||(5191951-5192052)
chr3 (1-151)||(23633719-23633862)
chr3 (1-73)||(39715731-39715804)
chr3 (21-151)||(28761287-28761412)
chr3 (26-132)||(10084245-10084348)
chr3 (26-132)||(10191168-10191271)
chr3 (26-151)||(25389204-25389326)
chr3 (2-151)||(31151612-31151754)
chr3 (26-151)||(11168399-11168519)
chr3 (1-152)||(17795525-17795670)
chr3 (1-152)||(19103965-19104110)
chr3 (26-151)||(456206-456325)
chr3 (26-151)||(458583-458702)
chr3 (27-151)||(747057-747177)
chr3 (31-132)||(53893910-53894009)
chr3 (21-132)||(561640-561747)
chr3 (25-112)||(26720844-26720929)
chr3 (26-151)||(38210669-38210789)
chr3 (26-131)||(38890338-38890441)
chr3 (26-151)||(10621366-10621488)
chr3 (26-151)||(3859808-3859930)
chr3 (26-151)||(51726847-51726966)
chr3 (26-151)||(6065633-6065754)
chr3 (1-88)||(8183040-8183125)
chr3 (26-159)||(4103728-4103855)
chr3 (27-132)||(7606459-7606563)
chr3 (26-151)||(28412870-28412989)
chr3 (28-111)||(11170670-11170752)
chr3 (15-76)||(54884366-54884427)
chr3 (26-132)||(5522482-5522586)
chr3 (31-151)||(22114143-22114258)
chr3 (61-151)||(42992712-42992799)
chr3 (2-151)||(36871149-36871291)
chr3 (22-151)||(25634173-25634294)
chr3 (26-151)||(6063283-6063404)
chr3 (21-134)||(7768855-7768962)
chr3 (1-57)||(42992536-42992594)
[»] chr8 (46 HSPs)
chr8 (1-132)||(30480365-30480496)
chr8 (1-135)||(14808103-14808237)
chr8 (1-151)||(15073053-15073202)
chr8 (1-152)||(33541254-33541403)
chr8 (1-151)||(14419035-14419183)
chr8 (1-151)||(35872301-35872446)
chr8 (1-126)||(37214132-37214257)
chr8 (1-151)||(28251410-28251560)
chr8 (1-122)||(36865879-36866002)
chr8 (1-126)||(41383004-41383131)
chr8 (1-151)||(15068323-15068472)
chr8 (1-151)||(14477593-14477740)
chr8 (1-154)||(13858331-13858478)
chr8 (1-83)||(181821-181901)
chr8 (26-151)||(3874367-3874487)
chr8 (1-151)||(25952863-25953010)
chr8 (28-133)||(43530491-43530593)
chr8 (26-151)||(27827359-27827479)
chr8 (26-151)||(22684491-22684614)
chr8 (2-132)||(31162555-31162683)
chr8 (19-133)||(27911439-27911551)
chr8 (19-133)||(27957858-27957970)
chr8 (26-152)||(27829670-27829791)
chr8 (30-151)||(18811085-18811202)
chr8 (26-151)||(3883436-3883556)
chr8 (26-151)||(28283062-28283182)
chr8 (26-151)||(4424392-4424512)
chr8 (2-151)||(2467979-2468122)
chr8 (21-126)||(27106770-27106872)
chr8 (1-148)||(1225509-1225644)
chr8 (21-153)||(5372023-5372155)
chr8 (26-152)||(15809592-15809712)
chr8 (1-151)||(15956300-15956443)
chr8 (30-152)||(18813259-18813377)
chr8 (26-133)||(43082347-43082451)
chr8 (26-151)||(609109-609230)
chr8 (4-92)||(41385089-41385180)
chr8 (26-126)||(44721217-44721314)
chr8 (21-151)||(15185564-15185689)
chr8 (2-151)||(21482653-21482798)
chr8 (26-152)||(24873038-24873161)
chr8 (26-151)||(32339683-32339803)
chr8 (61-151)||(3005486-3005572)
chr8 (26-133)||(43079976-43080080)
chr8 (2-151)||(21480845-21480990)
chr8 (21-62)||(31578216-31578256)
[»] chr1 (82 HSPs)
chr1 (1-151)||(2949079-2949227)
chr1 (1-151)||(4131221-4131370)
chr1 (3-156)||(18839876-18840027)
chr1 (1-153)||(50248415-50248565)
chr1 (1-151)||(50078635-50078787)
chr1 (1-126)||(14097838-14097964)
chr1 (1-145)||(11457328-11457470)
chr1 (1-149)||(25251123-25251269)
chr1 (1-151)||(17319173-17319321)
chr1 (1-153)||(12302347-12302500)
chr1 (1-133)||(31424878-31425010)
chr1 (1-151)||(47906556-47906704)
chr1 (1-151)||(18307395-18307543)
chr1 (1-151)||(31490198-31490345)
chr1 (4-126)||(13215373-13215495)
chr1 (1-152)||(27336781-27336935)
chr1 (1-151)||(28206912-28207063)
chr1 (1-151)||(23816172-23816323)
chr1 (1-151)||(27338973-27339126)
chr1 (19-151)||(3579431-3579560)
chr1 (1-151)||(39462805-39462956)
chr1 (15-151)||(47451930-47452065)
chr1 (27-151)||(6995540-6995662)
chr1 (21-148)||(9240937-9241062)
chr1 (1-160)||(40134231-40134387)
chr1 (21-151)||(25248398-25248526)
chr1 (19-125)||(17324378-17324484)
chr1 (1-151)||(50307389-50307540)
chr1 (1-151)||(16429244-16429387)
chr1 (9-151)||(31422706-31422847)
chr1 (1-126)||(28998117-28998248)
chr1 (1-126)||(29003833-29003964)
chr1 (31-152)||(39932398-39932515)
chr1 (21-151)||(14183455-14183579)
chr1 (30-159)||(30780361-30780490)
chr1 (1-126)||(38925351-38925476)
chr1 (1-106)||(50076563-50076667)
chr1 (26-151)||(13447117-13447236)
chr1 (1-151)||(41647206-41647355)
chr1 (26-132)||(15294694-15294797)
chr1 (1-133)||(15823832-15823968)
chr1 (26-152)||(9459276-9459397)
chr1 (26-152)||(9463103-9463224)
chr1 (26-133)||(51750357-51750461)
chr1 (26-151)||(10399669-10399791)
chr1 (26-151)||(31735365-31735484)
chr1 (26-151)||(46431548-46431668)
chr1 (26-151)||(13762154-13762275)
chr1 (9-126)||(25860276-25860392)
chr1 (31-152)||(15916706-15916822)
chr1 (21-148)||(18800426-18800548)
chr1 (35-151)||(51757862-51757973)
chr1 (27-126)||(2617836-2617933)
chr1 (26-151)||(16226486-16226607)
chr1 (1-147)||(17324482-17324631)
chr1 (26-151)||(23786157-23786278)
chr1 (26-132)||(2510202-2510305)
chr1 (26-152)||(16231881-16232003)
chr1 (1-108)||(16428940-16429043)
chr1 (26-151)||(20291774-20291894)
chr1 (61-151)||(30790250-30790337)
chr1 (31-133)||(16432705-16432805)
chr1 (28-151)||(8348905-8349021)
chr1 (1-151)||(17185979-17186122)
chr1 (26-151)||(20302759-20302879)
chr1 (1-111)||(6114991-6115097)
chr1 (26-151)||(28842812-28842931)
chr1 (21-151)||(43104493-43104615)
chr1 (26-151)||(47177680-47177801)
chr1 (26-151)||(24325981-24326101)
chr1 (26-111)||(28840997-28841080)
chr1 (2-133)||(13125326-13125451)
chr1 (26-151)||(47180031-47180152)
chr1 (35-151)||(51752696-51752805)
chr1 (4-66)||(6756817-6756877)
chr1 (1-122)||(25128159-25128280)
chr1 (26-151)||(13358891-13359011)
chr1 (1-113)||(15669279-15669387)
chr1 (9-57)||(27916789-27916836)
chr1 (61-107)||(26519328-26519373)
chr1 (2-56)||(26520061-26520114)
chr1 (1-36)||(50078779-50078815)
[»] scaffold0131 (2 HSPs)
scaffold0131 (1-151)||(14231-14377)
scaffold0131 (96-148)||(15386-15436)
[»] chr6 (51 HSPs)
chr6 (1-151)||(24338295-24338441)
chr6 (1-151)||(11982872-11983022)
chr6 (4-154)||(1069560-1069708)
chr6 (1-151)||(3629711-3629858)
chr6 (1-151)||(3631784-3631932)
chr6 (1-151)||(9020247-9020398)
chr6 (21-151)||(15367370-15367498)
chr6 (1-133)||(30728685-30728817)
chr6 (21-151)||(15346685-15346813)
chr6 (8-126)||(3394695-3394814)
chr6 (1-151)||(15530003-15530156)
chr6 (26-151)||(28241163-28241282)
chr6 (1-122)||(3233594-3233718)
chr6 (26-126)||(14507040-14507137)
chr6 (27-151)||(26065333-26065457)
chr6 (27-151)||(26085302-26085426)
chr6 (1-151)||(32280318-32280463)
chr6 (27-152)||(29754548-29754669)
chr6 (31-133)||(4816087-4816186)
chr6 (26-151)||(5273055-5273177)
chr6 (31-154)||(19704400-19704521)
chr6 (21-151)||(25480219-25480346)
chr6 (27-151)||(26065961-26066081)
chr6 (27-151)||(26068235-26068355)
chr6 (26-152)||(33311478-33311599)
chr6 (26-151)||(2628727-2628847)
chr6 (26-151)||(33309209-33309329)
chr6 (21-151)||(3027703-3027827)
chr6 (26-133)||(1230105-1230210)
chr6 (21-149)||(22490954-22491077)
chr6 (26-132)||(30967554-30967657)
chr6 (31-151)||(26932403-26932518)
chr6 (1-147)||(14466645-14466787)
chr6 (31-151)||(17012387-17012502)
chr6 (26-151)||(12195354-12195475)
chr6 (1-54)||(12161498-12161551)
chr6 (21-133)||(26945485-26945594)
chr6 (1-151)||(13057516-13057659)
chr6 (1-133)||(15541006-15541133)
chr6 (25-92)||(14458663-14458729)
chr6 (64-133)||(18322482-18322550)
chr6 (23-132)||(22611018-22611122)
chr6 (27-132)||(6610378-6610478)
chr6 (1-67)||(12186000-12186064)
chr6 (21-64)||(12937126-12937168)
chr6 (31-133)||(20915213-20915312)
chr6 (28-151)||(30034447-30034562)
chr6 (79-151)||(8717195-8717264)
chr6 (2-132)||(19696763-19696887)
chr6 (95-151)||(10584358-10584413)
chr6 (2-42)||(26505339-26505379)
[»] chr7 (70 HSPs)
chr7 (1-151)||(31434892-31435039)
chr7 (4-152)||(21680329-21680473)
chr7 (1-151)||(443892-444044)
chr7 (4-151)||(11355557-11355705)
chr7 (1-151)||(21678360-21678506)
chr7 (1-151)||(13099317-13099467)
chr7 (1-131)||(26804806-26804937)
chr7 (9-151)||(37411965-37412105)
chr7 (1-151)||(44724875-44725022)
chr7 (1-120)||(21592018-21592136)
chr7 (1-124)||(39145856-39145979)
chr7 (1-126)||(9679355-9679481)
chr7 (1-126)||(27306099-27306225)
chr7 (1-133)||(4295797-4295927)
chr7 (1-126)||(22251453-22251578)
chr7 (1-124)||(21990446-21990570)
chr7 (17-152)||(42330845-42330978)
chr7 (26-151)||(20297690-20297810)
chr7 (1-126)||(9681116-9681242)
chr7 (1-151)||(42223454-42223600)
chr7 (26-151)||(11759455-11759575)
chr7 (26-151)||(38394314-38394434)
chr7 (27-151)||(20299789-20299908)
chr7 (26-149)||(3036052-3036170)
chr7 (3-151)||(24465832-24465975)
chr7 (26-133)||(7471837-7471941)
chr7 (31-152)||(43253357-43253472)
chr7 (26-151)||(48457981-48458100)
chr7 (21-151)||(7188853-7188979)
chr7 (26-151)||(25542856-25542976)
chr7 (26-151)||(28485893-28486013)
chr7 (26-150)||(28487881-28488000)
chr7 (26-151)||(40836583-40836704)
chr7 (1-151)||(27832488-27832632)
chr7 (1-151)||(24748891-24749035)
chr7 (26-151)||(1606707-1606827)
chr7 (26-151)||(7469864-7469983)
chr7 (26-151)||(9027034-9027154)
chr7 (26-152)||(2935596-2935717)
chr7 (26-151)||(7351491-7351612)
chr7 (1-151)||(20626334-20626481)
chr7 (1-151)||(20630225-20630372)
chr7 (1-151)||(20642644-20642791)
chr7 (27-131)||(1850310-1850411)
chr7 (28-131)||(35959-36059)
chr7 (26-152)||(44892-45013)
chr7 (26-151)||(7094301-7094421)
chr7 (26-111)||(18345869-18345952)
chr7 (1-151)||(22394019-22394161)
chr7 (31-132)||(38396972-38397070)
chr7 (28-132)||(7092070-7092172)
chr7 (25-133)||(26295764-26295869)
chr7 (31-151)||(40946663-40946777)
chr7 (26-151)||(7349117-7349237)
chr7 (2-111)||(20091043-20091149)
chr7 (31-111)||(3878911-3878990)
chr7 (2-151)||(24813348-24813490)
chr7 (21-100)||(6349112-6349188)
chr7 (31-151)||(22137411-22137527)
chr7 (31-151)||(40552438-40552554)
chr7 (21-90)||(16296932-16296998)
chr7 (39-135)||(1046772-1046868)
chr7 (1-152)||(25276426-25276567)
chr7 (39-135)||(1049144-1049239)
chr7 (79-151)||(20136991-20137062)
chr7 (31-151)||(40550161-40550277)
chr7 (4-62)||(6046793-6046848)
chr7 (80-151)||(1502816-1502883)
chr7 (13-57)||(2990569-2990612)
chr7 (1-44)||(20137061-20137102)
[»] scaffold0005 (3 HSPs)
scaffold0005 (1-151)||(50307-50457)
scaffold0005 (1-151)||(52306-52456)
scaffold0005 (26-131)||(183500-183602)
[»] scaffold0045 (1 HSPs)
scaffold0045 (1-145)||(85526-85667)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-145)||(35889-36033)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-126)||(80154-80282)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-133)||(79480-79615)
[»] scaffold0468 (1 HSPs)
scaffold0468 (2-151)||(1493-1634)
[»] scaffold0038 (1 HSPs)
scaffold0038 (26-151)||(41325-41444)
[»] scaffold1674 (1 HSPs)
scaffold1674 (26-149)||(1294-1412)
[»] scaffold0025 (1 HSPs)
scaffold0025 (26-152)||(69132-69253)
[»] scaffold0154 (1 HSPs)
scaffold0154 (1-150)||(11315-11466)
[»] scaffold0370 (1 HSPs)
scaffold0370 (31-134)||(1308-1408)
[»] scaffold0127 (1 HSPs)
scaffold0127 (26-151)||(12715-12835)
[»] scaffold0339 (1 HSPs)
scaffold0339 (21-122)||(4309-4410)
[»] scaffold0068 (1 HSPs)
scaffold0068 (26-152)||(29497-29617)
[»] scaffold0472 (1 HSPs)
scaffold0472 (26-151)||(6526-6646)
[»] scaffold0057 (1 HSPs)
scaffold0057 (21-151)||(16501-16624)
[»] scaffold0267 (1 HSPs)
scaffold0267 (31-151)||(357-473)
[»] scaffold0891 (1 HSPs)
scaffold0891 (28-132)||(4535-4636)
[»] scaffold0250 (1 HSPs)
scaffold0250 (26-148)||(3206-3322)
[»] scaffold0140 (1 HSPs)
scaffold0140 (31-151)||(24723-24839)


Alignment Details
Target: chr4 (Bit Score: 218; Significance: 1e-120; HSPs: 91)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 6133177 - 6133437
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  6133177 ttgtgttctctcttcttttctctctcgttgttttctacttttgacttgtgtttataattgtttcatacactttgtttcggttgcttgattattccttgct 6133276  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaacaggaatgttacatttatttgcatattttgaattgacaccaaggctacttt 200  Q
     |||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||   |||||||||||||||||||||||    
T  6133277 ccacacatcaagtttgttattggtgtaattttttccatcgaattcacaactgtaatgttacatttatttgcata---tgaattgacaccaaggctacttt 6133373  T
Q  201 gtcacgaattgagccacttcctcgctgtactcgtgcgtgattaattaataccttatgaaacacg 264  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  6133374 gtcacgaattgagccacttcctcgctgtactcgtgcgtgattaattaataccttatgaagcacg 6133437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 2891632 - 2891780
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||  |||||    
T  2891632 ttgtgttctctcttcctttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttattttggttgcttgattattctttgct 2891731  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
     |||||||||| |||||||||||||| ||||||  ||||||||||||||||    
T  2891732 ccacacatcaagtttgttattggtgtgattttt--catcgaattcacaaca 2891780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 36921486 - 36921338
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||| ||| |||||| |||||||  ||||||    
T  36921486 ttgtgttctctcttcttttctctcttgctgttttctacttttggcttgtgtttataattgtttcatacactttattttggttgcctgattatcccttgct 36921387  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
     |||||||||| |||||||||||||| ||||||  |||||||||| |||||    
T  36921386 ccacacatcaagtttgttattggtgtgattttt--catcgaattcgcaaca 36921338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 40091408 - 40091259
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| | |||||    
T  40091408 ttgtgttctctcttcttttctctcttgctattttctacttttggcttgtgtttataattattccatacactttattttggttgcttgattatcttttgct 40091309  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
     |||||||||| |||||||||||||| | ||||| |||||||||| |||||    
T  40091308 ccacacatcaagtttgttattggtgtgaattttt-catcgaattcgcaaca 40091259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 14787424 - 14787274
Alignment:
Q  1 ttgtgttct-ctcttctttt-ctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttg 98  Q
    ||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||  ||||    
T  14787424 ttgtgttcttctcttctttttctctctagttgttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgcttgattatcccttg 14787325  T
Q  99 cttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    || |||||||||| |||||||||||||| ||||||  |||||||||| |||||    
T  14787324 ctccacacatcaagtttgttattggtgtgattttt--catcgaattcgcaaca 14787274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 14789423 - 14789273
Alignment:
Q  1 ttgtgttct-ctcttctttt-ctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttg 98  Q
    ||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||  ||||    
T  14789423 ttgtgttcttctcttctttttctctctagttgttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgcttgattatcccttg 14789324  T
Q  99 cttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    || |||||||||| |||||||||||||| ||||||  |||||||||| |||||    
T  14789323 ctccacacatcaagtttgttattggtgtgattttt--catcgaattcgcaaca 14789273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 22802727 - 22802577
Alignment:
Q  1 ttgtgttctctcttctttt-ctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttg 98  Q
    ||||||||| ||||||||| ||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||    
T  22802727 ttgtgttctatcttctttttctctcgctgttgctttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatcccttg 22802628  T
Q  99 cttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    || |||||||||| |||||||||||||| ||||||  ||||||||||||||||    
T  22802627 ctccacacatcaagtttgttattggtgtgattttt--catcgaattcacaaca 22802577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 36919577 - 36919435
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||| |||||||  ||||||    
T  36919577 ttgtgttctctcttcctttctctctcgctgttttctacttttgacttgtgtttataattgttccatacactttattttggttgcctgattatcccttgct 36919478  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattc 145  Q
     |||||||||| |||||||||||||| ||||||  ||||||||||    
T  36919477 ccacacatcaagtttgttattggtgtgattttt--catcgaattc 36919435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 38928170 - 38928024
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||||||| ||||  |||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||  ||||||    
T  38928170 ttgtgttctctcttcttttatctc--gttgttttctacttttggcttgtgattataactgttccatacactttgttttggttgcttgattatcccttgct 38928073  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
     |||||||||| |||||||||||||| ||||||  |||||||||| |||||    
T  38928072 ccacacatcaagtttgttattggtgtgattttt--catcgaattcgcaaca 38928024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 47563101 - 47563248
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||| |||||||| |  ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  47563101 ttgtgttctctcttcctttctctcgc--tgttttctacttttggcttatgtttataattgttccatacactttgttttggttgcttgattattccttgct 47563198  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
     |||||||||| ||||||||||||||  |||| | |||| |||||||||||    
T  47563199 ccacacatcaagtttgttattggtgtggttttct-catcaaattcacaaca 47563248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 24446647 - 24446502
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||  ||| ||    
T  24446647 ttgtgttctctcttcttttctctct---tgttttctacttttggcttgtgtttataatttttccatacactttattttggttgcttgattatcccttact 24446551  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    ||||||||||| ||||||||||||||   ||||  ||||||||||||||||    
T  24446550 tcacacatcaagtttgttattggtgt--gttttctcatcgaattcacaaca 24446502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 16453650 - 16453796
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    |||||||||||||||||||||||| |  |||||||||||||||||||||| |||||| |||| |||||||||||||| |||||| |||||||  ||||||    
T  16453650 ttgtgttctctcttcttttctctcac--tgttttctacttttggcttgtgattataactgtttcatacactttgttttggttgcctgattatcacttgct 16453747  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
     |||||||||| |||||||||||||| ||||||  ||||||||||||||||    
T  16453748 ccacacatcaagtttgttattggtgtgattttt--catcgaattcacaaca 16453796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 19 - 153
Target Start/End: Original strand, 27499406 - 27499538
Alignment:
Q  19 tctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgtt 118  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||| |||||  ||||| |||||||||| ||||||    
T  27499406 tctctctcgttgttttctacttttgacttgtgtttataattgttccataaactttgttttggttgcttggttattcattgctccacacatcaagtttgtt 27499505  T
Q  119 attggtgtaattttttccatcgaattcacaacagg 153  Q
    |||||||| ||||||  ||||||||||| ||||||    
T  27499506 attggtgtgattttt--catcgaattcagaacagg 27499538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 22800855 - 22800703
Alignment:
Q  1 ttgtgttctctcttctttt-ctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttg 98  Q
    ||||||||||||||||||| ||||| | |||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||  ||||    
T  22800855 ttgtgttctctcttctttttctctcgctgttgctttctacttttggcttgtgtttataattgttccatatactttgttttggttgcttgactatcccttg 22800756  T
Q  99 cttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaacagg 153  Q
    || | |||||||| |||||||||||||| ||||||  |||||||||| |||||||    
T  22800755 ctccccacatcaagtttgttattggtgtgattttt--catcgaattcgcaacagg 22800703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 21 - 151
Target Start/End: Original strand, 49088916 - 49089044
Alignment:
Q  21 tctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttat 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||  ||| ||  ||||||||| ||||||||    
T  49088916 tctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgactatcccttactcaacacatcaagtttgttat 49089015  T
Q  121 tggtgtaattttttccatcgaattcacaaca 151  Q
    |||||| ||||||  |||||||||| |||||    
T  49089016 tggtgtgattttt--catcgaattcgcaaca 49089044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 52942481 - 52942336
Alignment:
Q  1 ttgtgttctctcttcttttc-tctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttctt 97  Q
    |||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||| ||||||| ||||    
T  52942481 ttgtgttctctcttcttttcctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttgattgcctgattatctctt 52942382  T
Q  98 gcttcacacatcaaatttgttattggtgtaattttttccatcgaatt 144  Q
     || |||||||||||||||||||| |||| ||||||| |||||||||    
T  52942381 actccacacatcaaatttgttatttgtgtgatttttt-catcgaatt 52942336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 24879330 - 24879472
Alignment:
Q  1 ttgtgttctctcttc-ttttctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttg 98  Q
    ||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||         
T  24879330 ttgtgttctctcttccttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatt----- 24879424  T
Q  99 cttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaacag 152  Q
         |||||||| ||||||||||||||  |||||| |||||||||||||||||    
T  24879425 -----cacatcaagtttgttattggtgtggtttttt-catcgaattcacaacag 24879472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 12395838 - 12395713
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||| ||||| ||||||||| ||||||||||||| ||||||||||||| ||| |||| |||||||| |||||| |||||||  ||||||    
T  12395838 ttgtgttctctcttcctttctgtctcgttgtcttctacttttggcatgtgtttataatttttcgatactctttgttttggttgcctgattatcacttgct 12395739  T
Q  101 tcacacatcaaatttgttattggtgt 126  Q
     |||||||||| ||||||||||||||    
T  12395738 ccacacatcaagtttgttattggtgt 12395713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 12400800 - 12400675
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||| ||||| ||||||||| ||||||||||||| ||||||||||||| ||| |||| |||||||| |||||| |||||||  ||||||    
T  12400800 ttgtgttctctcttcctttctgtctcgttgtcttctacttttggcatgtgtttataatttttcgatactctttgttttggttgcctgattatcacttgct 12400701  T
Q  101 tcacacatcaaatttgttattggtgt 126  Q
     |||||||||| ||||||||||||||    
T  12400700 ccacacatcaagtttgttattggtgt 12400675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 24889136 - 24889286
Alignment:
Q  1 ttgtgttctctcttctttt-ctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttg 98  Q
    ||||||| ||||||||||| ||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| | ||||||| ||||    
T  24889136 ttgtgttatctcttctttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacactttgttttggttgttagattattccttg 24889235  T
Q  99 cttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    || |||||||| || ||||||||||||| || |||| |||||||||| |||||    
T  24889236 ctccacacatc-aagttgttattggtgtgatatttt-catcgaattcgcaaca 24889286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 33415481 - 33415352
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgc 99  Q
    |||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||| |||  |||||    
T  33415481 ttgtgttctctcttcttttctctcgc--tgttttctacttttggcttgtgtttataattgtcccatacactttgattttggttgcttgactatcccttgc 33415384  T
Q  100 ttcacacatcaaatttgttattggtgtaattt 131  Q
    | |||||||||| ||||||||| |||| ||||    
T  33415383 tccacacatcaagtttgttatttgtgtgattt 33415352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 5101273 - 5101404
Alignment:
Q  18 ttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgt 117  Q
    |||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||| |||||||||| |||  |||| | |||||||||| |||||    
T  5101273 ttctctctcggtgttttctccctttggcttgtgtttataattgttccatacactttgttttggttgcttgactatcccttgatccacacatcaagtttgt 5101372  T
Q  118 tattggtgtaattttttccatcgaattcacaaca 151  Q
    |||||||||   ||||  ||||||||||||||||    
T  5101373 tattggtgt--gttttctcatcgaattcacaaca 5101404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 13547494 - 13547620
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgc 99  Q
    ||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||| |||||  | |||||  ||||     
T  13547494 ttgtgttctctcttcctttctctctcgatcttttctacttttggcttgtgtttataattgttccatacactttgattttggttgtctaattatcacttgt 13547593  T
Q  100 ttcacacatcaaatttgttattggtgt 126  Q
    | |||||||||| ||||||||||||||    
T  13547594 tccacacatcaagtttgttattggtgt 13547620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 40637414 - 40637542
Alignment:
Q  1 ttgtgttctctcttctttt-ctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttg--tttcggttgcttgattatttct 96  Q
    ||||||||||||||||||| ||||| | |||||||||||||||||||||||| |||||||||||||||||||||||  ||| ||||||||||||||| ||    
T  40637414 ttgtgttctctcttctttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacactttgttttttggttgcttgattattcct 40637513  T
Q  97 tgcttcacacatcaaatttgttattggtgt 126  Q
    |||| |||||||| || |||||||||||||    
T  40637514 tgctccacacatc-aagttgttattggtgt 40637542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 36380690 - 36380834
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||| ||| ||| ||    
T  36380690 ttgtgttctctcttcttttctccttc--tgttttctacttttggcttgtgtttataattgtttcatacactttgttt-gattgcttgatcattacttact 36380786  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
     |||||||||||| | |||||||||| |||||   ||||||||| ||||||    
T  36380787 ccacacatcaaatattttattggtgtgatttt---catcgaattgacaaca 36380834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 21 - 152
Target Start/End: Original strand, 16455586 - 16455715
Alignment:
Q  21 tctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttat 120  Q
    ||||||| ||||||||| |||| |||| || |||||| ||||||||||||||||||| |||||| |||||||  |||||| |||||||||| ||||||||    
T  16455586 tctctcgctgttttctagttttagcttatgattataactgttccatacactttgttttggttgcctgattatcacttgctccacacatcaagtttgttat 16455685  T
Q  121 tggtgtaattttttccatcgaattcacaacag 152  Q
    |||||| ||||||  |||||||||||||||||    
T  16455686 tggtgtgattttt--catcgaattcacaacag 16455715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 26 - 152
Target Start/End: Complemental strand, 37089333 - 37089211
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||||||||| ||||||||||||||   ||||| |||||||||| |||||||||||||    
T  37089333 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatccattgctccacacatcaagtttgttattggtg 37089236  T
Q  126 taattttttccatcgaattcacaacag 152  Q
    | ||||||  |||||||||| ||||||    
T  37089235 tgattttt--catcgaattcgcaacag 37089211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 4215646 - 4215792
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||| |||||||||||| |   ||||||||||||||||||||| ||||||||||| ||||||||||||||  |||||||||||||| ||||||    
T  4215646 ttgtgttctct-ttcttttctctcgca--gttttctacttttggcttgtgattataattgtttcatacactttgtttttgttgcttgattattccttgct 4215742  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    ||||||||| || |||||||| |||| | ||||  |||||||||| |||||    
T  4215743 tcacacatc-aagttgttatttgtgtgagttttctcatcgaattcgcaaca 4215792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 27 - 126
Target Start/End: Original strand, 48486687 - 48486786
Alignment:
Q  27 gttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 126  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||  |||| | ||| |||||||||||||||||||||    
T  48486687 gttgttttctacttttggcttgtgtttataattgttccattcactttgttttagttgcttgattatcgcttgttccacgcatcaaatttgttattggtgt 48486786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 17662238 - 17662108
Alignment:
Q  1 ttgtgttctctcttcttttctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgc 99  Q
    ||||||||||||||||||| |||| | ||||||||||||||||||| |||| ||||||||||||||||||||||| || | ||||||||||||  |||||    
T  17662238 ttgtgttctctcttctttt-tctcgctgttgttttctacttttggcatgtgattataattgttccatacactttggtttgattgcttgattatcccttgc 17662140  T
Q  100 ttcacacatcaaatttgttattggtgtaatttt 132  Q
    | |||||||| || ||||||||||||| |||||    
T  17662139 tccacacatc-aagttgttattggtgtgatttt 17662108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 36378633 - 36378777
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    |||||||||||||||||||||| || | |||||||||||||| | ||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||    
T  36378633 ttgtgttctctcttcttttctc-ct-gctgttttctacttttcgtttgtgtttataattgtttcatacactttgttt-ggttgcttgattattacttgct 36378729  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
     |||| ||||| | | |||||||||| |||||   |||||||||| |||||    
T  36378730 ccacatatcaagtattttattggtgtgatttt---catcgaattcgcaaca 36378777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 133
Target Start/End: Complemental strand, 37313052 - 37312940
Alignment:
Q  21 tctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttat 120  Q
    ||||||| ||||||||||||||||||| || ||||||||||| |||||||||||||| |||||||||| |||  |||||| |||||||||| ||| ||||    
T  37313052 tctctcgctgttttctacttttggcttatgattataattgtttcatacactttgttttggttgcttgactatcccttgctccacacatcaagtttattat 37312953  T
Q  121 tggtgtaattttt 133  Q
    |||||| ||||||    
T  37312952 tggtgtgattttt 37312940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 31 - 152
Target Start/End: Complemental strand, 3824569 - 3824446
Alignment:
Q  31 ttttctactttt-ggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaa 128  Q
    |||||||||||| ||||||||||||||| ||||||||||| |||| ||| |||||||||| |||  |||||| |||||||||| |||||||||||||| |    
T  3824569 ttttctactttttggcttgtgtttataactgttccatacattttgattttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtga 3824470  T
Q  129 ttttttccatcgaattcacaacag 152  Q
    |||||  |||||||||||||||||    
T  3824469 tttttctcatcgaattcacaacag 3824446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 25 - 151
Target Start/End: Complemental strand, 22046648 - 22046526
Alignment:
Q  25 tcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggt 124  Q
    ||||||||||||||||||| ||||| ||||  ||||||||||||||||||||| ||||||||||||||  |||||| |||||||| || |||||||||||    
T  22046648 tcgttgttttctacttttgacttgtattta--attgttccatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggt 22046552  T
Q  125 gtaattttttccatcgaattcacaaca 151  Q
    || | |||||| |||||||||||||||    
T  22046551 gtga-tttttcgatcgaattcacaaca 22046526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 131
Target Start/End: Original strand, 14633690 - 14633792
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||  ||||||||||||| |||||||||||||||||||||| ||||||| |||||||| || ||||||||||||    
T  14633690 cgttgttttctacttttggcttgtattta--attgttccatacattttgtttcggttgcttgattatctcttgctccacacatc-aagttgttattggtg 14633786  T
Q  126 taattt 131  Q
    | ||||    
T  14633787 tgattt 14633792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 154
Target Start/End: Complemental strand, 31849554 - 31849437
Alignment:
Q  31 ttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 130  Q
    ||||||||||||||||||| ||||  ||||||||||||||||||||| |||||||||||||| ||||||| |||||||| || ||||||||||||| |||    
T  31849554 ttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatctcttgctccacacatc-aagttgttattggtgtgatt 31849458  T
Q  131 ttttccatcgaattcacaacagga 154  Q
    ||   |||||||||| ||||||||    
T  31849457 tt---catcgaattcgcaacagga 31849437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 151
Target Start/End: Complemental strand, 38890217 - 38890072
Alignment:
Q  2 tgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgctt 101  Q
    |||||||||||||  ||| ||||||| ||||||||| ||||| ||||||||||||| |  |||||||||||||||| ||||||| ||||||| ||||||     
T  38890217 tgtgttctctctttcttt-tctctcgctgttttctaattttgccttgtgtttataact--tccatacactttgttt-ggttgctagattattccttgctc 38890122  T
Q  102 cacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    |||| ||||||| | |||||||||| |||||||  |||||||||||||||    
T  38890121 cacatatcaaatattttattggtgtgattttttttatcgaattcacaaca 38890072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 51015617 - 51015738
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||    
T  51015617 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtg 51015713  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    |  ||||||| | |||||||||||||    
T  51015714 t-gttttttcgaacgaattcacaaca 51015738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 26 - 152
Target Start/End: Complemental strand, 2484834 - 2484714
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||||| ||| ||||||||||||||  |||||| |||||||| || ||||||||||||    
T  2484834 cgttgttttctacttttggcttgtattta--attgttccatacactttattttggttgcttgattatcccttgctccacacatc-aagttgttattggtg 2484738  T
Q  126 taattttttccatcgaattcacaacag 152  Q
    | |||||   |||||||||||||||||    
T  2484737 tgatttt---catcgaattcacaacag 2484714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 26 - 152
Target Start/End: Original strand, 6765216 - 6765336
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||| ||||||| |||||||||   ||||||||||||||| ||||||||||||||  ||| || |||||||||| |||||||||||||    
T  6765216 cgttgttttctacttt-ggcttgtatttataatt---ccatacactttgttttggttgcttgattatcccttactccacacatcaagtttgttattggtg 6765311  T
Q  126 taattttttccatcgaattcacaacag 152  Q
    | ||||||  |||||||||||||||||    
T  6765312 tgattttt--catcgaattcacaacag 6765336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 24880792 - 24880936
Alignment:
Q  1 ttgtgttctctcttc-ttttctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactt--tgtttcggttgcttgattatttct 96  Q
    ||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||| |||||||  ||||| |||||||||||||||       
T  24880792 ttgtgttctctcttccttttctctcgctgttgttttctacttttggcttgtgtttataattgttccgtacactttgtgttttggttgcttgattatt--- 24880888  T
Q  97 tgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaacag 152  Q
           |||||||| ||||||||||||||  |||||| |||||||||||||||||    
T  24880889 -------cacatcaagtttgttattggtgtggtttttt-catcgaattcacaacag 24880936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 151
Target Start/End: Complemental strand, 18409324 - 18409192
Alignment:
Q  16 ttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaattt 115  Q
    |||| ||||||| | ||||||||||||| |||||| |||||| |  |||||||||||||||| |||||||||| |||  |||||| |||||||||| |||    
T  18409324 ttttttctctcgctattttctacttttgtcttgtgattataact--tccatacactttgttttggttgcttgactatcacttgctccacacatcaagttt 18409227  T
Q  116 gttattggtgtaattttttccatcgaattcacaaca 151  Q
     |||||||||| ||||||| ||||||||||||||||    
T  18409226 attattggtgtgatttttt-catcgaattcacaaca 18409192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 22044352 - 22044229
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||  |||||| |||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||    
T  22044352 cgttgttttctacttttggcttgtattta--attgtttcatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtg 22044256  T
Q  126 taattttttccatcgaattcacaacagg 153  Q
    | | |||||| ||| |||||||||||||    
T  22044255 tta-tttttcgatcaaattcacaacagg 22044229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 152
Target Start/End: Complemental strand, 5635437 - 5635317
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||||||||| ||||| ||||||||  |||||| |||||||| || ||||||||||||    
T  5635437 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgattgattatcccttgctccacacatc-aagttgttattggtg 5635341  T
Q  126 taattttttccatcgaattcacaacag 152  Q
    | |||||   |||||||||| ||||||    
T  5635340 tgatttt---catcgaattcgcaacag 5635317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 126
Target Start/End: Original strand, 9148607 - 9148704
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||||||||| |||||||||||||| ||||| | |||||||| || ||||||||||||    
T  9148607 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatctcttgttccacacatc-aagttgttattggtg 9148703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 11437734 - 11437855
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggt 124  Q
    |||||||||||||||||||||||| ||  |||||||||||||||||||| ||| || ||||||||||| ||||||| || ||||| || |||||||||||    
T  11437734 cgttgttttctacttttggcttgtatt--taattgttccatacactttgtttttggctgcttgattatctcttgctccatacatc-aagttgttattggt 11437830  T
Q  125 gtaattttttccatcgaattcacaaca 151  Q
    || ||||||  ||||||||||||||||    
T  11437831 gtgattttt--catcgaattcacaaca 11437855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 47210755 - 47210655
Alignment:
Q  28 ttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgta 127  Q
    |||||||||||||||||||||| ||||  ||||||||||||||||||||| |||||||| ||||| ||||||| |||||||| || |||||||||||||     
T  47210755 ttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgctttattatctcttgctccacacatc-aagttgttattggtgtg 47210659  T
Q  128 attt 131  Q
    ||||    
T  47210658 attt 47210655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 29 - 151
Target Start/End: Original strand, 53405508 - 53405626
Alignment:
Q  29 tgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaa 128  Q
    ||||||||||||||||||||| ||||||| |  |||||||| ||||||| ||||||||||||||  |||||| |||||||||| ||| |||||||||| |    
T  53405508 tgttttctacttttggcttgtatttataact--tccatacattttgttttggttgcttgattatcccttgctccacacatcaagtttattattggtgtga 53405605  T
Q  129 ttttttccatcgaattcacaaca 151  Q
    |||||  |||||||||| |||||    
T  53405606 ttttt--catcgaattcgcaaca 53405626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 28 - 133
Target Start/End: Original strand, 11435328 - 11435431
Alignment:
Q  28 ttgttttctacttttggcttgtgtttataattgttccatacactttgtttc-ggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 126  Q
    |||||||||||||||||||||| ||||  |||||||||||||||||||||  |||||||||||||| ||||||| |||||||| || |||||||||||||    
T  11435328 ttgttttctacttttggcttgtattta--attgttccatacactttgtttttggttgcttgattatctcttgctccacacatc-aagttgttattggtgt 11435424  T
Q  127 aattttt 133  Q
     ||||||    
T  11435425 gattttt 11435431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 151
Target Start/End: Complemental strand, 11006209 - 11006094
Alignment:
Q  31 ttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 130  Q
    |||||||||||| |||||| ||||  ||||||||||||||||||||| ||||||||||||||  |||||| |||||||| || |||||||||||||   |    
T  11006209 ttttctactttttgcttgtattta--attgttccatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgt--gt 11006115  T
Q  131 ttttccatcgaattcacaaca 151  Q
    ||||| |||||||||||||||    
T  11006114 ttttcgatcgaattcacaaca 11006094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 151
Target Start/End: Complemental strand, 11008523 - 11008408
Alignment:
Q  31 ttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 130  Q
    |||||||||||| |||||| ||||  ||||||||||||||||||||| ||||||||||||||  |||||| |||||||| || |||||||||||||   |    
T  11008523 ttttctactttttgcttgtattta--attgttccatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgt--gt 11008429  T
Q  131 ttttccatcgaattcacaaca 151  Q
    ||||| |||||||||||||||    
T  11008428 ttttcgatcgaattcacaaca 11008408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 21 - 122
Target Start/End: Original strand, 47275084 - 47275185
Alignment:
Q  21 tctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttat 120  Q
    ||||||| ||||||||||||||||||||||||||||||| ||| ||||||||  ||| | ||||||||||||  ||| || |||||||||| ||||||||    
T  47275084 tctctcgctgttttctacttttggcttgtgtttataattattctatacacttcattttgattgcttgattatcccttactccacacatcaagtttgttat 47275183  T
Q  121 tg 122  Q
    ||    
T  47275184 tg 47275185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 24348573 - 24348692
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||| ||||||||||| ||||   |||||||||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||    
T  24348573 cgttgttttctatttttggcttgtatttag--ttgttccatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtg 24348669  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | |||||   |||||||||| |||||    
T  24348670 tgatttt---catcgaattcgcaaca 24348692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 31 - 151
Target Start/End: Original strand, 5198781 - 5198895
Alignment:
Q  31 ttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 130  Q
    ||||||||||||||||||| ||||  ||||||||||||||||||||| ||||||||||||||   ||||| |||||||| || || |||||||||| |||    
T  5198781 ttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatccattgctccacacatc-aagttattattggtgtgatt 5198877  T
Q  131 ttttccatcgaattcacaaca 151  Q
    ||   ||||||||||||||||    
T  5198878 tt---catcgaattcacaaca 5198895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 31 - 151
Target Start/End: Complemental strand, 8631374 - 8631260
Alignment:
Q  31 ttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 130  Q
    ||||||||||||||||||| ||||  |||||||||||||||||||||  |||||||||||||  |||||| |||||||| || ||||||||||||| |||    
T  8631374 ttttctacttttggcttgtattta--attgttccatacactttgttttagttgcttgattatcccttgctccacacatc-aagttgttattggtgtgatt 8631278  T
Q  131 ttttccatcgaattcacaaca 151  Q
    ||   |||||||||| |||||    
T  8631277 tt---catcgaattcgcaaca 8631260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 16931751 - 16931631
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||  ||||| |||||||| |||||||| |||||||| |||||  |||||| |||||||  || ||||||||||||    
T  16931751 cgttgttttctacttttggcttgtatt--taattattccatacgctttgttttggttgcttaattatcccttgctccacacat-taagttgttattggtg 16931655  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | ||||||  ||||||||||||||||    
T  16931654 tgattttt--catcgaattcacaaca 16931631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 38409576 - 38409696
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||  ||||||||||||| |||||||  |||||||||||||  |||||| |||||||| || ||||||||||||    
T  38409576 cgttgttttctacttttggcttgtattta--attgttccatacaatttgttttagttgcttgattatcccttgctccacacatc-aagttgttattggtg 38409672  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    |   |||||| || ||||||||||||    
T  38409673 t--gtttttcgattgaattcacaaca 38409696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 132
Target Start/End: Complemental strand, 9176429 - 9176331
Alignment:
Q  31 ttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 130  Q
    ||||||||||||||||||| ||||  ||| ||||||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||| |||    
T  9176429 ttttctacttttggcttgtattta--attattccatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgatt 9176333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 18709124 - 18709003
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||| ||||||||| ||||||| | |  |||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||    
T  18709124 cgttgttttctactattggcttgtatttataacttt--catacactttgttttggttgcttgattatgccttgctccacacatc-aagttgttattggtg 18709028  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    |  |||||| |||| |||||||||||    
T  18709027 tggtttttt-catcaaattcacaaca 18709003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 47868773 - 47868894
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggt 124  Q
    |||||||||||||||||||||||| ||  | |||||||||||||||||| ||| |||||| |||||||  |||||| |||||||| || |||||||||||    
T  47868773 cgttgttttctacttttggcttgtatt--ttattgttccatacactttgattttggttgcctgattatcccttgctccacacatc-aagttgttattggt 47868869  T
Q  125 gtaattttttccatcgaattcacaaca 151  Q
    || ||||||  |||||||||| |||||    
T  47868870 gtgattttt--catcgaattcgcaaca 47868894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 151
Target Start/End: Original strand, 5664576 - 5664722
Alignment:
Q  2 tgtgttctctctt-cttttctctc-tcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgc 99  Q
    ||||||||||||| |||||||||| |   |||||||||||||||| ||||  |||||| |  |||||||||||||||| ||||||||||||||| | | |    
T  5664576 tgtgttctctctttcttttctctcgttaatgttttctacttttggtttgtcattataact--tccatacactttgttttggttgcttgattattaccttc 5664673  T
Q  100 ttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    | |||||||||| | | |||||||||| |||||   ||||||||||||||||    
T  5664674 tccacacatcaagtattttattggtgtgatttt---catcgaattcacaaca 5664722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 18534807 - 18534705
Alignment:
Q  21 tctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttat 120  Q
    ||||||| | |||||||||||||  |||||||||||| |  |||||||||||||||| ||||||||||||||| |||||| |||||||||| | | ||||    
T  18534807 tctctcgctattttctacttttgt-ttgtgtttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttat 18534711  T
Q  121 tggtgt 126  Q
    ||||||    
T  18534710 tggtgt 18534705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 28454024 - 28454130
Alignment:
Q  2 tgtgttctctcttcttttctctctc--gttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgc 99  Q
    |||||||||||||  ||||| ||||  ||||||||||||||||| |||||||||||||||||  ||| |||||||||| |||| ||||||||||  ||||    
T  28454024 tgtgttctctctttctttctttctccggttgttttctacttttg-cttgtgtttataattgt--catccactttgttttggtttcttgattatt--ttgc 28454118  T
Q  100 ttcacacatcaa 111  Q
    ||||||||||||    
T  28454119 ttcacacatcaa 28454130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 154
Target Start/End: Original strand, 7941697 - 7941817
Alignment:
Q  28 ttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgta 127  Q
    |||||||||||||||| ||||| |||   ||||||||||||||||||||| |||||||| |||||  |||||| |||||||| || ||||| |||||||     
T  7941697 ttgttttctacttttgccttgtatttc--attgttccatacactttgttttggttgcttaattatcccttgctccacacatc-aagttgttgttggtgtg 7941793  T
Q  128 attttttccatcgaattcacaacagga 154  Q
    |||||   |||||||||| ||||||||    
T  7941794 atttt---catcgaattcgcaacagga 7941817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 133
Target Start/End: Original strand, 18847524 - 18847628
Alignment:
Q  26 cgttgttttctactttt-ggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggt 124  Q
    ||||||||||||||||| ||||||| ||||  ||| ||||||||||||||||| ||||||||||||||  |||||| |||||||| || |||||||||||    
T  18847524 cgttgttttctactttttggcttgtattta--attattccatacactttgttt-ggttgcttgattatcccttgctccacacatc-aagttgttattggt 18847619  T
Q  125 gtaattttt 133  Q
    || ||||||    
T  18847620 gtgattttt 18847628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 151
Target Start/End: Original strand, 56030820 - 56030945
Alignment:
Q  21 tctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttat 120  Q
    ||||||| |||||||||||||||  |||| ||||||| |  |||||||||||||||| |||||| ||| ||| ||||||| |||| ||||| ||| ||||    
T  56030820 tctctcgctgttttctacttttgt-ttgtatttataact--tccatacactttgttttggttgcgtgactatctcttgctccacatatcaagtttattat 56030916  T
Q  121 tggtgtaattttttccatcgaattcacaaca 151  Q
    |||||| ||||||  |||||||||| |||||    
T  56030917 tggtgtgattttt--catcgaattcgcaaca 56030945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 151
Target Start/End: Complemental strand, 9174101 - 9173987
Alignment:
Q  31 ttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 130  Q
    ||||||||||||||||||| ||||  ||| || |||||||||||||| ||||||||||||||  |||||| |||||||| || |||||||| |||| |||    
T  9174101 ttttctacttttggcttgtattta--attatttcatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattagtgtgatt 9174005  T
Q  131 ttttccatcgaattcacaaca 151  Q
    ||   |||||||||| |||||    
T  9174004 tt---catcgaattcgcaaca 9173987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 111
Target Start/End: Complemental strand, 18537449 - 18537362
Alignment:
Q  21 tctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaa 111  Q
    |||||||||||||| ||||||||  |||||||||||| |  |||||||||||||||| | ||||||||||||| |||||| ||||||||||    
T  18537449 tctctcgttgttttatacttttgt-ttgtgtttataact--tccatacactttgttttgattgcttgattattacttgctccacacatcaa 18537362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 22134567 - 22134480
Alignment:
Q  36 tacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 126  Q
    |||||||||||||| ||||  ||||||||||||||||||||| ||||| ||||||||  |||||| |||||||| || |||||||||||||    
T  22134567 tacttttggcttgtattta--attgttccatacactttgttttggttgtttgattatcccttgctccacacatc-aagttgttattggtgt 22134480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 152
Target Start/End: Complemental strand, 31983507 - 31983382
Alignment:
Q  21 tctctcgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgtta 119  Q
    ||||||||||||||||||||||  ||||||||||||||||||||   ||| ||| | | |||||||||||||||  ||||| |||||||||||| | |||    
T  31983507 tctctcgttgttttctactttt-acttgtgtttataattgttcc---cacgttgatattggttgcttgattatt--ttgctccacacatcaaatatttta 31983414  T
Q  120 ttggtgtaattttttccatcgaattcacaacag 152  Q
    ||| ||| ||||||| ||||||||| |||||||    
T  31983413 ttgatgtgatttttt-catcgaatttacaacag 31983382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 44599799 - 44599680
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||| ||||| ||  ||||| |||||||| |||||||| |||||||| |||| | |||||| |||||||| || ||||||||||||    
T  44599799 cgttgttttctacttttgccttgtatt--taattattccatacgctttgttttggttgcttaatta-tccttgctccacacatc-aagttgttattggtg 44599704  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | ||||||  |||||||||| |||||    
T  44599703 tgattttt--catcgaattcgcaaca 44599680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 3937267 - 3937126
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||  ||||||||  |||||||||||||||||  ||||| || ||  | ||||||||||||||||| ||||||||||||||  ||||||    
T  3937267 ttgtgttctctctttctttctctc--gttgttttctacttttgt-ttgtgatttta--tcttccatacactttgttt-ggttgcttgattatcccttgct 3937174  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
     | |||||| || ||||||||||||| ||||||  |||||||||| |||||    
T  3937173 cctcacatc-aagttgttattggtgtgattttt--catcgaattcgcaaca 3937126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 21 - 151
Target Start/End: Complemental strand, 8756226 - 8756103
Alignment:
Q  21 tctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttat 120  Q
    |||||||||||||| ||||||| |||||||||||||| |||  ||  ||| |||||| ||||||||||||||| |||||| |||||||||| | | ||||    
T  8756226 tctctcgttgttttttactttt-gcttgtgtttataactgt--cacccac-ttgttttggttgcttgattattacttgctccacacatcaagtattttat 8756131  T
Q  121 tggtgtaattttttccatcgaattcacaaca 151  Q
    || ||| |||||   ||||||||||||||||    
T  8756130 tgatgtgatttt---catcgaattcacaaca 8756103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 29 - 151
Target Start/End: Original strand, 12102450 - 12102566
Alignment:
Q  29 tgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaa 128  Q
    |||||| |||||||| ||||||||||||| |  |||||||||||||||| ||||||| | ||||| |||||| |||||||||| |   |||||||||| |    
T  12102450 tgttttttacttttg-cttgtgtttataact--tccatacactttgttttggttgctcggttattacttgctccacacatcaagtagtttattggtgtga 12102546  T
Q  129 ttttttccatcgaattcacaaca 151  Q
    ||||   ||||||||||||||||    
T  12102547 tttt---catcgaattcacaaca 12102566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 29 - 151
Target Start/End: Original strand, 19323061 - 19323177
Alignment:
Q  29 tgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaa 128  Q
    |||||| |||||||| || |||||||||| |  |||||||||||| |||  |||||||||||||| |||||| |||||||||| | | |||||||||| |    
T  19323061 tgttttatacttttg-ctcgtgtttataact--tccatacactttattttagttgcttgattattacttgctccacacatcaagtattttattggtgtga 19323157  T
Q  129 ttttttccatcgaattcacaaca 151  Q
    ||||   ||||||||||||||||    
T  19323158 tttt---catcgaattcacaaca 19323177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 2 - 149
Target Start/End: Original strand, 25357984 - 25358122
Alignment:
Q  2 tgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtt-tcggttgcttgattatttcttgct 100  Q
    |||||||||||||||||   ||||||||||||||||||||| |||||||||||||||||||||   ||| ||||| | ||||||||||||  |  || ||    
T  25357984 tgtgttctctcttcttt---ctctcgttgttttctactttt-gcttgtgtttataattgttcc---cacgttgttattggttgcttgattgct--ttcct 25358074  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaa 149  Q
     |||||||||| | | |||||||||| ||||||| || |||||||||||    
T  25358075 ccacacatcaagtattttattggtgtgatttttt-caacgaattcacaa 25358122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 41997851 - 41997952
Alignment:
Q  22 ctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttatt 121  Q
    |||||| |||||||||||||||  ||||| |||||| |  |||||||||||||||| ||||||||||||||  ||| || |||||||||| ||| |||||    
T  41997851 ctctcgctgttttctacttttgt-ttgtgattataact--tccatacactttgttttggttgcttgattatcactttctccacacatcaagtttattatt 41997947  T
Q  122 ggtgt 126  Q
    |||||    
T  41997948 ggtgt 41997952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 10113226 - 10113335
Alignment:
Q  19 tctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgtt 118  Q
    ||||||||  |||| |||||||||| ||||||||||||| |||  ||  |||||||||| |||||||||||||||  ||||| |||||||||||| | ||    
T  10113226 tctctctcaatgttatctacttttg-cttgtgtttataaatgt--cacccactttgttttggttgcttgattatt--ttgctccacacatcaaatatttt 10113320  T
Q  119 attggtgtaattttt 133  Q
    |||||||| ||||||    
T  10113321 attggtgtgattttt 10113335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 22132340 - 22132252
Alignment:
Q  36 tacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 126  Q
    |||||||||||||| ||||  |||||||||||||||||| ||| ||||||||||||||  |||||| |||||||| || |||||||||||||    
T  22132340 tacttttggcttgtattta--attgttccatacactttgtttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgt 22132252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 126
Target Start/End: Complemental strand, 26085938 - 26085840
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggt 124  Q
    |||||||||||||||||||||||| |||||||   || ||||||||||| ||| |||||||||| |||  |||||| |||||||| || |||||||||||    
T  26085938 cgttgttttctacttttggcttgtatttataa--ctttcatacactttgattttggttgcttgactatcccttgctccacacatc-aagttgttattggt 26085842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 133
Target Start/End: Complemental strand, 22782698 - 22782593
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggt 124  Q
    |||||||||||||||||||||||| |||||||   || ||||| ||||| ||| |||||||| |||||  |||||| |||||||| || |||||||||||    
T  22782698 cgttgttttctacttttggcttgtatttataa--ctttcatacgctttgtttttggttgcttaattatcccttgctccacacatc-aagttgttattggt 22782602  T
Q  125 gtaattttt 133  Q
    || ||||||    
T  22782601 gtgattttt 22782593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 30136890 - 30136998
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||  ||| ||||| |||||||||||||||||| ||||||||||||   ||| ||||||||| ||| ||||| ||||||||| |||| |    
T  30136890 ttgtgttctctctttcttt-tctcttgttgttttctacttttggtttgtgtttataa--cttctatacactttattt-ggttgtttgattattacttgtt 30136985  T
Q  101 tcacacatcaaat 113  Q
     |||| |||||||    
T  30136986 ccacatatcaaat 30136998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 132
Target Start/End: Complemental strand, 15032480 - 15032410
Alignment:
Q  61 ttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatttt 132  Q
    ||||||||||||||||| ||||||||||||||| |||||| | |||||||| | | |||||||||| |||||    
T  15032480 ttccatacactttgttt-ggttgcttgattattacttgctccgcacatcaagtattttattggtgtgatttt 15032410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 151
Target Start/End: Complemental strand, 16185827 - 16185686
Alignment:
Q  2 tgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgctt 101  Q
    ||||||||||||| |||| | |||||||||||||||||||| |||||||||||||| |||  ||  ||| |||||| ||||||||||||| |  |||||     
T  16185827 tgtgttctctctt-ttttgtttctcgttgttttctactttt-gcttgtgtttataactgt--cacccac-ttgttttggttgcttgattaat--ttgctc 16185735  T
Q  102 cacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    || ||||||| | | |||||||||| || |||| || |||||||||||||    
T  16185734 catacatcaagtattttattggtgtgatctttt-caacgaattcacaaca 16185686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 126
Target Start/End: Complemental strand, 38270091 - 38270017
Alignment:
Q  49 tgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 126  Q
    ||||||||||||||||||||   |||||| |||||||||| |||  ||| || |||||||||| ||||||||||||||    
T  38270091 tgtttataattgttccatac---ttgttttggttgcttgactatcccttactccacacatcaagtttgttattggtgt 38270017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 151
Target Start/End: Original strand, 9864070 - 9864196
Alignment:
Q  21 tctctcgttgttttctacttttggcttgtg--tttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgtt 118  Q
    |||||||||||||||||||||| |||||||  ||||||| ||||||   |||||| ||| |||| ||||||||||| ||  | |||||||||| | | ||    
T  9864070 tctctcgttgttttctactttt-gcttgtgattttataactgttcc---cactttattttggtttcttgattattttttcttccacacatcaagtatttt 9864165  T
Q  119 attggtgtaattttttccatcgaattcacaaca 151  Q
    |||| ||| ||||||  || |||||||||||||    
T  9864166 attgatgtgattttt--caacgaattcacaaca 9864196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 16934105 - 16933988
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||  ||||| |||||||| | |||||| |||||||| ||  |  |||||| |||||||  || ||||||||||||    
T  16934105 cgttgttttctacttttggcttgtatt--taattattccatacgc-ttgttttggttgcttaat--tcccttgctccacacat-taagttgttattggtg 16934012  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | ||||||  ||||||||||||||||    
T  16934011 tgattttt--catcgaattcacaaca 16933988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 18311270 - 18311215
Alignment:
Q  95 cttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    |||||| |||||||||| ||| |||||||||| |||||||| |||||||||||||||    
T  18311270 cttgctccacacatcaagtttattattggtgtgattttttc-atcgaattcacaaca 18311215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 22295506 - 22295565
Alignment:
Q  2 tgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttcc 64  Q
    |||||||||||||| |||||||| |  |||||||||| |||| ||||||||||||||||||||    
T  22295506 tgtgttctctcttcctttctctcgc--tgttttctacctttg-cttgtgtttataattgttcc 22295565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 126
Target Start/End: Complemental strand, 40998986 - 40998892
Alignment:
Q  28 ttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 126  Q
    |||||||||||||||  ||||||||||||| |||  ||  ||||| |||| ||||||||||||||| |||| |||||||||||||| | ||||| ||||    
T  40998986 ttgttttctactttta-cttgtgtttataactgt--cacccactt-gttttggttgcttgattattacttgtttcacacatcaaatattttatttgtgt 40998892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 47150886 - 47150826
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttcc 64  Q
    ||||||||||||||  ||||||||  ||||| |||||||||||  |||||||||||||||||||    
T  47150886 ttgtgttctctctttctttctctc--gttgtcttctacttttgt-ttgtgtttataattgttcc 47150826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 116; Significance: 5e-59; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 19007902 - 19008052
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  19007902 ttgtgttctctattcatttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattattccttgct 19008001  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaacag 152  Q
     |||||||||| |||||||||||||| ||||||| |||||||||||||||||    
T  19008002 ccacacatcaagtttgttattggtgtgatttttt-catcgaattcacaacag 19008052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 17849379 - 17849531
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||  ||||||    
T  17849379 ttgtgttctctcttcctttctctcccgttgttttctacttttggcttgtgtttaaaattgttccatacactttgttttggttgcttgactatcccttgct 17849478  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaacagga 154  Q
     |||||||||| |||||||||||||| ||||||| |||||||||||||||||||    
T  17849479 ccacacatcaagtttgttattggtgtgatttttt-catcgaattcacaacagga 17849531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 28196897 - 28197045
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| || |||  ||||||    
T  28196897 ttgtgttctctcttcttttctctctcgctgttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgctggactatcccttgct 28196996  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
     ||||||||||||||||||||||||| ||||||  ||||||| ||||||||    
T  28196997 ccacacatcaaatttgttattggtgtgattttt--catcgaactcacaaca 28197045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 22707744 - 22707595
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||| ||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||| || ||| ||    
T  22707744 ttgtgttctctcttcctttctctctcgctgttttctacttctgccttgtgtttataattgttccatacactttgttttggttgcttgattgttccttact 22707645  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
     |||||||||||||||||||||||||  |||| | |||||||||| |||||    
T  22707644 ccacacatcaaatttgttattggtgtggttttct-catcgaattcgcaaca 22707595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 3022434 - 3022559
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||    
T  3022434 ttgtgttctctcttcctttttctctcgttgttttctgcttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatcacttgct 3022533  T
Q  101 tcacacatcaaatttgttattggtgt 126  Q
     |||||||||| ||||||||| ||||    
T  3022534 ccacacatcaagtttgttatttgtgt 3022559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 22163015 - 22162892
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||| |||||| ||||||||||| ||||||| ||||||||||||||  ||||||    
T  22163015 ttgtgttctctcttcttttctctc--gttgttttctacttttggcttgtgcttataactgttccatacaatttgttttggttgcttgattatcccttgct 22162918  T
Q  101 tcacacatcaaatttgttattggtgt 126  Q
    |||||||||||| |||||||||||||    
T  22162917 tcacacatcaaaattgttattggtgt 22162892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 14837530 - 14837680
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||  ||||||    
T  14837530 ttgtgttctctcttcctttctctctcgctgttttatacttttggcttgtgtttataattgttctatacactttgttttggttgcttgattatcacttgct 14837629  T
Q  101 tcacacatcaaat-ttgttattggtgtaattttttccatcgaattcacaacag 152  Q
     |||||||||| | ||||||||| ||| |||| |  |||||||||||||||||    
T  14837630 ccacacatcaagtattgttattgatgtgatttct--catcgaattcacaacag 14837680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 42923502 - 42923374
Alignment:
Q  1 ttgtgttctctcttcttttctctctc--gttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttctt 97  Q
    ||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||| ||||||||||| ||| |||||||||||||| ||||    
T  42923502 ttgtgttctctcttcttttctctctctcgttgttttctacttttgacttgtgtttataattgtttcatacactttgtttttggttgcttgattatctctt 42923403  T
Q  98 gcttcacacatcaaatttgttattggtgt 126  Q
    ||| |||||||||| ||||||||||||||    
T  42923402 gctccacacatcaagtttgttattggtgt 42923374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 6258810 - 6258687
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||| |||||| |||||||  ||||||    
T  6258810 ttgtgttctctcttcctttctctctcgctgttttctacttttagcttgtgtttataattgttccagacactttgttttggttgcctgattatcacttgct 6258711  T
Q  101 tcacacatcaaatttgttattggt 124  Q
     |||||||||| ||||||||||||    
T  6258710 ccacacatcaagtttgttattggt 6258687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 15539522 - 15539398
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| | |||||||| || | ||||||    
T  15539522 ttgtgttctctcttcctttctctctcgttgttttctactttttgcttgtgtttataattgttcaatacactttgttttgattgcttga-taatccttgct 15539424  T
Q  101 tcacacatcaaatttgttattggtgt 126  Q
     |||||||||| ||||||||||||||    
T  15539423 ccacacatcaagtttgttattggtgt 15539398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 6264141 - 6263993
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||| ||||  |  ||||||    
T  6264141 ttgtgttctctcttcctttctctctcgttgttttctactttcggcttgtgttaataattgttccatacactttgttttggttgcctgatagtcacttgct 6264042  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
     |||||||||| ||||||||| ||||   ||||  ||||||||||||||||    
T  6264041 ccacacatcaagtttgttattagtgt--gttttctcatcgaattcacaaca 6263993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 22287329 - 22287181
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||| ||||||||||| |||||||||| |||| ||||| ||||||||||||||||||||| ||||| |||||||||| |||  ||||||    
T  22287329 ttgtgttctctcttcctttctctctcgctgttttctacgtttgacttgtttttataattgttccatacactatgttttggttgcttgactatcccttgct 22287230  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
     |||||||||| ||||||||||||||   ||||  ||||||||||||||||    
T  22287229 ccacacatcaagtttgttattggtgt--gttttctcatcgaattcacaaca 22287181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 22407447 - 22407348
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||    
T  22407447 ttgtgttctctcttcctttctctctcgatgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgactatctcttgct 22407348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 28459183 - 28459036
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||  |||||||| |  |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||  ||||||    
T  28459183 ttgtgttctctctttctttctctccc--tgttttctacttttggtttgtgtttataattgttccatacactttgttttggttgcttgattatcacttgct 28459086  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaacagg 153  Q
     |||||||||| | | |||||||||| |||||   ||||||||||||||||||    
T  28459085 ccacacatcaagtgttttattggtgtgatttt---catcgaattcacaacagg 28459036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 21520686 - 21520557
Alignment:
Q  1 ttgtgttctctcttcttttctctctcg---ttgttttctacttttggcttgtgtttataattgttccatacacttt-gtttcggttgcttgattatttct 96  Q
    ||||||||||||||| |||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||| |||||||  ||    
T  21520686 ttgtgttctctcttcgtttctctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttaattttggttgcctgattatcact 21520587  T
Q  97 tgcttcacacatcaaatttgttattggtgt 126  Q
    |||| |||||||||| ||||||||||||||    
T  21520586 tgctccacacatcaagtttgttattggtgt 21520557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 29 - 132
Target Start/End: Original strand, 38020370 - 38020473
Alignment:
Q  29 tgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaa 128  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||| || |||||||||||||||||||||| |    
T  38020370 tgttttctacttttagcttgtgattataattgttccatacactttgttttggttgcttgattattccttgctccatacatcaaatttgttattggtgtga 38020469  T
Q  129 tttt 132  Q
    ||||    
T  38020470 tttt 38020473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 43623573 - 43623423
Alignment:
Q  1 ttgtgttctctcttcttttctctctc-gttgttttctacttttggcttgtgtttataattgttccatacacttt-gtttcggttgcttgattatttcttg 98  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||| || ||||||||||||||||||||||  ||| |||||| ||||||| | |||    
T  43623573 ttgtgttctctcttcttttctctcgctgttgttttctacttttggcttatgattataattgttccatacactttaattttggttgcctgattatctattg 43623474  T
Q  99 cttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    || |||||||||| || ||||||||||| ||||||  |||||||||| |||||    
T  43623473 ctccacacatcaagttagttattggtgtgattttt--catcgaattcgcaaca 43623423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 7462940 - 7462819
Alignment:
Q  1 ttgtgttctctcttct-tttctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttg 98  Q
    |||||||||||||||| |||||||| | |||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||   |||    
T  7462940 ttgtgttctctcttctctttctctcgctgttgttttctacttttggcttgtgattataattgtttcatacactttgttttggttgcttgattatcctttg 7462841  T
Q  99 cttcacacatcaaatttgttat 120  Q
    || |||||||||| ||||||||    
T  7462840 ctccacacatcaagtttgttat 7462819  T

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Target: chr2; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 34979565 - 34979457
Alignment:
Q  18 ttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgt 117  Q
    |||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||| ||| |||||||| |||||| ||| || |||||||||| |||||    
T  34979565 ttctctctcgctgttttctacttttgacttatgtttataattgttccatacactttattttggttgctttattattccttactccacacatcaagtttgt 34979466  T
Q  118 tattggtgt 126  Q
    |||||||||    
T  34979465 tattggtgt 34979457  T

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Target: chr2; HSP #20
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 23871082 - 23871211
Alignment:
Q  5 gttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattg--ttccatacactttgtttcggttgcttgattatttcttgcttc 102  Q
    ||||||||||| |||||||| || ||||||||||||||| ||||||||||||||||  || |||||||||||||| ||||  || ||| || |||||| |    
T  23871082 gttctctcttcatttctctcccgctgttttctacttttgccttgtgtttataattgtttttcatacactttgttttggttatttaattgttccttgctcc 23871181  T
Q  103 acacatcaaatttgttattggtgtaatttt 132  Q
    ||||||||||||||||||||||||| ||||    
T  23871182 acacatcaaatttgttattggtgtagtttt 23871211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 5375339 - 5375218
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttct-acttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgc 99  Q
    ||||||||||||||||||||||||| | |||||| | ||||||| ||||| ||||||||||||||||||||||||||| | ||||||||||||  ||| |    
T  5375339 ttgtgttctctcttcttttctctcttgctgtttttttacttttgacttgtatttataattgttccatacactttgttttgattgcttgattatcccttac 5375240  T
Q  100 ttcacacatcaaatttgttatt 121  Q
    | |||||||||| |||||||||    
T  5375239 tccacacatcaagtttgttatt 5375218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 26 - 145
Target Start/End: Original strand, 27105091 - 27105206
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||  ||||  ||||||||||||||||||||| ||||||||||||||  |||||| |||||||||| |||||||||||||    
T  27105091 cgttgttttctacttttggcttgcattta--attgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagtttgttattggtg 27105188  T
Q  126 taattttttccatcgaattc 145  Q
    | ||||||  ||||||||||    
T  27105189 tgattttt--catcgaattc 27105206  T

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Target: chr2; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 13910006 - 13909884
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||||||||| ||||||||||||||  ||| || |||||||| || ||||||||||||    
T  13910006 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatcccttactccacacatc-aagttgttattggtg 13909910  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | | |||||| |||||| ||||||||    
T  13909909 tgactttttcgatcgaagtcacaaca 13909884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 131
Target Start/End: Complemental strand, 45279962 - 45279860
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||||||||| |||||||||||||| ||||||| |||||||| || ||||||||||||    
T  45279962 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatctcttgctccacacatc-aagttgttattggtg 45279866  T
Q  126 taattt 131  Q
    | ||||    
T  45279865 tgattt 45279860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 44289060 - 44288984
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgttt 77  Q
    ||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  44289060 ttgtgttctctcttcatttctctctcgctgttttctactgttggcttgtgtttataattgtttcatacactttgttt 44288984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 152
Target Start/End: Complemental strand, 24162184 - 24162062
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||  |||||| |||||||||| ||| |||||||||||||| |||| || |||||||| || ||||||||||||    
T  24162184 cgttgttttctacttttggcttgtattta--attgtttcatacacttttttttggttgcttgattatctctttctccacacatc-aagttgttattggtg 24162088  T
Q  126 taattttttccatcgaattcacaacag 152  Q
    | || |||| ||||| |||||||||||    
T  24162087 tgatatttt-catcgtattcacaacag 24162062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 36561101 - 36560981
Alignment:
Q  27 gttgttttctactttt-ggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||| |||| || ||||  |||||||||||| |||||||| ||||||||||||||| |||||| |||||||| || ||||||||||||    
T  36561101 gttgttttctactttttggctcgtattta--attgttccatacgctttgttttggttgcttgattattccttgctccacacatc-aagttgttattggtg 36561005  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | ||||||  ||||||||||||||||    
T  36561004 tgattttt--catcgaattcacaaca 36560981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 151
Target Start/End: Complemental strand, 31732754 - 31732631
Alignment:
Q  21 tctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttat 120  Q
    ||||||| |||||||||||||||| ||||| |||||| |  |||||||||| ||||| ||||||||||||||  ||||||||||||||||||    ||||    
T  31732754 tctctcgctgttttctacttttggtttgtgattataact--tccatacactctgttttggttgcttgattataacttgcttcacacatcaaa----ttat 31732661  T
Q  121 tggtgtaattttttccatcgaattcacaaca 151  Q
    | |||| ||||||| ||||||||||||||||    
T  31732660 tcgtgtgatttttt-catcgaattcacaaca 31732631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 151
Target Start/End: Complemental strand, 11578082 - 11577957
Alignment:
Q  21 tctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttat 120  Q
    |||||||||||||||||||||||||||||||||| |    ||||||| ||||| ||| ||||||||||||||| |||| | |||||||||| ||| ||||    
T  11578082 tctctcgttgttttctacttttggcttgtgtttaaa---cttccatatactttattttggttgcttgattattacttgttccacacatcaagttt-ttat 11577987  T
Q  121 tggtgtaattttttccatcgaattcacaaca 151  Q
    |  ||| ||||||| ||||||||||||||||    
T  11577986 taatgtgatttttt-catcgaattcacaaca 11577957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 151
Target Start/End: Complemental strand, 38414156 - 38414028
Alignment:
Q  20 ctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgtta 119  Q
    |||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||  ||||| | |||||  | |||| |||||| ||| ||||||     
T  38414156 ctctctcgttgttttctacttttaccttgtgtttataattattccatacactttgttttcgttgcctaattatcacgtgctccacacaccaattttgtt- 38414058  T
Q  120 ttggtgtaattttttccatcgaattcacaaca 151  Q
    ||||||| ||||||  ||| ||||||||||||    
T  38414057 ttggtgtgattttt--catggaattcacaaca 38414028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 151
Target Start/End: Original strand, 20592368 - 20592484
Alignment:
Q  31 ttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 130  Q
    ||||||||||||| |||||| |||||| |  |||||||||||||||| ||||||||||||||| ||||||  ||||||||  | | |||||||||| |||    
T  20592368 ttttctacttttg-cttgtgattataact--tccatacactttgttttggttgcttgattattacttgctctacacatcacgtattttattggtgtgatt 20592464  T
Q  131 ttttccatcgaattcacaaca 151  Q
    |||| ||||||||||||||||    
T  20592465 tttt-catcgaattcacaaca 20592484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 17848702 - 17848811
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgc 99  Q
    |||||||||||||||||||||||| |  |||||||||||||| | ||| ||||||||||||| ||||||||  | ||| ||||||||||||||  |||||    
T  17848702 ttgtgttctctcttcttttctctcgc--tgttttctactttttgtttgcgtttataattgtttcatacactgcgattttggttgcttgattatcacttgc 17848799  T
Q  100 ttcacacatcaa 111  Q
    | ||||||||||    
T  17848800 tccacacatcaa 17848811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 26 - 132
Target Start/End: Complemental strand, 23452198 - 23452094
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggt 124  Q
    ||||||||||||||||| |||||| ||||  |||||||||||||||||| ||| ||||||||||||||  |||||| |||||||| || |||||||||||    
T  23452198 cgttgttttctacttttagcttgtattta--attgttccatacactttgattttggttgcttgattatcccttgctccacacatc-aagttgttattggt 23452102  T
Q  125 gtaatttt 132  Q
    || |||||    
T  23452101 gtgatttt 23452094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 26 - 133
Target Start/End: Complemental strand, 35217930 - 35217826
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||| ||||| ||  ||||| |||||||| |||||||| |||||||| ||||| ||||||| |||||||| || ||||||||||||    
T  35217930 cgttgttttctacttttgacttgtatt--taattattccatacgctttgttttggttgcttaattatctcttgctccacacatc-aagttgttattggtg 35217834  T
Q  126 taattttt 133  Q
    | ||||||    
T  35217833 tgattttt 35217826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 36558841 - 36558721
Alignment:
Q  27 gttgttttctactttt-ggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||| |||| || ||||  |||||||||||| |||||||| ||||||||||||||  |||||| |||||||| || || |||||||||    
T  36558841 gttgttttctactttttggctcgtattta--attgttccatacgctttgttttggttgcttgattatcccttgctccacacatc-aagttattattggtg 36558745  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | ||||||  ||||||||||||||||    
T  36558744 tgattttt--catcgaattcacaaca 36558721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 38 - 151
Target Start/End: Complemental strand, 11739532 - 11739421
Alignment:
Q  38 cttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttcca 137  Q
    |||||| ||||| |||||||||||| ||||||||||||||   || ||||| |||  ||||||  ||||||||| |||||||||||||| ||||||  ||    
T  11739532 cttttgacttgtatttataattgtttcatacactttgtttttatttcttgactatcccttgctctacacatcaagtttgttattggtgtgattttt--ca 11739435  T
Q  138 tcgaattcacaaca 151  Q
    ||||||||||||||    
T  11739434 tcgaattcacaaca 11739421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 33 - 151
Target Start/End: Complemental strand, 19504291 - 19504178
Alignment:
Q  33 ttctacttttggcttgtgtttataattgttccatacactttgtttc-ggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattt 131  Q
    ||||||||||||||||| ||||||| |  ||||||||||||||||  ||||||||||||||  |||||| |||||||| || ||||||||||||| ||||    
T  19504291 ttctacttttggcttgtatttataact--tccatacactttgtttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgattt 19504195  T
Q  132 tttccatcgaattcacaaca 151  Q
    |   ||||||||||||||||    
T  19504194 t---catcgaattcacaaca 19504178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 55 - 151
Target Start/End: Original strand, 42453798 - 42453890
Alignment:
Q  55 taattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    ||||||||||||||| ||| ||| |||||||||||||| ||||||| |||||||| || ||||||||||||| |||||   ||||||||||||||||    
T  42453798 taattgttccatacattttattttggttgcttgattatctcttgctccacacatc-aagttgttattggtgtgatttt---catcgaattcacaaca 42453890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 45238990 - 45238842
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgtt-ccatacactttg-tttcggttgcttgattatttcttg 98  Q
    |||||||||||||||||||||||| |  |||||||||||||||||||||| |||||| ||||   || ||||| | ||| |||||||||| |||  ||||    
T  45238990 ttgtgttctctcttcttttctctcgc--tgttttctacttttggcttgtgattataactgttgatatccacttcgattttggttgcttgactatcgcttg 45238893  T
Q  99 cttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
     | |||||||||| ||| |||||||||| ||||||  |||||||||| |||||    
T  45238892 gtccacacatcaagtttattattggtgtgattttt--catcgaattcgcaaca 45238842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 151
Target Start/End: Complemental strand, 19501958 - 19501843
Alignment:
Q  31 ttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 129  Q
    ||||||||||||||||||| |||||||   |||||||||||||| ||| ||||||||||||||  |||||| |||||||| || ||||||||||||| ||    
T  19501958 ttttctacttttggcttgtatttataa--cttccatacactttgtttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgat 19501862  T
Q  130 tttttccatcgaattcacaaca 151  Q
    |||   |||||||||| |||||    
T  19501861 ttt---catcgaattcgcaaca 19501843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 61 - 151
Target Start/End: Original strand, 22874431 - 22874519
Alignment:
Q  61 ttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    |||||||||||||||||  ||||||||| |||  |||||| |||||||||| ||| |||||||||| ||||||  ||||||||||||||||    
T  22874431 ttccatacactttgttttagttgcttgactatcacttgctccacacatcaagtttattattggtgtgattttt--catcgaattcacaaca 22874519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 133
Target Start/End: Complemental strand, 17897221 - 17897114
Alignment:
Q  21 tctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttat 120  Q
    |||||||||||||||||||||| |||||||||||||| |||  |||  ||||||||| |||||||||||||||  ||||| |||||||||| | | ||||    
T  17897221 tctctcgttgttttctactttt-gcttgtgtttataactgt--catcaactttgttttggttgcttgattatt--ttgctccacacatcaagtattttat 17897127  T
Q  121 tggtgtaattttt 133  Q
    || |||| |||||    
T  17897126 tgatgtatttttt 17897114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 111
Target Start/End: Original strand, 42064792 - 42064875
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaa 111  Q
    ||||||||||||||||| |||||| ||||  |||||||||||||||||||||  |||||||||| ||  |||||| ||||||||||    
T  42064792 cgttgttttctactttttgcttgtattta--attgttccatacactttgttttagttgcttgatcatcccttgctccacacatcaa 42064875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 45332141 - 45332020
Alignment:
Q  26 cgttgttttctactttt-ggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggt 124  Q
    ||||||||||||||||| ||||||| ||||  |||||| || || |||||||| |||||||| |||||  |||| | |||||||||| || |||||||||    
T  45332141 cgttgttttctactttttggcttgtattta--attgttacaaacgctttgttttggttgcttaattatcccttgttccacacatcaagtt-gttattggt 45332045  T
Q  125 gtaattttttccatcgaattcacaaca 151  Q
    || ||||||  ||||||||||||||||    
T  45332044 gtgattttt--catcgaattcacaaca 45332020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 40032046 - 40031969
Alignment:
Q  1 ttgtgttctctcttc-ttttctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttgttt 77  Q
    |||| |||||||||| ||||||||| | |||||||||||| |||| ||||||||||||||||||||||| |||||||||    
T  40032046 ttgtattctctcttccttttctctcgctgttgttttctacatttg-cttgtgtttataattgttccatatactttgttt 40031969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 133
Target Start/End: Complemental strand, 35215553 - 35215449
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||| ||||| ||  ||||| || ||||  |||||||| |||||||| |||||  |||||| |||||||| || ||||||||||||    
T  35215553 cgttgttttctacttttgacttgtatt--taattatttcatatgctttgttttggttgcttaattatcccttgctccacacatc-aagttgttattggtg 35215457  T
Q  126 taattttt 133  Q
    | ||||||    
T  35215456 tgattttt 35215449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 20146582 - 20146540
Alignment:
Q  21 tctctcgttgttttctacttttggcttgtgtttataattgttcc 64  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  20146582 tctctcgttgttttctactttt-gcttgtgtttataattgttcc 20146540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 109; Significance: 7e-55; HSPs: 72)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 4 - 151
Target Start/End: Complemental strand, 41585725 - 41585580
Alignment:
Q  4 tgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttca 103  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||  ||    
T  41585725 tgttctatcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatctcttgcccca 41585626  T
Q  104 cacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    |||||||| |||||||||||||| ||||||  ||||||||||||||||    
T  41585625 cacatcaagtttgttattggtgtgattttt--catcgaattcacaaca 41585580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 9 - 150
Target Start/End: Complemental strand, 12555898 - 12555757
Alignment:
Q  9 tctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacat 108  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||| ||||||||||||||| |||||| |||||||    
T  12555898 tctcttcttttctctctcgttgttttctacttttggcttgtgattataattgtttcatacactttattttggttgcttgattattccttgctccacacat 12555799  T
Q  109 caaatttgttattggtgtaattttttccatcgaattcacaac 150  Q
    |||||||||||||||||| | ||||  |||||||||||||||    
T  12555798 caaatttgttattggtgtgagttttctcatcgaattcacaac 12555757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 31465982 - 31465849
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgc 99  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||| ||||     
T  31465982 ttgtattctctcttcttttctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcttaattattccttgt 31465883  T
Q  100 ttcacacatcaaatttgttattggtgtaattttt 133  Q
    | ||||||||||||||||||||||||| ||||||    
T  31465882 tccacacatcaaatttgttattggtgtgattttt 31465849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 2724179 - 2724313
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||| ||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||    
T  2724179 ttgtgttctctcttcctttttctttcgctgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatcccttgct 2724278  T
Q  101 tcacacatcaaatttgttattggtgtaattttttc 135  Q
      ||||||||| |||||||||||||| ||||||||    
T  2724279 atacacatcaagtttgttattggtgtgattttttc 2724313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 4 - 151
Target Start/End: Complemental strand, 26098278 - 26098129
Alignment:
Q  4 tgttctctcttcttttctctctc--gttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgctt 101  Q
    |||||||||||| ||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||     
T  26098278 tgttctctcttcctttctctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattattccttgctc 26098179  T
Q  102 cacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    |||||||||| |||| ||||||||| | ||||  |||||||||| |||||    
T  26098178 cacacatcaagtttgatattggtgtgagttttctcatcgaattcgcaaca 26098129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 17818485 - 17818338
Alignment:
Q  1 ttgtgttctctcttcttttctctctc--gttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttg 98  Q
    ||||||||||| ||| ||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  17818485 ttgtgttctcttttcctttctctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattattccttg 17818386  T
Q  99 cttcacacatcaaatttgttattggtgtaattttttccatcgaattcac 147  Q
    || |||||||||| ||||||||||||||  |||| | ||||||||||||    
T  17818385 ctccacacatcaagtttgttattggtgtggttttct-catcgaattcac 17818338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 10474316 - 10474168
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||| ||||||||||| |  ||||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||    
T  10474316 ttgtgttctctcttcctttctctctcgctaatttctacttttcgcttgtgtttataattgttccatacactttgttttggttacttgattattccttgct 10474217  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
     |||||||||| ||| |||||| ||||||||||  |||||||| |||||||    
T  10474216 ccacacatcaagtttattattgatgtaattttt--catcgaatacacaaca 10474168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 5 - 151
Target Start/End: Complemental strand, 37705771 - 37705626
Alignment:
Q  5 gttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcac 104  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||| ||||||| ||||||||| ||||||||| ||||| |||||| |||    
T  37705771 gttctctcttcctttctctctcgctgttttctacttttggcttgtgtttttaattattccatatactttgttttggttgcttggttattccttgctccac 37705672  T
Q  105 acatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    ||||||| ||||||||||||||  |||| | ||||||||||||||||    
T  37705671 acatcaagtttgttattggtgtggttttct-catcgaattcacaaca 37705626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 1189600 - 1189475
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||| ||||||    
T  1189600 ttgtgttctctcttcctttctctctcgcagttttctacttttggcttgtgtttataattgttccatacattttgttttggtggcttgattattccttgct 1189501  T
Q  101 tcacacatcaaatttgttattggtgt 126  Q
     |||||||||| |||| |||||||||    
T  1189500 ccacacatcaagtttgatattggtgt 1189475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 658349 - 658203
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    |||||||||||||||||||||||  |  ||||||||||||||||||| ||||||| |||||||| |||||||||||| |||||| |||||||| ||||||    
T  658349 ttgtgttctctcttcttttctcttgc--tgttttctacttttggcttatgtttattattgttccgtacactttgttttggttgcctgattattccttgct 658252  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaacag 152  Q
     ||||||||||||||||||||||||| |||||   |||||||||| ||||||    
T  658251 ccacacatcaaatttgttattggtgtgatttt---catcgaattcgcaacag 658203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 6756778 - 6756904
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| | |||| |||||||  ||||||    
T  6756778 ttgtgttctctcttcttttctctctcgctgttttctacttttggcttgtgtttataattgtttcatacactttgttttgattgcctgattatcacttgct 6756877  T
Q  101 tcacacatcaa-atttgttattggtgt 126  Q
     ||||||||||  ||||||||||||||    
T  6756878 ccacacatcaagttttgttattggtgt 6756904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 21 - 124
Target Start/End: Original strand, 20045292 - 20045395
Alignment:
Q  21 tctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttat 120  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||   |||||||||||||||| ||||||||    
T  20045292 tctctcgttgttttttacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatcatttgcttcacacatcaagtttgttat 20045391  T
Q  121 tggt 124  Q
    ||||    
T  20045392 tggt 20045395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 40221833 - 40221947
Alignment:
Q  19 tctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgtt 118  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||   ||||| |||||||||| ||||||    
T  40221833 tctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgactatcctttgctccacacatcaagtttgtt 40221932  T
Q  119 attggtgtaattttt 133  Q
    |||||||| ||||||    
T  40221933 attggtgtgattttt 40221947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 18511205 - 18511056
Alignment:
Q  1 ttgtgttctctcttcttttctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgc 99  Q
    |||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| ||||||||||||||  ||||||||| |||  |||||    
T  18511205 ttgtgttctctcttcttttctctcgctgttgttttctactttttgcttgtgtttataattgtttcatacactttgttttagttgcttgactatcccttgc 18511106  T
Q  100 ttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    | |||||||||| |||||||||| ||| |||| |  |||||||||| |||||    
T  18511105 tccacacatcaagtttgttattgatgtgatttat--catcgaattcgcaaca 18511056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 20505836 - 20505710
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttg---tttcggttgcttgattatttctt 97  Q
    |||||||||||||| |||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||   ||| |||||| |||||||| |||    
T  20505836 ttgtgttctctcttattttctctc--gttgttttctagttttggcttgtgtttataattgttccatacactttgattttttggttgcctgattattactt 20505739  T
Q  98 gcttcacacatcaaatttgttattggtgt 126  Q
    ||| |||||||||| ||||||||||||||    
T  20505738 gctccacacatcaagtttgttattggtgt 20505710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 21 - 151
Target Start/End: Original strand, 36208879 - 36209007
Alignment:
Q  21 tctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttat 120  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||  ||||||  ||||||||| ||| ||||    
T  36208879 tctctcgttgttttctacttttggcttgtgattataattgttctatacactttgttttggttgcttgattatcacttgctctacacatcaagtttattat 36208978  T
Q  121 tggtgtaattttttccatcgaattcacaaca 151  Q
    || ||| ||||||  ||||||||||||||||    
T  36208979 tgatgtgattttt--catcgaattcacaaca 36209007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 26098017 - 26098127
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||| ||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||  ||||||    
T  26098017 ttgtgttctctcttcctttctatctcgctgttttctacttttggctagtgtttataattgttccatacactttgttttggttgcttgactatcccttgct 26098116  T
Q  101 tcacacatcaa 111  Q
     ||||||||||    
T  26098117 ccacacatcaa 26098127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 36402321 - 36402170
Alignment:
Q  1 ttgtgttctctcttctttt-ctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttctt 97  Q
    ||||||||||||||||||| ||||| | |||||||||||||||| |||||||||||||||||||| |||||||||| ||| |||||| |||||||  |||    
T  36402321 ttgtgttctctcttctttttctctcgctgttgttttctacttttagcttgtgtttataattgttctatacactttgattttggttgcctgattatccctt 36402222  T
Q  98 gcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    ||| |||||||||| |||||||||||||| ||||||  |||||||||| |||||    
T  36402221 gctccacacatcaagtttgttattggtgtgattttt--catcgaattcgcaaca 36402170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 21 - 145
Target Start/End: Original strand, 21289065 - 21289187
Alignment:
Q  21 tctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttat 120  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||| |||  |||||| |||||||||| |||| |||    
T  21289065 tctctcgttgttttctacttttggcttgtgtttattattcttccatacactttgttttggttgcttgactatcccttgctccacacatcaagtttgatat 21289164  T
Q  121 tggtgtaattttttccatcgaattc 145  Q
    |||||| ||||||  ||||||||||    
T  21289165 tggtgtgattttt--catcgaattc 21289187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 6747590 - 6747720
Alignment:
Q  1 ttgtgttctct-cttcttttctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttg---tttcggttgcttgattatttc 95  Q
    ||||||||||| ||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||   ||| |||||||||||||| ||    
T  6747590 ttgtgttctcttcttcttttctctcgctgttgttttcgacttttggcttgtgtttataattgttccatacactttgtgtttttggttgcttgattatctc 6747689  T
Q  96 ttgcttcacacatcaaatttgttattggtgt 126  Q
    |||||  ||||||||| ||||||||||||||    
T  6747690 ttgctctacacatcaagtttgttattggtgt 6747720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 16092192 - 16092069
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||| ||||||||| |||||||||| |||   |||||    
T  16092192 ttgtgttctctcttcttttctctctcgctgttttctacttttggcttgcgtttacaattgttccatatactttgttt-ggttgcttgactatccattgct 16092094  T
Q  101 tcacacatcaaatttgttattggtg 125  Q
     |||| ||||| |||||||||||||    
T  16092093 ccacatatcaagtttgttattggtg 16092069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 2954702 - 2954826
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgttt-ataattgttccatacactttgtttcggttgcttgattatttcttgc 99  Q
    |||||||||||||||||||||||| |  ||||||||||||||||||||||||  |||||||||||||||||||||||| |||||  |||||||  ||| |    
T  2954702 ttgtgttctctcttcttttctctcgc--tgttttctacttttggcttgtgttacataattgttccatacactttgttttggttgtctgattatcacttac 2954799  T
Q  100 ttcacacatcaaatttgttattggtgt 126  Q
    | |||||||||||||||||||||||||    
T  2954800 tccacacatcaaatttgttattggtgt 2954826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 25904389 - 25904508
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||   |||||||| |||  |||||     
T  25904389 ttgtgttctctcttcctttctctctcgctgttttctacttttggtttgtgtttataattgttccatacactttgttttcattgcttgactatcccttgca 25904488  T
Q  101 tcacacatcaaatttgttat 120  Q
     |||||||||||||| ||||    
T  25904489 ccacacatcaaatttattat 25904508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 29 - 151
Target Start/End: Complemental strand, 34530679 - 34530559
Alignment:
Q  29 tgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaa 128  Q
    |||| |||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||  ||||||  ||||||||| |||||||||||||| |    
T  34530679 tgttgtctacttttgacttgtgtttataattgttccatacgctttgttttggttgcttgattatcacttgctcgacacatcaagtttgttattggtgtga 34530580  T
Q  129 ttttttccatcgaattcacaaca 151  Q
    |||||  ||||||||||||||||    
T  34530579 ttttt--catcgaattcacaaca 34530559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 18509311 - 18509201
Alignment:
Q  1 ttgtgttctctcttcttttctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgc 99  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||| |||  |||||    
T  18509311 ttgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgtttgactatcccttgc 18509212  T
Q  100 ttcacacatca 110  Q
    | |||||||||    
T  18509211 tccacacatca 18509201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 17073199 - 17073321
Alignment:
Q  27 gttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 126  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||  |||||||||| ||  |||||| |||||||||||||| ||||||||||    
T  17073199 gttgttttctacttttgacttgtgtttataattgttccatacactttgttttagttgcttgatcatcacttgctccacacatcaaatttattattggtgt 17073298  T
Q  127 aattttttccatcgaattcacaaca 151  Q
    |  ||||   |||||||||||||||    
T  17073299 a--ttttcggatcgaattcacaaca 17073321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 2818328 - 2818200
Alignment:
Q  1 ttgtgttctctcttctttt-ctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttctt 97  Q
    ||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||| |||||||  |||    
T  2818328 ttgtgttctctcttctttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggatgcctgattatccctt 2818229  T
Q  98 gcttcacacatcaaatttgttattggtgt 126  Q
    ||| || ||||||| ||||||||||||||    
T  2818228 gctccatacatcaagtttgttattggtgt 2818200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 4236946 - 4237065
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||||||||| |||||||||||||| |||||||||||||||| || ||||||||||||    
T  4236946 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatctcttgcttcacacatc-aagttgttattggtg 4237042  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | |||||   || |||||||||||||    
T  4237043 tgatttt---caacgaattcacaaca 4237065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 24127142 - 24127291
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgc 99  Q
    ||||||||||||||  ||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||| |||  ||||  |||||||  |||||    
T  24127142 ttgtgttctctctttctttctctctcgttgttttctacttttgacttatgtttataattgtttcatacactttgttttttgttgtctgattatcccttgc 24127241  T
Q  100 ttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    | ||||||| || ||||||||| |||| ||||||  ||||||||||||||||    
T  24127242 tccacacattaagtttgttatttgtgtgattttt--catcgaattcacaaca 24127291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 18469327 - 18469448
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||||| |  |||||||||||||||| ||||||||||||||  |||||| |||||||||| ||||||||||||     
T  18469327 cgttgttttctacttttggcttgtatttataact--tccatacactttgttttggttgcttgattatcccttgctccacacatcaagtttgttattggta 18469424  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | ||||||  ||||||||||||||||    
T  18469425 tgattttt--catcgaattcacaaca 18469448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 20043276 - 20043397
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttga-ttatttcttgc 99  Q
    ||||||||||||||  ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||  |||||    
T  20043276 ttgtgttctctctttcttt-tctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgttttggctgcttgatttatcacttgc 20043374  T
Q  100 ttcacacatcaaatttgttattg 122  Q
    | |||| ||||| ||||||||||    
T  20043375 tccacaaatcaagtttgttattg 20043397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 21948336 - 21948445
Alignment:
Q  19 tctctctcgttgttttctacttttggcttgtgtttataattgttccatacactt--tgtttcggttgcttgattatttcttgcttcacacatcaaatttg 116  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||||||||  | ||| ||||||||||||||  |||||| |||||||||| ||||    
T  21948336 tctctctcgctattttctacttttggcttgtgtttataattgttccatacactttattttttggttgcttgattatcccttgctccacacatcaagtttg 21948435  T
Q  117 ttattggtgt 126  Q
    ||||||||||    
T  21948436 ttattggtgt 21948445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 26 - 152
Target Start/End: Original strand, 38882406 - 38882526
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||||||||| |||||||||||||| ||||||| |||||||| || ||||||||||||    
T  38882406 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatctcttgctccacacatc-aagttgttattggtg 38882502  T
Q  126 taattttttccatcgaattcacaacag 152  Q
    | |||||   |||||||||| ||||||    
T  38882503 tgatttt---catcgaattcgcaacag 38882526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 6745354 - 6745484
Alignment:
Q  1 ttgtgttctctc-ttcttttctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttg---tttcggttgcttgattatttc 95  Q
    |||||||||||  |||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||   ||| || ||||||| ||| ||    
T  6745354 ttgtgttctcttattcttttctctcgctgttgttttcgacttttggcttgtgtttataattgttccatacactttgtttttttggctgcttgactatctc 6745453  T
Q  96 ttgcttcacacatcaaatttgttattggtgt 126  Q
    ||||| |||||||||| ||||||||||||||    
T  6745454 ttgctccacacatcaagtttgttattggtgt 6745484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 18467002 - 18467123
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||||| |  |||||||||||||||| | ||||||||||||  |||||| |||||||||| ||||||||| |||    
T  18467002 cgttgttttctacttttggcttgtatttataact--tccatacactttgttttgattgcttgattatcccttgctccacacatcaagtttgttattagtg 18467099  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | ||||||  ||||||||||||||||    
T  18467100 tgattttt--catcgaattcacaaca 18467123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 2175219 - 2175341
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||  |||||| |||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||    
T  2175219 cgttgttttctacttttggcttgtattta--attgtttcatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtg 2175315  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | | |||||  |||||||||||||||    
T  2175316 tgacttttttgatcgaattcacaaca 2175341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 133
Target Start/End: Original strand, 16776473 - 16776578
Alignment:
Q  27 gttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 126  Q
    ||||||||||||||||||||||| || ||||||||| |||||||||||||| | |||| |||||||| |||||| |||||||||| ||||||||||||||    
T  16776473 gttgttttctacttttggcttgtatt-ataattgtttcatacactttgttttgattgcctgattattccttgctccacacatcaagtttgttattggtgt 16776571  T
Q  127 aattttt 133  Q
     ||||||    
T  16776572 gattttt 16776578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 135
Target Start/End: Original strand, 25804342 - 25804448
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||||||||| |||||||||||||| ||||||| |||||||| || ||||||||||||    
T  25804342 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatctcttgctccacacatc-aagttgttattggtg 25804438  T
Q  126 taattttttc 135  Q
    | || |||||    
T  25804439 tgatattttc 25804448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 39854769 - 39854922
Alignment:
Q  1 ttgtgttctctcttcttttctctctcg---ttgttttctacttttggcttgtgtttataattgttccatacacttt-gtttcggttgcttgattatttct 96  Q
    ||||||||||||||| ||| |||||||   ||||||| ||||||||||||||||||||||||||||||||||||||  ||| |||||||| | |||  ||    
T  39854769 ttgtgttctctcttcctttttctctcgctgttgttttttacttttggcttgtgtttataattgttccatacactttatttttggttgcttaactatccct 39854868  T
Q  97 tgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaacag 152  Q
    |||| |||| ||||| ||| |||||||||| ||||||  |||||||||| ||||||    
T  39854869 tgctccacatatcaagtttattattggtgtgattttt--catcgaattcgcaacag 39854922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 150
Target Start/End: Complemental strand, 6661161 - 6661038
Alignment:
Q  21 tctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttat 120  Q
    ||||||||||||||||||||||| ||||||||||||| |  |||||||||||| ||| ||||||||||||||| |||||| |||||||||||| | | ||    
T  6661161 tctctcgttgttttctacttttg-cttgtgtttataact--tccatacactttattttggttgcttgattattacttgctccacacatcaaatatttaat 6661065  T
Q  121 tggtgtaattttttccatcgaattcacaac 150  Q
    |||||| |||||   |||||||||||||||    
T  6661064 tggtgtgatttt---catcgaattcacaac 6661038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 10587133 - 10587252
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||| ||||| ||||||| |  |||||||||||||||| ||||||||||||| | |||||| |||||||||| |||||||||||||    
T  10587133 cgttgttttctacttttgacttgtatttataact--tccatacactttgttttggttgcttgatta-tccttgctccacacatcaagtttgttattggtg 10587229  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | |||||   ||||||||||||||||    
T  10587230 tgatttt---catcgaattcacaaca 10587252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 133
Target Start/End: Original strand, 18596951 - 18597063
Alignment:
Q  21 tctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttat 120  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||| || ||  |||||||  |||||| || ||||||| ||||||||    
T  18596951 tctctcgctgttttctacttttgacttgtgtttataattgttccatacactttattttggatgtctgattatcacttgctccatacatcaagtttgttat 18597050  T
Q  121 tggtgtaattttt 133  Q
    |||||| ||||||    
T  18597051 tggtgtgattttt 18597063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 10529059 - 10528937
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggt 124  Q
    |||||||||||||||||||||||| ||  |||||||||||||||||||| ||| |||||| |||||||  ||||||||||||||| || |||||||||||    
T  10529059 cgttgttttctacttttggcttgtatt--taattgttccatacactttgattttggttgcctgattatcccttgcttcacacatc-aagttgttattggt 10528963  T
Q  125 gtaattttttccatcgaattcacaaca 151  Q
    || ||||| | ||||||||||||||||    
T  10528962 gtgattttct-catcgaattcacaaca 10528937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 27910751 - 27910872
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    ||||||||| ||||||| |||||| ||||||| |  |||||||||||| ||| ||||| ||||||||  |||||| ||||||||||||||||||||||||    
T  27910751 cgttgttttatacttttagcttgtatttataact--tccatacactttattttggttgattgattatcccttgctccacacatcaaatttgttattggtg 27910848  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | ||||||  ||||||||||||||||    
T  27910849 tgattttt--catcgaattcacaaca 27910872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 39798348 - 39798468
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||||| | |  |||||||||||||| ||||||||||||||  |||||| ||||||||||| ||||||||||||    
T  39798348 cgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaaa-ttgttattggtg 39798444  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | ||||||  |||||||||| |||||    
T  39798445 tgattttt--catcgaattcgcaaca 39798468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 696164 - 696310
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcgg-ttgcttgattatttcttgc 99  Q
    ||||||||||||||  |||||||   |||||||||||||||||  |||||||||||| ||||||||||||||| ||| || || ||||||||| ||||||    
T  696164 ttgtgttctctctttctttctct---gttgttttctacttttgt-ttgtgtttataactgttccatacactttattttggttttcttgattatctcttgc 696259  T
Q  100 ttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    | |||||||||| | |||||||||| | ||||| | ||||||||||||||||    
T  696260 tccacacatcaagtctgttattggtatgattttct-catcgaattcacaaca 696310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 149
Target Start/End: Original strand, 27912854 - 27912973
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    ||||||||||||||||| |||||| ||||||| |  |||||||||||||||| ||||||||||||||  ||| || |||||||||| |||||||||||||    
T  27912854 cgttgttttctacttttagcttgtatttataact--tccatacactttgttttggttgcttgattatcccttactccacacatcaagtttgttattggtg 27912951  T
Q  126 taattttttccatcgaattcacaa 149  Q
      ||||||  ||||||||||||||    
T  27912952 ggattttt--catcgaattcacaa 27912973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 152
Target Start/End: Complemental strand, 38960093 - 38959971
Alignment:
Q  25 tcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggt 124  Q
    ||||||||||||||||||||||||| ||||||| | |  |||||||||||||| ||||||||||||||  |||||| |||||||| || |||||||||||    
T  38960093 tcgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggt 38959997  T
Q  125 gtaattttttccatcgaattcacaacag 152  Q
    || ||||||  |||||||||| ||||||    
T  38959996 gtgattttt--catcgaattcgcaacag 38959971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 26 - 152
Target Start/End: Complemental strand, 21684413 - 21684293
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||| | ||||  ||||||||||||||||||||| | ||||||||||||  |||||| |||||||| || ||||||||||||    
T  21684413 cgttgttttctacttttggcttttattta--attgttccatacactttgttttgattgcttgattatcccttgctccacacatc-aagttgttattggtg 21684317  T
Q  126 taattttttccatcgaattcacaacag 152  Q
    | |||||   |||||||||| ||||||    
T  21684316 tgatttt---catcgaattcgcaacag 21684293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 26 - 126
Target Start/End: Complemental strand, 25921434 - 25921337
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||||| ||| ||||||||||||||  |||||| |||||||| || ||||||||||||    
T  25921434 cgttgttttctacttttggcttgtattta--attgttccatacactttattttggttgcttgattatcccttgctccacacatc-aagttgttattggtg 25921338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 34477014 - 34476894
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggt 124  Q
    |||||||||||||||||||||||| ||  |||||||||||||||||||| ||| ||||||||||||||  |||||| |||||||| || |||||||||||    
T  34477014 cgttgttttctacttttggcttgtatt--taattgttccatacactttgattttggttgcttgattatcccttgctccacacatc-aagttgttattggt 34476918  T
Q  125 gtaattttttccatcgaattcacaaca 151  Q
    || |||||   |||||||||| |||||    
T  34476917 gtgatttt---catcgaattcgcaaca 34476894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 3373098 - 3372977
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggt 124  Q
    |||||||||||||||||||||||| ||  |||||||||||||| ||||| ||| |||||||| |||||  |||||| |||||||| || |||||||||||    
T  3373098 cgttgttttctacttttggcttgtatt--taattgttccatacgctttgattttggttgcttaattatcccttgctccacacatc-aagttgttattggt 3373002  T
Q  125 gtaattttttccatcgaattcacaaca 151  Q
    || ||||||  ||||||||||||||||    
T  3373001 gtgattttt--catcgaattcacaaca 3372977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 151
Target Start/End: Complemental strand, 31179326 - 31179213
Alignment:
Q  33 ttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatttt 132  Q
    ||||||||||||||||||||||  ||| ||||||||||||||||| |||||||| |||||  |||||| || ||||| || ||||||||||||| |||||    
T  31179326 ttctacttttggcttgtgttta--attattccatacactttgttttggttgcttaattatcccttgctccatacatc-aagttgttattggtgtgatttt 31179230  T
Q  133 ttccatcgaattcacaaca 151  Q
    |  ||||||||||||||||    
T  31179229 t--catcgaattcacaaca 31179213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 20054123 - 20054267
Alignment:
Q  1 ttgtgttctctctt-cttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgc 99  Q
    |||||||||||||| |||||||||||  | ||||||||||||||  |||||||||||| | |  |||||||||||||| ||||||||||||||| |||||    
T  20054123 ttgtgttctctctttcttttctctct--tcgttttctacttttgt-ttgtgtttataacttt--catacactttgttttggttgcttgattattacttgc 20054217  T
Q  100 ttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaacag 152  Q
    |  ||||||||| | | ||||| |||| ||||||   ||||||||||||||||    
T  20054218 tctacacatcaagtattttattagtgtgattttt---atcgaattcacaacag 20054267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 26 - 132
Target Start/End: Complemental strand, 34479379 - 34479275
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggt 124  Q
    |||||||||||||||||||||||  ||  |||||||||||||||||||| ||| ||||||||||||||  |||||| |||||||| || |||||||||||    
T  34479379 cgttgttttctacttttggcttgcatt--taattgttccatacactttgattttggttgcttgattatcccttgctccacacatc-aagttgttattggt 34479283  T
Q  125 gtaatttt 132  Q
    || |||||    
T  34479282 gtgatttt 34479275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 10750017 - 10750137
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggt 124  Q
    |||||||||||||||||||||||| ||  |||||||||||||| ||||| ||| |||||||| |||||  |||||| |||||||| || |||||||||||    
T  10750017 cgttgttttctacttttggcttgtatt--taattgttccatacgctttgattttggttgcttaattatcccttgctccacacatc-aagttgttattggt 10750113  T
Q  125 gtaattttttccatcgaattcacaaca 151  Q
    || |||||    |||||||||||||||    
T  10750114 gtgatttt---gatcgaattcacaaca 10750137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 10757493 - 10757613
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggt 124  Q
    |||||||||||||||||||||||| ||  |||||||||||||| ||||| ||| |||||||| |||||  |||||| |||||||| || |||||||||||    
T  10757493 cgttgttttctacttttggcttgtatt--taattgttccatacgctttgattttggttgcttaattatcccttgctccacacatc-aagttgttattggt 10757589  T
Q  125 gtaattttttccatcgaattcacaaca 151  Q
    || |||||    |||||||||||||||    
T  10757590 gtgatttt---gatcgaattcacaaca 10757613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 31 - 151
Target Start/End: Original strand, 15552569 - 15552685
Alignment:
Q  31 ttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 130  Q
    |||||||||||| |||||| ||||||| | |  ||||||||||||||  |||||||||||||  ||| |||||| |||| || ||||||||||||| |||    
T  15552569 ttttctacttttagcttgtatttataacttt--catacactttgttttagttgcttgattatcccttacttcacgcatc-aagttgttattggtgtgatt 15552665  T
Q  131 ttttccatcgaattcacaaca 151  Q
    |||| ||||||||||||||||    
T  15552666 tttt-catcgaattcacaaca 15552685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 39397981 - 39397916
Alignment:
Q  18 ttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttg 83  Q
    |||||||||  |||||||||||||||||||| ||||||||||||| |||||||||||||| |||||    
T  39397981 ttctctctcactgttttctacttttggcttgagtttataattgtttcatacactttgttttggttg 39397916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 26 - 126
Target Start/End: Original strand, 31543052 - 31543149
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| |||||||   || ||||| |||||||| |||||||||||||   |||||| |||||||| || ||||||||||||    
T  31543052 cgttgttttctacttttggcttgtatttataa--ctttcatacgctttgttttggttgcttgattaacccttgctccacacatc-aagttgttattggtg 31543148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 132
Target Start/End: Original strand, 4410343 - 4410442
Alignment:
Q  29 tgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaa 128  Q
    ||||||||||||||||||||| |||||||   |||||||||| || ||| ||||||||||||||  |||||| |||||||| || ||||||||||||| |    
T  4410343 tgttttctacttttggcttgtatttataa--cttccatacacctt-ttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtga 4410438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 9020506 - 9020649
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    |||||||||||||  | || ||| ||||| ||||||||||||| ||||||||||||| |  || ||||||||| ||| |||||||||||||||  |||||    
T  9020506 ttgtgttctctctcttcttttctatcgttattttctacttttg-cttgtgtttataact--tcaatacactttattt-ggttgcttgattattaattgct 9020601  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
     |||| ||||||| | ||||| |||| |||||   ||| ||||||||||||    
T  9020602 ccacagatcaaatattttattcgtgtgatttt---cattgaattcacaaca 9020649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 31472605 - 31472458
Alignment:
Q  1 ttgtgttctctcttctt-ttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgc 99  Q
    ||||||||||||||||| || |||||| |||||||||| |||||| ||||  |||||| |||| |  ||   |||| | |||||||||| ||| |||| |    
T  31472605 ttgtgttctctcttcttcttttctctcattgttttctaattttggtttgtaattataactgttacccac---ttgtattggttgcttgagtatctcttac 31472509  T
Q  100 ttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    |||||||||||| |||||||| |||||  | |||| |||||||||| |||||    
T  31472508 ttcacacatcaagtttgttatcggtgt-gtatttttcatcgaattcgcaaca 31472458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 15143754 - 15143817
Alignment:
Q  2 tgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttcca 65  Q
    |||||||||||| |||||||||| |  | |||||||||||| | ||||||||||||||||||||    
T  15143754 tgtgttctctctacttttctctcgctattttttctactttttgtttgtgtttataattgttcca 15143817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 152
Target Start/End: Complemental strand, 23741813 - 23741696
Alignment:
Q  31 ttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 129  Q
    |||||||||||||||| || |||   ||| |||||||| ||||| ||| |||||||| |||||  |||||| |||||||||| || ||||||||||| ||    
T  23741813 ttttctacttttggctcgtatttt--attattccatacgctttgattttggttgcttaattatcccttgctccacacatcaagtt-gttattggtgtgat 23741717  T
Q  130 tttttccatcgaattcacaacag 152  Q
    ||||  | |||||||||||||||    
T  23741716 tttt--cgtcgaattcacaacag 23741696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 4898033 - 4898071
Alignment:
Q  21 tctctcgttgttttctacttttggcttgtgtttataattg 60  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  4898033 tctctcgttgttttctactttt-gcttgtgtttataattg 4898071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 151
Target Start/End: Complemental strand, 15354530 - 15354414
Alignment:
Q  31 ttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 129  Q
    |||||||||||||||| || |||   ||| |||||||| ||||| ||| |||||||| |||||  |||||| |||||||||| || ||||||||||| ||    
T  15354530 ttttctacttttggctcgtatttt--attattccatacgctttgattttggttgcttaattatcccttgctccacacatcaagtt-gttattggtgtgat 15354434  T
Q  130 tttttccatcgaattcacaaca 151  Q
    ||||  | ||||||||||||||    
T  15354433 tttt--cgtcgaattcacaaca 15354414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 151
Target Start/End: Complemental strand, 15356806 - 15356690
Alignment:
Q  31 ttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 129  Q
    |||||||||||||||| || |||   ||| |||||||| ||||| ||| |||||||| |||||  |||||| |||||||||| || ||||||||||| ||    
T  15356806 ttttctacttttggctcgtatttt--attattccatacgctttgattttggttgcttaattatcccttgctccacacatcaagtt-gttattggtgtgat 15356710  T
Q  130 tttttccatcgaattcacaaca 151  Q
    ||||  | ||||||||||||||    
T  15356709 tttt--cgtcgaattcacaaca 15356690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 15445242 - 15445141
Alignment:
Q  21 tctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttat 120  Q
    ||||||| |||||||||  ||| |||||||||||||||  || ||| ||| |||||| | |||||||||||||  ||||| |||||||||| | | ||||    
T  15445242 tctctcgatgttttctatcttttgcttgtgtttataat--tttcatccacgttgttttgattgcttgattatt--ttgctccacacatcaagtattttat 15445147  T
Q  121 tggtgt 126  Q
    ||||||    
T  15445146 tggtgt 15445141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 151
Target Start/End: Original strand, 23665368 - 23665484
Alignment:
Q  31 ttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 129  Q
    |||||||||||||||| || ||  | ||| |||||||| ||||| ||| |||||||| |||||  |||||| |||||||| || ||||||||||||| ||    
T  23665368 ttttctacttttggctcgtatt--ttattattccatacgctttgattttggttgcttaattatcccttgctccacacatc-aagttgttattggtgtgat 23665464  T
Q  130 tttttccatcgaattcacaaca 151  Q
    ||||  | ||||||||||||||    
T  23665465 tttt--cgtcgaattcacaaca 23665484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 151
Target Start/End: Complemental strand, 23793219 - 23793103
Alignment:
Q  31 ttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 129  Q
    |||||||||||||||| || |||   ||| |||||||| ||||| ||| |||||||| |||||  |||||| |||||||||| || ||||||||||| ||    
T  23793219 ttttctacttttggctcgtatttt--attattccatacgctttgattttggttgcttaattatcccttgctccacacatcaagtt-gttattggtgtgat 23793123  T
Q  130 tttttccatcgaattcacaaca 151  Q
    ||||  | ||||||||||||||    
T  23793122 tttt--cgtcgaattcacaaca 23793103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 2144544 - 2144474
Alignment:
Q  21 tctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattattt 94  Q
    ||||||| ||||||||||||||| ||||||||||||||||||  |  ||| ||||||  |||||||||||||||    
T  2144544 tctctcgctgttttctacttttg-cttgtgtttataattgtt--acccacattgttttagttgcttgattattt 2144474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 109; Significance: 7e-55; HSPs: 87)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 12267966 - 12267818
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| | ||||    
T  12267966 ttgtgttctctcttcttt-ctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgactattccctgct 12267868  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaacag 152  Q
     ||||||||||||||||||||||||||||||||  |||||| ||||||||||    
T  12267867 ccacacatcaaatttgttattggtgtaattttt--catcgagttcacaacag 12267818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 32264029 - 32263880
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||  ||||||    
T  32264029 ttgtgttctctcttcctttctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgtctgattatcacttgct 32263930  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaacag 152  Q
     |||||||||||||||||||| |||| ||||||  | |||||||||||||||    
T  32263929 ccacacatcaaatttgttattagtgtgattttt--cttcgaattcacaacag 32263880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 43423454 - 43423308
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    |||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||  ||||||    
T  43423454 ttgtgttctctcttcttttctctcgc--tgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgactatcccttgct 43423357  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
     |||||||||| |||||||||||||||||||||  |||||||||| |||||    
T  43423356 ccacacatcaactttgttattggtgtaattttt--catcgaattcgcaaca 43423308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 27635649 - 27635515
Alignment:
Q  1 ttgtgttctctcttcttttct---ctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttctt 97  Q
    |||||||||||||||| ||||   |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  27635649 ttgtgttctctcttctcttcttttctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattattcctt 27635550  T
Q  98 gcttcacacatcaaatttgttattggtgtaatttt 132  Q
    ||| |||||||||| |||||||||||||| |||||    
T  27635549 gctccacacatcaagtttgttattggtgtgatttt 27635515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 43421406 - 43421260
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    |||||||||||||||||||||||| |  |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||    
T  43421406 ttgtgttctctcttcttttctctcgc--tgttttatacttttggcttgtgtttataattgttccatacactttgttttggttgcttgactatatcttgct 43421309  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
     |||||||||| |||||||||||||| ||||||  |||||||||| |||||    
T  43421308 ccacacatcaactttgttattggtgtgattttt--catcgaattcgcaaca 43421260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 1313675 - 1313822
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||  ||||||    
T  1313675 ttgtgttctctcttcttttctc--tcgttgttttctacttttgacttgtgtttataattgttccatacactttgttttggttgcttgactatcccttgct 1313772  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
     |||||||||| |||||||||||||| | ||||| |||||||||| |||||    
T  1313773 ccacacatcaagtttgttattggtgtgagttttt-catcgaattcgcaaca 1313822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 1626674 - 1626549
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||| ||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||  |||||||||||||| ||||||    
T  1626674 ttgtgttctctcttcctttctctctcgttgtttttcacttttgacttgtgtttataattgttccatacactttgtttttgttgcttgattattccttgct 1626575  T
Q  101 tcacacatcaaatttgttattggtgt 126  Q
     |||||||||| ||||||||||||||    
T  1626574 ccacacatcaagtttgttattggtgt 1626549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 32219351 - 32219503
Alignment:
Q  1 ttgtgttctctcttctttt-ctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttctt 97  Q
    ||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||  |||    
T  32219351 ttgtgttctctcttctttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcttgattatccctt 32219450  T
Q  98 gcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    ||| |||||||||| ||||||||| |||| ||||||| ||||||||||||||||    
T  32219451 gctccacacatcaagtttgttatttgtgtgatttttt-catcgaattcacaaca 32219503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 15781145 - 15781294
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||| |  |||||||||||  ||| ||    
T  15781145 ttgttttctctcttcttttctctctcgttgttttctacttttgacttgtgtttataactgttccatacactttattttgcctgcttgattatcccttact 15781244  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaacag 152  Q
     |||||||||| ||||||||||||||   |||||||||||||||||||||||    
T  15781245 ccacacatcaagtttgttattggtgt--gtttttccatcgaattcacaacag 15781294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 2 - 133
Target Start/End: Original strand, 28181271 - 28181401
Alignment:
Q  2 tgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgctt 101  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||  | ||||||     
T  28181271 tgtgttctctcttcttttctctgtcgctgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgtttgatt-gtccttgctc 28181369  T
Q  102 cacacatcaaatttgttattggtgtaattttt 133  Q
    |||||||||| |||||||||||||| ||||||    
T  28181370 cacacatcaagtttgttattggtgtgattttt 28181401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 51674757 - 51674608
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacac-tttgtttcggttgcttgattatttcttgc 99  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |  |||||| ||||||||||||||| |||||    
T  51674757 ttgtgttctctcttcttttctctctcgctgttttctacttttggcttgtgtttatatttgttccatacccacttgttt-ggttgcttgattattccttgc 51674659  T
Q  100 ttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    | || ||||||| |||||||||||||| ||||| | ||||||||||||||||    
T  51674658 tccatacatcaagtttgttattggtgtgattttct-catcgaattcacaaca 51674608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 18096891 - 18096740
Alignment:
Q  1 ttgtgttctctcttcttt-tctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttctt 97  Q
    |||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||  |||    
T  18096891 ttgtgttctctcttctttctctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatccctt 18096792  T
Q  98 gcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    ||| |||||||||| |||||||||||||||||||||  |||||||||| |||||    
T  18096791 gctccacacatcaagtttgttattggtgtaattttt--catcgaattcgcaaca 18096740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 5926756 - 5926611
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||| |||||||||| ||| ||    
T  5926756 ttgtgttctcttttcctttctctctcgttgttttctacttttg-cttgtgtttataattgttccttacactttgttttggttacttgattattccttact 5926658  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaa 149  Q
    |||||||| || |||||||||||||| | ||||  ||||||||||||||    
T  5926657 tcacacatgaagtttgttattggtgtgagtttt--catcgaattcacaa 5926611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 48361662 - 48361511
Alignment:
Q  1 ttgtgttctctcttcttttct---ctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttctt 97  Q
    |||||||||||||||| ||||   |||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||  ||    
T  48361662 ttgtgttctctcttctcttcttttctctcgttgttttctacttttgacttgtgattataattgttccatacactttgttttggttgcttgattattcatt 48361563  T
Q  98 gcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaa 149  Q
    | | || |||| || |||||||||| ||||| ||||||||||||||||||||    
T  48361562 gttccatacattaagtttgttattgatgtaagtttttccatcgaattcacaa 48361511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 53915487 - 53915337
Alignment:
Q  1 ttgtgttctctcttcttttctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgc 99  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||| |||  |||||    
T  53915487 ttgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgtttataattgtttcatacacttggttttggttgcttgactatcccttgc 53915388  T
Q  100 ttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaacag 152  Q
    | || ||||||| |||||||||||||| ||||||  |||||||||| ||||||    
T  53915387 tccatacatcaagtttgttattggtgtgattttt--catcgaattcgcaacag 53915337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 53917655 - 53917522
Alignment:
Q  1 ttgtgttctctcttcttttctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgc 99  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||  |||||    
T  53917655 ttgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgcttgactatcccttgc 53917556  T
Q  100 ttcacacatcaaatttgttattggtgtaattttt 133  Q
    | |||||||||| ||||||||| |||| ||||||    
T  53917555 tccacacatcaagtttgttattagtgtgattttt 53917522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 3314951 - 3315077
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgc 99  Q
    ||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||  |||||    
T  3314951 ttgtgttctctcttcctttctctctcgctgttttctacgtttggcttgtgtttataattgttccatacactttgcttttggttgcttgattatcccttgc 3315050  T
Q  100 ttcacacatcaaatttgttattggtgt 126  Q
    | |||||||||| ||| ||||||||||    
T  3315051 tccacacatcaagtttattattggtgt 3315077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 6484626 - 6484773
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgc 99  Q
    |||||||||||||| ||  |||||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||| |||||| |||||    
T  6484626 ttgtgttctctcttatt--ctctctcgctgttttctacttttgacttgtgtttataattgttccatacactttgattttggttgcttaattattccttgc 6484723  T
Q  100 ttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    | |||||||||||||||||||| |||| |||||||  || ||||||||||||    
T  6484724 tccacacatcaaatttgttattagtgtgatttttt--attgaattcacaaca 6484773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 36012093 - 36012243
Alignment:
Q  1 ttgtgttctctcttctttt-ctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttg 98  Q
    ||||||||||||||||||| ||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||  ||||    
T  36012093 ttgtgttctctcttctttttctctcgctgttgttttctacttttcgcttgtgtttataattgttccatacactttgttttggttgtttgattatcccttg 36012192  T
Q  99 cttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    || || ||||||| |||||||||||||| ||||||  |||||||||| |||||    
T  36012193 ctccatacatcaagtttgttattggtgtgattttt--catcgaattcgcaaca 36012243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 880442 - 880302
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    |||||||||||||||||||||||| |  |||||||||||||||| ||||| |||||| ||||||||||||||||||| ||||||||||||| | ||||||    
T  880442 ttgtgttctctcttcttttctctcgc--tgttttctacttttggtttgtgattataactgttccatacactttgttttggttgcttgattaatccttgct 880345  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaatt 144  Q
     |||||||||| |||||||| ||||| ||||||| |||||||||    
T  880344 ccacacatcaagtttgttatgggtgtgatttttt-catcgaatt 880302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 53468444 - 53468319
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||| ||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||| || ||||  ||||||  |||||    
T  53468444 ttgtgttctctcttcctttctctctcgctattttctacttttgacttgtgtttataattgttccatacactttgttttggctgctccattattcattgct 53468345  T
Q  101 tcacacatcaaatttgttattggtgt 126  Q
     |||||||||| ||||||||||||||    
T  53468344 ccacacatcaagtttgttattggtgt 53468319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 4308272 - 4308122
Alignment:
Q  1 ttgtgttctctcttctttt-ctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttg 98  Q
    ||||||||||||||||||| ||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| | ||||||| ||||    
T  4308272 ttgtgttctctcttctttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacactttgttttggttgttggattattccttg 4308173  T
Q  99 cttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    || |||||||| || ||||||||||||| || |||| |||||||||| |||||    
T  4308172 ctccacacatc-aagttgttattggtgtgatatttt-catcgaattcgcaaca 4308122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 24979974 - 24980127
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgtt----ttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttc 95  Q
    ||||||||||||||||||| ||||||||||||    |||||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||  |    
T  24979974 ttgtgttctctcttctttt-tctctcgttgttgtttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatccc 24980072  T
Q  96 ttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaacag 152  Q
    ||||| |||||||||| ||||||||||||||   ||||  |||||||||||||||||    
T  24980073 ttgctccacacatcaagtttgttattggtgt--gttttctcatcgaattcacaacag 24980127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 18099161 - 18099010
Alignment:
Q  1 ttgtgttctctcttcttt-tctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttctt 97  Q
    ||||||||||| |||||| |||||| | |||||||||||||||||||||||||||| ||||||||||||||||||| |||  |||||||||||||  |||    
T  18099161 ttgtgttctcttttctttctctctcgctgttgttttctacttttggcttgtgtttacaattgttccatacactttgatttttgttgcttgattatccctt 18099062  T
Q  98 gcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    ||| |||||||||| |||||||||||||| ||||||  |||||||||| |||||    
T  18099061 gctccacacatcaagtttgttattggtgtgattttt--catcgaattcccaaca 18099010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 47148885 - 47148795
Alignment:
Q  2 tgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattat 92  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  47148885 tgtgttctctcttcctttctctctcgttgttttctacttttgacttgtgtttataattgttccatacactttgttttggttgtttgattat 47148795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 18162929 - 18163080
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttg---ttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttct 96  Q
    ||||||||||||||||||| ||||||| ||   |||||||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||  ||    
T  18162929 ttgtgttctctcttctttt-tctctcgctgcagttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatccct 18163027  T
Q  97 tgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    | || |||||||||||||| |||||||||| ||||||  ||||||||||| ||||    
T  18163028 tactccacacatcaaatttattattggtgtgattttt--catcgaattcataaca 18163080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 4666780 - 4666912
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||||||||||||||| |||||| ||||||||| |||| |||||||||||| |||||||||| ||| |||||| |||| ||  ||| ||    
T  4666780 ttgtgttctctcttcttttctctctcgctgttttatacttttggtttgtttttataattgtttcatacactttattttggttgcatgataatcacttact 4666879  T
Q  101 tcacacatcaaatttgttattggtgtaattttt 133  Q
     |||||||||||||| |||||||||| ||||||    
T  4666880 ccacacatcaaatttattattggtgtgattttt 4666912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 51943636 - 51943758
Alignment:
Q  1 ttgtgttctctcttcttttct---ctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttctt 97  Q
    |||||||||||||||| ||||   |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||  |||    
T  51943636 ttgtgttctctcttctcttcttttctctcgctgttttctacttttggcttgtgtttataattgttccaaacactttgttttggttgcttgactatccctt 51943735  T
Q  98 gcttcacacatcaaatttgttat 120  Q
    ||| |||||||||| ||||||||    
T  51943736 gctccacacatcaagtttgttat 51943758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 3307026 - 3307177
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgc 99  Q
    ||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||| ||| | ||| ||||||||  |||||    
T  3307026 ttgtgttctctcttcctttctctttcgctgttttctacttttggcttgtgtttataattgtttcatacactttgtttttgattgtttgattatcccttgc 3307125  T
Q  100 ttcacacatcaa-atttgttattggtgtaattttttccatcgaattcacaacag 152  Q
    |||| |||||||  ||||||||||||||   ||||  |||||||||||||||||    
T  3307126 ttcatacatcaagttttgttattggtgt--gttttctcatcgaattcacaacag 3307177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 41849325 - 41849470
Alignment:
Q  1 ttgtgttctctcttctttt-ctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgc 99  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||   || |||||||||||||| ||||||||||||||  |||||    
T  41849325 ttgtgttctctcttctttttctctctcgttgttttctacttttggcttgtatttataa--ctttcatacactttgttttggttgcttgattatcccttgc 41849422  T
Q  100 ttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    | |||||||| || ||||||||||||| |||||   |||||||||| |||||    
T  41849423 tccacacatc-aagttgttattggtgtgatttt---catcgaattcgcaaca 41849470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 880231 - 880090
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||||||||||||  |||||||||||||||||| ||||| |||||| |||| ||||||||||||||   ||||||||||||| ||| ||    
T  880231 ttgtgttctctcttcttttctctc--gttgttttctacttttggtttgtgattataactgtttcatacactttgttttctttgcttgattattccttact 880134  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattc 145  Q
     |||||||||| ||| |||||||||| | ||||| ||||||||||    
T  880133 ccacacatcaagtttattattggtgtgacttttt-catcgaattc 880090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 45883206 - 45883341
Alignment:
Q  1 ttgtgttctctcttcttttct---ctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttctt 97  Q
    |||||||||||||||| ||||   |||| | |||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||| | |||  |||    
T  45883206 ttgtgttctctcttctcttcttttctcttgctgttttctacttctggcttgtgattataattgttccatacactttgttttggttgcttaactatccctt 45883305  T
Q  98 gcttcacacatcaaatttgttattggtgtaattttt 133  Q
    ||| |||||||||| |||||||||||||| ||||||    
T  45883306 gctccacacatcaagtttgttattggtgtgattttt 45883341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 4 - 151
Target Start/End: Complemental strand, 54691562 - 54691417
Alignment:
Q  4 tgttctctcttcttttctctctcg-ttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttc 102  Q
    |||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||| |||||||  |||||| |    
T  54691562 tgttttctcttcctttctctctcggttgttttctacttttggcttgtgtttataattgtttcatacattttgttttggttgcctgattatcacttgctcc 54691463  T
Q  103 acacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    |||||| ||||||||||||| |||   ||||  ||||||||||||||||    
T  54691462 acacat-aaatttgttattgatgt--gttttctcatcgaattcacaaca 54691417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 27101172 - 27101026
Alignment:
Q  1 ttgtgttctctcttc-ttttctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttg 98  Q
    ||||||||||||||| ||||||||  | |||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||| ||||||||  |||    
T  27101172 ttgtgttctctcttccttttctcttgctgttgttttctactttttgcttgtgattataattgttccatacactttgttttggttgcctgattattcattg 27101073  T
Q  99 cttcacacatcaaatttgttattggtgtaattttttccatcgaattcac 147  Q
    || |||||||| || ||||||||||||| || |||| ||||||||||||    
T  27101072 ctccacacatc-aagttgttattggtgtgatatttt-catcgaattcac 27101026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 6232066 - 6232208
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    |||||||||||||||||| |||||||| |||||| || ||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||| ||        
T  6232066 ttgtgttctctcttcttt-ctctctcgctgttttttatttttgacttgtgtttataattgttccatacactttattttggttgcttgattattactc--- 6232161  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
     |||||||||||||||||||| |||| |||||   |||||||||| |||||    
T  6232162 -cacacatcaaatttgttattagtgtgatttt---catcgaattcgcaaca 6232208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 21 - 145
Target Start/End: Complemental strand, 47701645 - 47701526
Alignment:
Q  21 tctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttat 120  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||| |||| |   |||||||| ||||||||    
T  47701645 tctctcattgttttctacttttggcttgtgttcataattgttccatacactttgttttcgttgcttgattattacttgat---cacatcaagtttgttat 47701549  T
Q  121 tggtgtaattttttccatcgaattc 145  Q
    |||||| ||||||  ||||||||||    
T  47701548 tggtgtgattttt--catcgaattc 47701526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 28101993 - 28101848
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgc 99  Q
    ||||||||||||||| ||||||||||| |||||||||||||||| |||||||||  |||| |  || ||||||| ||| ||||||||||||||  |||||    
T  28101993 ttgtgttctctcttcctttctctctcgctgttttctacttttgggttgtgttta--attgct--atccactttgattttggttgcttgattatcccttgc 28101898  T
Q  100 ttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    | |||||||||| ||| |||||||||||||||||  ||||||||||||||||    
T  28101897 tccacacatcaagtttattattggtgtaattttt--catcgaattcacaaca 28101848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 53591451 - 53591570
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    |||| ||||||||||||||||||| |  |||||||| |||||| ||| ||||||||||||||||||||| ||||||| ||||||||||||||  |||| |    
T  53591451 ttgtattctctcttcttttctctcgc--tgttttctgcttttgacttatgtttataattgttccatacattttgttttggttgcttgattatcccttgtt 53591548  T
Q  101 tcacacatcaaatttgttattg 122  Q
     |||||||||||||||||||||    
T  53591549 ccacacatcaaatttgttattg 53591570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 1321777 - 1321897
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||||||||| |||||| |||||||  |||||| |||||||||| |||||||||||||    
T  1321777 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcctgattatcccttgctccacacatcaagtttgttattggtg 1321874  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | |||||   |||||||||| |||||    
T  1321875 tgatttt---catcgaattcgcaaca 1321897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 10955986 - 10955867
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||    
T  10955986 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtg 10955890  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | |||||   ||||||||||||||||    
T  10955889 tgatttt---catcgaattcacaaca 10955867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 10958282 - 10958163
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||  ||||||| ||||||||||||| |||||||||||||| ||||||| |||||||| || ||||||||||||    
T  10958282 cgttgttttctacttttggcttgtattta--attgttctatacactttgttttggttgcttgattatctcttgctccacacatc-aagttgttattggtg 10958186  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | |||||   ||||||||||||||||    
T  10958185 tgatttt---catcgaattcacaaca 10958163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 43228557 - 43228687
Alignment:
Q  1 ttgtgttctctcttctttt-ctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttg 98  Q
    ||||||||||||||| ||| ||||| | ||||||||||| ||||||||||| ||| ||||||||||||||||||||||| |||||||||||||| |||||    
T  43228557 ttgtgttctctcttcctttactctcgctgttgttttctaattttggcttgtattt-taattgttccatacactttgttttggttgcttgattatctcttg 43228655  T
Q  99 cttcacacatcaaatttgttattggtgtaattt 131  Q
    || |||||||| || ||||||||||||| ||||    
T  43228656 ctccacacatc-aagttgttattggtgtgattt 43228687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 11 - 152
Target Start/End: Complemental strand, 9604585 - 9604446
Alignment:
Q  11 tcttcttttctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatc 109  Q
    |||||||||||||| | ||||||||||| ||||||| |||| ||||||||||| ||||||||||| || |||| |||||||||| |||||| ||||||||    
T  9604585 tcttcttttctctcgctgttgttttctatttttggcctgtgattataattgtttcatacactttggtttggttacttgattattccttgctccacacatc 9604486  T
Q  110 aaatttgttattggtgtaattttttccatcgaattcacaacag 152  Q
     || ||||||||||||| ||||||  |||||||||| ||||||    
T  9604485 -aagttgttattggtgtgattttt--catcgaattcgcaacag 9604446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 25688151 - 25688005
Alignment:
Q  1 ttgtgttctctcttc-ttttctctc-tcgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttctt 97  Q
    ||||||||||||||| ||||||||| | | |||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||  |||||||  |||    
T  25688151 ttgtgttctctcttccttttctctcgttgatgttttctacttttggcttgtgtttacaattgttccatacactttgattttggttgtctgattatcactt 25688052  T
Q  98 gcttcacacatcaaatttgttattggtgtaattttttccatcgaatt 144  Q
    ||| ||||||| || |||||||||||||| | ||||  |||||||||    
T  25688051 gctccacacataaagtttgttattggtgtgagttttctcatcgaatt 25688005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 5886496 - 5886618
Alignment:
Q  27 gttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 126  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||| ||||  |||||| |||||||| || |||||||||||||    
T  5886496 gttgttttctacttttggcttgtgattataactgttccatacactttgttt-ggttgcttgtttatcccttgctccacacatc-aagttgttattggtgt 5886593  T
Q  127 aattttttccatcgaattcacaaca 151  Q
     ||||||  | |||||||| |||||    
T  5886594 gatttttctcgtcgaattcgcaaca 5886618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 5899969 - 5900091
Alignment:
Q  27 gttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 126  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||| ||||  |||||| |||||||| || |||||||||||||    
T  5899969 gttgttttctacttttggcttgtgattataactgttccatacactttgttt-ggttgcttgtttatcccttgctccacacatc-aagttgttattggtgt 5900066  T
Q  127 aattttttccatcgaattcacaaca 151  Q
     ||||||  | |||||||| |||||    
T  5900067 gatttttctcgtcgaattcgcaaca 5900091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 25533723 - 25533842
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||||||||| |||||||||| ||| ||||||| |||||||| || ||||||||||||    
T  25533723 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttga-tatctcttgctccacacatc-aagttgttattggtg 25533818  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | ||||||  |||||||||| |||||    
T  25533819 tgattttt--catcgaattcgcaaca 25533842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 42990570 - 42990717
Alignment:
Q  1 ttgtgttctctcttcttttct-ctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttg 98  Q
    ||||||||||||| ||||||| ||| | ||||||||||||||||||||||| ||||||| |  | |||||||||||||| |||||| |||||||  ||||    
T  42990570 ttgtgttctctctccttttcttctcgccgttgttttctacttttggcttgtatttataact--tacatacactttgttttggttgcctgattatcccttg 42990667  T
Q  99 cttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    || |||||||||| |||||||||||||| |||||   |||||||||| |||||    
T  42990668 ctccacacatcaagtttgttattggtgtgatttt---catcgaattcgcaaca 42990717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 50494297 - 50494417
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||  ||||| |||||||| |||||||| |||||||| ||||| ||||||| |||||||| || ||||||||||||    
T  50494297 cgttgttttctacttttggcttgtatt--taattattccatacgctttgttttggttgcttaattatctcttgctccacacatc-aagttgttattggtg 50494393  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | ||||||  ||||||||||||||||    
T  50494394 tgattttt--catcgaattcacaaca 50494417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 43226349 - 43226495
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgtt--ttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttg 98  Q
    ||||||||||||||| ||| ||||||| ||||  ||||||||||||||||| ||| |||||||||||||||||| |||| |||||||||||||| |||||    
T  43226349 ttgtgttctctcttccttt-tctctcgctgttgtttctacttttggcttgtattt-taattgttccatacactt-gttttggttgcttgattatctcttg 43226445  T
Q  99 cttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    || |||||||| || ||||||||||||| |||| |  |||||||||| |||||    
T  43226446 ctccacacatc-aagttgttattggtgtgatttct--catcgaattcgcaaca 43226495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 5191951 - 5192052
Alignment:
Q  28 ttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgta 127  Q
    |||||||||||||||||||||| ||||  ||||||||||||||||||||| ||||||||||||||  |||||| |||||||| || |||||||||||||     
T  5191951 ttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtg 5192047  T
Q  128 atttt 132  Q
    |||||    
T  5192048 atttt 5192052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 23633719 - 23633862
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||  ||||||||  | |||||||||||| |||||||||||||||| |  |||||||||||||||| |||||||||||| |  ||||||    
T  23633719 ttgtgttctctctttctttctctc--gatgttttctacttgtggcttgtgtttataaat--tccatacactttgttttggttgcttgattttcacttgct 23633814  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    ||||||||| | | | |||||||||| ||||||  ||||||||||||||||    
T  23633815 tcacacatctagtat-ttattggtgtgattttt--catcgaattcacaaca 23633862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 39715731 - 39715804
Alignment:
Q  1 ttgtgttctctctt-cttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacacttt 73  Q
    |||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  39715731 ttgtgttctctctttcctttctctctcgctgttttctacttttggcttgtgtttataattgttccatacacttt 39715804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 21 - 151
Target Start/End: Complemental strand, 28761412 - 28761287
Alignment:
Q  21 tctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttat 120  Q
    ||||||||||||||||||||||| |||||| ||||||||  |||||||||||| ||| ||||| ||||||||  |||||| ||||||||||  || ||||    
T  28761412 tctctcgttgttttctacttttg-cttgtgattataatt--tccatacactttattttggttgtttgattatcacttgctccacacatcaagattattat 28761316  T
Q  121 tggtgtaattttttccatcgaattcacaaca 151  Q
    |||||| ||||||  ||||||||||||||||    
T  28761315 tggtgtgattttt--catcgaattcacaaca 28761287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 132
Target Start/End: Complemental strand, 10084348 - 10084245
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||  ||||| ||||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||    
T  10084348 cgttgttttctacttttggcttgtattta--attgtcccatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtg 10084252  T
Q  126 taatttt 132  Q
    | |||||    
T  10084251 tgatttt 10084245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 132
Target Start/End: Complemental strand, 10191271 - 10191168
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||  ||||| ||||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||    
T  10191271 cgttgttttctacttttggcttgtattta--attgtcccatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtg 10191175  T
Q  126 taatttt 132  Q
    | |||||    
T  10191174 tgatttt 10191168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 25389204 - 25389326
Alignment:
Q  26 cgttgttttctactttt-ggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggt 124  Q
    ||||||||||||||||| ||||||| ||||  ||| ||||||||||||||||| ||||||||||||||  |||||| |||||||| || |||||||||||    
T  25389204 cgttgttttctactttttggcttgtattta--attattccatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggt 25389300  T
Q  125 gtaattttttccatcgaattcacaaca 151  Q
     | ||||||| ||||||||||||||||    
T  25389301 atgatttttt-catcgaattcacaaca 25389326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 151
Target Start/End: Original strand, 31151612 - 31151754
Alignment:
Q  2 tgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgctt 101  Q
    ||||||||||||||||||||||| |  | ||||||||| ||  ||||||||||||| |  |||||||||||||||| ||||||||||||||| ||||||     
T  31151612 tgtgttctctcttcttttctctcgctgt-ttttctactctta-cttgtgtttataact--tccatacactttgttttggttgcttgattattacttgctc 31151707  T
Q  102 cacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    |||||||||| | | |||||||||| ||||||  ||||||||||||||||    
T  31151708 cacacatcaagtat-ttattggtgtgattttt--catcgaattcacaaca 31151754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 11168399 - 11168519
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggt 124  Q
    |||||||||||||||||||||||| ||  |||||||||||||||||||| ||| ||||||||||||||  |||||| |||||||| || |||||||||||    
T  11168399 cgttgttttctacttttggcttgtatt--taattgttccatacactttgattttggttgcttgattatcccttgctccacacatc-aagttgttattggt 11168495  T
Q  125 gtaattttttccatcgaattcacaaca 151  Q
    || |||||   |||||||||| |||||    
T  11168496 gtgatttt---catcgaattcgcaaca 11168519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 17795525 - 17795670
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||  ||| |||||||||||||||||||||||  ||||| |||||| |  |||||||| ||| ||| |||||||||| |||   |||||    
T  17795525 ttgtgttctctctttcttt-tctctcgttgttttctacttttgt-ttgtgattataact--tccatacattttattttggttgcttgactatcagttgct 17795620  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaacag 152  Q
     |||||||||||||| |||||||||| ||||||  |||||||||||||||||    
T  17795621 ccacacatcaaatttattattggtgtgattttt--catcgaattcacaacag 17795670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 19103965 - 19104110
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||  ||| |||||||||||||||||||||||  ||||| |||||| |  |||||||| ||| ||| |||||||||| |||   |||||    
T  19103965 ttgtgttctctctttcttt-tctctcgttgttttctacttttgt-ttgtgattataact--tccatacattttattttggttgcttgactatcagttgct 19104060  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaacag 152  Q
     |||||||||||||| |||||||||| ||||||  |||||||||||||||||    
T  19104061 ccacacatcaaatttattattggtgtgattttt--catcgaattcacaacag 19104110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 456206 - 456325
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| |||||||   || ||||| |||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||    
T  456206 cgttgttttctacttttggcttgtatttataa--ctttcatacgctttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtg 456302  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | |||||   ||||||||||||||||    
T  456303 tgatttt---catcgaattcacaaca 456325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 458583 - 458702
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| |||||||   || ||||| |||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||    
T  458583 cgttgttttctacttttggcttgtatttataa--ctttcatacgctttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtg 458679  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | |||||   ||||||||||||||||    
T  458680 tgatttt---catcgaattcacaaca 458702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 747057 - 747177
Alignment:
Q  27 gttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    ||||||||||||||||||||||| |||||||   || ||||||||||| ||| ||||||||||||||  |||||| |||||||| || ||||||||||||    
T  747057 gttgttttctacttttggcttgtatttataa--ctttcatacactttgattttggttgcttgattatcccttgctccacacatc-aagttgttattggtg 747153  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | ||||||  ||||||||||||||||    
T  747154 tgattttt--catcgaattcacaaca 747177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 132
Target Start/End: Complemental strand, 53894009 - 53893910
Alignment:
Q  31 ttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 130  Q
    ||||||||||||||||| ||| | ||||| ||||||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||| |||    
T  53894009 ttttctacttttggctt-tgtatttaattattccatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgatt 53893912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 132
Target Start/End: Complemental strand, 561747 - 561640
Alignment:
Q  21 tctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttat 120  Q
    ||||||| ||||||||||||||| ||||||||||||| |  |||||||||||||||| ||||||||||||||| ||| || |||||||||| | | ||||    
T  561747 tctctcgatgttttctacttttg-cttgtgtttataact--tccatacactttgttt-ggttgcttgattattacttactccacacatcaagtattttat 561652  T
Q  121 tggtgtaatttt 132  Q
    |||||| |||||    
T  561651 tggtgtgatttt 561640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 112
Target Start/End: Original strand, 26720844 - 26720929
Alignment:
Q  25 tcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaa 112  Q
    ||||| ||||||||||||||||||| ||||||| |  |||||||||||||||| ||||||||||||||  |||||| |||||||||||    
T  26720844 tcgttcttttctacttttggcttgtatttataact--tccatacactttgttttggttgcttgattatcccttgctccacacatcaaa 26720929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 38210669 - 38210789
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||  ||||| |||||||| |||||||| | ||| ||||| ||  |||||| |||||||| || ||||||||||||    
T  38210669 cgttgttttctacttttggcttgtatt--taattattccatacgctttgttttgtttgtttgataatcccttgctccacacatc-aagttgttattggtg 38210765  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | ||||||  ||||||||||||||||    
T  38210766 tgattttt--catcgaattcacaaca 38210789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 131
Target Start/End: Original strand, 38890338 - 38890441
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggt 124  Q
    |||||||||||||||||||||||| ||  |||||||||||||| ||||| ||| ||||||||||||||  |||||| |||||||| || |||||||||||    
T  38890338 cgttgttttctacttttggcttgtatt--taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatc-aagttgttattggt 38890434  T
Q  125 gtaattt 131  Q
    || ||||    
T  38890435 gtgattt 38890441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 10621488 - 10621366
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttg--tttcggttgcttgattatttcttgcttcacacatcaaatttgttattgg 123  Q
    |||||||||||||||||||||||| |||||||   || |||||||||||  ||| |||||||| |||||  |||||| |||||||| || ||||||||||    
T  10621488 cgttgttttctacttttggcttgtatttataa--ctttcatacactttggtttttggttgcttaattatcccttgctccacacatc-aagttgttattgg 10621392  T
Q  124 tgtaattttttccatcgaattcacaaca 151  Q
    ||| ||||||  ||||||||||||||||    
T  10621391 tgtgattttt--catcgaattcacaaca 10621366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 3859808 - 3859930
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||| |||||||| |||||||||||||| |||||||| | |||  |||  | |||||||| || ||||||||||||    
T  3859808 cgttgttttctacttttggcttgtattt-taattgtttcatacactttgttttggttgcttaactatcccttattccacacatc-aagttgttattggtg 3859905  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | |  ||||| |||||||||||||||    
T  3859906 tga-cttttcgatcgaattcacaaca 3859930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 51726966 - 51726847
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggt 124  Q
    |||||||||||||||||||||||| ||  |||||||||||||||||||| ||| |||||| |||||| |||||||  |||||||| || |||||||||||    
T  51726966 cgttgttttctacttttggcttgtatt--taattgttccatacactttgattttggttgcctgatta-ttcttgccccacacatc-aagttgttattggt 51726871  T
Q  125 gtaattttttccatcgaattcacaaca 151  Q
    || |||||   |||||||||| |||||    
T  51726870 gtgatttt---catcgaattcgcaaca 51726847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 6065754 - 6065633
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggt 124  Q
    |||||||||||||||||||||||| |||||||   || ||||||||||| ||| |||||||| |||||  |||||| |||||||| || |||||||||||    
T  6065754 cgttgttttctacttttggcttgtatttataa--ctttcatacactttgattttggttgcttaattatcccttgctccacacatc-aagttgttattggt 6065658  T
Q  125 gtaattttttccatcgaattcacaaca 151  Q
    || ||||||  |||||||||| |||||    
T  6065657 gtgattttt--catcgaattcgcaaca 6065633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 8183125 - 8183040
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttga 88  Q
    |||||||||||||| ||||||||  |   |||||||||||||| |||||||||||||||||||||||||| || ||| ||||||||||    
T  8183125 ttgtgttctctctttttttctcttgca--gttttctacttttgacttgtgtttataattgttccatacaccttattttggttgcttga 8183040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 159
Target Start/End: Complemental strand, 4103855 - 4103728
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    ||||||||| |||||||| | ||| ||||||| |  |||||||||||| ||||||||| |||| |||  |||||| ||| |||||| |||||||||||||    
T  4103855 cgttgttttttacttttgacatgtatttataact--tccatacactttttttcggttgtttgactatc-cttgctccacgcatcaagtttgttattggtg 4103759  T
Q  126 taattttttccatcgaattcacaacaggaatgtt 159  Q
    | |||||   |||||||||| ||||| |||||||    
T  4103758 tgatttt---catcgaattcgcaacatgaatgtt 4103728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 7606563 - 7606459
Alignment:
Q  27 gttgttttctactttt-ggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggt 124  Q
    |||||||||||||||| ||| ||| ||||  |||||||||||||||||| ||| |||||||||| ||| ||||||| |||||||| || |||||||||||    
T  7606563 gttgttttctactttttggcctgtattta--attgttccatacactttgattttggttgcttgactatctcttgctccacacatc-aagttgttattggt 7606467  T
Q  125 gtaatttt 132  Q
    ||| ||||    
T  7606466 gtattttt 7606459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 28412989 - 28412870
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||| ||||| |||||||   || ||||||| |||||| |||| |||||||||  |||||| |||||||| || ||||||||||||    
T  28412989 cgttgttttctacttttgacttgtatttataa--ctttcatacac-ttgttttggttacttgattatcccttgctccacacatc-aagttgttattggtg 28412894  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    |   ||||| ||||||||||||||||    
T  28412893 t--gttttttcatcgaattcacaaca 28412870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 111
Target Start/End: Original strand, 11170670 - 11170752
Alignment:
Q  28 ttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaa 111  Q
    |||||||||||||||||||||| ||  ||||| |||||||||||||| ||| ||||||||||||||  ||| || ||||||||||    
T  11170670 ttgttttctacttttggcttgtatt--taattattccatacactttgattttggttgcttgattatcccttactccacacatcaa 11170752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 54884366 - 54884427
Alignment:
Q  15 cttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtt 76  Q
    ||||||||||||  |||||||| |||||  ||||||||||||||||||||| ||||||||||    
T  54884366 cttttctctctcactgttttctgcttttatcttgtgtttataattgttccacacactttgtt 54884427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 132
Target Start/End: Complemental strand, 5522586 - 5522482
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggt 124  Q
    |||||||||||||||||||||||| |||||||   || | ||||||||| ||| |||||||||| |||  |||||| |||||||| || |||||||||||    
T  5522586 cgttgttttctacttttggcttgtatttataa--ctttcttacactttgattttggttgcttgactatcccttgctccacacatc-aagttgttattggt 5522490  T
Q  125 gtaatttt 132  Q
    || |||||    
T  5522489 gtgatttt 5522482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 151
Target Start/End: Complemental strand, 22114258 - 22114143
Alignment:
Q  31 ttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 129  Q
    ||||||||||||||||||| |||||||   || ||||||||||| ||| ||||||||||||||  |||||| |||||||| || ||| ||||||||| ||    
T  22114258 ttttctacttttggcttgtatttataa--ctttcatacactttgattttggttgcttgattatcccttgctccacacatc-aagttgctattggtgtgat 22114162  T
Q  130 tttttccatcgaattcacaaca 151  Q
    |||   |||||||||| |||||    
T  22114161 ttt---catcgaattcgcaaca 22114143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 151
Target Start/End: Original strand, 42992712 - 42992799
Alignment:
Q  61 ttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    ||||||||||||||||| |||||  |||||||  ||||||  ||||||||| ||||||||| |||| |||||   ||||||||||||||||    
T  42992712 ttccatacactttgttttggttgtctgattatcccttgctctacacatcaagtttgttattagtgtgatttt---catcgaattcacaaca 42992799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 151
Target Start/End: Complemental strand, 36871291 - 36871149
Alignment:
Q  2 tgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgctt 101  Q
    |||||||||||||  ||| ||||||| |||||||||  ||| |||||||||||||| |||  ||  ||| |||||| ||||||||||||| ||||||||     
T  36871291 tgtgttctctctttattt-tctctcgctgttttctatcttttgcttgtgtttataactgt--cacccac-ttgttttggttgcttgatta-ttcttgctc 36871197  T
Q  102 cacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    |||||||||| | | |||| ||||| ||||||| || |||||||||||||    
T  36871196 cacacatcaagtat-ttatcggtgtgatttttt-caacgaattcacaaca 36871149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 151
Target Start/End: Original strand, 25634173 - 25634294
Alignment:
Q  22 ctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttatt 121  Q
    |||| ||||||||||||||||| |||||||||||||||||| |  ||   |||| | ||||||||||||||| |||||| | ||||| || | | |||||    
T  25634173 ctcttgttgttttctacttttg-cttgtgtttataattgttacccac---ttgtattggttgcttgattattacttgctccccacattaagtat-ttatt 25634267  T
Q  122 ggtgtaattttttccatcgaattcacaaca 151  Q
    ||||| |||||   ||||||||||||||||    
T  25634268 ggtgtgatttt---catcgaattcacaaca 25634294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 6063404 - 6063283
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggt 124  Q
    |||||||||||||||||||||||| |||||||   || ||||| ||||| ||| |||||||| |||||  |||| | |||||||| || ||||||| |||    
T  6063404 cgttgttttctacttttggcttgtatttataa--ctttcatacgctttgattttggttgcttaattatcccttgttccacacatc-aagttgttatcggt 6063308  T
Q  125 gtaattttttccatcgaattcacaaca 151  Q
    || ||||||  |||||||||| |||||    
T  6063307 gtgattttt--catcgaattcgcaaca 6063283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 134
Target Start/End: Original strand, 7768855 - 7768962
Alignment:
Q  21 tctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttat 120  Q
    ||||||||||||||| |||||| ||||||||||||||||||| |  ||| ||  | | |||||||||||  ||| ||||| |||||||||||||  ||||    
T  7768855 tctctcgttgttttccactttt-gcttgtgtttataattgttacccaca-ttgatattggttgcttgat--ttttttgctccacacatcaaatt--ttat 7768948  T
Q  121 tggtgtaatttttt 134  Q
    | ||||||||||||    
T  7768949 tagtgtaatttttt 7768962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 42992536 - 42992594
Alignment:
Q  1 ttgtgttctctcttcttttct-ctctc-gttgttttctacttttggcttgtgtttataa 57  Q
    ||||||||||||| ||||||| ||| | ||||||||||||||||||||||| |||||||    
T  42992536 ttgtgttctctctccttttcttctcgccgttgttttctacttttggcttgtatttataa 42992594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 104; Significance: 7e-52; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 30480496 - 30480365
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||| ||    
T  30480496 ttgtgttctctcttcttttctctctcgctgttttctacttttggcttgtatttataattgttccatacactttgttttggttgcttgattattccttact 30480397  T
Q  101 tcacacatcaaatttgttattggtgtaatttt 132  Q
     ||||||||||||||||||||||||| |||||    
T  30480396 ccacacatcaaatttgttattggtgtcatttt 30480365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 14808103 - 14808237
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||   |||||    
T  14808103 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgcttgattatccgttgct 14808202  T
Q  101 tcacacatcaaatttgttattggtgtaattttttc 135  Q
     |||||||||| |||||||||||||| ||||||||    
T  14808203 ccacacatcaagtttgttattggtgtgattttttc 14808237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 15073053 - 15073202
Alignment:
Q  1 ttgtgttctctcttcttttctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgc 99  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||  |||||    
T  15073053 ttgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgttttgattgcttgactatcccttgc 15073152  T
Q  100 ttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    | |||||||||| |||||||||||||| ||||||  |||||||||| |||||    
T  15073153 tccacacatcaagtttgttattggtgtgattttt--catcgaattcgcaaca 15073202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 33541403 - 33541254
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||  ||| ||    
T  33541403 ttgtgttctctcttcctttctctctcgctgatttctacttttggcttgtgtttataattgttccatacactttattttgattgcttgattatcccttact 33541304  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaacag 152  Q
     |||||||||| |||||||||||||| ||||||   ||||||||||||||||    
T  33541303 ccacacatcaagtttgttattggtgtgattttt--gatcgaattcacaacag 33541254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 14419183 - 14419035
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||| | |||||||  ||||||    
T  14419183 ttgtgttctctcttcttttctctctcgctgttttctacttttgacttgtgtttataattgttccatacactttgttttggtttcctgattatcacttgct 14419084  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
     || ||||||| ||||||||||||||   ||||  ||||||||||||||||    
T  14419083 ccatacatcaagtttgttattggtgt--gttttctcatcgaattcacaaca 14419035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 35872446 - 35872301
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||  ||| ||    
T  35872446 ttgtgttctctcttcttttctctct---tgttttctacttttggcttgtgtttataatttttccatacactttattttggttgcttgattatcccttact 35872350  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    ||||||||||| ||||||||||||||   ||||  ||||||||||||||||    
T  35872349 tcacacatcaagtttgttattggtgt--gttttctcatcgaattcacaaca 35872301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 37214257 - 37214132
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||| |||| ||    
T  37214257 ttgtgttttctcttcctttctctctcgttgttttctacttttggcttgtgtttataattgttctatacactttgttttggttgcttgcttatctcttact 37214158  T
Q  101 tcacacatcaaatttgttattggtgt 126  Q
     || ||||||| ||||||||||||||    
T  37214157 ccatacatcaagtttgttattggtgt 37214132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 28251560 - 28251410
Alignment:
Q  1 ttgtgttctctcttctttt-ctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttg 98  Q
    ||||||||||||||||||| ||||| | |||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||| |||||||| ||||    
T  28251560 ttgtgttctctcttctttttctctcgctgttgttttctacttgtggcttgtgattataattgttccatacactttgttttggttgcctgattattccttg 28251461  T
Q  99 cttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    || |||||||| || ||||||||||||| ||||||| ||||||||||||||||    
T  28251460 ctccacacatc-aagttgttattggtgtgatttttt-catcgaattcacaaca 28251410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 36865879 - 36866002
Alignment:
Q  1 ttgtgttctctcttcttttct--ctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttg 98  Q
    ||||||||| |||| ||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||  ||||    
T  36865879 ttgtgttctgtctttttttctttctctcgttgttttctacttttggcttttgtttataattgttccatacactttgttttggttgcttgattatcacttg 36865978  T
Q  99 cttcacacatcaaatttgttattg 122  Q
    || |||||||||| ||||||||||    
T  36865979 ctccacacatcaagtttgttattg 36866002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 41383004 - 41383131
Alignment:
Q  1 ttgtgttctctcttc-ttttctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttg 98  Q
    ||||||||||||||| ||||||||| | |||||||||||||| |||||||||||||||||||||||||| ||||||||| | |||||||||||| |||||    
T  41383004 ttgtgttctctcttccttttctctcgctgttgttttctacttctggcttgtgtttataattgttccataaactttgttttgattgcttgattatctcttg 41383103  T
Q  99 cttcacacatcaaatttgttattggtgt 126  Q
    || |||||||||| ||||||||||||||    
T  41383104 ctccacacatcaagtttgttattggtgt 41383131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 15068323 - 15068472
Alignment:
Q  1 ttgtgttctctcttcttttctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgc 99  Q
    |||||||| | ||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||  ||||     
T  15068323 ttgtgttcacccttcttttctctcgctgttgttttctacttttggcttgtgtttgtaattgttccatacactttgttttggttgcttgactatcccttgt 15068422  T
Q  100 ttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    | |||||||||| |||||| ||||||| ||||||  |||||||||| |||||    
T  15068423 tccacacatcaagtttgttgttggtgtgattttt--catcgaattcgcaaca 15068472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 14477593 - 14477740
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||| ||||||||||||||||| | |||| |  ||||||||||||||||| |||||| |||||||||||||| |||||  |||||||  ||||||    
T  14477593 ttgtgttctttcttcttttctctctcgcttttttttt-ttttggcttgtgtttatgattgtttcatacactttgttttggttgtctgattatcacttgct 14477691  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
     |||||||||| |||||||||||||| ||||||  ||||||||||||||||    
T  14477692 ccacacatcaagtttgttattggtgtgattttt--catcgaattcacaaca 14477740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 13858478 - 13858331
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    |||||||||| |||  |||||||| |  ||||||||||||||||||||||||||||| |  |||||||||||||||| ||||||||||||||  ||||||    
T  13858478 ttgtgttctccctttctttctctcac--tgttttctacttttggcttgtgtttataact--tccatacactttgttttggttgcttgattatcacttgct 13858383  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaacagga 154  Q
     |||||||||| ||| |||||||||| ||||||  ||||||||| |||||||||    
T  13858382 ccacacatcaagtttcttattggtgtgattttt--catcgaatttacaacagga 13858331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 181821 - 181901
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttg 83  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  181821 ttgtgttctctcttcttttctc--tcgttgttttctacttttggcttgtgtttataattgtttcatacactttgttttggttg 181901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 3874367 - 3874487
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||||||||| ||||||||| |||| ||||||| |||||||| || ||||||||||||    
T  3874367 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttggttatctcttgctccacacatc-aagttgttattggtg 3874463  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | ||||||  || |||||||||||||    
T  3874464 tgattttt--caacgaattcacaaca 3874487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 25952863 - 25953010
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||  ||| |||||||  ||||||||||||||| ||||||||||||||| | |||||||||| ||| ||||||||||||||  ||| ||    
T  25952863 ttgtgttctctctttcttt-tctctcgccgttttctacttttggattgtgtttataattgcttcatacactttattttggttgcttgattatcactttct 25952961  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
     |||||||||| ||||||||||||||   ||||  ||||||||||||||||    
T  25952962 ccacacatcaagtttgttattggtgt--gttttctcatcgaattcacaaca 25953010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 133
Target Start/End: Original strand, 43530491 - 43530593
Alignment:
Q  28 ttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgta 127  Q
    |||||||||||||||||||||| ||||  ||||||||||||||||||||| |||||||||||||| ||||||| |||||||| || |||||||||||||     
T  43530491 ttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatctcttgctccacacatc-aagttgttattggtgtg 43530587  T
Q  128 attttt 133  Q
    ||||||    
T  43530588 attttt 43530593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 27827359 - 27827479
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||| ||||| ||||  ||||||||||||||||||||| |||||||||| |||  |||||| |||||||||| |||||||||||||    
T  27827359 cgttgttttctacttttgacttgtattta--attgttccatacactttgttttggttgcttgactatcccttgctccacacatcaagtttgttattggtg 27827456  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | |||||   |||||||||| |||||    
T  27827457 tgatttt---catcgaattcgcaaca 27827479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 22684614 - 22684491
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggt 124  Q
    |||||||||||||||||||||||| ||||  ||||||||||| |||||| ||| |||||| |||||||  |||||| |||||||||| || |||||||||    
T  22684614 cgttgttttctacttttggcttgtattta--attgttccataaactttgattttggttgcctgattatcccttgctccacacatcaagtt-gttattggt 22684518  T
Q  125 gtaattttttccatcgaattcacaaca 151  Q
    || |||||||||||||||||| |||||    
T  22684517 gtgattttttccatcgaattcgcaaca 22684491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 132
Target Start/End: Original strand, 31162555 - 31162683
Alignment:
Q  2 tgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgctt 101  Q
    |||||||||| || | || ||||||||||||||||||||||||||||| |||||||   ||||||||||||||||| |||| ||| |||||| ||||||     
T  31162555 tgtgttctcttttttcttttctctcgttgttttctacttttggcttgtatttataa--cttccatacactttgttttggttacttaattattacttgctc 31162652  T
Q  102 cacacatcaaatttgttattggtgtaatttt 132  Q
    |||||||||| | | |||||||||| |||||    
T  31162653 cacacatcaagtattttattggtgtgatttt 31162683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 27911439 - 27911551
Alignment:
Q  19 tctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgtt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||| | | |||||  |||||| |||||||||| ||| ||    
T  27911439 tctctctcgttgttttctacttttggcttgtgtttataattgttcca-acactttgttttagtttc-taattatcacttgctccacacatcaagtttttt 27911536  T
Q  119 attggtgtaattttt 133  Q
    |||||||| ||||||    
T  27911537 attggtgtgattttt 27911551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 27957858 - 27957970
Alignment:
Q  19 tctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgtt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||| | | |||||  |||||| |||||||||| ||| ||    
T  27957858 tctctctcgttgttttctacttttggcttgtgtttataattgttcca-acactttgttttagtttc-taattatcacttgctccacacatcaagtttttt 27957955  T
Q  119 attggtgtaattttt 133  Q
    |||||||| ||||||    
T  27957956 attggtgtgattttt 27957970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 152
Target Start/End: Original strand, 27829670 - 27829791
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||| ||| | ||||  ||||||||||||||||||||| |||||||||| |||  |||||| |||||||||| |||||||||||||    
T  27829670 cgttgttttctacttttgacttatattta--attgttccatacactttgttttggttgcttgactatcccttgctccacacatcaagtttgttattggtg 27829767  T
Q  126 taattttttccatcgaattcacaacag 152  Q
    | |||||   |||||||||| ||||||    
T  27829768 tgatttt---catcgaattcgcaacag 27829791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 30 - 151
Target Start/End: Original strand, 18811085 - 18811202
Alignment:
Q  30 gttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaa 128  Q
    |||||||||||||||||||| ||||  |||||||||||||||||| ||| |||||||||||||| ||||||| |||||||| || ||||||||||||| |    
T  18811085 gttttctacttttggcttgtattta--attgttccatacactttgattttggttgcttgattatctcttgctccacacatc-aagttgttattggtgtga 18811181  T
Q  129 ttttttccatcgaattcacaaca 151  Q
    |||||  |||||||||| |||||    
T  18811182 ttttt--catcgaattcgcaaca 18811202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 3883556 - 3883436
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||||||||| ||||||||||||||   ||||| |||||||| || ||||||||| ||    
T  3883556 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatcctttgctccacacatc-aagttgttattgatg 3883460  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | ||||||  |||||||||| |||||    
T  3883459 tgattttt--catcgaattcgcaaca 3883436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 28283182 - 28283062
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| |||||  || || |||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||    
T  28283182 cgttgttttctacttttggcttgtatttat--ttttttcatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtg 28283086  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | ||||||  |||||||||| |||||    
T  28283085 tgattttt--catcgaattcgcaaca 28283062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 4424392 - 4424512
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggt 124  Q
    |||||||||||||||||||||||| ||  |||||||||||||||||||| ||| ||||||||||||||  |||||| |||||| | || |||||||||||    
T  4424392 cgttgttttctacttttggcttgtatt--taattgttccatacactttgtttttggttgcttgattatcccttgctccacaca-ccaagttgttattggt 4424488  T
Q  125 gtaattttttccatcgaattcacaaca 151  Q
    || |||||   ||||||||||||||||    
T  4424489 gtgatttt---catcgaattcacaaca 4424512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 151
Target Start/End: Complemental strand, 2468122 - 2467979
Alignment:
Q  2 tgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgctt 101  Q
    |||||||||||||  ||| ||||||||||||||||| |||||  ||||| |||||| |  ||| |||||||||||| |||||||||| |||  ||||||     
T  2468122 tgtgttctctctttcttt-tctctcgttgttttctaattttgttttgtgattataact--tccctacactttgttttggttgcttgactatcacttgctc 2468026  T
Q  102 cacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    |||||||||| ||| |||||||||| |||||   ||||||||||||||||    
T  2468025 cacacatcaagtttattattggtgtgatttt---catcgaattcacaaca 2467979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 27106872 - 27106770
Alignment:
Q  21 tctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttat 120  Q
    ||||||||||||||||||||||| || ||| |||||| |  |||||||||||||||| |||||||||| |||  |||||| |||||||||| ||||||||    
T  27106872 tctctcgttgttttctacttttgtct-gtgattataact--tccatacactttgttttggttgcttgactatcccttgctccacacatcaagtttgttat 27106776  T
Q  121 tggtgt 126  Q
    ||||||    
T  27106775 tggtgt 27106770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 1225509 - 1225644
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    |||||||||||||||||||||||| |  ||||||||||||||| ||||||||||||||||          ||||||| ||||||||||||||| |||| |    
T  1225509 ttgtgttctctcttcttttctctcgc--tgttttctacttttgacttgtgtttataattg----------tttgttttggttgcttgattattccttgtt 1225596  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcaca 148  Q
     |||||||||| | ||||||||| || ||| ||| |||| ||||||||    
T  1225597 ccacacatcaagtatgttattggcgtgattattttcatccaattcaca 1225644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 153
Target Start/End: Complemental strand, 5372155 - 5372023
Alignment:
Q  21 tctctcgttgttttctacttttggcttgtgtttataattgttccatacacttt-gtttcggttgcttgattatttcttgcttcacacatcaaatttgtta 119  Q
    |||||| ||||||||||||||||||||| |||||||| ||||||||||| |||  |||  ||||||||| |||   ||||| |||||||||| |||||||    
T  5372155 tctctcattgttttctacttttggcttgagtttataactgttccatacattttaattttagttgcttgaatatccattgctccacacatcaagtttgtta 5372056  T
Q  120 ttggtgtaattttttccatcgaattcacaacagg 153  Q
    ||| ||| |||||||  |||||||||| ||||||    
T  5372055 ttgatgtgatttttt-tatcgaattcaaaacagg 5372023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 152
Target Start/End: Original strand, 15809592 - 15809712
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||| ||||| ||||| ||||  |||||| |||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||    
T  15809592 cgttgttttctatttttgccttgtattta--attgtttcatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtg 15809688  T
Q  126 taattttttccatcgaattcacaacag 152  Q
    | |||||   |||||||||| ||||||    
T  15809689 tgatttt---catcgaattcgcaacag 15809712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 15956300 - 15956443
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    |||| |||||||||||||||||||  ||||||||||||||| |  ||||| |||||| | |  |||||||||||||| ||||| |||| |||  ||||||    
T  15956300 ttgtattctctcttcttttctctc--gttgttttctactttcgt-ttgtgattataacttt--catacactttgttttggttgtttgactatcccttgct 15956394  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
     |||||||||| |||||||||| ||| ||||||  ||||||||||||||||    
T  15956395 ccacacatcaagtttgttattgatgtgattttt--catcgaattcacaaca 15956443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 152
Target Start/End: Original strand, 18813259 - 18813377
Alignment:
Q  30 gttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaa 128  Q
    |||||||||||||||||||| ||  |||||||||||||||||||| ||| |||||||||||||| |||||||  ||| ||| || ||||||||||||| |    
T  18813259 gttttctacttttggcttgtatt--taattgttccatacactttgattttggttgcttgattatctcttgctctacatatc-aagttgttattggtgtga 18813355  T
Q  129 ttttttccatcgaattcacaacag 152  Q
    |||||  |||||||||| ||||||    
T  18813356 ttttt--catcgaattcgcaacag 18813377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 26 - 133
Target Start/End: Original strand, 43082347 - 43082451
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| |||||||   || |||||||||||||| |||||||| |||||  |||||| |||||||| || ||||||||||||    
T  43082347 cgttgttttctacttttggcttgtatttataa--ctttcatacactttgttttggttgcttaattatcccttgctccacacatc-aagttgttattggtg 43082443  T
Q  126 taattttt 133  Q
    | ||||||    
T  43082444 tgattttt 43082451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 609109 - 609230
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttg--tttcggttgcttgattatttcttgcttcacacatcaaatttgttattgg 123  Q
    |||||||||||||||||||||||| ||  |||||||| |||||||||||  ||| |||||||||||||| ||||||| ||| |||| || ||||||||||    
T  609109 cgttgttttctacttttggcttgtatt--taattgtttcatacactttgttttttggttgcttgattatctcttgctccacgcatc-aagttgttattgg 609205  T
Q  124 tgtaattttttccatcgaattcacaaca 151  Q
    ||  |||||   ||||||||||||||||    
T  609206 tgcgatttt---catcgaattcacaaca 609230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 41385089 - 41385180
Alignment:
Q  4 tgttctctcttct-tttctctctc-gttgttttctacttttggcttgtgtttataattgttccatacac-tttgtttcggttgcttgattat 92  Q
    ||||||||||||  |||||||| | |||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||    
T  41385089 tgttctctcttccatttctctcgctgttgttttatacttttggcttgtgtttataattgttccatacacttttgttttggttgtttgattat 41385180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 126
Target Start/End: Original strand, 44721217 - 44721314
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||| ||||| ||||  ||| ||||||||||||||||| ||||||||||||||  ||| || |||||||| || ||||||||||||    
T  44721217 cgttgttttctacttttgacttgtattta--attattccatacactttgttttggttgcttgattatcccttactccacacatc-aagttgttattggtg 44721313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 151
Target Start/End: Complemental strand, 15185689 - 15185564
Alignment:
Q  21 tctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttat 120  Q
    |||||||||||||||||||||||  || || |||||| |  |||||||||||||||| |||||||||| |||  ||| || |||||||||| ||||||||    
T  15185689 tctctcgttgttttctacttttgt-ttatgattataact--tccatacactttgttttggttgcttgactatcccttactccacacatcaagtttgttat 15185593  T
Q  121 tggtgtaattttttccatcgaattcacaaca 151  Q
    || ||| ||||||  || |||||||||||||    
T  15185592 tgatgtgattttt--caccgaattcacaaca 15185564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 151
Target Start/End: Original strand, 21482653 - 21482798
Alignment:
Q  2 tgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactt--tgtttcggttgcttgattatttcttgc 99  Q
    |||||||||||||  ||| ||||||| |||||||||||||| | ||||| ||||||   ||||||||||||  | ||| |||||||| |||||  |||||    
T  21482653 tgtgttctctctttcttt-tctctcgctgttttctactttt-gtttgtgattataa--cttccatacactttattttttggttgcttcattatcacttgc 21482748  T
Q  100 ttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    | |||||||||| ||| |||||||||| ||||||  ||||||||||||||||    
T  21482749 tccacacatcaagtttattattggtgtgattttt--catcgaattcacaaca 21482798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 152
Target Start/End: Complemental strand, 24873161 - 24873038
Alignment:
Q  26 cgttgttttctac-ttttggcttgtgtttataattgttccatacactttgtttc-ggttgcttgattatttcttgcttcacacatcaaatttgttattgg 123  Q
    ||||||||||||| ||||||||||| ||||||| | |  ||||||||||||||  |||||||| |||||  |||||| |||||||||| || ||||||||    
T  24873161 cgttgttttctaccttttggcttgtatttataacttt--catacactttgtttttggttgcttaattatcccttgctccacacatcaagtt-gttattgg 24873065  T
Q  124 tgtaattttttccatcgaattcacaacag 152  Q
    ||| ||||||  |||||||||||||||||    
T  24873064 tgtgattttt--catcgaattcacaacag 24873038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 32339683 - 32339803
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggt 124  Q
    |||| ||||||||||||| ||||| ||||  |||||||||||||||||| ||| ||||||||||||||  |||||  |||||||| || |||||||||||    
T  32339683 cgttattttctacttttgacttgtattta--attgttccatacactttgattttggttgcttgattatcccttgccccacacatc-aagttgttattggt 32339779  T
Q  125 gtaattttttccatcgaattcacaaca 151  Q
    || |||||   |||||||||| |||||    
T  32339780 gtgatttt---catcgaattcgcaaca 32339803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 151
Target Start/End: Complemental strand, 3005572 - 3005486
Alignment:
Q  61 ttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    ||||||||||||||||| ||||| ||||||||| |||||| |||||||||| | | |||||||||| |||||   ||||||||||||||||    
T  3005572 ttccatacactttgttt-ggttgtttgattattacttgctccacacatcaagtattttattggtgtgatttt---catcgaattcacaaca 3005486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 133
Target Start/End: Original strand, 43079976 - 43080080
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||| ||||| |||||||   || |||||||||||||| |||||||| |||||   ||||| |||||||| || ||||||||||||    
T  43079976 cgttgttttctacttttgacttgtatttataa--ctttcatacactttgttttggttgcttaattatccattgctccacacatc-aagttgttattggtg 43080072  T
Q  126 taattttt 133  Q
    | ||||||    
T  43080073 tgattttt 43080080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 151
Target Start/End: Original strand, 21480845 - 21480990
Alignment:
Q  2 tgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttg--tttcggttgcttgattatttcttgc 99  Q
    |||||||||||||  ||| |||||||||||||||| ||||| | ||||| ||||||   ||||||||||||||  ||| ||||| |||||| |  ||| |    
T  21480845 tgtgttctctctttcttt-tctctcgttgttttcttctttt-gtttgtgattataa--cttccatacactttgttttttggttgtttgattgtcacttac 21480940  T
Q  100 ttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    | |||||||||| ||| |||||||||| ||||||  ||||||||||||||||    
T  21480941 tccacacatcaagtttattattggtgttattttt--catcgaattcacaaca 21480990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 31578256 - 31578216
Alignment:
Q  21 tctctcgttgttttctacttttggcttgtgtttataattgtt 62  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  31578256 tctctcgttgttttctactttt-gcttgtgtttataattgtt 31578216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 104; Significance: 7e-52; HSPs: 82)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 2949227 - 2949079
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||  ||||||    
T  2949227 ttgtgttctctcttcctttctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttattttggttgcttgattatcccttgct 2949128  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
     |||||||||| |||||||||||||| ||||||  ||||||||||||||||    
T  2949127 ccacacatcaagtttgttattggtgtgattttt--catcgaattcacaaca 2949079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 4131370 - 4131221
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  4131370 ttgtgttctctgttcttttctctctcgttgttttctatttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatctcttgct 4131271  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
     | |||||||| |||||||||||||| | ||||| |||||||||| |||||    
T  4131270 ccgcacatcaagtttgttattggtgtgagttttt-catcgaattcgcaaca 4131221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 3 - 156
Target Start/End: Original strand, 18839876 - 18840027
Alignment:
Q  3 gtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttc 102  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||| |    
T  18839876 gtgttctctcttcttttctctctcgctgttttctagttttggcttgtgtttataattgttccatacactttgtttcgattacttgattattccttgctcc 18839975  T
Q  103 acacatcaaatttgttattggtgtaattttttccatcgaattcacaacaggaat 156  Q
    ||||||||| |||||||||||||| ||||||  |||||||||| ||||| ||||    
T  18839976 acacatcaagtttgttattggtgtgattttt--catcgaattcgcaacaagaat 18840027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 50248565 - 50248415
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||  ||| ||    
T  50248565 ttgtgttctctcttcctttctctctcgttgttttcaacttttggcttgtggttataattgttccatacactttgttttggttgcttgattatcccttact 50248466  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaacagg 153  Q
     ||||||||||||||||||||||||| |||| |  ||||||||||||||||||    
T  50248465 ccacacatcaaatttgttattggtgtgatttat--catcgaattcacaacagg 50248415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 50078787 - 50078635
Alignment:
Q  1 ttgtgttctctcttctttt---ctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttctt 97  Q
    |||| ||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  50078787 ttgttttctctcttctttttctctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattattcctt 50078688  T
Q  98 gcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    ||| |||||||||| |||||||||||||| ||||| | |||||||||| |||||    
T  50078687 gctccacacatcaagtttgttattggtgtgattttct-catcgaattcgcaaca 50078635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 14097964 - 14097838
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgc 99  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||    
T  14097964 ttgtgttctctcttcctttctctctcgttgttttctacttttgacttgtgtttataattgttccatacactttgattttggttgcttgattatctcttgc 14097865  T
Q  100 ttcacacatcaaatttgttattggtgt 126  Q
    |||||||||||| ||||||||||||||    
T  14097864 ttcacacatcaagtttgttattggtgt 14097838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 11457470 - 11457328
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||| |||||| |||||||  ||||||    
T  11457470 ttgtgttctctcttcttttctctctcgctgttttctacttttggcttgtgtttaaaattgttccatatactttgttttggttgcctgattatcacttgct 11457371  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattc 145  Q
    ||||||||||| |||||||||||||| ||||||  ||||||||||    
T  11457370 tcacacatcaagtttgttattggtgtgattttt--catcgaattc 11457328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 25251269 - 25251123
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||| |||  ||||||    
T  25251269 ttgtgttctctcttcctttctctctcgttgttttctacttttggcttgtgattataattgtttcatacactttgttttggttgcttgactatcccttgct 25251170  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaa 149  Q
     |||||||||| |||||||||||||| ||||||  ||||||||||||||    
T  25251169 ccacacatcaagtttgttattggtgtgattttt--catcgaattcacaa 25251123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 17319173 - 17319321
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| | ||||||||||||||||| ||||| ||||||||| ||| ||    
T  17319173 ttgtgttctctcttcttttctctctcgctattttctacttttggcttgtgtttataactattccatacactttgttttggttgtttgattattccttact 17319272  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
     ||||||||||||||||||||||||  ||||||  ||||||||||||||||    
T  17319273 ccacacatcaaatttgttattggtgcgattttt--catcgaattcacaaca 17319321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 12302500 - 12302347
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgc 99  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||| | |||||||  |||||    
T  12302500 ttgtgttctctcttcttttctctctcgttgttttctacttttgacttgtgtttataattgttccatacactttgattttggtttcctgattatcacttgc 12302401  T
Q  100 ttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaacagg 153  Q
    | |||||||||| ||||||||||||||  ||||||  ||||||||| |||||||    
T  12302400 tccacacatcaagtttgttattggtgtgtttttttttatcgaattcgcaacagg 12302347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 31425010 - 31424878
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||| ||||||  |||||||||| |||| ||||||    
T  31425010 ttgtgttctctcttcttttctctctcgctgttttctacttttgacttgtgtttataattgtcccatacattttgttatggttgcttgagtattccttgct 31424911  T
Q  101 tcacacatcaaatttgttattggtgtaattttt 133  Q
     |||||||||| |||||||||||||| ||||||    
T  31424910 ccacacatcaagtttgttattggtgtgattttt 31424878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 47906556 - 47906704
Alignment:
Q  1 ttgtgttctctcttcttttctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgc 99  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||| ||||||    
T  47906556 ttgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacactttggtttggttgcttgattatctcttgc 47906655  T
Q  100 ttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    | |||||||| || ||||||||||||| ||||||  |||||||||| |||||    
T  47906656 tccacacatc-aagttgttattggtgtgattttt--catcgaattcgcaaca 47906704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 18307395 - 18307543
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||   |||||    
T  18307395 ttgtgttctctcttcctttctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcctaattatcatttgct 18307494  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
     |||||||||| |||||||||| ||||  ||||  |||||||||| |||||    
T  18307495 ccacacatcaagtttgttattgatgta--ttttctcatcgaattcgcaaca 18307543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 31490198 - 31490345
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    |||||||||||||| |||||||||||  ||||||||||||||| |||||||||||||||||| |||||||||| ||| |||||||||||||| |||||||    
T  31490198 ttgtgttctctcttattttctctctccctgttttctacttttgacttgtgtttataattgtttcatacactttattttggttgcttgattatctcttgct 31490297  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
     |||||||||| |||| ||||||||| ||||||  |||||||||| |||||    
T  31490298 ccacacatcaagtttg-tattggtgtgattttt--catcgaattcgcaaca 31490345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 4 - 126
Target Start/End: Original strand, 13215373 - 13215495
Alignment:
Q  4 tgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttca 103  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||  |||||| ||    
T  13215373 tgttctctcttcctttctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgtttgactatcccttgctcca 13215472  T
Q  104 cacatcaaatttgttattggtgt 126  Q
    |||||||| ||| ||||||||||    
T  13215473 cacatcaagtttattattggtgt 13215495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 27336935 - 27336781
Alignment:
Q  1 ttgtgttctctcttc-ttttctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttctt 97  Q
    ||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||  |||    
T  27336935 ttgtgttctctcttccttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatccctt 27336836  T
Q  98 gcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaacag 152  Q
    ||| |||||||||| |||||||||| ||| ||||||  || ||||||||||||||    
T  27336835 gctccacacatcaagtttgttattgatgtgatttttctcaacgaattcacaacag 27336781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 28207063 - 28206912
Alignment:
Q  1 ttgtgttctctcttctttt-ctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttctt 97  Q
    ||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||  |||    
T  28207063 ttgtgttctctcttctttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcactt 28206964  T
Q  98 gcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    ||| |||||||||| ||||||||||||||   ||||  ||||||||||||||||    
T  28206963 gctccacacatcaagtttgttattggtgt--gttttctcatcgaattcacaaca 28206912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 23816172 - 23816323
Alignment:
Q  1 ttgtgttctctctt---cttttctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttct 96  Q
    ||||||||||||||   |||||||||| | ||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||| ||    
T  23816172 ttgtgttctctctttttcttttctctcgctgttgttttctacttttgacttgtgattataattgttccatacactttgttttggttgcttgattattcct 23816271  T
Q  97 tgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    |||| |||||||| || ||||||||||||| ||||||  |||||||||| |||||    
T  23816272 tgctccacacatc-aagttgttattggtgtgattttt--catcgaattcgcaaca 23816323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 27339126 - 27338973
Alignment:
Q  1 ttgtgttctctcttc-ttttctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttctt 97  Q
    ||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||  |||    
T  27339126 ttgtgttctctcttccttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatccctt 27339027  T
Q  98 gcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    | | |||||||||| |||||||||| ||| ||||||  || |||||||||||||    
T  27339026 gttccacacatcaagtttgttattgatgtgatttttctcaacgaattcacaaca 27338973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 3579560 - 3579431
Alignment:
Q  19 tctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgtt 118  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||  |||||| |||||||||| ||||||    
T  3579560 tctctctctctgttttctacttttggcttgtgtttataattgttccatacactttattttggttgcctgattatcacttgctccacacatcaagtttgtt 3579461  T
Q  119 attggtgtaattttttccatcgaattcacaaca 151  Q
    |||||||   | |||| ||||||||||||||||    
T  3579460 attggtg---tgtttttcatcgaattcacaaca 3579431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 39462805 - 39462956
Alignment:
Q  1 ttgtgttctctcttctttt-ctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttctt 97  Q
    ||||||||||||||||||| ||||| | ||||||||||| |||||||||||||||||||||||||||||||||||| ||| | |||| |||||||  |||    
T  39462805 ttgtgttctctcttctttttctctcgctgttgttttctaattttggcttgtgtttataattgttccatacactttgattttgattgcctgattatccctt 39462904  T
Q  98 gcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    ||| |||||||||| |||||||||||||| ||||||  |||||||||| |||||    
T  39462905 gctccacacatcaagtttgttattggtgtgattttt--catcgaattcgcaaca 39462956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 15 - 151
Target Start/End: Original strand, 47451930 - 47452065
Alignment:
Q  15 cttttctctc-tcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaat 113  Q
    |||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||  ||||||  |||||||||||    
T  47451930 cttttctctcgttgttgctttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgactatcccttgctcgacacatcaaat 47452029  T
Q  114 ttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    ||||||||| ||| ||||||  ||| ||||||||||||    
T  47452030 ttgttattgatgtgattttt--cattgaattcacaaca 47452065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 6995662 - 6995540
Alignment:
Q  27 gttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 126  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| | |||||||| |||  |||||| |||||||||| ||||||||||||||    
T  6995662 gttgttttctacttttggcttgtgtttatagttgttccatacactttgttttgattgcttgactatcccttgctccacacatcaagtttgttattggtgt 6995563  T
Q  127 aattttttccatcgaattcacaaca 151  Q
     ||||||  |||||||||| |||||    
T  6995562 gattttt--catcgaattcgcaaca 6995540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 21 - 148
Target Start/End: Complemental strand, 9241062 - 9240937
Alignment:
Q  21 tctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttat 120  Q
    ||||||| |||||||||||||||| |||| |||||||||||| |||||||||||||| ||||||||||||||  |||||| ||||| |||| ||||||||    
T  9241062 tctctcgctgttttctacttttggtttgtatttataattgtttcatacactttgttttggttgcttgattatcacttgctccacacttcaagtttgttat 9240963  T
Q  121 tggtgtaattttttccatcgaattcaca 148  Q
    |||||| |||||||  ||||||||||||    
T  9240962 tggtgtgatttttt--atcgaattcaca 9240937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 40134231 - 40134387
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattattt--cttg 98  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||| | ||||||   ||||||||||||||||| |||||| ||||||| |  ||||    
T  40134231 ttgtgttctctattctttt-tctctcgttgttttctacttttggcttgagattataa--cttccatacactttgttttggttgcctgattatatcacttg 40134327  T
Q  99 cttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaacaggaatgtta 160  Q
    || |||||||||| |||||||||| ||| ||||||  ||||||||||||||||| |||||||    
T  40134328 ctccacacatcaagtttgttattgatgtgattttt--catcgaattcacaacagtaatgtta 40134387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 21 - 151
Target Start/End: Complemental strand, 25248526 - 25248398
Alignment:
Q  21 tctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttat 120  Q
    ||||||| ||||||||||||||| ||| |||||||||||||| |||||||||||||| |||||||||| |||| ||| || |||||||||| ||||||||    
T  25248526 tctctcgctgttttctacttttgacttttgtttataattgtttcatacactttgttttggttgcttgactattccttactccacacatcaagtttgttat 25248427  T
Q  121 tggtgtaattttttccatcgaattcacaaca 151  Q
    || ||| ||||||  ||||||||||||||||    
T  25248426 tgttgtgattttt--catcgaattcacaaca 25248398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 17324378 - 17324484
Alignment:
Q  19 tctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgtt 118  Q
    ||||||||  ||||||||||||||||||||||||||||||| || |||||||||||||  ||||||||||||||| |||||| |||||||||| ||||||    
T  17324378 tctctctcactgttttctacttttggcttgtgtttataattttttcatacactttgttatggttgcttgattattccttgctccacacatcaagtttgtt 17324477  T
Q  119 attggtg 125  Q
    |||||||    
T  17324478 attggtg 17324484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 50307540 - 50307389
Alignment:
Q  1 ttgtgttctctcttctttt-ctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttctt 97  Q
    |||||||||||||| |||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||  |||    
T  50307540 ttgtgttctctcttatttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatccctt 50307441  T
Q  98 gcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    ||| || ||||||| ||| |||||||||| ||||||  |||||||||| |||||    
T  50307440 gctccagacatcaagtttattattggtgtgattttt--catcgaattcccaaca 50307389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 16429244 - 16429387
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    |||||||||||||||||||||||| |  ||||||| |||||||| |||||||||||| |  |||||||||||||||| |||||| |||||||  ||||||    
T  16429244 ttgtgttctctcttcttttctctcgc--tgttttc-acttttggtttgtgtttataact--tccatacactttgttttggttgcctgattatcacttgct 16429338  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
     |||||||||| |||||||||||||| ||||||  ||||||||||||||||    
T  16429339 ccacacatcaagtttgttattggtgtgattttt--catcgaattcacaaca 16429387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 9 - 151
Target Start/End: Complemental strand, 31422847 - 31422706
Alignment:
Q  9 tctcttcttttctctctcgttgttttctacttttggcttgtg-tttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacaca 107  Q
    ||||||||||||||||||| ||||||||||||||| |||||| ||||||||| |||| |||||||| |||  |||| ||||||||| |||||| ||||||    
T  31422847 tctcttcttttctctctcgctgttttctacttttgacttgtgttttataattattccgtacactttattttagttgattgattattccttgctccacaca 31422748  T
Q  108 tcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    |||| |||||||||| ||| ||||||  |||||||||| |||||    
T  31422747 tcaagtttgttattgatgtgattttt--catcgaattcgcaaca 31422706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 28998248 - 28998117
Alignment:
Q  1 ttgtgttctctcttcttttct---ctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttc---ggttgcttgattattt 94  Q
    |||||||||||||| | ||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||   |||||| |||||||      
T  28998248 ttgtgttctctcttttcttcttttctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgattctttggttgcctgattatca 28998149  T
Q  95 cttgcttcacacatcaaatttgttattggtgt 126  Q
    |||||| |||||||||| ||||| ||||||||    
T  28998148 cttgctccacacatcaagtttgtcattggtgt 28998117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 29003964 - 29003833
Alignment:
Q  1 ttgtgttctctcttcttttct---ctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttc---ggttgcttgattattt 94  Q
    |||||||||||||| | ||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||   |||||| |||||||      
T  29003964 ttgtgttctctcttttcttcttttctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgattctttggttgcctgattatca 29003865  T
Q  95 cttgcttcacacatcaaatttgttattggtgt 126  Q
    |||||| |||||||||| ||||| ||||||||    
T  29003864 cttgctccacacatcaagtttgtcattggtgt 29003833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 152
Target Start/End: Original strand, 39932398 - 39932515
Alignment:
Q  31 ttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 130  Q
    ||||||||||||||||||| ||||||| |  |||||||||||||||| ||||||||||||||  |||||| |||||||||| |||||||||||||| |||    
T  39932398 ttttctacttttggcttgtatttataact--tccatacactttgttttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgatt 39932495  T
Q  131 ttttccatcgaattcacaacag 152  Q
    |||  |||||||||||||||||    
T  39932496 ttt--catcgaattcacaacag 39932515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 21 - 151
Target Start/End: Complemental strand, 14183579 - 14183455
Alignment:
Q  21 tctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttat 120  Q
    |||||||||||||||| |||||| ||||||||||||| |  |||||||||||||||| ||||||||||||||| ||||||||||||||||| | | ||||    
T  14183579 tctctcgttgttttcttcttttg-cttgtgtttataact--tccatacactttgttttggttgcttgattattacttgcttcacacatcaagtattttat 14183483  T
Q  121 tggtgtaattttttccatcgaattcacaaca 151  Q
    |||||| ||||||   |||||||||||||||    
T  14183482 tggtgtgattttt---atcgaattcacaaca 14183455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 30 - 159
Target Start/End: Original strand, 30780361 - 30780490
Alignment:
Q  30 gttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct--tcacacatcaaatttgttattggtgta 127  Q
    ||||||||||||||  ||||||||||||||||| |||||||||||||| ||||||||||||||| ||| ||   |||||||||| ||||||||||||||     
T  30780361 gttttctacttttgatttgtgtttataattgtttcatacactttgttttggttgcttgattattccttactccacacacatcaagtttgttattggtgtg 30780460  T
Q  128 attttttccatcgaattcacaacaggaatgtt 159  Q
    | ||||  ||||||||||||||||||| ||||    
T  30780461 agtttt--catcgaattcacaacaggattgtt 30780490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 38925476 - 38925351
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttg--tttcggttgcttgattatttcttg 98  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||| ||||||||||||||||  ||| |||||| |||||||  |||     
T  38925476 ttgtgttctctcttcttttctctca--ttgttttctacttttggcttgtgtttataaatgttccatacactttgatttttggttgcctgattatcactta 38925379  T
Q  99 cttcacacatcaaatttgttattggtgt 126  Q
    || |||||||||| ||| ||||||||||    
T  38925378 ctccacacatcaagtttattattggtgt 38925351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 50076667 - 50076563
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||  ||||||| ||||||  |||||    
T  50076667 ttgtgttctctcttctttt-tctctcgttgttttctacttttaacttgtgtttataattgttccatacactttgttttagttgctttattattcattgct 50076569  T
Q  101 tcacac 106  Q
     |||||    
T  50076568 ccacac 50076563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 13447236 - 13447117
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||||||||| |||||||||||||| ||||||| |||||||| || ||||||||||||    
T  13447236 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatctcttgctccacacatc-aagttgttattggtg 13447140  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | |||||   |||||||||| |||||    
T  13447139 tgatttt---catcgaattcgcaaca 13447117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 41647206 - 41647355
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgc 99  Q
    ||||||||||||||| ||||||||| | ||||||||||||||| ||||||||||||||| || ||||||||||| ||| |||||  |||||||  |||||    
T  41647206 ttgtgttctctcttcctttctctcttgctgttttctacttttgacttgtgtttataattatttcatacactttgattttggttgtctgattatcacttgc 41647305  T
Q  100 ttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    | | |||||||| ||||||||||||||   ||||  ||||||||||||||||    
T  41647306 tccgcacatcaagtttgttattggtgt--gttttctcatcgaattcacaaca 41647355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 26 - 132
Target Start/End: Complemental strand, 15294797 - 15294694
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||||||||| |||||||||||||| ||||||| |||||||| || ||||||||||||    
T  15294797 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatctcttgctccacacatc-aagttgttattggtg 15294701  T
Q  126 taatttt 132  Q
    | |||||    
T  15294700 tgatttt 15294694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 15823832 - 15823968
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttg---ttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttct 96  Q
    ||||||||||||||||||| ||||| ||||   ||||||||||||| |||||| ||||||||||||||||||||||| ||| |||||| ||||||   ||    
T  15823832 ttgtgttctctcttcttttttctcttgttgttgttttctacttttgccttgtgattataattgttccatacactttgattttggttgcctgattacccct 15823931  T
Q  97 tgcttcacacatcaaatttgttattggtgtaattttt 133  Q
    | || |||||||||| |||||||||||||| ||||||    
T  15823932 tactccacacatcaagtttgttattggtgtgattttt 15823968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 152
Target Start/End: Complemental strand, 9459397 - 9459276
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||||| | |  |||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||    
T  9459397 cgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtg 9459301  T
Q  126 taattttttccatcgaattcacaacag 152  Q
    | ||||||  |||||||||||||||||    
T  9459300 tgattttt--catcgaattcacaacag 9459276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 152
Target Start/End: Complemental strand, 9463224 - 9463103
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||||| | |  |||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||    
T  9463224 cgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtg 9463128  T
Q  126 taattttttccatcgaattcacaacag 152  Q
    | ||||||  |||||||||||||||||    
T  9463127 tgattttt--catcgaattcacaacag 9463103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 133
Target Start/End: Original strand, 51750357 - 51750461
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||    
T  51750357 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtg 51750453  T
Q  126 taattttt 133  Q
    | ||||||    
T  51750454 tgattttt 51750461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 10399791 - 10399669
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggt 124  Q
    |||||||||||||||||||||||| ||||  |||||||||||||||||| ||| |||||||||||||| ||||||| |||||||| || |||||||||||    
T  10399791 cgttgttttctacttttggcttgtattta--attgttccatacactttgattttggttgcttgattatctcttgctccacacatc-aagttgttattggt 10399695  T
Q  125 gtaattttttccatcgaattcacaaca 151  Q
    || || |||| |||||||||| |||||    
T  10399694 gtgatatttt-catcgaattcgcaaca 10399669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 31735484 - 31735365
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||| ||||||||||| ||||  ||||||||||||||||||||| |||||||||||||| ||||||| |||||||| || ||||||||||||    
T  31735484 cgttgttttcta-ttttggcttgtattta--attgttccatacactttgttttggttgcttgattatctcttgctccacacatc-aagttgttattggtg 31735389  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    |||||| |  |||||||||| |||||    
T  31735388 taatttct--catcgaattcgcaaca 31735365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 46431668 - 46431548
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||  |||||||||||| |||||||| |||||||||||||| ||||||| || ||||| || ||||||||||||    
T  46431668 cgttgttttctacttttggcttgtattta--attgttccatacgctttgttttggttgcttgattatctcttgctccaaacatc-aagttgttattggtg 46431572  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | ||||||  |||||||||| |||||    
T  46431571 tgattttt--catcgaattcgcaaca 46431548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 13762154 - 13762275
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||||||||| ||||||||||||||  ||| || |||||||| || ||||||||||||    
T  13762154 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatccctttctccacacatc-aagttgttattggtg 13762250  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | ||||| | |||||||||| |||||    
T  13762251 tgattttct-catcgaattcgcaaca 13762275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 126
Target Start/End: Complemental strand, 25860392 - 25860276
Alignment:
Q  9 tctcttcttttctctctcg---ttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcaca 105  Q
    ||||||||||| |||||||   |||||||||||||||||||||||||||||||||||||||||||||||||    ||| |||| |||  |||||| ||||    
T  25860392 tctcttcttttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgtt----ttggttgactatcccttgctccaca 25860297  T
Q  106 catcaaatttgttattggtgt 126  Q
    |||||| |||| |||||||||    
T  25860296 catcaagtttgatattggtgt 25860276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 31 - 152
Target Start/End: Original strand, 15916706 - 15916822
Alignment:
Q  31 ttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 130  Q
    ||||||||||||||||||||||||||| |  |||||||||||||||| |||||||||||| || |||||| |||||||||| | | |||||||||| | |    
T  15916706 ttttctacttttggcttgtgtttataact--tccatacactttgttttggttgcttgattgttacttgctccacacatcaagtat-ttattggtgtgact 15916802  T
Q  131 ttttccatcgaattcacaacag 152  Q
    |||  |||||||||||||||||    
T  15916803 ttt--catcgaattcacaacag 15916822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 148
Target Start/End: Complemental strand, 18800548 - 18800426
Alignment:
Q  21 tctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttat 120  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||||||||||| | |||||||||||||  |||||  ||||||||| | | || |    
T  18800548 tctctcgttgttttctacttttggcttgtgtttataa--cttccatacactttgttttgattgcttgattattatttgctctacacatcaagtattttgt 18800451  T
Q  121 tggtgtaattttttccatcgaattcaca 148  Q
    |||||| |||||   |||||||||||||    
T  18800450 tggtgtgatttt---catcgaattcaca 18800426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 151
Target Start/End: Original strand, 51757862 - 51757973
Alignment:
Q  35 ctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatttttt 134  Q
    ||||||||||||||| || |  ||||||||||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||| ||||||     
T  51757862 ctacttttggcttgtattca--attgttccatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtcattttt- 51757957  T
Q  135 ccatcgaattcacaaca 151  Q
     ||||||||||||||||    
T  51757958 -catcgaattcacaaca 51757973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 27 - 126
Target Start/End: Original strand, 2617836 - 2617933
Alignment:
Q  27 gttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    ||||||||||||||||||||||| ||||  |||||||||||||||||| ||| ||||||||||||||  ||||||||||||||| || ||||||||||||    
T  2617836 gttgttttctacttttggcttgtattta--attgttccatacactttgattttggttgcttgattatcccttgcttcacacatc-aagttgttattggtg 2617932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 16226486 - 16226607
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggt 124  Q
    |||||||||||||||||||||||| |||||||   || ||||||||||| ||| ||||||||||||||  |||||| |||||||| || |||||||||||    
T  16226486 cgttgttttctacttttggcttgtatttataa--ctttcatacactttgattttggttgcttgattatcccttgctccacacatc-aagttgttattggt 16226582  T
Q  125 gtaattttttccatcgaattcacaaca 151  Q
    || ||||||  ||||||||||||||||    
T  16226583 gtgattttt--catcgaattcacaaca 16226607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 17324631 - 17324482
Alignment:
Q  1 ttgtgttctctcttcttttct---ctctcgttgttttctacttt-tggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttct 96  Q
    |||||||||||||||| ||||   |||||| ||||||||||||| |||||| || |||||||||||| || |||||||||  || ||||||| |||  ||    
T  17324631 ttgtgttctctcttctcttcttttctctcgctgttttctactttctggcttatgattataattgttctattcactttgttatggctgcttgactatccct 17324532  T
Q  97 tgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcac 147  Q
    | || |||||||||| |||||||||||||| | ||||| ||||||||||||    
T  17324531 tactccacacatcaagtttgttattggtgtgagttttt-catcgaattcac 17324482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 23786157 - 23786278
Alignment:
Q  26 cgttgttttctactttt-ggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggt 124  Q
    ||||||||||||||||| ||||||| ||||  |||||||||||| |||||||| |||||||| |||||  |||||| |||||||| || |||||||||||    
T  23786157 cgttgttttctactttttggcttgtattta--attgttccatacgctttgttttggttgcttaattatcccttgctccacacatc-aagttgttattggt 23786253  T
Q  125 gtaattttttccatcgaattcacaaca 151  Q
    || ||||||  ||||||||||||||||    
T  23786254 gtgattttt--catcgaattcacaaca 23786278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 26 - 132
Target Start/End: Complemental strand, 2510305 - 2510202
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||| ||||| ||||| ||||  |||||||||||||||||||||  ||||||||||||| |||||||||||| ||| || ||||||||||||    
T  2510305 cgttgttttctatttttgacttgttttta--attgttccatacactttgttttcgttgcttgattatctcttgcttcacatatc-aagttgttattggtg 2510209  T
Q  126 taatttt 132  Q
    | |||||    
T  2510208 tgatttt 2510202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 152
Target Start/End: Original strand, 16231881 - 16232003
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggt 124  Q
    |||||||||||||||||||||||| |||||||   || ||||||||||| ||| ||||||||||||||   ||||| |||||||| || |||||||||||    
T  16231881 cgttgttttctacttttggcttgtatttataa--ctttcatacactttgattttggttgcttgattatccgttgctccacacatc-aagttgttattggt 16231977  T
Q  125 gtaattttttccatcgaattcacaacag 152  Q
    || ||||||  |||||||||||||||||    
T  16231978 gtgattttt--catcgaattcacaacag 16232003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 16428940 - 16429043
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||||||||||||  | |||||||||||||||| ||||||||||||   ||| ||||||||||||| |||||| |||||||  ||||||    
T  16428940 ttgtgttctctcttcttttctctc--gatgttttctacttttggtttgtgtttataa--cttctatacactttgttttggttgcctgattatcacttgct 16429035  T
Q  101 tcacacat 108  Q
     |||||||    
T  16429036 ccacacat 16429043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 20291774 - 20291894
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggt 124  Q
    |||||||||||||||||||||||| ||  |||||||||||||||| ||| ||| |||| ||||||||| ||||||| |||||||| || |||||||||||    
T  20291774 cgttgttttctacttttggcttgtatt--taattgttccatacaccttgattttggttacttgattatctcttgctccacacatc-aagttgttattggt 20291870  T
Q  125 gtaattttttccatcgaattcacaaca 151  Q
    || |||||   |||||||||| |||||    
T  20291871 gtgatttt---catcgaattcgcaaca 20291894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 61 - 151
Target Start/End: Complemental strand, 30790337 - 30790250
Alignment:
Q  61 ttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||  | | |||||||||| |||||   ||||||||||||||||    
T  30790337 ttccatacactttgttttggttgcttgattattacttgcttcacacatcaggtattttattggtgtgatttt---catcgaattcacaaca 30790250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 133
Target Start/End: Original strand, 16432705 - 16432805
Alignment:
Q  31 ttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 130  Q
    |||||||||||||| || ||||||||| | |  |||||||| ||||| | |||| |||||||| |||||| ||||||||||||||||||||||||| |||    
T  16432705 ttttctacttttggtttatgtttataacttt--catacactgtgttttgattgcctgattattacttgctccacacatcaaatttgttattggtgtgatt 16432802  T
Q  131 ttt 133  Q
    |||    
T  16432803 ttt 16432805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 151
Target Start/End: Complemental strand, 8349021 - 8348905
Alignment:
Q  28 ttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgta 127  Q
    ||||||||||||||||  |||||||||||| |  |||||||||||||||| ||||||||||||||| |||| | ||||| |||| ||| ||||||||||     
T  8349021 ttgttttctacttttgt-ttgtgtttataact--tccatacactttgttt-ggttgcttgattattacttgttccacacgtcaagttt-ttattggtgtg 8348927  T
Q  128 attttttccatcgaattcacaaca 151  Q
    ||||||  ||||||||||||||||    
T  8348926 attttt--catcgaattcacaaca 8348905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 17186122 - 17185979
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||  |||||||| |  |||||||||||||||  ||||| |||||| |  |||||||||||||||| |||||||||| |||  ||||||    
T  17186122 ttgtgttctctctttctttctctcgc--tgttttctacttttgt-ttgtgattataact--tccatacactttgttttggttgcttgactatcacttgct 17186028  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
     |||| ||||| ||| |||||||||| ||||||  |||| |||||||||||    
T  17186027 ccacatatcaagtttattattggtgtgattttt--catcaaattcacaaca 17185979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 20302759 - 20302879
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggt 124  Q
    |||||||||||||||||||||||| ||  |||||||||||||||| ||| ||| |||| ||||||||| ||||||| || ||||| || |||||||||||    
T  20302759 cgttgttttctacttttggcttgtatt--taattgttccatacaccttgattttggttacttgattatctcttgctccagacatc-aagttgttattggt 20302855  T
Q  125 gtaattttttccatcgaattcacaaca 151  Q
    || |||||   |||||||||| |||||    
T  20302856 gtgatttt---catcgaattcgcaaca 20302879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 6115097 - 6114991
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||||||||||||  ||||| ||||||||||| ||||| |||||||   ||||||||| ||| ||| ||||||||||||||  ||| ||    
T  6115097 ttgtgttctctcttcttttctctc--gttgtcttctacttttgacttgtatttataa--cttccatacattttattttggttgcttgattatcactttct 6115002  T
Q  101 tcacacatcaa 111  Q
     ||||||||||    
T  6115001 ccacacatcaa 6114991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 28842812 - 28842931
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| |||||||   || |||||||||||||| ||||||||||||||  ||| || |||||||| || |||||||| |||    
T  28842812 cgttgttttctacttttggcttgtatttataa--ctttcatacactttgttttggttgcttgattatcccttactccacacatc-aagttgttattagtg 28842908  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | |||||   |||||||||| |||||    
T  28842909 tgatttt---catcgaattcgcaaca 28842931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 151
Target Start/End: Original strand, 43104493 - 43104615
Alignment:
Q  21 tctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtt-tcggttgcttgattatttcttgcttcacacatcaaatttgtta 119  Q
    ||||||| ||||||||||||||| ||||||||| ||||||||||   ||| ||| | ||||||||||||||||||  ||||||||| ||||||| | |||    
T  43104493 tctctcgctgttttctacttttg-cttgtgtttgtaattgttcc---cacgttgatatcggttgcttgattattt--tgcttcacatatcaaatatttta 43104586  T
Q  120 ttggtgtaattttttccatcgaattcacaaca 151  Q
    |||||||||||||   |||| |||||||||||    
T  43104587 ttggtgtaatttt---catcaaattcacaaca 43104615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 47177680 - 47177801
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggt 124  Q
    |||||||||||||||||||||||| ||  ||||| |||||||| ||||| ||| |||||||| |||||  |||||| |||||||| || |||||||||||    
T  47177680 cgttgttttctacttttggcttgtatt--taattattccatacgctttgattttggttgcttaattatcccttgctccacacatc-aagttgttattggt 47177776  T
Q  125 gtaattttttccatcgaattcacaaca 151  Q
    || ||||||   |||||||||||||||    
T  47177777 gtgattttt--gatcgaattcacaaca 47177801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 24325981 - 24326101
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    ||||||||| ||| |||| ||||| ||||  |||||||||||||||||  || ||||||||||||||  ||| || |||||||| || ||||||||||||    
T  24325981 cgttgttttttacctttgacttgtattta--attgttccatacactttactttggttgcttgattatcccttactccacacatc-aagttgttattggtg 24326077  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | ||||||  ||||||||||||||||    
T  24326078 tgattttt--catcgaattcacaaca 24326101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 111
Target Start/End: Original strand, 28840997 - 28841080
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaa 111  Q
    |||||||||||||||||||||||| |||||||   || |||||||||||||| ||||||||||||||  |||||| ||| ||||||    
T  28840997 cgttgttttctacttttggcttgtatttataa--ctttcatacactttgttttggttgcttgattatcccttgctccactcatcaa 28841080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 133
Target Start/End: Complemental strand, 13125451 - 13125326
Alignment:
Q  2 tgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgctt 101  Q
    ||||||||||||| | || |||||||||||||||||||||| |||||||||||||| |||  ||  ||| |||||| |||||||||||||||| |||||     
T  13125451 tgtgttctctcttttctt-tctctcgttgttttctactttt-gcttgtgtttataactgt--cacccac-ttgttttggttgcttgattattt-ttgctc 13125358  T
Q  102 cacacatcaaatttgttattggtgtaattttt 133  Q
    |||||||||| |   |||||||||| ||||||    
T  13125357 cacacatcaagtaatttattggtgtgattttt 13125326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 47180031 - 47180152
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggt 124  Q
    |||||||||||||||||||||||| ||  ||||| |||||||| ||||| ||| | |||||| |||||  |||||| |||||||| || |||||||||||    
T  47180031 cgttgttttctacttttggcttgtatt--taattattccatacgctttgattttgattgcttaattatcccttgctccacacatc-aagttgttattggt 47180127  T
Q  125 gtaattttttccatcgaattcacaaca 151  Q
    || ||||||   |||||||||||||||    
T  47180128 gtgattttt--gatcgaattcacaaca 47180152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 35 - 151
Target Start/End: Original strand, 51752696 - 51752805
Alignment:
Q  35 ctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatttttt 134  Q
    ||||||||||||||| || |  |||||| |||||||||||||| ||||||||||||||  |||||| |||||||  || || |||||||||| |||||      
T  51752696 ctacttttggcttgtattca--attgtttcatacactttgttttggttgcttgattatcccttgctccacacat--aagttattattggtgtgatttt-- 51752789  T
Q  135 ccatcgaattcacaaca 151  Q
     ||||||||||||||||    
T  51752790 -catcgaattcacaaca 51752805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 6756817 - 6756877
Alignment:
Q  4 tgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccat 66  Q
    ||||||||||||||| ||||| |  ||||||||||||||| ||||||||||||||||||||||    
T  6756817 tgttctctcttctttcctctcgc--tgttttctacttttgacttgtgtttataattgttccat 6756877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 25128159 - 25128280
Alignment:
Q  1 ttgtgttctctcttcttttct--ctctcgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttctt 97  Q
    ||||||||||||||| |||||  |||||| ||||||||||||||   ||||| ||||||||| |  || ||||||| ||| ||||||||||||||| |||    
T  25128159 ttgtgttctctcttcctttctttctctcgctgttttctacttttat-ttgtgattataattgct--atccactttgattttggttgcttgattattcctt 25128255  T
Q  98 gcttcacacatcaaatttgttattg 122  Q
    |||  ||||||||| ||||||||||    
T  25128256 gctctacacatcaagtttgttattg 25128280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 13358891 - 13359011
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggt 124  Q
    |||||||||||||||||||||||| |||||||   || ||||||||||| ||| |||||||||| |||  ||| || |||||||| || |||||||||||    
T  13358891 cgttgttttctacttttggcttgtatttataa--ctttcatacactttgattttggttgcttgactatcccttactccacacatc-aagttgttattggt 13358987  T
Q  125 gtaattttttccatcgaattcacaaca 151  Q
    || |||||   |||||||||| |||||    
T  13358988 gtgatttt---catcgaattcgcaaca 13359011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 15669387 - 15669279
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||  ||| ||||||| ||| || ||||||||  |||||||||||| |  || ||||||||||||| | |||||||||||||  |||||    
T  15669387 ttgtgttctctctttcttt-tctctcgctgtgttatacttttgt-ttgtgtttataact--tcgatacactttgttttgattgcttgattattatttgct 15669292  T
Q  101 tcacacatcaaat 113  Q
    |||||||||||||    
T  15669291 tcacacatcaaat 15669279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 27916789 - 27916836
Alignment:
Q  9 tctcttcttttctctctcgttgttttctacttttggcttgtgtttataa 57  Q
    |||||| |||||||||||||||||||||||||||  |||||||||||||    
T  27916789 tctctttttttctctctcgttgttttctactttt-acttgtgtttataa 27916836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 107
Target Start/End: Complemental strand, 26519373 - 26519328
Alignment:
Q  61 ttccatacactttgtttcggttgcttgattatttcttgcttcacaca 107  Q
    ||||||||||||||||| ||||||||||||||| |||||| ||||||    
T  26519373 ttccatacactttgttt-ggttgcttgattattacttgctccacaca 26519328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 26520114 - 26520061
Alignment:
Q  2 tgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttata 56  Q
    |||||||||||||  ||| ||||||| |||||||||||||| |||||||||||||    
T  26520114 tgtgttctctctttcttt-tctctcgctgttttctacttttagcttgtgtttata 26520061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 50078815 - 50078779
Alignment:
Q  1 ttgtgttctctcttctttt-ctctctcgttgttttct 36  Q
    ||||||||||||||||||| |||||||||||||||||    
T  50078815 ttgtgttctctcttctttttctctctcgttgttttct 50078779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 97; Significance: 1e-47; HSPs: 2)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 14377 - 14231
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||    
T  14377 ttgtgttctctcttcctttctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatcccttgct 14278  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
     |||||||| || ||||||||||||| |||||   ||||||||||||||||    
T  14277 ccacacatc-aagttgttattggtgtgatttt---catcgaattcacaaca 14231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 15386 - 15436
Alignment:
Q  96 ttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcaca 148  Q
    |||||| ||||||||| |||||||||||||| ||||||  |||||||||||||    
T  15386 ttgcttgacacatcaagtttgttattggtgtgattttt--catcgaattcaca 15436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 93; Significance: 2e-45; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 24338441 - 24338295
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||| ||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||| |||||||    
T  24338441 ttgtgttatctcttcttttctctc--gttgttttctacttttggtttgtgtttataattgttccatacactttgttttggttgcttgactatctcttgct 24338344  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
     |||||||||| |||||||||| ||| ||||||  ||||||||||||||||    
T  24338343 ccacacatcaagtttgttattgatgtgattttt--catcgaattcacaaca 24338295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 11983022 - 11982872
Alignment:
Q  1 ttgtgttctctcttcttttctctctcg---ttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttctt 97  Q
    ||||||||||||||||||| |||||||   ||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||| |||    
T  11983022 ttgtgttctctcttcttttttctctcgctgttgttttctacttttggcttgtgattgtaattgttccatacactttgttttggttgcttgattattcctt 11982923  T
Q  98 gcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    ||| |||||||| || ||||||||||||| ||||||  ||||||||||||||||    
T  11982922 gctccacacatc-aagttgttattggtgtgattttt--catcgaattcacaaca 11982872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 4 - 154
Target Start/End: Complemental strand, 1069708 - 1069560
Alignment:
Q  4 tgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttca 103  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||| |||  |||||| ||    
T  1069708 tgttctctcttcttttctctctcgctgttttctactttttgcttgtgtttataattgttccatacactttgttttgattgcttgactatcccttgctcca 1069609  T
Q  104 cacatcaaatttgttattggtgtaattttttccatcgaattcacaacagga 154  Q
     ||||| |||||||||||||| ||  ||||  |||||||||||||||||||    
T  1069608 tacatcgaatttgttattggtata--ttttctcatcgaattcacaacagga 1069560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 3629858 - 3629711
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctactttt-ggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgc 99  Q
    ||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||   ||||    
T  3629858 ttgtgttctctcttcttttctctc--gttgttttctactttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatcctttgc 3629761  T
Q  100 ttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    | |||||||||| ||||||||||||||   ||||  ||||||||||||||||    
T  3629760 tccacacatcaagtttgttattggtgt--gttttctcatcgaattcacaaca 3629711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 3631932 - 3631784
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||| ||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||  ||||||    
T  3631932 ttgtgttatctcttcctttttctctcgatgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcctaattatcacttgct 3631833  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
     ||||| |||| ||||||||||||||   ||||| ||||||||||||||||    
T  3631832 ccacacgtcaagtttgttattggtgt--gttttttcatcgaattcacaaca 3631784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 9020247 - 9020398
Alignment:
Q  1 ttgtgttctctcttc--ttttctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttctt 97  Q
    |||||||||||||||  ||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||  ||||||| ||||    
T  9020247 ttgtgttctctcttcccttttctctcgctgttgttttctacttttggcttgtatttataattgttccatacactttgttttggttgtctgattatctctt 9020346  T
Q  98 gcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    ||| |||||||||| |||||||||||||| ||||||  |||||||||| |||||    
T  9020347 gctccacacatcaagtttgttattggtgtgattttt--catcgaattcgcaaca 9020398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 21 - 151
Target Start/End: Original strand, 15367370 - 15367498
Alignment:
Q  21 tctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttat 120  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  | |||| |||||||||| ||||||||    
T  15367370 tctctcgtatttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatcacatgctccacacatcaagtttgttat 15367469  T
Q  121 tggtgtaattttttccatcgaattcacaaca 151  Q
    |||||| ||||||  ||||||||||||||||    
T  15367470 tggtgtgattttt--catcgaattcacaaca 15367498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 30728817 - 30728685
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||| ||||||| ||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||| |||| |||  ||||||    
T  30728817 ttgtgttatctcttcctttctctctcgctgttttctacttttgacttgtatttataattgttccatacactttgttttggttgtttgactatcccttgct 30728718  T
Q  101 tcacacatcaaatttgttattggtgtaattttt 133  Q
     |||||||||| |||||||||||||| ||||||    
T  30728717 ccacacatcaagtttgttattggtgtgattttt 30728685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 21 - 151
Target Start/End: Original strand, 15346685 - 15346813
Alignment:
Q  21 tctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttat 120  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||  |||| | |||||||||| ||||||||    
T  15346685 tctcttgttgttttctacttttggcttgtgtttataattgttccatatactttgttttggttgcttgattatcacttgttccacacatcaagtttgttat 15346784  T
Q  121 tggtgtaattttttccatcgaattcacaaca 151  Q
    |||||| ||||||  ||||||||| ||||||    
T  15346785 tggtgtgattttt--catcgaatttacaaca 15346813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 3394695 - 3394814
Alignment:
Q  8 ctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacac 106  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||   || || |||||    
T  3394695 ctctcttcctttctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgtttttggttgcttgattatccatttctccacac 3394794  T
Q  107 atcaaatttgttattggtgt 126  Q
    |||||  || ||||||||||    
T  3394795 atcaagatttttattggtgt 3394814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 15530156 - 15530003
Alignment:
Q  1 ttgtgttctctcttctttt-ctctctcgttgttttctacttttggcttgtgtttataattgttccatacactt-tgtttcggttgcttgattatttcttg 98  Q
    ||||||||||||||||||| ||||   ||||||||||||||||||||||| ||||||||||||||||||||||   ||| | |||  |||||||| |||     
T  15530156 ttgtgttctctcttctttttctctgctgttgttttctacttttggcttgtatttataattgttccatacacttaaattttgattgtctgattattcctta 15530057  T
Q  99 cttcacacatcaaatttgttattggtgtaattttttc-catcgaattcacaaca 151  Q
    || |||||||||| |||||||||||||| | |||||| ||||||||||||||||    
T  15530056 ctccacacatcaagtttgttattggtgtgagtttttctcatcgaattcacaaca 15530003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 28241282 - 28241163
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||||||||| | |||||||||||| ||||||| |||||||| || ||||||||||||    
T  28241282 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttgattgcttgattatctcttgctccacacatc-aagttgttattggtg 28241186  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | |||||   ||||||||||||||||    
T  28241185 tgatttt---catcgaattcacaaca 28241163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 3233718 - 3233594
Alignment:
Q  1 ttgtgttctctcttc-ttttctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttctt 97  Q
    ||||||||||||||| ||||||||| | |||||||||||||||||| ||||||||||||||||| ||| ||||||| ||| |||||| |||||||  |||    
T  3233718 ttgtgttctctcttccttttctctcgctgttgttttctacttttggtttgtgtttataattgtttcatgcactttgattttggttgcctgattatcactt 3233619  T
Q  98 gcttcacacatcaaatttgttattg 122  Q
     || |||||||||||||||||||||    
T  3233618 actccacacatcaaatttgttattg 3233594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 126
Target Start/End: Complemental strand, 14507137 - 14507040
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||    
T  14507137 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtg 14507041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 26065333 - 26065457
Alignment:
Q  27 gttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    ||||||||||||||||||| |||| |||||| |||||||||| ||||| ||| |||||||||| |||  |||||| |||||||| || ||||||||||||    
T  26065333 gttgttttctacttttggcatgtgattataactgttccatacgctttgattttggttgcttgactatcccttgctccacacatc-aagttgttattggtg 26065431  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | ||||||  ||||||||||||||||    
T  26065432 tgatttttctcatcgaattcacaaca 26065457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 26085302 - 26085426
Alignment:
Q  27 gttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    ||||||||||||||||||| |||| |||||| |||||||||| ||||| ||| |||||||||| |||  |||||| |||||||| || ||||||||||||    
T  26085302 gttgttttctacttttggcatgtgattataactgttccatacgctttgattttggttgcttgactatcccttgctccacacatc-aagttgttattggtg 26085400  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | ||||||  ||||||||||||||||    
T  26085401 tgatttttctcatcgaattcacaaca 26085426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 32280318 - 32280463
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||| ||||||||  ||| ||||||||||||||||||| |||||||||||| |  ||   |||| | ||||||||||||||  ||| ||    
T  32280318 ttgtgttctctcttcctttctctcatgttattttctacttttggcttgtatttataattgttacccac---ttgtattggttgcttgattatcacttact 32280414  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
     || ||||||| ||||||||| |||| |||||||  |||||||||||||||    
T  32280415 ccatacatcaagtttgttatttgtgtgatttttt--atcgaattcacaaca 32280463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 152
Target Start/End: Complemental strand, 29754669 - 29754548
Alignment:
Q  27 gttgttttctactttt-ggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||| |||| || ||||  |||||||||||| |||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||    
T  29754669 gttgttttctactttttggctcgtattta--attgttccatacgctttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtg 29754573  T
Q  126 taattttttccatcgaattcacaacag 152  Q
    | ||||||  |||||||||||||||||    
T  29754572 tgattttt--catcgaattcacaacag 29754548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 31 - 133
Target Start/End: Complemental strand, 4816186 - 4816087
Alignment:
Q  31 ttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 130  Q
    ||||||||||||| ||||| ||||  ||||||||||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||| |||    
T  4816186 ttttctacttttgacttgtattta--attgttccatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgatt 4816090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 5273177 - 5273055
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggt 124  Q
    |||||||||||||||||||||||| |||| ||   || ||||||||||| ||| ||||||||||||||  |||||| |||||||| || |||||||||||    
T  5273177 cgttgttttctacttttggcttgtatttaaaa--attacatacactttgattttggttgcttgattatcccttgctccacacatc-aagttgttattggt 5273081  T
Q  125 gtaattttttccatcgaattcacaaca 151  Q
    || ||||||| ||||||||||||||||    
T  5273080 gtgatttttt-catcgaattcacaaca 5273055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 31 - 154
Target Start/End: Complemental strand, 19704521 - 19704400
Alignment:
Q  31 ttttctacttttggcttgtgtttataattgttccatacactttg--tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaa 128  Q
    ||||||||||||||||||| ||||  ||||||||||||||||||  ||| ||||||||||||||  |||||| |||||||| || ||||||||||||| |    
T  19704521 ttttctacttttggcttgtattta--attgttccatacactttgatttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtga 19704425  T
Q  129 ttttttccatcgaattcacaacagga 154  Q
     ||| || ||||||||||||||||||    
T  19704424 -tttctcgatcgaattcacaacagga 19704400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 21 - 151
Target Start/End: Original strand, 25480219 - 25480346
Alignment:
Q  21 tctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttat 120  Q
    ||||||| ||||||||||||||| |||||| ||||||||||| |||||||||| ||| ||||||| || |||  ||| ||  ||||||||||| | ||||    
T  25480219 tctctcgctgttttctacttttgacttgtgattataattgtttcatacactttattttggttgctcgactatcccttactctacacatcaaatat-ttat 25480317  T
Q  121 tggtgtaattttttccatcgaattcacaaca 151  Q
    |||||| ||||||  ||||||||||||||||    
T  25480318 tggtgtgattttt--catcgaattcacaaca 25480346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 26066081 - 26065961
Alignment:
Q  27 gttgttttctactttt-ggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||| ||||||| ||||  |||||||||||| |||||||| |||||||| |||||  |||||| |||||||| || ||||||||||||    
T  26066081 gttgttttctactttttggcttgtattta--attgttccatacgctttgttttggttgcttaattatcccttgctccacacatc-aagttgttattggtg 26065985  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | ||||||  ||||||||||||||||    
T  26065984 tgattttt--catcgaattcacaaca 26065961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 26068355 - 26068235
Alignment:
Q  27 gttgttttctactttt-ggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||| ||||||| ||||  |||||||||||| |||||||| |||||||| |||||  |||||| |||||||| || ||||||||||||    
T  26068355 gttgttttctactttttggcttgtattta--attgttccatacgctttgttttggttgcttaattatcccttgctccacacatc-aagttgttattggtg 26068259  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | ||||||  ||||||||||||||||    
T  26068258 tgattttt--catcgaattcacaaca 26068235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 26 - 152
Target Start/End: Original strand, 33311478 - 33311599
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggt 124  Q
    |||||||||||||||||||||||| ||  |||||||||||||| ||||| ||| |||||||| |||||  |||||| |||||||| || |||||||||||    
T  33311478 cgttgttttctacttttggcttgtatt--taattgttccatacgctttgattttggttgcttaattatcccttgctccacacatc-aagttgttattggt 33311574  T
Q  125 gtaattttttccatcgaattcacaacag 152  Q
    || |||||   |||||||||||||||||    
T  33311575 gtgatttt---catcgaattcacaacag 33311599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 2628847 - 2628727
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggt 124  Q
    |||||||||||||||||||||||| |||||||   |||||||||||||| ||| ||||||||||||||  |||||| |||||||| || |||||||||||    
T  2628847 cgttgttttctacttttggcttgtatttataa--cttccatacactttgattttggttgcttgattatcccttgctccacacatc-aagttgttattggt 2628751  T
Q  125 gtaattttttccatcgaattcacaaca 151  Q
    || |||||   |||||||||| |||||    
T  2628750 gtgatttt---catcgaattcgcaaca 2628727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 33309209 - 33309329
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggt 124  Q
    |||||||||||||||||||||||| ||  |||||||||||||| ||||| ||| |||||||| |||||  |||||| |||||||| || |||||||||||    
T  33309209 cgttgttttctacttttggcttgtatt--taattgttccatacgctttgattttggttgcttaattatcccttgctccacacatc-aagttgttattggt 33309305  T
Q  125 gtaattttttccatcgaattcacaaca 151  Q
    || |||||   ||||||||||||||||    
T  33309306 gtgatttt---catcgaattcacaaca 33309329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 151
Target Start/End: Complemental strand, 3027827 - 3027703
Alignment:
Q  21 tctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttat 120  Q
    ||||||||||||||||||||||| ||||| |||||||   ||||||||||||| ||| ||||||| ||||||| |||||| |||||||||||| | ||||    
T  3027827 tctctcgttgttttctacttttgacttgtatttataa--cttccatacactttattt-ggttgctcgattattacttgctccacacatcaaatat-ttat 3027732  T
Q  121 tggtgtaattttttccatcgaattcacaaca 151  Q
     ||||| ||||||  ||| ||||||||||||    
T  3027731 cggtgtgattttt--cattgaattcacaaca 3027703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 133
Target Start/End: Complemental strand, 1230210 - 1230105
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    ||||||||| |||||||||||| ||| | |||||||| |||||||||| ||| |||||||||||||| ||||| | |||||||| || ||||||||||||    
T  1230210 cgttgttttatacttttggctt-tgtatttaattgtttcatacactttattttggttgcttgattatctcttgatccacacatc-aagttgttattggtg 1230113  T
Q  126 taattttt 133  Q
    | ||||||    
T  1230112 tgattttt 1230105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 149
Target Start/End: Original strand, 22490954 - 22491077
Alignment:
Q  21 tctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttat 120  Q
    ||||||||||||||||||||||||| | |||||||||||||| |  ||   |||||| ||||||||||||||   | ||| ||||||| || ||||||||    
T  22490954 tctctcgttgttttctacttttggcctatgtttataattgttacccac---ttgttttggttgcttgattatccttagctccacacattaagtttgttat 22491050  T
Q  121 tggtgtaattttttccatcgaattcacaa 149  Q
    |||||| ||||||  ||||||||||||||    
T  22491051 tggtgtgattttt--catcgaattcacaa 22491077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 132
Target Start/End: Original strand, 30967554 - 30967657
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||| ||||| ||  ||||| |||||| |||||||||| |||| ||||||||| ||||||| |||||||| || ||||||||||||    
T  30967554 cgttgttttctacttttgacttgtatt--taattattccatgcactttgttttggttacttgattatctcttgctccacacatc-aagttgttattggtg 30967650  T
Q  126 taatttt 132  Q
    | |||||    
T  30967651 tgatttt 30967657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 31 - 151
Target Start/End: Complemental strand, 26932518 - 26932403
Alignment:
Q  31 ttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 130  Q
    |||||||| |||||||||| ||||||| | |  |||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||| |||    
T  26932518 ttttctacctttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgatt 26932422  T
Q  131 ttttccatcgaattcacaaca 151  Q
    |||  |||| |||||||||||    
T  26932421 ttt--catcaaattcacaaca 26932403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 14466645 - 14466787
Alignment:
Q  1 ttgtgttctctcttcttttctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgc 99  Q
    ||||||||||||||  |||||||| | | |||||||||||||||  ||||| |||||| | |  |||||| ||||||| |||||||||| |||  |||||    
T  14466645 ttgtgttctctctttctttctctcgctgctgttttctacttttgt-ttgtgattataacttt--catacattttgttttggttgcttgactatcacttgc 14466741  T
Q  100 ttcacacatcaaatttgttattggtgtaattttttccatcgaattcac 147  Q
    | |||||||||||||| |||||||||| ||||||  ||||||||||||    
T  14466742 tgcacacatcaaatttattattggtgtgattttt--catcgaattcac 14466787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 31 - 151
Target Start/End: Original strand, 17012387 - 17012502
Alignment:
Q  31 ttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 130  Q
    ||||||||||||||||||||||| |||  |||| ||||||||||||| |||||||||||||||  ||||| |||||||||| | | |||||| ||| |||    
T  17012387 ttttctacttttggcttgtgttt-taac-gttc-atacactttgttttggttgcttgattattatttgctccacacatcaagtattttattgttgtgatt 17012483  T
Q  131 ttttccatcgaattcacaaca 151  Q
    |||  ||||||||||||||||    
T  17012484 ttt--catcgaattcacaaca 17012502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 12195475 - 12195354
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggt 124  Q
    |||||||||||||||||||||||| |||||||   || ||||| ||||| ||| |||||||| |||||  |||||| |||||||| || |||||||||||    
T  12195475 cgttgttttctacttttggcttgtatttataa--ctttcatacgctttgattttggttgcttaattatcccttgctccacacatc-aagttgttattggt 12195379  T
Q  125 gtaattttttccatcgaattcacaaca 151  Q
    || ||||||  ||||||||||||||||    
T  12195378 gtgattttt--catcgaattcacaaca 12195354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 12161551 - 12161498
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgttta 54  Q
    ||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||    
T  12161551 ttgtgttctctcttcctttctctctcgctgttttctacttttgtcttgtgttta 12161498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 21 - 133
Target Start/End: Original strand, 26945485 - 26945594
Alignment:
Q  21 tctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttat 120  Q
    ||||||| |||||||||||||||||||||||||||||   |||| |||||||||||| | ||  ||||||||| |||| |||||| ||||| | | ||||    
T  26945485 tctctcgctgttttctacttttggcttgtgtttataa--cttccttacactttgttt-gattctttgattattacttgtttcacatatcaagtgttttat 26945581  T
Q  121 tggtgtaattttt 133  Q
    |||||| ||||||    
T  26945582 tggtgtgattttt 26945594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 13057516 - 13057659
Alignment:
Q  1 ttgtgttctctctt-cttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgc 99  Q
    |||||||||||||| ||||||||| ||  |||||||||||||||  ||||| ||||||||||| |   ||||||  || ||||||||||||||   ||||    
T  13057516 ttgtgttctctctttcttttctctatc--tgttttctacttttgt-ttgtgattataattgttgcc--cacttttatt-ggttgcttgattatcctttgc 13057609  T
Q  100 ttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    | |||||||||| |||||||||||||| ||||||  |||||||||| |||||    
T  13057610 tccacacatcaagtttgttattggtgtgattttt--catcgaattcgcaaca 13057659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 15541133 - 15541006
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    |||||||||||||| |||||||||||||||||||||| |||| | ||||| |||||| |||| |   ||  |||||| |||| ||||| |||  ||||||    
T  15541133 ttgtgttctctctt-ttttctctctcgttgttttctaatttt-gtttgtgattataactgttac---caacttgttttggtttcttgactatcccttgct 15541039  T
Q  101 tcacacatcaaatttgttattggtgtaattttt 133  Q
     |||||||||| |||||||||||| | ||||||    
T  15541038 ccacacatcaagtttgttattggtttgattttt 15541006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 92
Target Start/End: Complemental strand, 14458729 - 14458663
Alignment:
Q  25 tcgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattat 92  Q
    ||||||||||||||||||||||||| ||  |||||||||||||||||||| ||| |||||| |||||||    
T  14458729 tcgttgttttctacttttggcttgtatt--taattgttccatacactttgattttggttgcctgattat 14458663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 133
Target Start/End: Original strand, 18322482 - 18322550
Alignment:
Q  64 catacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttt 133  Q
    |||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||| ||||||    
T  18322482 catacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgattttt 18322550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 132
Target Start/End: Original strand, 22611018 - 22611122
Alignment:
Q  23 tctcgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttatt 121  Q
    |||| |||||||||||||||| ||||||||||||||||||||   ||||||| | | |||||||||||||||  ||||| |||||||||| | | |||||    
T  22611018 tctcattgttttctacttttg-cttgtgtttataattgttcc---cactttgatattggttgcttgattatt--ttgctccacacatcaagtattttatt 22611111  T
Q  122 ggtgtaatttt 132  Q
    ||||| |||||    
T  22611112 ggtgtgatttt 22611122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 6610478 - 6610378
Alignment:
Q  27 gttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 126  Q
    |||||||| |||||||| ||| ||||||||||||||  || |||||||||| |||||||||||||||  ||||| ||||||| || | | ||||||||||    
T  6610478 gttgttttatacttttg-cttatgtttataattgtt--atccactttgttttggttgcttgattatt--ttgctccacacattaagtattttattggtgt 6610384  T
Q  127 aatttt 132  Q
     |||||    
T  6610383 gatttt 6610378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 12186064 - 12186000
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccata 67  Q
    ||||||||||||||  |||||||| |  ||||||||||||||  |||||||||||||||||||||||    
T  12186064 ttgtgttctctctttctttctctcgc--tgttttctactttttccttgtgtttataattgttccata 12186000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 12937168 - 12937126
Alignment:
Q  21 tctctcgttgttttctacttttggcttgtgtttataattgttcc 64  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  12937168 tctctcgttgttttctactttt-gcttgtgtttataattgttcc 12937126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 133
Target Start/End: Complemental strand, 20915312 - 20915213
Alignment:
Q  31 ttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 130  Q
    ||||||||||||||||||| ||||  ||| || |||||||||||||| |||||||||||||   |||||  |||||||| || || |||||||||| |||    
T  20915312 ttttctacttttggcttgtattta--attatttcatacactttgttttggttgcttgattaccccttgccccacacatc-aagttattattggtgtgatt 20915216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 151
Target Start/End: Complemental strand, 30034562 - 30034447
Alignment:
Q  28 ttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgta 127  Q
    ||||||||||||||| |||||| |||||||   || |||||||||||||| ||||||||||||| | |||||| || ||||| || |||||||||||||     
T  30034562 ttgttttctacttttagcttgtatttataa--ctttcatacactttgttt-ggttgcttgatta-tccttgctccatacatc-aagttgttattggtgtg 30034468  T
Q  128 attttttccatcgaattcacaaca 151  Q
    |||||   |||||||||| |||||    
T  30034467 atttt---catcgaattcgcaaca 30034447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 151
Target Start/End: Complemental strand, 8717264 - 8717195
Alignment:
Q  79 ggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    ||||||||||||||  |||||| |||||||| || ||||||||||||| ||||||  ||||||||||||||||    
T  8717264 ggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgattttt--catcgaattcacaaca 8717195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 132
Target Start/End: Original strand, 19696763 - 19696887
Alignment:
Q  2 tgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgctt 101  Q
    |||||||||||||  |||||||| |  | |||||||||||||  |||||||||||| |||  ||  |||||||||||||||||||||||| |  |||||     
T  19696763 tgtgttctctctttctttctctcgctgt-ttttctacttttgt-ttgtgtttataactgt--cacccactttgtttcggttgcttgattact--ttgctc 19696856  T
Q  102 cacacatcaaatttgttattggtgtaatttt 132  Q
    |||||||||| | | |||||||||| |||||    
T  19696857 cacacatcaagtattttattggtgtgatttt 19696887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 10584358 - 10584413
Alignment:
Q  95 cttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    |||||| |||||||||| ||||||||||||||  |||| | ||||||||||||||||    
T  10584358 cttgctccacacatcaagtttgttattggtgtggttttct-catcgaattcacaaca 10584413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 26505379 - 26505339
Alignment:
Q  2 tgtgttctctcttcttttctctctcgttgttttctactttt 42  Q
    |||||||||||||  ||| ||||||||||||||||||||||    
T  26505379 tgtgttctctctttctttttctctcgttgttttctactttt 26505339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 1e-44; HSPs: 70)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 31435039 - 31434892
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||| ||| | ||||||||||||| ||||||    
T  31435039 ttgtgttctctcttcttttctctc--gttgttttctacttttggcttgtgtttataattgttccttacactttattttgattgcttgattattccttgct 31434942  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
     |||||||||| |||||||||||||| ||||| | |||||||||| |||||    
T  31434941 ccacacatcaagtttgttattggtgtgattttct-catcgaattcgcaaca 31434892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 4 - 152
Target Start/End: Original strand, 21680329 - 21680473
Alignment:
Q  4 tgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttca 103  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||| |||||||||    
T  21680329 tgttctctcttcttttctc--tcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttttgttgcatgattattccttgcttca 21680426  T
Q  104 cacatcaaatttgttattggtgtaattttttccatcgaattcacaacag 152  Q
    ||||||||  |||||||||||||   ||||  |||||||||||||||||    
T  21680427 cacatcaagcttgttattggtgtgggtttt--catcgaattcacaacag 21680473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 443892 - 444044
Alignment:
Q  1 ttgtgttctctcttcttttctctctc--gttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttg 98  Q
    ||||||||||||||| ||||||||||  | |||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||| |||| ||||    
T  443892 ttgtgttctctcttcctttctctctctcgctgttttctacttttggcttgtgattataattgttcaatacactttgttttggttgcttgactattccttg 443991  T
Q  99 cttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    || |||||||||| |||||||||||||| | ||||  ||||||||||||||||    
T  443992 ctccacacatcaagtttgttattggtgtgagttttctcatcgaattcacaaca 444044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 4 - 151
Target Start/End: Original strand, 11355557 - 11355705
Alignment:
Q  4 tgttctctctt-cttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgctt 101  Q
    ||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||| ||||||     
T  11355557 tgttctctcttacttctctctcttgttgttttctacttttggcttgtgtttataattgttccatacactttgtttttggttgcctgattattccttgctc 11355656  T
Q  102 cacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    |||||||||||||| |||||||||| ||||||| |||||||||| |||||    
T  11355657 cacacatcaaatttattattggtgtgatttttt-catcgaattcccaaca 11355705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 21678360 - 21678506
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    |||||||||||||||||||||| | |  |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||    
T  21678360 ttgtgttctctcttcttttctcccgc--tgttttctacttttggcttgtgtttataattgttccttacactttgttttggttgcttgattattccttgct 21678457  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
     |||| ||||| |||||||| ||||| ||||||  ||||||||||||||||    
T  21678458 ccacaaatcaagtttgttatcggtgtgattttt--catcgaattcacaaca 21678506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 13099467 - 13099317
Alignment:
Q  1 ttgtgttctctcttc-ttttctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttg 98  Q
    ||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||  ||  ||||    
T  13099467 ttgtgttctctcttccttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgtttgacgatcccttg 13099368  T
Q  99 cttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    || |||||||||| |||||||||||||| ||||||  ||||||||||||||||    
T  13099367 ctccacacatcaagtttgttattggtgtgattttt--catcgaattcacaaca 13099317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 26804806 - 26804937
Alignment:
Q  1 ttgtgttctctcttcttttctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgc 99  Q
    ||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||   ||||    
T  26804806 ttgtgttctctcttcttttctctcgatgttgttttctacttttgacttgtgtttataattgttccatacactttgttttggttgcttgactatcctttgc 26804905  T
Q  100 ttcacacatcaaatttgttattggtgtaattt 131  Q
    | ||||||||||||||||||||||||| ||||    
T  26804906 tccacacatcaaatttgttattggtgtgattt 26804937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 9 - 151
Target Start/End: Complemental strand, 37412105 - 37411965
Alignment:
Q  9 tctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacat 108  Q
    ||||||||||||||||  ||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||| | |||||||    
T  37412105 tctcttcttttctctc--gttgttttctagttttggcttgtgattataattgttccatacactttgttttggttgcttgattattccttgttccacacat 37412008  T
Q  109 caaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    ||| |||||||||||||| | ||||  |||| |||||||||||    
T  37412007 caagtttgttattggtgtgagttttctcatcaaattcacaaca 37411965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 44724875 - 44725022
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataat-tgttccatacactttgtttcggttgcttgattatttcttgc 99  Q
    ||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||  |||||    
T  44724875 ttgtgttctctcttcatttctctc--gttgttttctacttttggcttgtgtttataatatgttccatacactttgttttggttgcttgactatcccttgc 44724972  T
Q  100 ttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    | |||||||||| ||||||||||||||   |||| ||||||||||| |||||    
T  44724973 tccacacatcaagtttgttattggtgt--gttttcccatcgaattcgcaaca 44725022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 21592136 - 21592018
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||  |||||||  ||||||    
T  21592136 ttgtgttctctcttcttttctctctcgctgttttctacttttggcttgtgtttataattgttccatacacttt-ttttggttgtctgattatcacttgct 21592038  T
Q  101 tcacacatcaaatttgttat 120  Q
     |||||||||| ||||||||    
T  21592037 ccacacatcaagtttgttat 21592018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 39145979 - 39145856
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||  ||||| ||||||| ||||||||||||||  ||| ||    
T  39145979 ttgtgttctctcttcctttctctctcgttgttttctacttttggtttgtgtttataattgtttaatacaatttgttttggttgcttgattatcacttact 39145880  T
Q  101 tcacacatcaaatttgttattggt 124  Q
     |||||||||| ||||||||||||    
T  39145879 ccacacatcaagtttgttattggt 39145856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 9679355 - 9679481
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgc 99  Q
    ||||||| ||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||| |||||||  |||||    
T  9679355 ttgtgttatctcttcctttctctctcgctgttttctacttttgacttgtgtttataattgttccatacactttgattttggttgcctgattatcacttgc 9679454  T
Q  100 ttcacacatcaaatttgttattggtgt 126  Q
    | |||||||||| ||||||||||||||    
T  9679455 tccacacatcaagtttgttattggtgt 9679481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 27306225 - 27306099
Alignment:
Q  1 ttgtgttctctcttcttttctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgc 99  Q
    |||||||||||||||||||||||| | |||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||| |||  ||||     
T  27306225 ttgtgttctctcttcttttctctcgctgttgttttcttcttttggcttgtgattataattgttccatacactttgttttggttgcttgactatcccttgt 27306126  T
Q  100 ttcacacatcaaatttgttattggtgt 126  Q
    | |||||||||| ||||||||||||||    
T  27306125 tccacacatcaagtttgttattggtgt 27306099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 4295927 - 4295797
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    |||||||||||||||||||||||| |  |  |||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||| ||| ||||||    
T  4295927 ttgtgttctctcttcttttctctcgccat--tttctacttttggcttgtgtttattattgttctatacactttgttttggttgcttgatgattccttgct 4295830  T
Q  101 tcacacatcaaatttgttattggtgtaattttt 133  Q
     |||||||||| |||||||||||||| ||||||    
T  4295829 ccacacatcaagtttgttattggtgtgattttt 4295797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 22251578 - 22251453
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||| ||||| ||||||||| | |||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||  ||||||    
T  22251578 ttgtgttctatcttcctttctctcttgctgttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgtttgattatcccttgct 22251479  T
Q  101 tcacacatcaaatttgttattggtgt 126  Q
      ||||||||| ||||||||||||||    
T  22251478 caacacatcaagtttgttattggtgt 22251453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 21990446 - 21990570
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgc 99  Q
    ||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||  |||||    
T  21990446 ttgtgttctctcttcctttctctctcgctgtttgctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgc 21990545  T
Q  100 ttcacacatcaaatttgttattggt 124  Q
    | |||||||||| ||| ||||||||    
T  21990546 tccacacatcaagtttattattggt 21990570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 17 - 152
Target Start/End: Complemental strand, 42330978 - 42330845
Alignment:
Q  17 tttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttg 116  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||   ||||| |||||||||| |||     
T  42330978 tttctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatccattgctccacacatcaagttta 42330879  T
Q  117 ttattggtgtaattttttccatcgaattcacaacag 152  Q
    ||||||| || |||| |  |||||||||| ||||||    
T  42330878 ttattggcgtgatttct--catcgaattcgcaacag 42330845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 20297690 - 20297810
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||||||||| |||||||||||||| ||||||| |||||||| || ||||||||||||    
T  20297690 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatctcttgctccacacatc-aagttgttattggtg 20297786  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | ||||||  ||||||||||||||||    
T  20297787 tgattttt--catcgaattcacaaca 20297810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 9681116 - 9681242
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgc 99  Q
    ||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||| |||||  | |||||  ||||     
T  9681116 ttgtgttctctcttcctttctctctcgatcttttctacttttggcttgtgtttataattgttccatacactttgattttggttgtctaattatcacttgt 9681215  T
Q  100 ttcacacatcaaatttgttattggtgt 126  Q
    | |||||||||| ||||||||||||||    
T  9681216 tccacacatcaagtttgttattggtgt 9681242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 42223454 - 42223600
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    |||| |||||||||||||||||||   |||||||||||||||| ||||||||||||||||||  ||||||||| ||| ||||||||||||||  ||| ||    
T  42223454 ttgttttctctcttcttttctctca--ttgttttctacttttgccttgtgtttataattgttttatacactttattttggttgcttgattatcccttact 42223551  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
     |||||||||| ||||||||||||||  ||||||  ||||||||| |||||    
T  42223552 ccacacatcaagtttgttattggtgtgttttttt--atcgaattcgcaaca 42223600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 11759455 - 11759575
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||||||||| |||||||||||||| ||||||| |||||||| || ||||||||||||    
T  11759455 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatctcttgctccacacatc-aagttgttattggtg 11759551  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | ||||||  |||||||||| |||||    
T  11759552 tgattttt--catcgaattcgcaaca 11759575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 38394314 - 38394434
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||    
T  38394314 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtg 38394410  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | ||||||  ||||||||||||||||    
T  38394411 tgattttt--catcgaattcacaaca 38394434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 20299789 - 20299908
Alignment:
Q  27 gttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 126  Q
    ||||||||||||||||||||||| ||||  ||||||||||||||||||||| |||||||||||||| ||||||| |||||||| || |||||||||||||    
T  20299789 gttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatctcttgctccacacatc-aagttgttattggtgt 20299885  T
Q  127 aattttttccatcgaattcacaaca 151  Q
     ||||||  |||| |||||||||||    
T  20299886 gattttt--catcaaattcacaaca 20299908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 26 - 149
Target Start/End: Original strand, 3036052 - 3036170
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||||||||| |||||||||||||| ||||||| || |||||||| ||||||||||||    
T  3036052 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatctcttgctccaaacatcaaa-ttgttattggtg 3036148  T
Q  126 taattttttccatcgaattcacaa 149  Q
    | |||| |  ||||||||||||||    
T  3036149 tgatttct--catcgaattcacaa 3036170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 151
Target Start/End: Original strand, 24465832 - 24465975
Alignment:
Q  3 gtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttc 102  Q
    ||||||||||||  ||| ||||||| |||||||||||||||| ||||| |||||| |  |||||||||||||||| |||||||||| |||  |||| | |    
T  24465832 gtgttctctctttcttt-tctctcgctgttttctacttttggtttgtgattataact--tccatacactttgttttggttgcttgaatatcacttgttcc 24465928  T
Q  103 acacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    ||||||||||||| |||||||||| ||||||  ||||||||||||||||    
T  24465929 acacatcaaatttattattggtgtgattttt--catcgaattcacaaca 24465975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 133
Target Start/End: Complemental strand, 7471941 - 7471837
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||    
T  7471941 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtg 7471845  T
Q  126 taattttt 133  Q
    | ||||||    
T  7471844 tgattttt 7471837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 31 - 152
Target Start/End: Complemental strand, 43253472 - 43253357
Alignment:
Q  31 ttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 130  Q
    ||||||||||||| ||||| ||||  ||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||| ||||||||||||| |||    
T  43253472 ttttctacttttgacttgtattta--attgttccatacactttgttttggttgcttgattatctcttgctccacacatcaaa-ttgttattggtgtgatt 43253376  T
Q  131 ttttccatcgaattcacaacag 152  Q
    ||   |||||||||| ||||||    
T  43253375 tt---catcgaattcgcaacag 43253357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 48457981 - 48458100
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||| ||||| ||||  ||||||||||||||||||||| |||||||||||||| ||||||| |||||||| || ||||||||||||    
T  48457981 cgttgttttctacttttgacttgtattta--attgttccatacactttgttttggttgcttgattatctcttgctccacacatc-aagttgttattggtg 48458077  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | |||||   |||||||||| |||||    
T  48458078 tgatttt---catcgaattcgcaaca 48458100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 151
Target Start/End: Original strand, 7188853 - 7188979
Alignment:
Q  21 tctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttat 120  Q
    ||||||| ||||||||||||||| ||||||||||||| |  |||||||||||||||| ||||||||||||||| |||||| |||||||||| | | ||||    
T  7188853 tctctcgctgttttctacttttg-cttgtgtttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttat 7188949  T
Q  121 tggtgtaattttttccatcgaattcacaaca 151  Q
    || ||| |||||||  |||||||||||||||    
T  7188950 tgatgtgatttttt-gatcgaattcacaaca 7188979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 25542856 - 25542976
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||  ||||||||||||| ||||||| | ||||||||||||  |||||| |||||||| || ||||||||||||    
T  25542856 cgttgttttctacttttggcttgtattta--attgttccatacattttgttttgattgcttgattatcccttgctccacacatc-aagttgttattggtg 25542952  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | ||||||  ||||||||||||||||    
T  25542953 tgattttt--catcgaattcacaaca 25542976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 28485893 - 28486013
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||  ||||||||||||| ||||||| ||||||||||||||  |||||| |||| ||| || ||||||||||||    
T  28485893 cgttgttttctacttttggcttgtattta--attgttccatacattttgttttggttgcttgattatcccttgctccacatatc-aagttgttattggtg 28485989  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | ||||||  ||||||||||||||||    
T  28485990 tgattttt--catcgaattcacaaca 28486013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 26 - 150
Target Start/End: Original strand, 28487881 - 28488000
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||| ||||| ||||  ||||||||||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||    
T  28487881 cgttgttttctacttttgacttgtattta--attgttccatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtg 28487977  T
Q  126 taattttttccatcgaattcacaac 150  Q
    | ||||||  |||||||||| ||||    
T  28487978 tgattttt--catcgaattcgcaac 28488000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 40836704 - 40836583
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||||||||| ||||| ||||||||  |||||| |||||||| || ||||||||||||    
T  40836704 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgtttgattatcccttgctccacacatc-aagttgttattggtg 40836608  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | | |||||| ||||||||| |||||    
T  40836607 tga-tttttcgatcgaattcgcaaca 40836583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 27832632 - 27832488
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||| ||||||  |||||||| |  |||||||||||||||| ||||| |||||| |  |||||||||||||||| |||| |||||||||||| ||||    
T  27832632 ttgtgttatctctttctttctctcac--tgttttctacttttggtttgtgattataact--tccatacactttgttttggttacttgattatttcctgct 27832537  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
     ||||||| || |||||||||||| | ||||||  ||||||||||||||||    
T  27832536 ccacacattaagtttgttattggtatgattttt--catcgaattcacaaca 27832488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 24748891 - 24749035
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||  ||||||||  |||||||||||||||||  ||||| |||||| |  |||||||||||||||| ||||| ||||||||  ||||||    
T  24748891 ttgtgttctctctttatttctctc--gttgttttctacttttgt-ttgtgattataact--tccatacactttgttttggttgtttgattatcccttgct 24748985  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
     |||||||||| ||||||||||||||  |||| | ||||||||||||||||    
T  24748986 ccacacatcaagtttgttattggtgtggttttct-catcgaattcacaaca 24749035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 1606707 - 1606827
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||  ||||| |||||||| |||||||| |||||||| |||||  |||||| |||||||| || ||||||||||||    
T  1606707 cgttgttttctacttttggcttgtatt--taattattccatacgctttgttttggttgcttaattatcccttgctccacacatc-aagttgttattggtg 1606803  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | ||||||  ||||||||||||||||    
T  1606804 tgattttt--catcgaattcacaaca 1606827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 7469983 - 7469864
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||  |||||||||||||||||||||  |||||||||||| | | |||| ||||||||||| ||||||||||||    
T  7469983 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttagttgcttgatta-tccctgctccacacatcaaa-ttgttattggtg 7469888  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | ||||||  |||||||||| |||||    
T  7469887 tgattttt--catcgaattcgcaaca 7469864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 9027154 - 9027034
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||||| | |  |||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||    
T  9027154 cgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtg 9027058  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | ||||||  |||||||||| |||||    
T  9027057 tgattttt--catcgaattcgcaaca 9027034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 152
Target Start/End: Original strand, 2935596 - 2935717
Alignment:
Q  26 cgttgttttctactttt-ggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggt 124  Q
    ||||||||||||||||| ||||||| ||||  |||||||||||| |||||||| |||||||| |||||  ||||||||||||||| || |||||||||||    
T  2935596 cgttgttttctactttttggcttgtattta--attgttccatacgctttgttttggttgcttaattatcccttgcttcacacatc-aagttgttattggt 2935692  T
Q  125 gtaattttttccatcgaattcacaacag 152  Q
    || |||||   |||||||||||||||||    
T  2935693 gtgatttt---catcgaattcacaacag 2935717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 7351612 - 7351491
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| |||||||   || |||||||||||||| |||||||| |||||  ||| || |||||||| || ||||||||||||    
T  7351612 cgttgttttctacttttggcttgtatttataa--ctttcatacactttgttttggttgcttaattatcccttactccacacatc-aagttgttattggtg 7351516  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | ||||||| ||||||||||||||||    
T  7351515 tgatttttt-catcgaattcacaaca 7351491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 20626334 - 20626481
Alignment:
Q  1 ttgtgttctctcttctttt-ctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttg 98  Q
    |||||||||||| |||||| ||||| | ||||||||||||||||||||| | ||||||| |  |||||||||||| ||| |||||||||||||| |||||    
T  20626334 ttgtgttctctcatctttttctctcgctgttgttttctacttttggcttatatttataact--tccatacactttattttggttgcttgattatctcttg 20626431  T
Q  99 cttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    || |||||||| |  ||||||||||||| ||||||  |||||||||| |||||    
T  20626432 ctccacacatc-aggttgttattggtgtgattttt--catcgaattcgcaaca 20626481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 20630225 - 20630372
Alignment:
Q  1 ttgtgttctctcttctttt-ctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttg 98  Q
    |||||||||||| |||||| ||||| | ||||||||||||||||||||| | ||||||| |  |||||||||||| ||| |||||||||||||| |||||    
T  20630225 ttgtgttctctcatctttttctctcgctgttgttttctacttttggcttatatttataact--tccatacactttattttggttgcttgattatctcttg 20630322  T
Q  99 cttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    || |||||||| |  ||||||||||||| ||||||  |||||||||| |||||    
T  20630323 ctccacacatc-aggttgttattggtgtgattttt--catcgaattcgcaaca 20630372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 20642644 - 20642791
Alignment:
Q  1 ttgtgttctctcttctttt-ctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttg 98  Q
    |||||||||||| |||||| ||||| | ||||||||||||||||||||| | ||||||| |  |||||||||||| ||| |||||||||||||| |||||    
T  20642644 ttgtgttctctcatctttttctctcgctgttgttttctacttttggcttatatttataact--tccatacactttattttggttgcttgattatctcttg 20642741  T
Q  99 cttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    || |||||||| |  ||||||||||||| ||||||  |||||||||| |||||    
T  20642742 ctccacacatc-aggttgttattggtgtgattttt--catcgaattcgcaaca 20642791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 1850310 - 1850411
Alignment:
Q  27 gttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 126  Q
    ||||||||||||||||||||||| ||||  |||||| |||||||||||||| ||||||||||||||  |||||| |||||||| || |||||||||||||    
T  1850310 gttgttttctacttttggcttgtattta--attgtttcatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgt 1850406  T
Q  127 aattt 131  Q
     ||||    
T  1850407 gattt 1850411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 35959 - 36059
Alignment:
Q  28 ttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgta 127  Q
    ||||||||||||||||| |||| ||||  ||||||||||||||||||||| ||||||||||||||  |||||| |||||||| || |||||||||||||     
T  35959 ttgttttctacttttggtttgtattta--attgttccatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtg 36055  T
Q  128 attt 131  Q
    ||||    
T  36056 attt 36059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 152
Target Start/End: Original strand, 44892 - 45013
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    ||||||||||||||||| |||||| ||||  ||||||||||||||||||||| ||||||||||||||   ||||| |||||||| || ||||||||||||    
T  44892 cgttgttttctactttttgcttgtattta--attgttccatacactttgttttggttgcttgattatccattgctccacacatc-aagttgttattggtg 44988  T
Q  126 taattttttccatcgaattcacaacag 152  Q
    | |||| |  |||||||||| ||||||    
T  44989 tgatttct--catcgaattcgcaacag 45013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 7094421 - 7094301
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||| ||||| ||||  ||||||||| ||||||| ||| |||||||||| |||  |||||| |||||||||| |||||||||||||    
T  7094421 cgttgttttctacttttgacttgtattta--attgttccacacactttattttggttgcttgactatgccttgctccacacatcaagtttgttattggtg 7094324  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | |||||   |||||||||| |||||    
T  7094323 tgatttt---catcgaattcgcaaca 7094301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 26 - 111
Target Start/End: Original strand, 18345869 - 18345952
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaa 111  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||||||||| |||||||||| |||  |||||| ||||||||||    
T  18345869 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgactatcccttgctccacacatcaa 18345952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 22394019 - 22394161
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||||||||||  ||||||  |||||||||||||||||||| ||||| ||||||   ||||||||||||||||| ||||| |||| |||  ||||||    
T  22394019 ttgtgttctctctttctttctc--tcgttgttttctacttttggtttgtgattataa--cttccatacactttgttttggttgtttgactatcacttgct 22394114  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
       |||||||| ||| ||||||||| |||||||  ||||||||||||||||    
T  22394115 --ccacatcaagtttattattggtggaattttt--catcgaattcacaaca 22394161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 31 - 132
Target Start/End: Original strand, 38396972 - 38397070
Alignment:
Q  31 ttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 130  Q
    ||||||||||||||||||| ||||  ||||||| ||||||||||||| |||||||| |||||  |||||| |||||||| || ||||||||||||| |||    
T  38396972 ttttctacttttggcttgtattta--attgttctatacactttgttttggttgctttattatcccttgctccacacatc-aagttgttattggtgtgatt 38397068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 132
Target Start/End: Complemental strand, 7092172 - 7092070
Alignment:
Q  28 ttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgta 127  Q
    |||||||||||||||| ||| | ||||  ||||||||| ||||||| ||| |||||||||| |||  |||||| |||||||||| ||||||||||||||     
T  7092172 ttgttttctacttttgacttatattta--attgttccacacactttattttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtg 7092075  T
Q  128 atttt 132  Q
    |||||    
T  7092074 atttt 7092070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 133
Target Start/End: Original strand, 26295764 - 26295869
Alignment:
Q  25 tcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggt 124  Q
    ||||||||||||||||||||||||||||||||||  || |||||||||||||| | ||||||||||||  | |||| || ||||||| | | ||||||||    
T  26295764 tcgttgttttctacttttggcttgtgtttataat--tttcatacactttgttttgattgcttgattatcacgtgctccatacatcaagtat-ttattggt 26295860  T
Q  125 gtaattttt 133  Q
    || ||||||    
T  26295861 gtgattttt 26295869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 151
Target Start/End: Original strand, 40946663 - 40946777
Alignment:
Q  31 ttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 130  Q
    ||||||| ||||||||||| ||||  |||||| |||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||| ||| |||    
T  40946663 ttttctatttttggcttgtattta--attgtttcatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattgatgtgatt 40946759  T
Q  131 ttttccatcgaattcacaaca 151  Q
     |   ||||||||||||||||    
T  40946760 ct---catcgaattcacaaca 40946777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 7349237 - 7349117
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    ||||||||| |||||||||||||| ||||||| | |  |||||||||| ||| |||||||| |||||  ||| || |||||||||| || ||||||||||    
T  7349237 cgttgtttt-tacttttggcttgtatttataacttt--catacactttattttggttgcttaattatcccttactccacacatcaagtt-gttattggtg 7349142  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | |||||||| |||||||||||||||    
T  7349141 tgattttttc-atcgaattcacaaca 7349117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 20091149 - 20091043
Alignment:
Q  2 tgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttc-ggttgcttgattatttcttgct 100  Q
    |||||||||||||  ||| ||||||||||||||||||||||  |||||| ||||||   ||||||||||||||| || ||||||||||||||| ||||||    
T  20091149 tgtgttctctctttctttttctctcgttgttttctactttt-acttgtg-ttataa--cttccatacactttgtatctggttgcttgattattacttgct 20091054  T
Q  101 tcacacatcaa 111  Q
      |||||||||    
T  20091053 caacacatcaa 20091043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 111
Target Start/End: Original strand, 3878911 - 3878990
Alignment:
Q  31 ttttctacttttggcttgtgtttataattgttccatacacttt-gtttcggttgcttgattatttcttgcttcacacatcaa 111  Q
    |||||||||||||| |||| ||||  ||||||||||||| ||| |||| |||||||||||||| ||||||| ||||||||||    
T  3878911 ttttctacttttggtttgtattta--attgttccatacatttttgttttggttgcttgattatctcttgctccacacatcaa 3878990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 151
Target Start/End: Complemental strand, 24813490 - 24813348
Alignment:
Q  2 tgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgct 100  Q
    |||||||||||||| ||| |||||||||||||||||||||| | || |||||||||||||| |   ||| ||| | | ||||||||||||||| ||||||    
T  24813490 tgtgttctctcttccttt-tctctcgttgttttctactttt-gtttatgtttataattgttac---cacgttgatattggttgcttgattattacttgct 24813396  T
Q  101 tcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
     |||||||||| | | |||||| ||| |||||   ||||||| ||||||||    
T  24813395 ccacacatcaagtattttattgatgtgatttt---catcgaactcacaaca 24813348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 100
Target Start/End: Original strand, 6349112 - 6349188
Alignment:
Q  21 tctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgct 100  Q
    ||||||| | ||||||||||||| ||||||||||||| |  ||| |||||||||||| ||||||||||||||| ||||||    
T  6349112 tctctcgctattttctacttttg-cttgtgtttataact--tccgtacactttgttttggttgcttgattattacttgct 6349188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 151
Target Start/End: Original strand, 22137411 - 22137527
Alignment:
Q  31 ttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 129  Q
    |||||||||||||||| || ||  | ||| |||||||| ||||| ||| |||||||| ||||| ||||||| |||||||| || ||||||||||||| ||    
T  22137411 ttttctacttttggctcgtatt--ttattattccatacgctttgattttggttgcttaattatctcttgctccacacatc-aagttgttattggtgtgat 22137507  T
Q  130 tttttccatcgaattcacaaca 151  Q
    ||||  | ||||||||||||||    
T  22137508 tttt--cgtcgaattcacaaca 22137527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 151
Target Start/End: Original strand, 40552438 - 40552554
Alignment:
Q  31 ttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 129  Q
    |||||||||||||||| || ||  | ||| |||||||| ||||| ||| |||||||| ||||| ||||||| |||||||| || ||||||||||||| ||    
T  40552438 ttttctacttttggctcgtatt--ttattattccatacgctttgattttggttgcttaattatctcttgctccacacatc-aagttgttattggtgtgat 40552534  T
Q  130 tttttccatcgaattcacaaca 151  Q
    ||||  | ||||||||||||||    
T  40552535 tttt--cgtcgaattcacaaca 40552554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 16296998 - 16296932
Alignment:
Q  21 tctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgatt 90  Q
    |||||||| |||||||||||||| |||||||||||||||||  ||  |||||||||| ||||||||||||    
T  16296998 tctctcgtcgttttctacttttg-cttgtgtttataattgt--cagccactttgttttggttgcttgatt 16296932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 135
Target Start/End: Complemental strand, 1046868 - 1046772
Alignment:
Q  39 ttttggcttgtgtttataattgttccat-acactttgtttc--ggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttc 135  Q
    ||||||||||| ||||||| |  ||||| |||||||||||   |||||||||||||| ||||||| |||||||| || ||||||||||||| ||||||||    
T  1046868 ttttggcttgtatttataact--tccattacactttgttttttggttgcttgattatctcttgctccacacatc-aagttgttattggtgtgattttttc 1046772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 25276426 - 25276567
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtt-tcggttgcttgattatttcttgc 99  Q
    |||||||||||||| |||||||||  ||||||||||||||||  ||||||||||  ||||||  || ||||||| | | |||||||||||||   ||||     
T  25276426 ttgtgttctctctttttttctctc--gttgttttctactttttacttgtgttta--attgtt--atccactttgatattggttgcttgattaa--cttga 25276517  T
Q  100 ttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaacag 152  Q
    | |||||||||| || ||||||||||| |||||||  | ||||||||||||||    
T  25276518 tccacacatcaagtt-gttattggtgtgatttttt--agcgaattcacaacag 25276567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 135
Target Start/End: Complemental strand, 1049239 - 1049144
Alignment:
Q  39 ttttggcttgtgtttataattgttccatacactttgtttc--ggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttc 135  Q
    ||||||||||| ||||||| | |  ||||||||||||||   |||||||||||||| ||||||| |||||||| || ||||||||||||| | ||||||    
T  1049239 ttttggcttgtatttataacttt--catacactttgttttttggttgcttgattatctcttgctccacacatc-aagttgttattggtgtgaatttttc 1049144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 151
Target Start/End: Complemental strand, 20137062 - 20136991
Alignment:
Q  79 ggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    |||||||||| |||  |||||| |||||||||||||| ||||| || | ||||||| ||||||||||||||||    
T  20137062 ggttgcttgactatcccttgctccacacatcaaatttattattcgtatgatttttt-catcgaattcacaaca 20136991  T

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Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 151
Target Start/End: Original strand, 40550161 - 40550277
Alignment:
Q  31 ttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 129  Q
    |||||||||||||||| || ||  | ||| |||||||| ||||| ||| |||||||| |||||  |||||| |||||||| || ||||||||||||| ||    
T  40550161 ttttctacttttggctcgtatt--ttattattccatacgctttgattttggttgcttaattatcccttgctccacacatc-aagttgttattggtgtgat 40550257  T
Q  130 tttttccatcgaattcacaaca 151  Q
    ||||  | ||||||||||||||    
T  40550258 tttt--cgtcgaattcacaaca 40550277  T

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Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 6046793 - 6046848
Alignment:
Q  4 tgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgtt 62  Q
    |||||||||| ||||| ||||||||| |||||||||||| |||||||||||||||||||    
T  6046793 tgttctctct-ctttt-tctctcgtttttttctactttt-gcttgtgtttataattgtt 6046848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 151
Target Start/End: Complemental strand, 1502883 - 1502816
Alignment:
Q  80 gttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    ||||||||||||| ||||||| |||||||| || ||||||||||||| |||||   ||| ||||||||||||    
T  1502883 gttgcttgattatctcttgctccacacatc-aagttgttattggtgtgatttt---cattgaattcacaaca 1502816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 2990612 - 2990569
Alignment:
Q  13 ttcttttctctctcgttgttttctacttttggcttgtgtttataa 57  Q
    |||| |||||||||||||||||||| |||| ||||||||||||||    
T  2990612 ttctcttctctctcgttgttttctaatttt-gcttgtgtttataa 2990569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 20137102 - 20137061
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttgg 44  Q
    ||||||||||||||||||||  ||||| ||||||||||||||||    
T  20137102 ttgtgttctctcttcttttc--tctcgctgttttctacttttgg 20137061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 90; Significance: 1e-43; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 50307 - 50457
Alignment:
Q  1 ttgtgttct-ctcttctttt-ctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttg 98  Q
    ||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||  ||||    
T  50307 ttgtgttcttctcttctttttctctctagttgttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgcttgattatcccttg 50406  T
Q  99 cttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    || |||||||||| |||||||||||||| ||||||  |||||||||| |||||    
T  50407 ctccacacatcaagtttgttattggtgtgattttt--catcgaattcgcaaca 50457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 52306 - 52456
Alignment:
Q  1 ttgtgttct-ctcttctttt-ctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttg 98  Q
    ||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||  ||||    
T  52306 ttgtgttcttctcttctttttctctctagttgttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgcttgattatcccttg 52405  T
Q  99 cttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    || |||||||||| |||||||||||||| ||||||  |||||||||| |||||    
T  52406 ctccacacatcaagtttgttattggtgtgattttt--catcgaattcgcaaca 52456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 131
Target Start/End: Complemental strand, 183602 - 183500
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||  ||||||||||||| |||||||||||||||||||||| ||||||| |||||||| || ||||||||||||    
T  183602 cgttgttttctacttttggcttgtattta--attgttccatacattttgtttcggttgcttgattatctcttgctccacacatc-aagttgttattggtg 183506  T
Q  126 taattt 131  Q
    | ||||    
T  183505 tgattt 183500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 85526 - 85667
Alignment:
Q  1 ttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgc 99  Q
    ||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||| |||||||| ||||||    
T  85526 ttgtgttctctcttcttttctc--tcgttgttttctacttttgacttgtgtttataattgttccatacactttgattttggttgtttgattatctcttgc 85623  T
Q  100 ttcacacatcaaatttgttattggtgtaattttttccatcgaattc 145  Q
    | ||||||| ||  ||||||||||||| ||||||  ||||||||||    
T  85624 tccacacattaagattgttattggtgtgattttt--catcgaattc 85667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 35889 - 36033
Alignment:
Q  1 ttgtgttctctcttcttttctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttg 98  Q
    |||||||||||||||||||||||| | ||||||||| | |||||||||||||||||||||||| ||||||||||| ||| |||||||||| |||  ||||    
T  35889 ttgtgttctctcttcttttctctcgctgttgttttcgagttttggcttgtgtttataattgtttcatacactttgtttttggttgcttgactatcccttg 35988  T
Q  99 cttcacacatcaaatttgttattggtgtaattttttccatcgaattc 145  Q
    || |||||||||| |||||||||||||||||||||  ||||||||||    
T  35989 ctccacacatcaagtttgttattggtgtaattttt--catcgaattc 36033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 80154 - 80282
Alignment:
Q  1 ttgtgttctctcttc-ttttctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttctt 97  Q
    ||||| ||||||||| ||||||||| | ||||||||||||||||||||||||||||||||| |||||||||||||| |||  ||||| |||||||| |||    
T  80154 ttgtgatctctcttccttttctctcgctgttgttttctacttttggcttgtgtttataatttttccatacactttgattttcgttgcctgattattactt 80253  T
Q  98 gcttcacacatcaaatttgttattggtgt 126  Q
    ||| |||||||||| ||||||||||||||    
T  80254 gctccacacatcaagtttgttattggtgt 80282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 79480 - 79615
Alignment:
Q  1 ttgtgttctctcttctttt-ctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttctt 97  Q
    ||||||||||||||||||| ||||  | |||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| | |||||  |||    
T  79480 ttgtgttctctcttctttttctcttgctgttgttttctacttttggcttgtgattataattgttccatacactttgattttggttgcctaattatccctt 79579  T
Q  98 gcttcacacatcaaatttgttattggtgtaattttt 133  Q
    ||| |||||||||| |||||||||||||| ||||||    
T  79580 gctccacacatcaagtttgttattggtgtgattttt 79615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 151
Target Start/End: Complemental strand, 1634 - 1493
Alignment:
Q  2 tgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgctt 101  Q
    |||||||||||||  ||| |||||| ||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||||| ||||||     
T  1634 tgtgttctctctttcttt-tctctcattgttttctacttttggcttgtgtttataa--cttccatacactttgttt-ggttgcttgattattacttgctc 1539  T
Q  102 cacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 151  Q
    |||||||||||| | |||||||||| |||||   ||| ||||||||||||    
T  1538 cacacatcaaatat-ttattggtgtgatttt---cattgaattcacaaca 1493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 41444 - 41325
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||||||||| | |||||||||||| ||||||| |||||||| || ||||||||||||    
T  41444 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttgattgcttgattatctcttgctccacacatc-aagttgttattggtg 41348  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | |||||   ||||||||||||||||    
T  41347 tgatttt---catcgaattcacaaca 41325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1674 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold1674
Description:

Target: scaffold1674; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 26 - 149
Target Start/End: Complemental strand, 1412 - 1294
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||||||||| |||||||||||||| | || || |||||||| || ||||||||||||    
T  1412 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatctttttctccacacatc-aagttgttattggtg 1316  T
Q  126 taattttttccatcgaattcacaa 149  Q
    | ||||||  ||||||||||||||    
T  1315 tgattttt--catcgaattcacaa 1294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 26 - 152
Target Start/End: Complemental strand, 69253 - 69132
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||||| ||||||| |  |||||||| ||||||| |||||| |||||||  |||||| |||||||||| |||||||||||||    
T  69253 cgttgttttctacttttggcttgtatttataact--tccatacattttgttttggttgcctgattatcccttgctccacacatcaagtttgttattggtg 69156  T
Q  126 taattttttccatcgaattcacaacag 152  Q
    | |||||   |||||||||||||||||    
T  69155 tgatttt---catcgaattcacaacag 69132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 11466 - 11315
Alignment:
Q  1 ttgtgttctctcttctttt-ctctctc-gttgttttctacttttggcttgtgtttataattgttccatacactt--tgtttcggttgcttgattatttct 96  Q
    ||||||||||||||||||| ||||| | |||||||||||||||||||||||| |||||||||||||||||||||  | |||  ||||||| |||||| ||    
T  11466 ttgtgttctctcttctttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacactttattttttcgttgcttaattattcct 11367  T
Q  97 tgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaac 150  Q
    | || |||||||| || ||||||||||||| || |||| |||||||||| ||||    
T  11366 tactccacacatc-aagttgttattggtgtgatatttt-catcgaattcgcaac 11315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0370 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0370
Description:

Target: scaffold0370; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 1408 - 1308
Alignment:
Q  31 ttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 130  Q
    ||||||||||||||||||| ||||  |||||| |||||||||||||| |||||||||||||| ||||||| |||||||| || ||||||||||||| |||    
T  1408 ttttctacttttggcttgtattta--attgttacatacactttgttttggttgcttgattatctcttgctccacacatc-aagttgttattggtgtgatt 1312  T
Q  131 tttt 134  Q
    ||||    
T  1311 tttt 1308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 12835 - 12715
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    ||||||| |||||||||||||||| ||||||| | |  |||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||    
T  12835 cgttgttgtctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtg 12739  T
Q  126 taattttttccatcgaattcacaaca 151  Q
    | ||||||  ||||||||||||||||    
T  12738 tcattttt--catcgaattcacaaca 12715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 21 - 122
Target Start/End: Original strand, 4309 - 4410
Alignment:
Q  21 tctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttat 120  Q
    ||||||| ||||||||||||||||||||||||||||||| ||| ||||||||  ||| | ||||||||||||  ||| || |||||||||| ||||||||    
T  4309 tctctcgctgttttctacttttggcttgtgtttataattattctatacacttcattttgattgcttgattatcccttactccacacatcaagtttgttat 4408  T
Q  121 tg 122  Q
    ||    
T  4409 tg 4410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 26 - 152
Target Start/End: Original strand, 29497 - 29617
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 125  Q
    |||||||||||||||||||||| | ||||  ||||||||||||||||||||| | ||||||||||||  |||||| |||||||| || ||||||||||||    
T  29497 cgttgttttctacttttggcttttattta--attgttccatacactttgttttgattgcttgattatcccttgctccacacatc-aagttgttattggtg 29593  T
Q  126 taattttttccatcgaattcacaacag 152  Q
    | |||||   |||||||||| ||||||    
T  29594 tgatttt---catcgaattcgcaacag 29617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 6526 - 6646
Alignment:
Q  26 cgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggt 124  Q
    |||||||||||||||||||||||| |||   ||| |||||||| ||||| ||| |||||||| |||||  |||||| |||||||| || |||||||||||    
T  6526 cgttgttttctacttttggcttgtattt---attattccatacgctttgattttggttgcttaattatcccttgctccacacatc-aagttgttattggt 6621  T
Q  125 gtaattttttccatcgaattcacaaca 151  Q
    || ||||||  ||||||||||||||||    
T  6622 gtgattttt--catcgaattcacaaca 6646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 21 - 151
Target Start/End: Complemental strand, 16624 - 16501
Alignment:
Q  21 tctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttat 120  Q
    ||||||||||||||||| ||||| ||||| ||||||| |  ||||| |||||||||| | ||||||||||||| |||||| |||||||||| | | ||||    
T  16624 tctctcgttgttttctatttttg-cttgtatttataact--tccatgcactttgtttag-ttgcttgattattacttgctccacacatcaagtattttat 16529  T
Q  121 tggtgtaattttttccatcgaattcacaaca 151  Q
    |||| ||||||||   |||||||||||||||    
T  16528 tggtataattttt---atcgaattcacaaca 16501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 151
Target Start/End: Original strand, 357 - 473
Alignment:
Q  31 ttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 129  Q
    ||||||||||||||||||| ||||  |||||||||||| ||||| ||| ||||||||||||||  |||||| |||||||| || ||||||||||||| ||    
T  357 ttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgat 453  T
Q  130 tttttccatcgaattcacaaca 151  Q
    || |  || |||||||||||||    
T  454 ttct--caacgaattcacaaca 473  T

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Target: scaffold0891 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0891
Description:

Target: scaffold0891; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 28 - 132
Target Start/End: Complemental strand, 4636 - 4535
Alignment:
Q  28 ttgttttctacttttggcttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgta 127  Q
    |||||||||||||||||||||| ||||  |||||||||||| |||||  |  |||||||||||||  ||| || ||||||||||| |||||||||||||     
T  4636 ttgttttctacttttggcttgtattta--attgttccatacgctttgactttgttgcttgattatcccttactccacacatcaaa-ttgttattggtgtg 4540  T
Q  128 atttt 132  Q
    |||||    
T  4539 atttt 4535  T

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Target: scaffold0250 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 148
Target Start/End: Original strand, 3206 - 3322
Alignment:
Q  26 cgttgttttctacttttgg-cttgtgtttataattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggt 124  Q
    ||||||||||||||||| | ||||| ||||||| | |  |||||||||||||| ||||||||||||||  |||||| |||||||| || |||||||||||    
T  3206 cgttgttttctactttttgacttgtatttataacttt--catacactttgttt-ggttgcttgattatcccttgctccacacatc-aagttgttattggt 3301  T
Q  125 gtaattttttccatcgaattcaca 148  Q
    || |||||   |||||||||||||    
T  3302 gtgatttt---catcgaattcaca 3322  T

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Target: scaffold0140 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 151
Target Start/End: Original strand, 24723 - 24839
Alignment:
Q  31 ttttctacttttggcttgtgtttataattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 129  Q
    |||||||||||||||| || ||  | ||| |||||||| ||||| ||| |||||||| |||||  |||||| |||||||| || ||||||||||||| ||    
T  24723 ttttctacttttggctcgtatt--ttattattccatacgctttgattttggttgcttaattatcccttgctccacacatc-aagttgttattggtgtgat 24819  T
Q  130 tttttccatcgaattcacaaca 151  Q
    ||||  | ||||||||||||||    
T  24820 tttt--cgtcgaattcacaaca 24839  T

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