View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11361_high_6 (Length: 314)
Name: NF11361_high_6
Description: NF11361
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11361_high_6 |
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Alignment Details
Target: chr2 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 2800881 - 2801197
Alignment:
| Q |
1 |
tatttgttctattaatttatgaatgtcatttgatgccatatcacatgcacttttccttgttataactattgacaaaggacacataggtgaatgaatagtt |
100 |
Q |
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| T |
2800881 |
tatttgttctattaatttatgaatgtcatttgatgccatatcacatgcactttttctttttataactattgacaaaggacacataggtgaatgaatagtt |
2800980 |
T |
|
| Q |
101 |
caactccatattccaccaaatcaaggtct-----tgtggttgtgtcctctacttttaggattgagtggaaacagtgacataacatatgtagtgaatatga |
195 |
Q |
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||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2800981 |
caactccatattccaccaaatcaaggtcttgtggtgtggttgtgtcctctacttttaggattgagtggaaacagtgacataacatatgtagtgaatatga |
2801080 |
T |
|
| Q |
196 |
ctgtt----tcagctgatcaaattctctgccttttgttgcttctttccagcacactcactggagtttcagtgctaaaaaagcttgtatctttcattgacc |
291 |
Q |
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|| || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
2801081 |
ctatttccctcagctgatcaaattctctgccttttggtgcttctttccagcacactcactggagtttcagtgcttaaaaagcttgtatctttcattgacc |
2801180 |
T |
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| Q |
292 |
cttttacttcatctctc |
308 |
Q |
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|||||||||||| |||| |
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| T |
2801181 |
cttttacttcatttctc |
2801197 |
T |
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