View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11362_low_14 (Length: 268)
Name: NF11362_low_14
Description: NF11362
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11362_low_14 |
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Alignment Details
Target: chr8 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 1444163 - 1444409
Alignment:
| Q |
1 |
tatggcaaagtattattgataatgacaatcatgtattatttatacattagtgtatatggactttgtgtactaggcaaacagtaacatgacgacagtataa |
100 |
Q |
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| T |
1444163 |
tatggcaaagtattattgataatgacaatcatgtattatttatacattagtgtatatggactttgtgtactaggcaaacagtaacatgacgacagtataa |
1444262 |
T |
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| Q |
101 |
caaaaaattgatatatgagcaaggcttgacttatatatatatgcaatgaaaacagggtttgatttaccacaatcacaatgaaaactttatagttcatgaa |
200 |
Q |
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| T |
1444263 |
caaaaaattgatatatgagcaaggcttgact--tatatatatgcaatgaaaac--ggtttgatttaccacaatcacaatgaaaactttatagttcatgaa |
1444358 |
T |
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| Q |
201 |
aataagctaaagttgttcttaaaagttggaaaattgtgtttgggaaagagg |
251 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
1444359 |
aataagctaaagttgttcttaaaagttggaaaattgtgtttggtaaagagg |
1444409 |
T |
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