View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11363_high_2 (Length: 482)

Name: NF11363_high_2
Description: NF11363
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11363_high_2
NF11363_high_2
[»] chr7 (55 HSPs)
chr7 (20-167)||(56330-56477)
chr7 (20-167)||(20478042-20478189)
chr7 (20-167)||(27666042-27666189)
chr7 (23-173)||(29996494-29996644)
chr7 (48-167)||(35401969-35402088)
chr7 (48-167)||(35403589-35403708)
chr7 (23-167)||(39859209-39859353)
chr7 (48-167)||(20479689-20479808)
chr7 (20-167)||(37115503-37115650)
chr7 (23-168)||(6602334-6602479)
chr7 (48-168)||(77984-78104)
chr7 (48-164)||(27664433-27664549)
chr7 (20-174)||(24228386-24228540)
chr7 (48-167)||(13169653-13169772)
chr7 (20-167)||(38474120-38474267)
chr7 (31-164)||(34776903-34777036)
chr7 (20-168)||(30940402-30940550)
chr7 (48-167)||(47384294-47384413)
chr7 (47-164)||(37796185-37796302)
chr7 (23-168)||(45359335-45359480)
chr7 (48-164)||(39857648-39857764)
chr7 (20-167)||(47386186-47386333)
chr7 (48-172)||(37113936-37114060)
chr7 (107-166)||(29994907-29994966)
chr7 (48-166)||(24226582-24226700)
chr7 (23-145)||(13168142-13168267)
chr7 (50-168)||(23904582-23904700)
chr7 (52-168)||(38549546-38549662)
chr7 (48-167)||(22155817-22155936)
chr7 (48-167)||(22211732-22211851)
chr7 (50-164)||(48227913-48228027)
chr7 (78-164)||(6605397-6605483)
chr7 (48-167)||(46437107-46437226)
chr7 (106-168)||(23906295-23906357)
chr7 (47-157)||(33038801-33038911)
chr7 (20-121)||(35693347-35693450)
chr7 (47-118)||(366747-366818)
chr7 (60-111)||(7401949-7402000)
chr7 (52-163)||(35691431-35691542)
chr7 (31-130)||(45463707-45463806)
chr7 (47-157)||(46996706-46996816)
chr7 (54-158)||(13039618-13039722)
chr7 (48-167)||(34774998-34775117)
chr7 (48-167)||(45361246-45361365)
chr7 (47-157)||(27955380-27955490)
chr7 (65-157)||(38613503-38613595)
chr7 (69-157)||(47341712-47341800)
chr7 (136-167)||(35693434-35693465)
chr7 (47-117)||(2167529-2167599)
chr7 (47-157)||(23953815-23953925)
chr7 (31-104)||(4322560-4322633)
chr7 (47-120)||(11682828-11682901)
chr7 (115-164)||(13018036-13018085)
chr7 (48-121)||(35344295-35344368)
chr7 (61-157)||(46812600-46812696)
[»] chr8 (58 HSPs)
chr8 (20-171)||(27691150-27691301)
chr8 (20-170)||(27406894-27407044)
chr8 (20-174)||(33708801-33708954)
chr8 (20-167)||(13282478-13282625)
chr8 (20-149)||(15305815-15305944)
chr8 (20-149)||(15486184-15486313)
chr8 (23-167)||(8609787-8609931)
chr8 (23-167)||(13108336-13108480)
chr8 (48-167)||(601674-601793)
chr8 (48-172)||(33762683-33762807)
chr8 (23-167)||(38547228-38547372)
chr8 (78-167)||(29237151-29237240)
chr8 (78-167)||(29239187-29239276)
chr8 (48-175)||(8608229-8608357)
chr8 (20-164)||(42941777-42941921)
chr8 (48-167)||(27692807-27692926)
chr8 (48-167)||(33761069-33761188)
chr8 (48-167)||(38548801-38548920)
chr8 (48-166)||(33707207-33707325)
chr8 (48-167)||(35509214-35509333)
chr8 (48-167)||(35510789-35510908)
chr8 (78-167)||(13106804-13106893)
chr8 (78-167)||(15308261-15308350)
chr8 (78-167)||(15488630-15488719)
chr8 (48-164)||(13283965-13284081)
chr8 (20-164)||(41825641-41825785)
chr8 (20-167)||(41042581-41042728)
chr8 (48-167)||(42943396-42943515)
chr8 (20-169)||(22272332-22272483)
chr8 (20-164)||(26242311-26242455)
chr8 (20-167)||(13486096-13486243)
chr8 (20-167)||(7745109-7745256)
chr8 (48-167)||(26238726-26238845)
chr8 (78-164)||(27404213-27404299)
chr8 (168-229)||(18645752-18645813)
chr8 (86-168)||(34681074-34681156)
chr8 (61-166)||(5036446-5036551)
chr8 (48-167)||(22273861-22273980)
chr8 (48-167)||(41823890-41824009)
chr8 (20-154)||(9673162-9673296)
chr8 (108-168)||(600759-600819)
chr8 (48-167)||(5038032-5038150)
chr8 (99-167)||(13484545-13484613)
chr8 (48-167)||(43262107-43262226)
chr8 (31-157)||(28433704-28433830)
chr8 (47-157)||(31821428-31821538)
chr8 (20-103)||(40339677-40339760)
chr8 (48-167)||(41040720-41040839)
chr8 (47-121)||(11788367-11788441)
chr8 (31-121)||(40020623-40020713)
chr8 (47-157)||(42897778-42897888)
chr8 (47-104)||(37526027-37526084)
chr8 (61-157)||(462388-462484)
chr8 (61-157)||(32822371-32822467)
chr8 (61-157)||(33160166-33160262)
chr8 (47-131)||(33750388-33750472)
chr8 (48-130)||(31201148-31201230)
chr8 (47-104)||(9184446-9184503)
[»] chr5 (39 HSPs)
chr5 (20-167)||(29621758-29621905)
chr5 (20-171)||(42473584-42473735)
chr5 (20-164)||(40780553-40780697)
chr5 (20-167)||(2854304-2854450)
chr5 (20-167)||(24541188-24541336)
chr5 (23-167)||(17574318-17574462)
chr5 (20-168)||(36057590-36057738)
chr5 (23-169)||(7267841-7267987)
chr5 (48-167)||(40782181-40782300)
chr5 (48-167)||(2852886-2853005)
chr5 (78-173)||(7269446-7269541)
chr5 (48-167)||(21842962-21843081)
chr5 (48-167)||(29620138-29620257)
chr5 (20-167)||(34327635-34327782)
chr5 (23-167)||(2179787-2179931)
chr5 (48-167)||(12738706-12738825)
chr5 (48-167)||(12801529-12801648)
chr5 (48-170)||(8541241-8541363)
chr5 (48-165)||(17577905-17578022)
chr5 (23-168)||(30468260-30468405)
chr5 (31-167)||(8539675-8539811)
chr5 (20-164)||(18624985-18625129)
chr5 (78-167)||(30463900-30463989)
chr5 (78-167)||(42471548-42471637)
chr5 (48-167)||(28813735-28813856)
chr5 (48-164)||(28822060-28822176)
chr5 (48-167)||(34328797-34328916)
chr5 (47-157)||(18728606-18728716)
chr5 (76-157)||(43492131-43492212)
chr5 (61-157)||(38596878-38596974)
chr5 (60-111)||(27075876-27075927)
chr5 (47-121)||(32087560-32087634)
chr5 (47-157)||(35395343-35395453)
chr5 (47-157)||(43318064-43318174)
chr5 (78-167)||(32134231-32134320)
chr5 (80-164)||(41493847-41493931)
chr5 (47-157)||(33256410-33256520)
chr5 (60-121)||(19997164-19997225)
chr5 (127-167)||(28819348-28819388)
[»] chr1 (50 HSPs)
chr1 (20-167)||(9121645-9121792)
chr1 (20-167)||(47013059-47013206)
chr1 (20-164)||(33602621-33602765)
chr1 (20-167)||(46583533-46583680)
chr1 (23-167)||(4855946-4856090)
chr1 (23-167)||(34778118-34778262)
chr1 (48-167)||(46582010-46582129)
chr1 (78-167)||(34776569-34776658)
chr1 (48-169)||(37345932-37346053)
chr1 (20-167)||(2869579-2869726)
chr1 (48-167)||(8167942-8168061)
chr1 (48-167)||(8169538-8169657)
chr1 (48-167)||(25276742-25276861)
chr1 (78-167)||(26223587-26223676)
chr1 (23-167)||(6818658-6818802)
chr1 (23-167)||(25278348-25278492)
chr1 (23-167)||(31238475-31238619)
chr1 (48-167)||(9120039-9120158)
chr1 (48-167)||(27089249-27089368)
chr1 (23-170)||(37344339-37344486)
chr1 (20-167)||(27087283-27087430)
chr1 (48-167)||(47011456-47011575)
chr1 (65-174)||(25278975-25279084)
chr1 (20-167)||(51896129-51896276)
chr1 (48-167)||(1444151-1444270)
chr1 (20-167)||(3013447-3013600)
chr1 (78-168)||(4854409-4854499)
chr1 (24-167)||(50556078-50556221)
chr1 (48-167)||(31236819-31236938)
chr1 (50-156)||(33599229-33599335)
chr1 (20-89)||(1442599-1442668)
chr1 (48-167)||(52641888-52642007)
chr1 (48-167)||(2871046-2871165)
chr1 (20-121)||(15104487-15104588)
chr1 (76-164)||(52643648-52643736)
chr1 (48-167)||(37088106-37088225)
chr1 (52-166)||(50554164-50554278)
chr1 (106-167)||(33599187-33599248)
chr1 (106-166)||(1442551-1442611)
chr1 (48-164)||(3011858-3011974)
chr1 (106-166)||(6816866-6816926)
chr1 (87-167)||(25278854-25278934)
chr1 (48-164)||(51894570-51894686)
chr1 (47-157)||(42134492-42134602)
chr1 (78-167)||(23577636-23577725)
chr1 (107-167)||(45044949-45045009)
chr1 (31-104)||(5783427-5783500)
chr1 (61-117)||(18183961-18184017)
chr1 (61-121)||(36895528-36895588)
chr1 (48-121)||(27940654-27940727)
[»] chr4 (50 HSPs)
chr4 (20-168)||(43519423-43519571)
chr4 (48-168)||(4173710-4173830)
chr4 (48-167)||(43507167-43507286)
chr4 (48-167)||(43508623-43508742)
chr4 (20-166)||(49523125-49523271)
chr4 (20-164)||(41761723-41761867)
chr4 (48-168)||(33265980-33266100)
chr4 (48-167)||(319273-319392)
chr4 (48-167)||(5437811-5437930)
chr4 (48-167)||(33264382-33264501)
chr4 (48-167)||(51013856-51013975)
chr4 (48-167)||(833223-833342)
chr4 (48-167)||(5439617-5439736)
chr4 (23-167)||(51011926-51012070)
chr4 (48-167)||(320870-320989)
chr4 (48-167)||(835012-835131)
chr4 (48-167)||(4169686-4169805)
chr4 (20-176)||(41781530-41781686)
chr4 (48-167)||(35401749-35401868)
chr4 (23-167)||(35404425-35404569)
chr4 (20-168)||(48813786-48813934)
chr4 (48-167)||(49524703-49524822)
chr4 (48-157)||(39345574-39345683)
chr4 (48-167)||(20493827-20493946)
chr4 (78-162)||(43521109-43521193)
chr4 (48-167)||(48645255-48645374)
chr4 (20-148)||(48646724-48646852)
chr4 (51-164)||(11601674-11601786)
chr4 (20-118)||(42980684-42980782)
chr4 (48-173)||(11254113-11254238)
chr4 (31-130)||(39083676-39083775)
chr4 (61-157)||(44558511-44558607)
chr4 (31-130)||(5484577-5484676)
chr4 (31-130)||(39921531-39921630)
chr4 (31-130)||(43779855-43779954)
chr4 (55-173)||(2691368-2691485)
chr4 (33-130)||(39189419-39189516)
chr4 (48-121)||(44794765-44794838)
chr4 (56-166)||(20819986-20820096)
chr4 (61-104)||(27624869-27624912)
chr4 (31-130)||(32652136-32652235)
chr4 (48-167)||(42982422-42982541)
chr4 (31-130)||(44994275-44994374)
chr4 (61-148)||(52868167-52868254)
chr4 (47-121)||(35996109-35996183)
chr4 (48-157)||(10372711-10372820)
chr4 (48-121)||(47941857-47941930)
chr4 (76-164)||(2693285-2693373)
chr4 (47-103)||(2827468-2827524)
chr4 (61-121)||(13450998-13451058)
[»] scaffold0058 (3 HSPs)
scaffold0058 (20-167)||(3294-3441)
scaffold0058 (20-167)||(4466-4613)
scaffold0058 (48-167)||(14313-14432)
[»] chr6 (34 HSPs)
chr6 (20-168)||(32455868-32456016)
chr6 (22-149)||(3456766-3456893)
chr6 (20-167)||(13613559-13613706)
chr6 (48-167)||(32518467-32518586)
chr6 (23-167)||(32439071-32439215)
chr6 (48-167)||(3480627-3480746)
chr6 (48-167)||(32454248-32454367)
chr6 (20-166)||(20523367-20523513)
chr6 (23-167)||(32516877-32517021)
chr6 (20-163)||(10568403-10568546)
chr6 (48-167)||(18645074-18645192)
chr6 (20-164)||(7372935-7373079)
chr6 (23-166)||(11355223-11355366)
chr6 (47-167)||(10569888-10570008)
chr6 (48-167)||(13610690-13610808)
chr6 (20-167)||(6899485-6899632)
chr6 (78-167)||(9400035-9400124)
chr6 (48-173)||(11357164-11357289)
chr6 (99-167)||(32437140-32437208)
chr6 (48-179)||(6902868-6902996)
chr6 (20-114)||(9398713-9398807)
chr6 (98-167)||(7371175-7371244)
chr6 (48-176)||(20525304-20525432)
chr6 (106-167)||(8605353-8605414)
chr6 (20-96)||(7049828-7049904)
chr6 (48-152)||(14338480-14338584)
chr6 (61-130)||(3018450-3018519)
chr6 (48-164)||(21068628-21068744)
chr6 (31-130)||(17952030-17952129)
chr6 (106-163)||(7049790-7049847)
chr6 (61-121)||(2968185-2968245)
chr6 (129-164)||(21091109-21091144)
chr6 (42-157)||(35175862-35175977)
chr6 (96-173)||(7051263-7051340)
[»] chr3 (64 HSPs)
chr3 (20-173)||(3152215-3152368)
chr3 (20-167)||(44794208-44794354)
chr3 (20-161)||(2660218-2660359)
chr3 (23-167)||(53190759-53190903)
chr3 (48-167)||(46308807-46308926)
chr3 (23-167)||(27899081-27899225)
chr3 (48-167)||(38193480-38193599)
chr3 (48-167)||(53094243-53094362)
chr3 (48-167)||(54900044-54900163)
chr3 (78-168)||(41979352-41979442)
chr3 (50-167)||(3150252-3150369)
chr3 (42-167)||(41977750-41977875)
chr3 (23-167)||(2226152-2226296)
chr3 (20-124)||(19987591-19987695)
chr3 (20-167)||(21348723-21348870)
chr3 (48-167)||(38191895-38192014)
chr3 (48-167)||(53187742-53187861)
chr3 (31-167)||(54898437-54898573)
chr3 (48-167)||(46310406-46310525)
chr3 (48-167)||(46611273-46611392)
chr3 (20-167)||(51684610-51684757)
chr3 (78-167)||(44795890-44795979)
chr3 (20-168)||(30599915-30600063)
chr3 (20-167)||(17515310-17515457)
chr3 (20-167)||(23293167-23293314)
chr3 (52-167)||(46609149-46609264)
chr3 (48-167)||(53092623-53092742)
chr3 (20-165)||(43765139-43765284)
chr3 (50-162)||(2661880-2661992)
chr3 (48-167)||(28626411-28626530)
chr3 (78-173)||(35903819-35903914)
chr3 (48-167)||(7883328-7883447)
chr3 (48-167)||(23291570-23291689)
chr3 (23-154)||(35905712-35905843)
chr3 (48-167)||(46112487-46112606)
chr3 (20-164)||(42279510-42279654)
chr3 (48-167)||(611192-611311)
chr3 (48-166)||(2378953-2379071)
chr3 (23-164)||(2377032-2377173)
chr3 (48-172)||(44267976-44268100)
chr3 (51-157)||(23774162-23774268)
chr3 (48-167)||(30598337-30598456)
chr3 (106-167)||(7884927-7884988)
chr3 (48-164)||(42282443-42282559)
chr3 (51-167)||(51686367-51686483)
chr3 (51-168)||(48829355-48829472)
chr3 (23-89)||(7884873-7884939)
chr3 (47-157)||(23888776-23888886)
chr3 (47-157)||(40508915-40509025)
chr3 (47-157)||(48633887-48633997)
chr3 (50-164)||(54412519-54412633)
chr3 (20-121)||(46197766-46197867)
chr3 (61-157)||(2977347-2977443)
chr3 (47-111)||(25535253-25535317)
chr3 (48-167)||(21350575-21350694)
chr3 (47-109)||(23876982-23877044)
chr3 (47-157)||(45898352-45898462)
chr3 (48-157)||(17516943-17517052)
chr3 (20-113)||(48830803-48830896)
chr3 (87-167)||(600725-600805)
chr3 (20-92)||(44276193-44276265)
chr3 (48-167)||(46114075-46114195)
chr3 (47-117)||(33113184-33113254)
chr3 (77-157)||(41944586-41944666)
[»] chr2 (39 HSPs)
chr2 (20-167)||(6785978-6786125)
chr2 (20-167)||(37020508-37020655)
chr2 (42-167)||(24208061-24208186)
chr2 (20-173)||(39664745-39664898)
chr2 (31-167)||(16763076-16763212)
chr2 (48-172)||(24205593-24205717)
chr2 (48-167)||(14387349-14387468)
chr2 (20-167)||(40560223-40560370)
chr2 (20-167)||(14389081-14389228)
chr2 (48-167)||(16764581-16764700)
chr2 (22-167)||(44709744-44709889)
chr2 (48-167)||(37022155-37022274)
chr2 (48-173)||(2577450-2577575)
chr2 (23-167)||(19908246-19908391)
chr2 (20-172)||(2766929-2767081)
chr2 (20-164)||(17696209-17696353)
chr2 (48-167)||(40561848-40561967)
chr2 (78-167)||(6783364-6783453)
chr2 (20-163)||(42519202-42519346)
chr2 (48-168)||(39663153-39663273)
chr2 (48-167)||(16376736-16376855)
chr2 (55-167)||(19581414-19581526)
chr2 (48-164)||(19906685-19906801)
chr2 (61-168)||(6797506-6797613)
chr2 (20-167)||(39455169-39455316)
chr2 (98-168)||(34400313-34400383)
chr2 (23-118)||(16377197-16377292)
chr2 (48-173)||(39456750-39456875)
chr2 (31-130)||(11023001-11023100)
chr2 (126-167)||(42517558-42517599)
chr2 (61-153)||(37417287-37417379)
chr2 (106-164)||(6799436-6799494)
chr2 (47-157)||(11315339-11315449)
chr2 (47-121)||(26584821-26584895)
chr2 (60-111)||(4046352-4046403)
chr2 (47-118)||(29909664-29909735)
chr2 (51-157)||(361455-361561)
chr2 (47-164)||(37645490-37645607)
chr2 (61-117)||(15432378-15432434)
[»] scaffold1712 (1 HSPs)
scaffold1712 (48-167)||(982-1101)
[»] scaffold0081 (1 HSPs)
scaffold0081 (48-167)||(54228-54347)
[»] scaffold1454 (1 HSPs)
scaffold1454 (23-164)||(1266-1407)
[»] scaffold0345 (1 HSPs)
scaffold0345 (48-173)||(1525-1650)
[»] scaffold0564 (1 HSPs)
scaffold0564 (76-165)||(8264-8353)
[»] scaffold0002 (1 HSPs)
scaffold0002 (96-160)||(436272-436336)


Alignment Details
Target: chr7 (Bit Score: 128; Significance: 6e-66; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 20 - 167
Target Start/End: Complemental strand, 56477 - 56330
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    ||||||||||||||||| |||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  56477 acatcatcactactaacagacattttggacggagggagtgaattgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 56378  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  56377 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 56330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 20 - 167
Target Start/End: Complemental strand, 20478189 - 20478042
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||    
T  20478189 acatcatcactattaacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattcaggtacg 20478090  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    ||||| |||||||||||||||||||||||| | |||||||||||||||    
T  20478089 aaattggccgatttttcaaaattcaaggactattttgaggtattagtc 20478042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 20 - 167
Target Start/End: Original strand, 27666042 - 27666189
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||||| |||||| | |||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  27666042 acatcatcactattaacgggccttttggacggagggacggatttgatggacgtttgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 27666141  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  27666142 aaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 27666189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 23 - 173
Target Start/End: Original strand, 29996494 - 29996644
Alignment:
Q  23 tcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 122  Q
    ||||||||| |||||||| |||| || ||||||||  ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||    
T  29996494 tcatcactattaacggaccttttggatggagggacgaatttgatggacgtctgtaaaattcagggattaatttgatatttcgcaaaattcagggacaaaa 29996593  T
Q  123 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtccttttt 173  Q
    ||  ||||||||||||||||||||||||||||||||||||||||| |||||    
T  29996594 ttgaccgatttttcaaaattcaaggacgaatttgaggtattagtcgttttt 29996644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 35402088 - 35401969
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  35402088 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattagccgatttttcaaaattcaagg 35401989  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||| ||||||||    
T  35401988 acgaatttgagatattagtc 35401969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 35403589 - 35403708
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||    
T  35403589 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgattttttaaaattcaagg 35403688  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  35403689 acgaatttgaggtattagtc 35403708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 23 - 167
Target Start/End: Original strand, 39859209 - 39859353
Alignment:
Q  23 tcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 122  Q
    ||||||| |||||||||  |||| |||||||||||   ||||| |||||||||||||||||| ||||||| | ||||||||| ||||||||||||| ||     
T  39859209 tcatcaccactaacggagcttttggacggagggaccattttgacggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattcagggactaat 39859308  T
Q  123 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    || |||||||||| |||||||||||||||||||||||||||||||    
T  39859309 ttggccgattttttaaaattcaaggacgaatttgaggtattagtc 39859353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 20479689 - 20479808
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||| ||||||| ||| | |   ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  20479689 acggagggactaatttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaagg 20479788  T
Q  148 acgaatttgaggtattagtc 167  Q
    || | |||||||||||||||    
T  20479789 actattttgaggtattagtc 20479808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 20 - 167
Target Start/End: Original strand, 37115503 - 37115650
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||| |||||||||  |||| ||||||||||||  |||||||||||||||||||||||||| ||||| | ||||||| | |||||||||| |||    
T  37115503 acatcatcaccactaacggagcttttggacggagggactattttgatggacgtctgtaaaattcaggtactaaatagatattttgcaaaattcaggaacg 37115602  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    || ||  | ||||||| ||||||||| |||||||||||||||||||||    
T  37115603 aatttgactgattttttaaaattcaatgacgaatttgaggtattagtc 37115650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 23 - 168
Target Start/End: Complemental strand, 6602479 - 6602334
Alignment:
Q  23 tcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 122  Q
    ||||||| |||||||||  |||| |||||||||||   |||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||  |      
T  6602479 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggataagt 6602380  T
Q  123 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 168  Q
    || |||||||||| ||||||||||| |||||||||| |||||||||    
T  6602379 ttagccgattttttaaaattcaaggtcgaatttgagttattagtcc 6602334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 48 - 168
Target Start/End: Original strand, 77984 - 78104
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| | | | |   |||||||||||| |||||||||||| | ||||||||||||||||||| |||||||||||||||||||| |    
T  77984 acggagggactgatttgattggcattttgtaaattcagggacaaatttgatattttgcaaaattcagggacgaaattggccgatttttcaaaattcaaag 78083  T
Q  148 acgaatttgaggtattagtcc 168  Q
    |||||||||||||||||||||    
T  78084 acgaatttgaggtattagtcc 78104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 48 - 164
Target Start/End: Complemental strand, 27664549 - 27664433
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||||||||||||| | ||||||||||||| ||||| ||||||||||||||||||||||    
T  27664549 acggagggactgatttgattgacattttgtaaattcagggactaatttgatattttgcaaaattcagggacaaaattggccgatttttcaaaattcaagg 27664450  T
Q  148 acgaatttgaggtatta 164  Q
    || ||||||||||||||    
T  27664449 actaatttgaggtatta 27664433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 20 - 174
Target Start/End: Original strand, 24228386 - 24228540
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||| ||||| |||  |||| |||| ||||||   ||||||||||||||||||||||||| |||||| | ||||||||| ||||||||||||||    
T  24228386 acatcatcaccactaatggagcttttggacgaagggaccattttgatggacgtctgtaaaattcagagactaaatagatatttcgcaaaattcagggacg 24228485  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtccttttta 174  Q
    || || ||| |||||| |||||||||| ||||| ||||||||||| || ||||||    
T  24228486 aatttggccaattttttaaaattcaagaacgaaattgaggtattaatcattttta 24228540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 13169653 - 13169772
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||| | ||||||||| ||||||||||||| || || |||||||||| |||||||||||    
T  13169653 acggagggactgatttgattgacattttgtaaattcagggactaaatagatatttcgcaaaattcagggacaaatttggccgatttttgaaaattcaagg 13169752  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  13169753 acgaatttgaggtattagtc 13169772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 20 - 167
Target Start/End: Original strand, 38474120 - 38474267
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||| |||||||||  |||| |||||| ||||   |||||| | ||||||||||||||| ||||||| | ||||||||| ||||||||||||||    
T  38474120 acatcatcaccactaacggagcttttggacggatggaccattttgataggcgtctgtaaaattcaaggactaaatagatatttcgcaaaattcagggacg 38474219  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    || ||  ||||||||| ||||||| ||||| |||||||||||||||||    
T  38474220 aatttgaccgatttttaaaaattcgaggactaatttgaggtattagtc 38474267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 31 - 164
Target Start/End: Original strand, 34776903 - 34777036
Alignment:
Q  31 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 130  Q
    |||||||||  |||| |||||||||||   |||||||||||||||||||||||||||||||| | ||||||||| |||||||||| | ||| || ||| |    
T  34776903 actaacggagtttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaggaatgaatttggccaa 34777002  T
Q  131 tttttcaaaattcaaggacgaatttgaggtatta 164  Q
    ||||| |||||| ||| |||||||||||||||||    
T  34777003 ttttttaaaatttaagaacgaatttgaggtatta 34777036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 168
Target Start/End: Original strand, 30940402 - 30940550
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||| |||||||||  |||| ||||||| |||   ||||||| |||| ||||||||||||||||||| | ||||||||| |||||| || ||||    
T  30940402 acatcatcaccactaacggagcttttggacggagagaccattttgatgaacgtttgtaaaattcagggactaaatagatatttcgtaaaattaagagacg 30940501  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 168  Q
    || || |||||||||| |||||||||| || ||||| ||||||||||||    
T  30940502 aatttggccgattttttaaaattcaagaacaaatttaaggtattagtcc 30940550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 47384413 - 47384294
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   |||||| |||||||||| ||||||||| |||||||| ||||||| || ||  ||||||||||||||||||    
T  47384413 acggagggactgatttgattgacattttgtaaattcggggactaattagatatttcgcaaaattcaaggacgaatttggctcatttttcaaaattcaagg 47384314  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  47384313 acgaatttgaggtattagtc 47384294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 47 - 164
Target Start/End: Original strand, 37796185 - 37796302
Alignment:
Q  47 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 146  Q
    ||||||||||||  ||||||||||||| |||||||||||||||||| | ||||||||| ||||||   ||||||| || || ||||||| ||||||||||    
T  37796185 gacggagggactattttgatggacgtccgtaaaattcagggactaaatagatatttcgcaaaatttgaggacgaatttggctgatttttgaaaattcaag 37796284  T
Q  147 gacgaatttgaggtatta 164  Q
    ||| ||||||||||||||    
T  37796285 gacaaatttgaggtatta 37796302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 23 - 168
Target Start/End: Complemental strand, 45359480 - 45359335
Alignment:
Q  23 tcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 122  Q
    ||||||| |||||||||  |||| || ||||||||   |||||||||||||||||||||||| ||||||| | ||||||||| |||||||| ||||| |     
T  45359480 tcatcaccactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattcaaggacggat 45359381  T
Q  123 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 168  Q
    ||  ||||||||| |||||||| |||| ||||| ||||||||||||    
T  45359380 ttgaccgattttttaaaattcatggacaaatttaaggtattagtcc 45359335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 48 - 164
Target Start/End: Complemental strand, 39857764 - 39857648
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   |||||| |||||||| | ||||||||| |||||||||||||||| ||  ||||||||| |||||||||||    
T  39857764 acggagggactgatttgattgacattttgtaaattctgggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaagg 39857665  T
Q  148 acgaatttgaggtatta 164  Q
    |||||||||||||||||    
T  39857664 acgaatttgaggtatta 39857648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 20 - 167
Target Start/End: Original strand, 47386186 - 47386333
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||| |||||||||  |||| ||||||  |||   |||||||||||||||||||||| || |||||| |  |||||||| |||||||| |||||    
T  47386186 acatcatcaccactaacggagcttttggacggaatgaccattttgatggacgtctgtaaaatttagagactaaataaatatttcgcaaaattcaaggacg 47386285  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    || ||  | ||||||| |||||| ||||||||||||||||||||||||    
T  47386286 aatttgactgattttttaaaattaaaggacgaatttgaggtattagtc 47386333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 48 - 172
Target Start/End: Complemental strand, 37114060 - 37113936
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   ||||| ||||||||| | ||||||||| |||||||||||| ||| ||  || |||||| |||||||||||    
T  37114060 acggagggactgatttgattgacattttgtaaatttagggactaaatagatatttcgcaaaattcagggatgaatttgaccaattttttaaaattcaagg 37113961  T
Q  148 acgaatttgaggtattagtcctttt 172  Q
    |||||||||||||||||||| ||||    
T  37113960 acgaatttgaggtattagtcttttt 37113936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 107 - 166
Target Start/End: Complemental strand, 29994966 - 29994907
Alignment:
Q  107 aaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagt 166  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  29994966 aaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagt 29994907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 48 - 166
Target Start/End: Complemental strand, 24226700 - 24226582
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   ||||||| |||| || | | ||||||| |||||||| ||||||| || |||||||||| |||||||||||    
T  24226700 acggagggactgatttgattgacattttgtaaattcaaggacaaaatagctatttcgcaaaattcaaggacgaatttggccgatttttgaaaattcaagg 24226601  T
Q  148 acgaatttgaggtattagt 166  Q
    |||||||||||||||||||    
T  24226600 acgaatttgaggtattagt 24226582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 23 - 145
Target Start/End: Complemental strand, 13168267 - 13168142
Alignment:
Q  23 tcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattc---agggactaatttgatatttcgaaaaattcagggacg 119  Q
    ||||||| |||||||||  |||| |||||| ||||   |||||||||||||||||||||||   ||||||||| | ||||||||| |||||||| |||||    
T  13168267 tcatcaccactaacggagcttttggacggatggaccattttgatggacgtctgtaaaattcaggagggactaaatagatatttcgcaaaattcaaggacg 13168168  T
Q  120 aaatttgccgatttttcaaaattcaa 145  Q
    || || |||||||||| |||||||||    
T  13168167 aatttggccgattttttaaaattcaa 13168142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 50 - 168
Target Start/End: Complemental strand, 23904700 - 23904582
Alignment:
Q  50 ggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggac 149  Q
    ||||||||||||||||| ||| | |   ||||||| ||||||| | | ||||| | ||||||||| |||||| ||  ||||||||| |||||||||||||    
T  23904700 ggagggactgatttgattgacattttgtaaattcatggactaaatagctattttgcaaaattcagagacgaatttgaccgattttttaaaattcaaggac 23904601  T
Q  150 gaatttgaggtattagtcc 168  Q
    |||||||||||||||||||    
T  23904600 gaatttgaggtattagtcc 23904582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 52 - 168
Target Start/End: Complemental strand, 38549662 - 38549546
Alignment:
Q  52 agggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacga 151  Q
    ||||||||||||||||||| | |   ||||||  ||| ||| | ||||||||  |||||||||||||||| || || ||||||| |||||||||||||||    
T  38549662 agggactgatttgatggacattttgtaaattcgaggattaaatagatatttcacaaaattcagggacgaacttggctgatttttgaaaattcaaggacga 38549563  T
Q  152 atttgaggtattagtcc 168  Q
    |||| ||||||||||||    
T  38549562 atttaaggtattagtcc 38549546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 22155817 - 22155936
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   |||||||||||| || | | ||||| | |||||||| ||||||| || |||||||||| |||||||||||    
T  22155817 acggagggactgatttgattgacattttgtaaattcagggacaaaatagctattttgcaaaattcatggacgaatttggccgatttttgaaaattcaagg 22155916  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||| || |||||||||||    
T  22155917 acgaagtttaggtattagtc 22155936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 22211732 - 22211851
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   |||||||||||| || | | ||||| | |||||||| ||||||| || |||||||||| |||||||||||    
T  22211732 acggagggactgatttgattgacattttgtaaattcagggacaaaatagctattttgcaaaattcatggacgaatttggccgatttttgaaaattcaagg 22211831  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||| || |||||||||||    
T  22211832 acgaagtttaggtattagtc 22211851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 50 - 164
Target Start/End: Original strand, 48227913 - 48228027
Alignment:
Q  50 ggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggac 149  Q
    ||||||||||||||||| ||| | |   |||||||||||| || | ||||||||| ||||||||  |||||| ||  ||||||||| ||||||||| |||    
T  48227913 ggagggactgatttgattgacattttgtaaattcagggacaaaatagatatttcgcaaaattcaaagacgaatttgaccgattttttaaaattcaaagac 48228012  T
Q  150 gaatttgaggtatta 164  Q
    |||||||||||||||    
T  48228013 gaatttgaggtatta 48228027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 78 - 164
Target Start/End: Original strand, 6605397 - 6605483
Alignment:
Q  78 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttg-ccgatttttcaaaattcaaggacgaatttgaggtatta 164  Q
    ||||||||||||||| | | ||||||| |||||||||| || ||||||| ||||||||| ||||||||||||| ||||||||||||||    
T  6605397 aaattcagggactaaatagctatttcgcaaaattcaggaac-aaatttgaccgattttttaaaattcaaggacaaatttgaggtatta 6605483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 46437226 - 46437107
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||| | ||| | |   ||||||| |||| || | | ||||||| ||||||||  |||||| || || ||||||| |||||||||||    
T  46437226 acggagggactgatttggttgacattttgtaaattcaaggacaaaatagctatttcgcaaaattcaacgacgaatttggctgatttttgaaaattcaagg 46437127  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  46437126 acgaatttgaggtattagtc 46437107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 106 - 168
Target Start/End: Original strand, 23906295 - 23906357
Alignment:
Q  106 aaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 168  Q
    |||||| ||||||||| || |||||||||| |||||||||||| |||||||||||||||||||    
T  23906295 aaaatttagggacgaatttggccgattttttaaaattcaaggaggaatttgaggtattagtcc 23906357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 47 - 157
Target Start/End: Original strand, 33038801 - 33038911
Alignment:
Q  47 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 146  Q
    |||||||||||   ||||||||||||||| |||||||||||||||| ||||||||||| | |||| ||||| ||| ||  ||||    | ||||||||||    
T  33038801 gacggagggacctttttgatggacgtctgaaaaattcagggactaagttgatatttcgcataattgagggatgaatttgaccgacccataaaaattcaag 33038900  T
Q  147 gacgaatttga 157  Q
    |||||||||||    
T  33038901 gacgaatttga 33038911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 35693347 - 35693450
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatt--tgatatttcgaaaaattcaggga 117  Q
    |||||||||| |||||| ||  |||| || ||||||||   ||||||||||||||||||||||||||||||||||   |||||| || |||||||| |||    
T  35693347 acatcatcaccactaacagaacttttggatggagggaccattttgatggacgtctgtaaaattcagggactaattagagatattccgcaaaattcaagga 35693446  T
Q  118 cgaa 121  Q
    ||||    
T  35693447 cgaa 35693450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 47 - 118
Target Start/End: Complemental strand, 366818 - 366747
Alignment:
Q  47 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggac 118  Q
    ||||||||||   ||||||| ||||||||| |||||||||||||||||||||||||| ||||| | ||||||    
T  366818 gacggagggatgaatttgatagacgtctgttaaattcagggactaatttgatatttcaaaaaactgagggac 366747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 60 - 111
Target Start/End: Complemental strand, 7402000 - 7401949
Alignment:
Q  60 atttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaatt 111  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||| |||||    
T  7402000 atttgatggacgtctgttaaattcagggacgaatttgatatttcgataaatt 7401949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 52 - 163
Target Start/End: Complemental strand, 35691542 - 35691431
Alignment:
Q  52 agggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacga 151  Q
    ||||||||||||||| ||| | |   ||||||| |||| || | | ||||||| |||||| || |||||| ||  ||||||||| |||||||||||||||    
T  35691542 agggactgatttgattgacattttgtaaattcaaggacaaaatagctatttcgcaaaatttagagacgaatttgaccgatttttgaaaattcaaggacga 35691443  T
Q  152 atttgaggtatt 163  Q
    ||||||||||||    
T  35691442 atttgaggtatt 35691431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 31 - 130
Target Start/End: Complemental strand, 45463806 - 45463707
Alignment:
Q  31 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 130  Q
    |||||||||| |||| |||||||||||  | ||||||||||||    |||||||||||||| ||||||||||||  ||||| ||||||||| || |||||    
T  45463806 actaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggccga 45463707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 47 - 157
Target Start/End: Original strand, 46996706 - 46996816
Alignment:
Q  47 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 146  Q
    |||||||||||   |||||||||||||||  |||||||| |||||| ||||||||||| | |||| ||||||||| || |||||    | |||||||| |    
T  46996706 gacggagggacctttttgatggacgtctgacaaattcagtgactaagttgatatttcgcataattgagggacgaagttggccgacgcgtgaaaattcagg 46996805  T
Q  147 gacgaatttga 157  Q
    |||||||||||    
T  46996806 gacgaatttga 46996816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 158
Target Start/End: Original strand, 13039618 - 13039722
Alignment:
Q  54 ggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaat 153  Q
    ||||||||||||| ||| | |  |||||||||||||||| | | ||||||| |||||| ||||||||| ||    ||||||| ||||||||||||||||     
T  13039618 ggactgatttgattgacattttgaaaattcagggactaaatagttatttcgcaaaatttagggacgaatttgattgatttttgaaaattcaaggacgaac 13039717  T
Q  154 ttgag 158  Q
    |||||    
T  13039718 ttgag 13039722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 34775117 - 34774998
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||  | |   ||||||||||||||| | | ||||| | |||||||| | | ||| ||  ||||||||| ||||||||| |    
T  34775117 acggagggactgatttgattgatattttgtaaattcagggactaaatagctattttgcaaaattcatgaatgaatttgaccgattttttaaaattcaaag 34775018  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||| ||||||||    
T  34775017 acgaatttgagatattagtc 34774998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 45361246 - 45361365
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   || |||| ||||||| |   ||||| | |||||||||| || |||||  || |||||| |||||||||||    
T  45361246 acggagggactgatttgattgacattttgtaagttcaaggactaaataactattttgcaaaattcaggaacaaaattgacccattttttaaaattcaagg 45361345  T
Q  148 acgaatttgaggtattagtc 167  Q
    | ||||||||||||||||||    
T  45361346 aagaatttgaggtattagtc 45361365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 157
Target Start/End: Complemental strand, 27955490 - 27955380
Alignment:
Q  47 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 146  Q
    |||||||||||   |||||||||||||||  ||||||||  | ||| ||||||||||| |||||| ||||| ||| || || |||   | ||||||||||    
T  27955490 gacggagggacctctttgatggacgtctgacaaattcagaaattaagttgatatttcgtaaaattgagggatgaatttagctgatccgtaaaaattcaag 27955391  T
Q  147 gacgaatttga 157  Q
    |||||||||||    
T  27955390 gacgaatttga 27955380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 157
Target Start/End: Original strand, 38613503 - 38613595
Alignment:
Q  65 atggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttga 157  Q
    |||||||||||  ||||||||||||||| ||||||||||| | |||| ||||| ||| || |||||    | |||||| ||||||||||||||    
T  38613503 atggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttggccgacccgtgaaaattgaaggacgaatttga 38613595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 157
Target Start/End: Original strand, 47341712 - 47341800
Alignment:
Q  69 acgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttga 157  Q
    |||||||  ||||||||||||||| ||||||||||| | |||| ||||| ||| || |||||    | |||||||||||||||||||||    
T  47341712 acgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttggccgacccgtgaaaattcaaggacgaatttga 47341800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 167
Target Start/End: Original strand, 35693434 - 35693465
Alignment:
Q  136 caaaattcaaggacgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||||||||||||||    
T  35693434 caaaattcaaggacgaatttgaggtattagtc 35693465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 47 - 117
Target Start/End: Complemental strand, 2167599 - 2167529
Alignment:
Q  47 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcaggga 117  Q
    |||||||||||   |||||||| ||||||  ||||||||||||||| ||||||||||| | |||| |||||    
T  2167599 gacggagggacctttttgatgggcgtctgacaaattcagggactaagttgatatttcgcataattgaggga 2167529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 47 - 157
Target Start/End: Complemental strand, 23953925 - 23953815
Alignment:
Q  47 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 146  Q
    |||||||||||   |||||| ||||||||  ||||||| ||||||| ||||||||||| | |||| | ||||||| ||| ||||    | |||||| |||    
T  23953925 gacggagggacctttttgattgacgtctgacaaattcacggactaagttgatatttcgcataattgatggacgaattttaccgacccgtaaaaatttaag 23953826  T
Q  147 gacgaatttga 157  Q
    |||||||||||    
T  23953825 gacgaatttga 23953815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 4322560 - 4322633
Alignment:
Q  31 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcg 104  Q
    |||||||||| |||| |||||||||||  | |||||||| |||    |||||||||||||| ||||||||||||    
T  4322560 actaacggaccttttggacggagggacgaaattgatggatgtcaaacaaattcagggactattttgatatttcg 4322633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 120
Target Start/End: Complemental strand, 11682901 - 11682828
Alignment:
Q  47 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacga 120  Q
    |||||||||||| | |||||||||||||    |||||| ||||||||||||||||| | | |||| ||||||||    
T  11682901 gacggagggactaaattgatggacgtctaacgaattcaaggactaatttgatattttgcataattgagggacga 11682828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 164
Target Start/End: Complemental strand, 13018085 - 13018036
Alignment:
Q  115 ggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 164  Q
    ||||||| || || ||||||| |||||||||||| |||||||||||||||    
T  13018085 ggacgaatttggctgattttttaaaattcaaggatgaatttgaggtatta 13018036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 121
Target Start/End: Original strand, 35344295 - 35344368
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 121  Q
    ||||||||||   ||||||||||||||   ||||||||||| ||| ||||||||||| | |||| |||||||||    
T  35344295 acggagggacctttttgatggacgtcttataaattcagggattaaattgatatttcgcataattgagggacgaa 35344368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 46812600 - 46812696
Alignment:
Q  61 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttga 157  Q
    |||||||||||||||  ||||| ||||||||| ||||||||||    |||| ||||| ||| || ||||| |  | |||||||||||||||| ||||    
T  46812600 tttgatggacgtctgacaaatttagggactaaattgatatttcacgtaattgagggatgaatttggccgactcgtaaaaattcaaggacgaagttga 46812696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 124; Significance: 1e-63; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 20 - 171
Target Start/End: Complemental strand, 27691301 - 27691150
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||||| | |||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  27691301 acatcatcactattgacggaccttttggacggagggacggatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 27691202  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtccttt 171  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  27691201 aaattggccgatttttcaaaattcaaggacgaatttgaggtattagtccttt 27691150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 20 - 170
Target Start/End: Original strand, 27406894 - 27407044
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||||  ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||| |||||    
T  27406894 acatcatcactgttaacggacattttggacggagagactgatttgatggacgtctgtaaaattcagggactattttaatatttcgaataattcatggacg 27406993  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcctt 170  Q
    ||||| ||| |||||||||||||||||||| | ||||||||||||||||||    
T  27406994 aaattggccaatttttcaaaattcaaggactattttgaggtattagtcctt 27407044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 20 - 174
Target Start/End: Original strand, 33708801 - 33708954
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||||| |||||||| |||| ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||    
T  33708801 acatcatcactattaacggaccttttggacggagggacagatttgatggacgtttgtaaaattcagggactaatttaatatttcgcaaaattcagggacg 33708900  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtccttttta 174  Q
    |||||  ||| ||||| |||||||||||| |||||||||||||||||||| ||||    
T  33708901 aaattgaccg-ttttttaaaattcaaggatgaatttgaggtattagtcctattta 33708954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 20 - 167
Target Start/End: Complemental strand, 13282625 - 13282478
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||| |||||||||  |||| |||||||||||   |||||||||||| ||||||||||||||||||| | ||||||||| ||||||||||||||    
T  13282625 acatcatcaccactaacggagcttttggacggagggaccattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcagggacg 13282526  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    || || |||||||||| |||||||||||||||||||||||||||||||    
T  13282525 aatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 13282478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 20 - 149
Target Start/End: Complemental strand, 15305944 - 15305815
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||||  ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||     
T  15305944 acatcatcactgttaacggatattttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcaaataattcagggaca 15305845  T
Q  120 aaatttgccgatttttcaaaattcaaggac 149  Q
    |||||  || ||||||||||||||||||||    
T  15305844 aaattgaccaatttttcaaaattcaaggac 15305815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 20 - 149
Target Start/End: Complemental strand, 15486313 - 15486184
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||||  ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||     
T  15486313 acatcatcactgttaacggatattttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcaaataattcagggaca 15486214  T
Q  120 aaatttgccgatttttcaaaattcaaggac 149  Q
    |||||  || ||||||||||||||||||||    
T  15486213 aaattgaccaatttttcaaaattcaaggac 15486184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 23 - 167
Target Start/End: Original strand, 8609787 - 8609931
Alignment:
Q  23 tcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 122  Q
    ||||||| |||||||||  |||| |||||||||||   |||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||     
T  8609787 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaat 8609886  T
Q  123 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    || |||||||||| |||||||||| ||||||||||||||||||||    
T  8609887 ttggccgattttttaaaattcaagaacgaatttgaggtattagtc 8609931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 23 - 167
Target Start/End: Original strand, 13108336 - 13108480
Alignment:
Q  23 tcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 122  Q
    ||||||| ||||||| |  |||| |||||||||||   |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |     
T  13108336 tcatcaccactaacgaagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgtat 13108435  T
Q  123 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    || |||||||||| |||||||||||||||||||||| ||||||||    
T  13108436 ttagccgattttttaaaattcaaggacgaatttgagttattagtc 13108480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 601674 - 601793
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||| ||||||| ||| | |   ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  601674 acggagggactaatttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaagg 601773  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  601774 acgaatttgaggtattagtc 601793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 48 - 172
Target Start/End: Original strand, 33762683 - 33762807
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||| ||||||||| ||| | |   ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  33762683 acggagggattgatttgattgacattttgtaaattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaagg 33762782  T
Q  148 acgaatttgaggtattagtcctttt 172  Q
    |||||||||||||||||||| ||||    
T  33762783 acgaatttgaggtattagtcatttt 33762807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 23 - 167
Target Start/End: Complemental strand, 38547372 - 38547228
Alignment:
Q  23 tcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 122  Q
    ||||||| |||||||||  |||| || ||||||||   |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |     
T  38547372 tcatcaccactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcatggacgtat 38547273  T
Q  123 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    || |||||||||| |||||||||||||||| ||||||||||||||    
T  38547272 ttggccgattttttaaaattcaaggacgaacttgaggtattagtc 38547228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 78 - 167
Target Start/End: Complemental strand, 29237240 - 29237151
Alignment:
Q  78 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  29237240 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 29237151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 78 - 167
Target Start/End: Original strand, 29239187 - 29239276
Alignment:
Q  78 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  29239187 aaattcagggactaatttgatatttcgaaaaatttagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 29239276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 48 - 175
Target Start/End: Complemental strand, 8608357 - 8608229
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaatt-cagggacgaaatttgccgatttttcaaaattcaag 146  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||||||||||||||| |||||| |||||||||||||  ||||||||||||||||||||    
T  8608357 acggagggactgatttgattgacattttataaattcagggactaatttgatatttcgcaaaatttcagggacgaaattgaccgatttttcaaaattcaag 8608258  T
Q  147 gacgaatttgaggtattagtcctttttat 175  Q
    ||||||||| |||||||||||||||||||    
T  8608257 gacgaatttaaggtattagtcctttttat 8608229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 42941921 - 42941777
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||| | ||||||||| ||||| ||||||||||||  |||||||||| ||||||||||||||||||||| |  |||||||  ||||||||||||||    
T  42941921 acatcatctccactaacggagattttggacggagggactattttgatggacatctgtaaaattcagggactaaataaatatttctcaaaattcagggacg 42941822  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 164  Q
    || || || ||||||| ||||||||||||||||||||||||||||    
T  42941821 aatttggctgattttttaaaattcaaggacgaatttgaggtatta 42941777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 27692807 - 27692926
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    |||||||||||||||| || ||| | |   ||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||    
T  27692807 acggagggactgatttaattgacattttgtaaattcagggactaatttgatattttgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 27692906  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  27692907 acgaatttgaggtattagtc 27692926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 33761188 - 33761069
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||| |    
T  33761188 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggctgatttttcaaaattcaaag 33761089  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  33761088 acgaatttgaggtattagtc 33761069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 38548801 - 38548920
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||  | |   ||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  38548801 acggagggactgatttgattgaaattttgtaaattcagggattaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 38548900  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  38548901 acgaatttgaggtattagtc 38548920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 48 - 166
Target Start/End: Complemental strand, 33707325 - 33707207
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    |||||| |||||||||||| ||| | |   ||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||    
T  33707325 acggagtgactgatttgattgacattttataaattcagggactaatttgatatttcgtaaaattcagggacgaaattgaccgatttttcaaaattcaagg 33707226  T
Q  148 acgaatttgaggtattagt 166  Q
    |||||||||||||||||||    
T  33707225 acgaatttgaggtattagt 33707207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 35509333 - 35509214
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||| ||||||||||||| ||| | |   ||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||    
T  35509333 acggatggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaagg 35509234  T
Q  148 acgaatttgaggtattagtc 167  Q
    || |||||||||||||||||    
T  35509233 actaatttgaggtattagtc 35509214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 35510789 - 35510908
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||||||||||||||  |||||||| ||||||||||  |||||||||||||||||||||    
T  35510789 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcacaaaattcaaggacgaaattgaccgatttttcaaaattcaagg 35510888  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  35510889 acgaatttgaggtattagtc 35510908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 78 - 167
Target Start/End: Complemental strand, 13106893 - 13106804
Alignment:
Q  78 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||    
T  13106893 aaattcagggactaatttgatatttcgcaaaattcagggatgaaattggccgatttttcaaaattcaaggacgaatttaaggtattagtc 13106804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 78 - 167
Target Start/End: Original strand, 15308261 - 15308350
Alignment:
Q  78 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||    
T  15308261 aaattcagggactaatttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 15308350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 78 - 167
Target Start/End: Original strand, 15488630 - 15488719
Alignment:
Q  78 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||    
T  15488630 aaattcagggactaatttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 15488719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 48 - 164
Target Start/End: Original strand, 13283965 - 13284081
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   ||||||| ||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||    
T  13283965 acggagggactgatttgattgacattttgtaaattcatggactaatttgatatttcgcaaaattcagggacaaaattggccgatttttcaaaattcaagg 13284064  T
Q  148 acgaatttgaggtatta 164  Q
    ||||||||| |||||||    
T  13284065 acgaatttgtggtatta 13284081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 41825641 - 41825785
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    ||||||||||||||||| ||  |||| ||||||| |||   |||||||||||||||||||||||||||||||| | ||||||||| |||||||| |||||    
T  41825641 acatcatcactactaacagagcttttggacggagtgaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacg 41825740  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 164  Q
    || ||    ||||||| ||||||||||||||||||||||||||||    
T  41825741 aatttatttgatttttgaaaattcaaggacgaatttgaggtatta 41825785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 20 - 167
Target Start/End: Original strand, 41042581 - 41042728
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||| |||||||||  |||| |||||||||||   ||||||||||| |||||||||||||||||||| | ||||||||  |||||||||||||     
T  41042581 acatcatcaccactaacggagcttttggacggagggaccattttgatggacgcctgtaaaattcagggactaaatagatatttcacaaaattcagggaca 41042680  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    || || ||| |||||| |||||||||||||| |||| |||||||||||    
T  41042681 aatttggccaattttttaaaattcaaggacggatttaaggtattagtc 41042728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 42943396 - 42943515
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||| | ||||||||| |||||||||||||||| || |||||||||| |||||||||||    
T  42943396 acggagggactgatttgattgacattttgtaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaagg 42943495  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  42943496 acgaatttgaggtattagtc 42943515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 20 - 169
Target Start/End: Complemental strand, 22272483 - 22272332
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||| |||||||||  |||| || |||||||||  |||||||||||| ||||||||||||||||||| | |||||| || ||||||||||||||    
T  22272483 acatcatcaccactaacggagcttttggatggagggactattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcagggacg 22272384  T
Q  120 aaatttgccga--tttttcaaaattcaaggacgaatttgaggtattagtcct 169  Q
    || ||  | ||  ||||| ||||||||| |||||||||||||||||||||||    
T  22272383 aatttgactgattttttttaaaattcaaagacgaatttgaggtattagtcct 22272332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 26242311 - 26242455
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||| | |||||||||  |||| |||||||||||   ||||||||||||||||||||||||| |||||| | ||||||||| |||||| |||||||    
T  26242311 acatcatcgccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagagactaaatagatatttcgcaaaatttagggacg 26242410  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 164  Q
    || || || ||||||| |||||||||| ||||| |||||||||||    
T  26242411 aatttggctgatttttgaaaattcaagaacgaaattgaggtatta 26242455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 20 - 167
Target Start/End: Original strand, 13486096 - 13486243
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||||||||| |||  |||| ||| |||||||   |||||||||||||||||||||||||||||||| | ||||||||| ||||| ||| ||||    
T  13486096 acatcatcactactaatggagcttttggacagagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaatccagagacg 13486195  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    ||  |  ||||||||| |||||||||| || |||||||||||||||||    
T  13486196 aatctgaccgatttttaaaaattcaagcacaaatttgaggtattagtc 13486243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 20 - 167
Target Start/End: Original strand, 7745109 - 7745256
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||| |||||||||  |||| || ||||||||   ||||||||| ||||||||||| |||||||||| |  |||||||| ||||||||| ||||    
T  7745109 acatcatcaccactaacggagcttttggatggagggaccattttgatggatgtctgtaaaatacagggactaaataaatatttcgcaaaattcagagacg 7745208  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    || || || ||||||| ||||||||| |||||||||||| ||||||||    
T  7745209 aatttggctgatttttgaaaattcaaagacgaatttgagatattagtc 7745256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 26238845 - 26238726
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||||||| | |   ||||||  ||||||| | ||||||||| |||||||||||||||| || || ||||||| |||||||||||    
T  26238845 acggagggactgatttgatggacattttgtaaattcgaggactaaatagatatttcgcaaaattcagggacgaatttggctgatttttgaaaattcaagg 26238746  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  26238745 acgaatttgaggtattagtc 26238726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 78 - 164
Target Start/End: Complemental strand, 27404299 - 27404213
Alignment:
Q  78 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 164  Q
    ||||| |||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||    
T  27404299 aaatttagggactattttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtatta 27404213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 168 - 229
Target Start/End: Complemental strand, 18645813 - 18645752
Alignment:
Q  168 ctttttataatagcaaatgtgctttaaactcctttagtatcgcttagatcatcaaccgaact 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18645813 ctttttataatagcaaatgtgctttaaactcctttagtatcgcttagatcatcaaccgaact 18645752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 86 - 168
Target Start/End: Original strand, 34681074 - 34681156
Alignment:
Q  86 ggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 168  Q
    ||||||| | ||||||||| |||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||||    
T  34681074 ggactaaatagatatttcgcaaaattcagggacgaatttggccgatttttgaaaattcaaggacgaatttgaggtattagtcc 34681156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 61 - 166
Target Start/End: Complemental strand, 5036551 - 5036446
Alignment:
Q  61 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggt 160  Q
    |||||| ||||||||||||||||| ||||||| | ||||||||  |||||||||||||||| ||  | ||||||| |||||| |||||||||||||||||    
T  5036551 tttgatagacgtctgtaaaattcaaggactaaatagatatttcacaaaattcagggacgaatttgacggattttttaaaatttaaggacgaatttgaggt 5036452  T
Q  161 attagt 166  Q
    ||||||    
T  5036451 attagt 5036446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 22273861 - 22273980
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||| | ||||||| | ||||||||| ||| || || |||||||||| |||||||||||    
T  22273861 acggagggactgatttgattgacattttgtaaattcagggactaaatagatattttgcaaaattcagagacaaatttggccgattttttaaaattcaagg 22273960  T
Q  148 acgaatttgaggtattagtc 167  Q
    || |||||||||||||||||    
T  22273961 acaaatttgaggtattagtc 22273980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 41824009 - 41823890
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    |||||||||||||||||||| || | |   ||||||  ||||||| | ||||||||| |||||||| |||||||||| || ||||||| |||||||||||    
T  41824009 acggagggactgatttgatgaacattttgtaaattcgaggactaaatagatatttcgcaaaattcaaggacgaaattagctgatttttgaaaattcaagg 41823910  T
Q  148 acgaatttgaggtattagtc 167  Q
    |||||||| |||||||||||    
T  41823909 acgaatttaaggtattagtc 41823890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 154
Target Start/End: Original strand, 9673162 - 9673296
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||| ||||||| |  ||||||||||||||||   |||||||||||||||||||||||||||| ||| | ||||||||  ||||||||||||||    
T  9673162 acatcatcaccactaacgaagcttttagacggagggaccattttgatggacgtctgtaaaattcagggattaaatagatatttcacaaaattcagggacg 9673261  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatt 154  Q
    || || ||  |||  | || |||||||||||||||    
T  9673262 aatttagctaattgatgaagattcaaggacgaatt 9673296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 108 - 168
Target Start/End: Complemental strand, 600819 - 600759
Alignment:
Q  108 aattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 168  Q
    |||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  600819 aattcaaggacgaaattggctgatttttcaaaattcaaggacgaatttgaggtattagtcc 600759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 5038032 - 5038150
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||| | | ||||||| |||||||| | ||||| ||  ||||||||| ||||||||| |    
T  5038032 acggagggactgatttgattgacattttgtaaattcagggactaaatagctatttcgcaaaattcaagaacgaatttgaccgattttttaaaattcaa-g 5038130  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  5038131 acgaatttgaggtattagtc 5038150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 99 - 167
Target Start/End: Complemental strand, 13484613 - 13484545
Alignment:
Q  99 atttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    |||||| |||||||||||||||| || |||||||||| ||||||||| ||||||||||||| |||||||    
T  13484613 atttcgcaaaattcagggacgaatttggccgatttttgaaaattcaatgacgaatttgaggcattagtc 13484545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 43262107 - 43262226
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    |||||| |||||||||||| ||| | |   ||||||  ||||||| | ||||||||| |||||| |||| |||| || || ||||||| |||||| ||||    
T  43262107 acggagagactgatttgattgacattttgtaaattcgaggactaaatagatatttcgcaaaatttagggtcgaatttagctgatttttgaaaatttaagg 43262206  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  43262207 acgaatttgaggtattagtc 43262226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 31 - 157
Target Start/End: Original strand, 28433704 - 28433830
Alignment:
Q  31 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 130  Q
    ||||||| || |||| |||||||||||  | | ||||||||||    |||||||||||||| ||||||||||||  ||||| ||||||||| || |||||    
T  28433704 actaacgaaccttttggacggagggacgaaatcgatggacgtcaaacaaattcagggactattttgatatttcgttaaattgagggacgaatttggccga 28433803  T
Q  131 tttttcaaaattcaaggacgaatttga 157  Q
    |  || |||||||| ||||||| ||||    
T  28433804 tccttgaaaattcagggacgaaattga 28433830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 47 - 157
Target Start/End: Complemental strand, 31821538 - 31821428
Alignment:
Q  47 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 146  Q
    |||||||||||   |||||||||||||||  |||||| |||||||| ||||||||||| | |||| ||||||||| ||  ||||  | | |||||||| |    
T  31821538 gacggagggacctttttgatggacgtctgataaattctgggactaagttgatatttcgcataattgagggacgaagttgaccgacgtgtgaaaattcagg 31821439  T
Q  147 gacgaatttga 157  Q
    |||||||||||    
T  31821438 gacgaatttga 31821428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 40339677 - 40339760
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttc 103  Q
    ||||||||||||||||||||  |||| || | ||||||   |||||||||| ||||||||||||| ||||||| | ||||||||    
T  40339677 acatcatcactactaacggagcttttggatgaagggaccattttgatggacatctgtaaaattcatggactaaatagatatttc 40339760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 41040839 - 41040720
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    |||||||||| |||||||| ||| | |   ||||||| |||| || | | ||||| | |||||||||  ||||| || |||||||||| ||||||||| |    
T  41040839 acggagggaccgatttgattgacattttgtaaattcaaggacaaaatagctattttggaaaattcagaaacgaatttagccgatttttaaaaattcaaag 41040740  T
Q  148 acgaatttgaggtattagtc 167  Q
    || |||||||||||||||||    
T  41040739 acaaatttgaggtattagtc 41040720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 121
Target Start/End: Complemental strand, 11788441 - 11788367
Alignment:
Q  47 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 121  Q
    ||||||||||   ||||||||||||||||| ||||||  |||| ||||||||||||||| |||||  ||||||||    
T  11788441 gacggagggatgaatttgatggacgtctgttaaattcgaggacaaatttgatatttcgataaattaggggacgaa 11788367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 40020623 - 40020713
Alignment:
Q  31 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 121  Q
    |||||||||| |||| |||||||||||  | ||||||||||||    |||||||||||||| ||||||||||||  |||||  ||||||||    
T  40020623 actaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaa 40020713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 157
Target Start/End: Original strand, 42897778 - 42897888
Alignment:
Q  47 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 146  Q
    |||||||||||   |||||||||||||||  ||||||| ||||||| ||||||||||  | |||| ||||||||| || |||||    | ||||||||||    
T  42897778 gacggagggacctttttgatggacgtctgacaaattcaaggactaagttgatatttcacataattgagggacgaatttggccgacccgtaaaaattcaag 42897877  T
Q  147 gacgaatttga 157  Q
    |||| ||||||    
T  42897878 gacggatttga 42897888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 37526027 - 37526084
Alignment:
Q  47 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcg 104  Q
    |||||||||||   ||||||||| ||||| |||||||||||||||| |||||||||||    
T  37526027 gacggagggacctttttgatggatgtctgaaaaattcagggactaagttgatatttcg 37526084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 462388 - 462484
Alignment:
Q  61 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttga 157  Q
    |||||||||||| ||  ||||||| ||||||| ||||||||||| | |||| | ||| ||| || |||||| | | ||||||||| |||||||||||    
T  462388 tttgatggacgtttgacaaattcaaggactaagttgatatttcgcataattgacggatgaatttggccgatctgtaaaaattcaatgacgaatttga 462484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 32822467 - 32822371
Alignment:
Q  61 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttga 157  Q
    |||||||||| ||||  ||||||||||||||| |||||||||  || |||| ||||| ||| || ||||||   | |||||||||||||||| ||||    
T  32822467 tttgatggacatctgacaaattcagggactaagttgatattttaaataattgagggatgaatttggccgatccataaaaattcaaggacgaagttga 32822371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 33160166 - 33160262
Alignment:
Q  61 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttga 157  Q
    |||||||| ||||||  |||||||| |||||| ||||||||||  | |||| ||||| ||| || |||||  | | |||||||||||||||||||||    
T  33160166 tttgatgggcgtctgacaaattcagagactaagttgatatttcacataattgagggatgaatttggccgacctgtgaaaattcaaggacgaatttga 33160262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 131
Target Start/End: Original strand, 33750388 - 33750472
Alignment:
Q  47 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgat 131  Q
    |||||||||||   ||||||| | |||||  ||||||||||||||| ||||||||||| | |||| ||||||||| || ||||||    
T  33750388 gacggagggacctttttgatgaatgtctgacaaattcagggactaagttgatatttcgcataattgagggacgaagttggccgat 33750472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 130
Target Start/End: Original strand, 31201148 - 31201230
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 130  Q
    ||||||||||   |||||||||||||||  ||||||||||| ||| ||||||||||| | |||| | ||||||| || |||||    
T  31201148 acggagggacctttttgatggacgtctgataaattcagggattaaattgatatttcgcataattgatggacgaatttggccga 31201230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 9184503 - 9184446
Alignment:
Q  47 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcg 104  Q
    |||||||||||   || ||| ||||||||  |||||||||||||||||||||||||||    
T  9184503 gacggagggaccatttcgatcgacgtctgacaaattcagggactaatttgatatttcg 9184446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 120; Significance: 3e-61; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 20 - 167
Target Start/End: Original strand, 29621758 - 29621905
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  29621758 acatcatcactattaacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattcagggacg 29621857  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    ||||| |||||||||||||||||||| ||| | |||||||||||||||    
T  29621858 aaattggccgatttttcaaaattcaatgactattttgaggtattagtc 29621905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 20 - 171
Target Start/End: Original strand, 42473584 - 42473735
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||||  ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  42473584 acatcatcactgttaacggacattttggacggaaggactgatttgatggacgtctgtaaaattcagggactattttgatatttcgaataattcagggacg 42473683  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtccttt 171  Q
    ||||| |||||||||||||||||||||||| | |||||||||||||||||||    
T  42473684 aaattggccgatttttcaaaattcaaggactattttgaggtattagtccttt 42473735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 40780697 - 40780553
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||||  ||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  40780697 acatcatcactgttaacggacattttggacggagggactgatttgatggacgtttgcaaaattcagggactaatttgatatttcgaaaaattcagggacg 40780598  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 164  Q
    |||||  ||||||||||||||||||||||| | ||||||||||||    
T  40780597 aaattgtccgatttttcaaaattcaaggactattttgaggtatta 40780553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 20 - 167
Target Start/End: Original strand, 2854304 - 2854450
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||||| ||| |||| |||| |||||||||||  ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  2854304 acatcatcactattaatggaccttttggacggagggacgaatttgttggacgtctgtaaaattcagggactaatttgat-tttcgaaaaattcagggacg 2854402  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    |||||  |||||||||||||||||||||||||||||||||||||||||    
T  2854403 aaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 2854450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 20 - 167
Target Start/End: Original strand, 24541188 - 24541336
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactga-tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggac 118  Q
    |||||||||||| |||  ||| |||| ||||||||   ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  24541188 acatcatcactattaatagaccttttggacggaggagatgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggac 24541287  T
Q  119 gaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||    
T  24541288 gaaattggccgatttttcaaaattcaatgacgaatttgaggtattagtc 24541336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 23 - 167
Target Start/End: Complemental strand, 17574462 - 17574318
Alignment:
Q  23 tcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 122  Q
    ||||||| |||||||||  |||| |||||||||||   |||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||     
T  17574462 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaat 17574363  T
Q  123 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    || |||||||||| |||||||||||||||||||||||||||||||    
T  17574362 ttggccgattttttaaaattcaaggacgaatttgaggtattagtc 17574318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 20 - 168
Target Start/End: Original strand, 36057590 - 36057738
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||| | |||||||  |||| |||||||||||   ||||||||||||||||||||||||||| |||| | ||||||||| ||||||||||||||    
T  36057590 acatcatcaccattaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggtctaaatagatatttcgcaaaattcagggacg 36057689  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 168  Q
    || || |||||||||| ||||||||||||||||||||||||||||||||    
T  36057690 aatttggccgatttttgaaaattcaaggacgaatttgaggtattagtcc 36057738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 23 - 169
Target Start/End: Complemental strand, 7267987 - 7267841
Alignment:
Q  23 tcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 122  Q
    ||||||| |||||||||  |||| ||||||||||    |||||||||||||||||||||||||||||||| | ||||||||| ||||||||| ||||||     
T  7267987 tcatcaccactaacggagcttttggacggagggatcattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagtgacgaat 7267888  T
Q  123 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtcct 169  Q
    || | |||||||| |||||||||||||||||||||||||||||||||    
T  7267887 ttggacgattttttaaaattcaaggacgaatttgaggtattagtcct 7267841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 40782181 - 40782300
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||| ||||||| ||| | |   ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  40782181 acggagggactaatttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaagg 40782280  T
Q  148 acgaatttgaggtattagtc 167  Q
    || | |||||||||||||||    
T  40782281 actattttgaggtattagtc 40782300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 2853005 - 2852886
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   ||||||||| ||||||||||||||||| |||||||||||||||||||  ||||||||| |||||||||||    
T  2853005 acggagggactgatttgattgacattttgtaaattcaggaactaatttgatatttcgcaaaattcagggacgaaattgaccgattttttaaaattcaagg 2852906  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  2852905 acgaatttgaggtattagtc 2852886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 78 - 173
Target Start/End: Original strand, 7269446 - 7269541
Alignment:
Q  78 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtccttttt 173  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||| |||||    
T  7269446 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattagccgattttttaaaattcaaagacgaatttgaggtattagtcattttt 7269541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 21842962 - 21843081
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||||||||||||||| |||||||| |||| |||||  |||||||||||||||||||||    
T  21842962 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcatggacaaaattgaccgatttttcaaaattcaagg 21843061  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  21843062 acgaatttgaggtattagtc 21843081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 29620257 - 29620138
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||| ||||||| ||| | |   |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  29620257 acggagggactaatttgattgacattttgtaaattcagagactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaagg 29620158  T
Q  148 acgaatttgaggtattagtc 167  Q
    || | |||||||||||||||    
T  29620157 actattttgaggtattagtc 29620138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 20 - 167
Target Start/End: Complemental strand, 34327782 - 34327635
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||| |||||| ||  |||| ||||||| |||   |||||||||||||||||||||||||||||||| | ||||||||| ||||||||| ||||    
T  34327782 acatcatcaccactaacagagcttttggacggagagaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagcgacg 34327683  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    || || ||| |||||  |||||||||||||||||||||||||||||||    
T  34327682 aatttggccaattttagaaaattcaaggacgaatttgaggtattagtc 34327635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 23 - 167
Target Start/End: Complemental strand, 2179931 - 2179787
Alignment:
Q  23 tcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 122  Q
    ||||||| ||||| |||  |||| |||||||||||   ||||||||| |||||||||||||||||| ||| | ||||||||  ||||||||||||||||     
T  2179931 tcatcaccactaatggagcttttggacggagggaccattttgatggatgtctgtaaaattcagggattaaatagatatttcacaaaattcagggacgaat 2179832  T
Q  123 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    ||  ||||||||| ||||||||||||| |||||||||||||||||    
T  2179831 ttgaccgattttttaaaattcaaggacaaatttgaggtattagtc 2179787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 12738706 - 12738825
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||| | ||||||||| |||||||||| ||||| || |||||||||| |||||||||||    
T  12738706 acggagggactgatttgattgacattttgtaaattcagggactaaatagatatttcgcaaaattcaggtacgaatttggccgattttttaaaattcaagg 12738805  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  12738806 acgaatttgaggtattagtc 12738825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 12801529 - 12801648
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||| | ||||||||| |||||||||| ||||| || |||||||||| |||||||||||    
T  12801529 acggagggactgatttgattgacattttgtaaattcagggactaaatagatatttcgcaaaattcaggtacgaatttggccgattttttaaaattcaagg 12801628  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  12801629 acgaatttgaggtattagtc 12801648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 48 - 170
Target Start/End: Original strand, 8541241 - 8541363
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   ||||||| ||||||| | ||||||||| |||||||||||||||| || |||||||||| ||||||||| |    
T  8541241 acggagggactgatttgattgacattttgtaaattcaaggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaatg 8541340  T
Q  148 acgaatttgaggtattagtcctt 170  Q
    |||||||||||||||||||||||    
T  8541341 acgaatttgaggtattagtcctt 8541363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 48 - 165
Target Start/End: Original strand, 17577905 - 17578022
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   ||||||| | ||||||||||||||| | |||||||||||| |||||  ||||||||||||||||||||||    
T  17577905 acggagggactgatttgattgacattttgtaaattcatgaactaatttgatattttgcaaaattcagggaagaaatgggccgatttttcaaaattcaagg 17578004  T
Q  148 acgaatttgaggtattag 165  Q
    ||||||||||||||||||    
T  17578005 acgaatttgaggtattag 17578022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 23 - 168
Target Start/End: Original strand, 30468260 - 30468405
Alignment:
Q  23 tcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 122  Q
    ||||||| |||||||||  |||| |||||||||||   |||||||||||||||||||||||| ||||||| | ||||||||| |||||| || ||||||     
T  30468260 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattgagagacgaat 30468359  T
Q  123 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 168  Q
    ||  || |||||| |||||||||||||||| ||||||||| |||||    
T  30468360 ttgaccaattttttaaaattcaaggacgaaattgaggtatcagtcc 30468405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 31 - 167
Target Start/End: Complemental strand, 8539811 - 8539675
Alignment:
Q  31 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 130  Q
    |||||||||  |||| || |||| ||||  |||||||||||| ||||||||||||||||||| | ||||||||| |||||||| | ||||| ||    ||    
T  8539811 actaacggagcttttggatggagcgactattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcaagaacgaatttgattga 8539712  T
Q  131 tttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    |||||||||||||||||||||||||||||||||||||    
T  8539711 tttttcaaaattcaaggacgaatttgaggtattagtc 8539675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 18624985 - 18625129
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    ||||||||||||||||||||  |||| |||||| ||||   |||||||||||  ||||||||||||||||||| | ||||||||  ||||||||||||||    
T  18624985 acatcatcactactaacggagcttttggacggaaggaccattttgatggacgagtgtaaaattcagggactaaatagatatttcacaaaattcagggacg 18625084  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 164  Q
    || || || |||   | ||||||||||||||||||||||||||||    
T  18625085 aatttagctgatcagtgaaaattcaaggacgaatttgaggtatta 18625129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 78 - 167
Target Start/End: Complemental strand, 30463989 - 30463900
Alignment:
Q  78 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    ||||||||||||||| | ||||||||| |||||||||||||||| ||  ||||||||| |||||||||||||||||||||||||||||||    
T  30463989 aaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 30463900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 78 - 167
Target Start/End: Complemental strand, 42471637 - 42471548
Alignment:
Q  78 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    ||||||| | |||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||    
T  42471637 aaattcatgtactattttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 42471548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 28813735 - 28813856
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga--tttttcaaaattcaa 145  Q
    |||||||||||||||||||  || | |   ||||||||||||||| | ||||||||| |||||||| ||||||| || ||| |  |||||  ||||||||    
T  28813735 acggagggactgatttgatttacattttgtaaattcagggactaaatagatatttcgcaaaattcaaggacgaatttggccaatttttttttaaattcaa 28813834  T
Q  146 ggacgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||||    
T  28813835 ggacgaatttgaggtattagtc 28813856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 48 - 164
Target Start/End: Original strand, 28822060 - 28822176
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   ||||||| |||| || | |  |||||| |||||||||||||||| ||  || |||||| |||||||||||    
T  28822060 acggagggactgatttgattgacattttgtaaattcaaggacaaaatagcaatttcgcaaaattcagggacgaatttgacctatttttaaaaattcaagg 28822159  T
Q  148 acgaatttgaggtatta 164  Q
    |||||||||||||||||    
T  28822160 acgaatttgaggtatta 28822176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 34328797 - 34328916
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    |||||| |||||||||||| ||| | |   ||||||| |||| || | | ||||| | |||||||| ||||||| ||  ||||||||| |||||||||||    
T  34328797 acggagcgactgatttgattgacattttgtaaattcaaggacaaaatagctattttgcaaaattcatggacgaatttgaccgatttttgaaaattcaagg 34328896  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  34328897 acgaatttgaggtattagtc 34328916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 47 - 157
Target Start/End: Original strand, 18728606 - 18728716
Alignment:
Q  47 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 146  Q
    |||||||||||   |||||||||||||||  ||||||||||||||| ||||||||||| | |||| ||||||||| || |||||    | |||||||| |    
T  18728606 gacggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattaagggacgaagttggccgacaagtgaaaattcagg 18728705  T
Q  147 gacgaatttga 157  Q
    |||||||||||    
T  18728706 gacgaatttga 18728716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 76 - 157
Target Start/End: Original strand, 43492131 - 43492212
Alignment:
Q  76 taaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttga 157  Q
    ||||||||||||||||| | ||||||||| |||||||||||| ||| || || ||||||| |||||| ||| ||||||||||    
T  43492131 taaaattcagggactaaatagatatttcgcaaaattcagggatgaacttggctgatttttgaaaatttaagtacgaatttga 43492212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 38596974 - 38596878
Alignment:
Q  61 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttga 157  Q
    ||||||||||||||   ||||||||||||||| ||||||||||| | |||| ||||||||| || |||||    | |||||||||||||||||||||    
T  38596974 tttgatggacgtctaacaaattcagggactaagttgatatttcgcataattgagggacgaatttggccgacccataaaaattcaaggacgaatttga 38596878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 60 - 111
Target Start/End: Complemental strand, 27075927 - 27075876
Alignment:
Q  60 atttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaatt 111  Q
    ||||||||||||||||| ||||||||| ||||||||||||||| ||||||||    
T  27075927 atttgatggacgtctgttaaattcaggaactaatttgatattttgaaaaatt 27075876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 47 - 121
Target Start/End: Complemental strand, 32087634 - 32087560
Alignment:
Q  47 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 121  Q
    |||||||||||   ||||||||||||||| |||||| ||||||||| ||||||||||| | |||| |||||||||    
T  32087634 gacggagggacctttttgatggacgtctgaaaaattaagggactaagttgatatttcgcataattaagggacgaa 32087560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 157
Target Start/End: Complemental strand, 35395453 - 35395343
Alignment:
Q  47 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 146  Q
    |||||||||||   ||||||||||||||   ||||||||| ||||| ||||||||||| | |||| ||||||||| || |||||  | | |||||||| |    
T  35395453 gacggagggacctttttgatggacgtctaacaaattcaggaactaaattgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagg 35395354  T
Q  147 gacgaatttga 157  Q
    || ||||||||    
T  35395353 gatgaatttga 35395343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 157
Target Start/End: Original strand, 43318064 - 43318174
Alignment:
Q  47 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 146  Q
    |||||||||||   ||| |||||||||||  ||||||||||||||| ||||||||||| | |||| ||||| ||  || |||||    | ||||||||||    
T  43318064 gacggagggaccttttttatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgattttggccgacccataaaaattcaag 43318163  T
Q  147 gacgaatttga 157  Q
    |||||||||||    
T  43318164 gacgaatttga 43318174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 78 - 167
Target Start/End: Complemental strand, 32134320 - 32134231
Alignment:
Q  78 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    ||||||||||||||| | |||||||   ||||||||  |||||| || |  ||||||| ||||||||| ||| |||||||||||||||||    
T  32134320 aaattcagggactaaatagatattttacaaaattcaaagacgaatttggttgatttttgaaaattcaatgacaaatttgaggtattagtc 32134231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 164
Target Start/End: Complemental strand, 41493931 - 41493847
Alignment:
Q  80 attcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 164  Q
    ||||| ||||||| | ||||||||  ||||||   ||||||| || || ||||||| |||||||||||||||| |||||||||||    
T  41493931 attcatggactaaatagatatttcacaaaatttgaggacgaatttggctgatttttgaaaattcaaggacgaagttgaggtatta 41493847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 47 - 157
Target Start/End: Complemental strand, 33256520 - 33256410
Alignment:
Q  47 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 146  Q
    ||||||||||||  |||||||||||||||  |||||||  || ||| ||||||||||| | |||| | ||| ||| || |||||  | | |||||||| |    
T  33256520 gacggagggacttttttgatggacgtctgacaaattcaaagattaagttgatatttcgcataattgaaggatgaagttggccgacgtgtaaaaattcagg 33256421  T
Q  147 gacgaatttga 157  Q
    |||||||||||    
T  33256420 gacgaatttga 33256410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 121
Target Start/End: Complemental strand, 19997225 - 19997164
Alignment:
Q  60 atttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 121  Q
    |||||||| | |||||| ||||||||| | ||||||||||||| ||||||||  ||||||||    
T  19997225 atttgatgaatgtctgttaaattcaggaagtaatttgatattttgaaaaatttggggacgaa 19997164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 127 - 167
Target Start/End: Complemental strand, 28819388 - 28819348
Alignment:
Q  127 ccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    ||||||||| |||||||||||| |||||||| |||||||||    
T  28819388 ccgatttttaaaaattcaaggaggaatttgatgtattagtc 28819348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 120; Significance: 3e-61; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 20 - 167
Target Start/End: Original strand, 9121645 - 9121792
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  9121645 acatcatcactattaacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaatttagggacg 9121744  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    ||||| |||||||||||||||||||||||| | |||||||||||||||    
T  9121745 aaattggccgatttttcaaaattcaaggactattttgaggtattagtc 9121792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 20 - 167
Target Start/End: Original strand, 47013059 - 47013206
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||||  ||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  47013059 acatcatcactgttaacggacattttggacggagggactgatttgatggacgtttgcaaaattcagggactaatttgatatttcgaaaaattcagggacg 47013158  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    |||||  ||||||||||||||||||||||| | |||||||||||||||    
T  47013159 aaattgtccgatttttcaaaattcaaggactattttgaggtattagtc 47013206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 33602621 - 33602765
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    ||||||||| ||||||||||| |||| |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  33602621 acatcatcattactaacggaccttttggacggagggactaatttgacggacgtctgtaaaattcagggactaatttgatatttcacaaaattcagggacg 33602720  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 164  Q
    |||||  ||||||||||||||||||||||||||||||||||||||    
T  33602721 aaattgaccgatttttcaaaattcaaggacgaatttgaggtatta 33602765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 20 - 167
Target Start/End: Original strand, 46583533 - 46583680
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||| | |||||||| |||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||     
T  46583533 acatcatcaccattaacggaccttttggacggagggacaaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggaca 46583632  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    |||||  |||||||||||||||||||||||||||||||||||||||||    
T  46583633 aaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 46583680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 23 - 167
Target Start/End: Original strand, 4855946 - 4856090
Alignment:
Q  23 tcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 122  Q
    ||||||| | |||||||  |||| |||||||||||   |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |     
T  4855946 tcatcaccattaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgtat 4856045  T
Q  123 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    || |||||||||| |||||||||||||||||||||||||||||||    
T  4856046 ttggccgattttttaaaattcaaggacgaatttgaggtattagtc 4856090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 23 - 167
Target Start/End: Original strand, 34778118 - 34778262
Alignment:
Q  23 tcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 122  Q
    ||||||| |||||||||  |||| |||||||||||   |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |     
T  34778118 tcatcaccactaacggagcttttggacggagggaccattttgatggacatctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgtat 34778217  T
Q  123 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    || |||||||||| |||||||||||||||||||||||||||||||    
T  34778218 ttggccgattttttaaaattcaaggacgaatttgaggtattagtc 34778262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 46582129 - 46582010
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  46582129 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 46582030  T
Q  148 acgaatttgaggtattagtc 167  Q
    || |||||||||||||||||    
T  46582029 acaaatttgaggtattagtc 46582010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 78 - 167
Target Start/End: Complemental strand, 34776658 - 34776569
Alignment:
Q  78 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  34776658 aaattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 34776569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 48 - 169
Target Start/End: Original strand, 37345932 - 37346053
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||||||||||||||| |||||||||||| |||||| | ||||||||||||||||||||    
T  37345932 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggatgaaattggtcgatttttcaaaattcaagg 37346031  T
Q  148 acgaatttgaggtattagtcct 169  Q
    ||||||||||||||||||||||    
T  37346032 acgaatttgaggtattagtcct 37346053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 20 - 167
Target Start/End: Complemental strand, 2869726 - 2869579
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||| |||||| ||  |||| |||||||||||   |||||||||||||||||||||| || |||||| | ||||||||| ||||||||||||||    
T  2869726 acatcatcaccactaacagagcttttggacggagggaccattttgatggacgtctgtaaaatttagagactaaatagatatttcgcaaaattcagggacg 2869627  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    || ||  ||||||||| |||||||||||||||||||||||||||||||    
T  2869626 aatttgaccgatttttgaaaattcaaggacgaatttgaggtattagtc 2869579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 8168061 - 8167942
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   | ||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||    
T  8168061 acggagggactgatttgattgacattttgtacattcagggactaatttgatatttcgcaaaattcagagacgaaattggccgatttttcaaaattcaagg 8167962  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  8167961 acgaatttgaggtattagtc 8167942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 8169538 - 8169657
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||| ||||||||| ||| | |   ||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||    
T  8169538 acggagggattgatttgattgacattttgtaaattcagggactaatttgatattttgtaaaattcagggacgaaattggccgatttttcaaaattcaagg 8169637  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  8169638 acgaatttgaggtattagtc 8169657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 25276861 - 25276742
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||||||||||||||| |||||||| ||| |||||| ||||||||||||||||||||||    
T  25276861 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcaaggatgaaattggccgatttttcaaaattcaagg 25276762  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  25276761 acgaatttgaggtattagtc 25276742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 78 - 167
Target Start/End: Complemental strand, 26223676 - 26223587
Alignment:
Q  78 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  26223676 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 26223587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 23 - 167
Target Start/End: Original strand, 6818658 - 6818802
Alignment:
Q  23 tcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 122  Q
    ||||||| |||||||||  |||| |||||||||||   |||||||||||||||||||||||||||||||| | ||||||| |  |||| |||||||||      
T  6818658 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgctaaatccagggacgagt 6818757  T
Q  123 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    || |||||||||| |||||||||||||||||||||||||||||||    
T  6818758 ttggccgattttttaaaattcaaggacgaatttgaggtattagtc 6818802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 23 - 167
Target Start/End: Original strand, 25278348 - 25278492
Alignment:
Q  23 tcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 122  Q
    ||||||| |||||||||  |||| |||||||||||   |||||||||||| ||||||||||| ||||||| | | ||||||| ||||||||||||||||     
T  25278348 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtatgtaaaattcaaggactaaataggtatttcgcaaaattcagggacgaat 25278447  T
Q  123 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    ||  ||||||||| |||||||||||||||||||||||||||||||    
T  25278448 ttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 25278492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 23 - 167
Target Start/End: Original strand, 31238475 - 31238619
Alignment:
Q  23 tcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 122  Q
    ||||||| |||||||||  |||| ||| || ||||   |||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||| ||     
T  31238475 tcatcaccactaacggagcttttggacagatggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacaaat 31238574  T
Q  123 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    || |||||||||| ||||||||||||| |||||||||||||||||    
T  31238575 ttggccgattttttaaaattcaaggacaaatttgaggtattagtc 31238619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 9120158 - 9120039
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||| ||||||| ||| | |   |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  9120158 acggagggactaatttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcagggacgaaattgaccgatttttcaaaattcaagg 9120059  T
Q  148 acgaatttgaggtattagtc 167  Q
    || | |||||||||||||||    
T  9120058 actattttgaggtattagtc 9120039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 27089249 - 27089368
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||| ||||||||||||| ||| | |   ||||||||||| ||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||    
T  27089249 acggaaggactgatttgattgacattttgtaaattcagggattaatttgatatttcacaaaattcaaggacgaaatttgccgatttttcaaaattcaagg 27089348  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  27089349 acgaatttgaggtattagtc 27089368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 37344486 - 37344339
Alignment:
Q  23 tcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 122  Q
    ||||||| |||||||||  |||| |||||||||||   |||||||||||| |||||||||||  |||||| | | ||||||| ||||||||||||||||     
T  37344486 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtatgtaaaattcaaagactaaataggtatttcgcaaaattcagggacgaat 37344387  T
Q  123 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtcctt 170  Q
    ||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  37344386 ttgaccgattttttaaaattcaaggacgaatttgaggtattagtcctt 37344339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 20 - 167
Target Start/End: Complemental strand, 27087430 - 27087283
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||| |||||||||  |||| |||||| || |   |||||||||||| ||||||||||||||||||| | ||||||||| |||||||||||||     
T  27087430 acatcatcaccactaacggagcttttggacggatgggccattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcagggac- 27087332  T
Q  120 aaatttg-ccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    ||||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  27087331 aaatttgaccgattttttaaaatttaaggacgaatttgaggtattagtc 27087283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 47011575 - 47011456
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||| ||||| ||| | |   |||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||    
T  47011575 acggagggactgagttgattgactttttgtaaattcagggactaatttgatatttcgaaaaattcatggacgaaattgtccgatttttcaaaattcaagg 47011476  T
Q  148 acgaatttgaggtattagtc 167  Q
    || | |||||||||||||||    
T  47011475 actattttgaggtattagtc 47011456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 65 - 174
Target Start/End: Original strand, 25278975 - 25279084
Alignment:
Q  65 atggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 164  Q
    |||||||||||||||||||||||||||| | ||||||||| |||||| ||| ||||| || || ||||||| ||||||||||||||||||||||||||||    
T  25278975 atggacgtctgtaaaattcagggactaaatagatatttcgcaaaatttaggaacgaatttggctgatttttgaaaattcaaggacgaatttgaggtatta 25279074  T
Q  165 gtccttttta 174  Q
    ||| ||||||    
T  25279075 gtcattttta 25279084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 20 - 167
Target Start/End: Original strand, 51896129 - 51896276
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||| |||||| ||  |||| ||||||||||||  |||||||||| ||||||||||||||||||||| | ||||||||| |||||||||||||     
T  51896129 acatcatcaccactaacagagcttttggacggagggactattttgatggacatctgtaaaattcagggactaaatagatatttcgcaaaattcagggac- 51896227  T
Q  120 aaatttg-ccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    ||||||| | ||||||| |||||| ||||||| ||||||||||| ||||    
T  51896228 aaatttgactgattttttaaaatttaaggacggatttgaggtatcagtc 51896276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 1444151 - 1444270
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||| ||||||| ||| | |   ||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||| ||||    
T  1444151 acggagggactaatttgattgacattttgtaaattcagggactaatttgatattttgaaaaattcagggacaaaattggccgatttttcaaaatttaagg 1444250  T
Q  148 acgaatttgaggtattagtc 167  Q
    || | |||||||||||||||    
T  1444251 actattttgaggtattagtc 1444270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 20 - 167
Target Start/End: Original strand, 3013447 - 3013600
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatg------gacgtctgtaaaattcagggactaatttgatatttcgaaaaattca 113  Q
    |||||||||| |||||||||  |||| ||||||||||||  |||||||      ||||||||||||||||||||||||| | ||||||||| ||||||||    
T  3013447 acatcatcaccactaacggagcttttggacggagggactattttgatgtccatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattca 3013546  T
Q  114 gggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
     ||||||| ||  | ||| ||| |||||||||||||||||||||||||||||||    
T  3013547 tggacgaatttgactgatgttttaaaattcaaggacgaatttgaggtattagtc 3013600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 78 - 168
Target Start/End: Complemental strand, 4854499 - 4854409
Alignment:
Q  78 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 168  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||   |||||||||||||||||||||||||||||| ||||||||||    
T  4854499 aaattcagggactaatttgatctttcgcaaaattcagggacgaaattgaacgatttttcaaaattcaaggacgaatttgaagtattagtcc 4854409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 50556078 - 50556221
Alignment:
Q  24 catcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaat 123  Q
    |||||| |||||||||  |||| |||||||||||   |||||| ||||||||||||||| ||||||||| | ||||||||| ||||||||| |||||| |    
T  50556078 catcaccactaacggagcttttggacggagggaccattttgatagacgtctgtaaaatttagggactaaatagatatttcgcaaaattcagagacgaatt 50556177  T
Q  124 ttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    |  | ||||||| ||||||||| |||||||||||| ||||||||    
T  50556178 tgactgattttttaaaattcaaagacgaatttgagatattagtc 50556221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 31236938 - 31236819
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttg-ccgatttttcaaaattcaag 146  Q
    ||||||||||||||||||| ||  | |   ||||||||| ||||| | ||||||||| ||||||||||||| ||||||| ||||||||| ||||||||||    
T  31236938 acggagggactgatttgattgatattttgtaaattcaggaactaaatagatatttcgcaaaattcagggac-aaatttgaccgattttttaaaattcaag 31236840  T
Q  147 gacgaatttgaggtattagtc 167  Q
    |||||||||||||||||||||    
T  31236839 gacgaatttgaggtattagtc 31236819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 50 - 156
Target Start/End: Complemental strand, 33599335 - 33599229
Alignment:
Q  50 ggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggac 149  Q
    ||||||||||||||||| ||| | |   |||||||| || ||||||||||||||| |||||||| ||||||| ||  |||||||||||||||||||||||    
T  33599335 ggagggactgatttgattgacattttgtaaattcagagattaatttgatatttcgcaaaattcatggacgaatttgaccgatttttcaaaattcaaggac 33599236  T
Q  150 gaatttg 156  Q
    |||||||    
T  33599235 gaatttg 33599229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 1442668 - 1442599
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggac 89  Q
    |||||||||||  ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  1442668 acatcatcactgttaacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggac 1442599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 52642007 - 52641888
Alignment:
Q  48 acggagggactgatttgatggacgtct-gtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 146  Q
    |||||||||||||||||||| || | | ||||| || ||| ||||| |  |||||||| |||||||||||||||| || || ||||||| ||||||||||    
T  52642007 acggagggactgatttgatgaacattttgtaaatttgagg-actaaatatatatttcgcaaaattcagggacgaatttggctgatttttgaaaattcaag 52641909  T
Q  147 gacgaatttgaggtattagtc 167  Q
    |||||||||||||||||||||    
T  52641908 gacgaatttgaggtattagtc 52641888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 2871046 - 2871165
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   |||||||  ||| || | | ||||||| |||||||||||||||| || |||||||||| |||||||||||    
T  2871046 acggagggactgatttgattgacattttgtaaattcaaagacaaaatagctatttcgcaaaattcagggacgaatttagccgatttttaaaaattcaagg 2871145  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||| ||||||||    
T  2871146 acgaatttgagatattagtc 2871165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 15104588 - 15104487
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||| ||||| |||  |||| |||||| ||||   |||||||||||||||||||||||||||||||| | ||||||||| |||||||||| |||    
T  15104588 acatcatcaccactaatggagcttttggacggaaggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaggaacg 15104489  T
Q  120 aa 121  Q
    ||    
T  15104488 aa 15104487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 76 - 164
Target Start/End: Original strand, 52643648 - 52643736
Alignment:
Q  76 taaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 164  Q
    ||||||||||||||||| |  |||||||| |||||||||||||||| ||  | ||||||| |||||| |||||||||||||||||||||    
T  52643648 taaaattcagggactaaataaatatttcgcaaaattcagggacgaatttaactgatttttaaaaatttaaggacgaatttgaggtatta 52643736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 37088106 - 37088225
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   ||||| | |||| || | | ||||||| |||||||||| ||||| || |||||||||| |||||||||||    
T  37088106 acggagggactgatttgattgacattttgtaaatttaaggacaaaatagctatttcgcaaaattcaggaacgaatttggccgattttttaaaattcaagg 37088205  T
Q  148 acgaatttgaggtattagtc 167  Q
    | ||||||||||||||||||    
T  37088206 aagaatttgaggtattagtc 37088225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 52 - 166
Target Start/End: Complemental strand, 50554278 - 50554164
Alignment:
Q  52 agggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacga 151  Q
    ||||||||||||||| ||| | |   ||||||||| ||||| | | |||||   |||||||||||||||| ||  ||||||||| |||||||||||||||    
T  50554278 agggactgatttgattgacattttgcaaattcaggaactaaatagctattttacaaaattcagggacgaatttgaccgattttttaaaattcaaggacga 50554179  T
Q  152 atttgaggtattagt 166  Q
    |||||||||||||||    
T  50554178 atttgaggtattagt 50554164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 106 - 167
Target Start/End: Complemental strand, 33599248 - 33599187
Alignment:
Q  106 aaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    |||||||| ||||||| ||  |||||||||||||||||||||||||||||||||||||||||    
T  33599248 aaaattcaaggacgaatttgcccgatttttcaaaattcaaggacgaatttgaggtattagtc 33599187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 1442611 - 1442551
Alignment:
Q  106 aaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagt 166  Q
    ||||||||||||||||||| |||||||||||||||||||||||| | | ||||||||||||    
T  1442611 aaaattcagggacgaaattggccgatttttcaaaattcaaggactattgtgaggtattagt 1442551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 48 - 164
Target Start/End: Complemental strand, 3011974 - 3011858
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||| ||||||||||||| ||| | |   |||||||| |||||| | ||||||||| |||||||||| ||||| ||  | ||||||| |||||| ||||    
T  3011974 acggatggactgatttgattgacattttgtaaattcagagactaaatagatatttcgcaaaattcaggaacgaatttgactgattttttaaaatttaagg 3011875  T
Q  148 acgaatttgaggtatta 164  Q
    |||||||||||||||||    
T  3011874 acgaatttgaggtatta 3011858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 6816926 - 6816866
Alignment:
Q  106 aaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagt 166  Q
    |||||||||||||||| ||  ||||||||| ||||||||||||||||||||||||||||||    
T  6816926 aaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagt 6816866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 87 - 167
Target Start/End: Complemental strand, 25278934 - 25278854
Alignment:
Q  87 gactaatttgatatttcgaaaaattcagggacgaaatttgcc-gatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    |||||| | ||||||||| ||||||||||||| ||||||| | ||||||| |||||||||||| ||||||||||||||||||    
T  25278934 gactaaatagatatttcgcaaaattcagggac-aaatttgactgatttttgaaaattcaaggatgaatttgaggtattagtc 25278854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 48 - 164
Target Start/End: Complemental strand, 51894686 - 51894570
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttg-ccgatttttcaaaattcaag 146  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||| |  |||||||| ||||||||| ||| ||||||| || |||||| ||||||||||    
T  51894686 acggagggactgatttgattgacattttgtaaattcagggactaaatatatatttcgcaaaattcagagac-aaatttgacccattttttaaaattcaag 51894588  T
Q  147 gacgaatttgaggtatta 164  Q
     |||||||||| ||||||    
T  51894587 aacgaatttgatgtatta 51894570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 47 - 157
Target Start/End: Complemental strand, 42134602 - 42134492
Alignment:
Q  47 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 146  Q
    |||||||||||   |||||||||||||||  ||||||||||||||| ||||||||||| | |||| ||||| ||  || |||||    | ||||||||||    
T  42134602 gacggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgattttggccgacccgtaaaaattcaag 42134503  T
Q  147 gacgaatttga 157  Q
    |||||||||||    
T  42134502 gacgaatttga 42134492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 78 - 167
Target Start/End: Complemental strand, 23577725 - 23577636
Alignment:
Q  78 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    |||||||  |||||||||||||||||| |||||| | || |||||||  |||||||||||  ||| ||||| |||||||| |||||||||    
T  23577725 aaattcattgactaatttgatatttcgcaaaattgaaggtcgaaattgcccgatttttcaggattgaaggatgaatttgatgtattagtc 23577636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 107 - 167
Target Start/End: Complemental strand, 45045009 - 45044949
Alignment:
Q  107 aaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    ||||||||||||||| |   || |||||| |||||||||||||||||||||||||||||||    
T  45045009 aaattcagggacgaattggaccaattttttaaaattcaaggacgaatttgaggtattagtc 45044949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 5783500 - 5783427
Alignment:
Q  31 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcg 104  Q
    |||||||||| |||| |||||||||||  | ||||||||||||    |||||||||||||| ||||||||||||    
T  5783500 actaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcg 5783427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 18183961 - 18184017
Alignment:
Q  61 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcaggga 117  Q
    |||||||||||||||  ||||||||||||||| ||||||||||| | |||| |||||    
T  18183961 tttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgaggga 18184017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 121
Target Start/End: Original strand, 36895528 - 36895588
Alignment:
Q  61 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 121  Q
    |||||||||||||||  ||||||||||||||| ||||||||||| | |||| | |||||||    
T  36895528 tttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgatggacgaa 36895588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 121
Target Start/End: Complemental strand, 27940727 - 27940654
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 121  Q
    ||||||||||   |||||||||||||||  ||||||| ||| ||| ||||||||||| | |||| |||||||||    
T  27940727 acggagggacctttttgatggacgtctgataaattcaaggattaaattgatatttcgcataattgagggacgaa 27940654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 117; Significance: 2e-59; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 20 - 168
Target Start/End: Complemental strand, 43519571 - 43519423
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||||| ||| |||| |||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  43519571 acatcatcactattaatggaccttttggacggagggacggatttgatggacgtttgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 43519472  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 168  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  43519471 aaattggccgatttttcaaaattcaaggacgaatttgaggtattagtcc 43519423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 48 - 168
Target Start/End: Original strand, 4173710 - 4173830
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||| ||||| ||||| |   ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  4173710 acggagggactgagttgattgacgttttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 4173809  T
Q  148 acgaatttgaggtattagtcc 168  Q
    |||||||||||||||||||||    
T  4173810 acgaatttgaggtattagtcc 4173830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 43507286 - 43507167
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  43507286 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 43507187  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  43507186 acgaatttgaggtattagtc 43507167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 43508623 - 43508742
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  43508623 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 43508722  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  43508723 acgaatttgaggtattagtc 43508742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 20 - 166
Target Start/End: Complemental strand, 49523271 - 49523125
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||| |||||||||  |||| |||||||||||   ||||||| |||||||||||||||||||||||| | ||||||||| |||||||| |||||    
T  49523271 acatcatcaccactaacggattttttggacggagggaccattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcatggacg 49523172  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagt 166  Q
    || || |||||||||| ||||||||| ||||||||||||||||||||    
T  49523171 aatttagccgattttttaaaattcaatgacgaatttgaggtattagt 49523125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 41761723 - 41761867
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||| ||||||| |  |||| |||||||||||   |||||||||||||||||||||||||||||||| | ||||||||| ||||||  ||||||    
T  41761723 acatcatcaccactaacgaagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaatttcgggacg 41761822  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 164  Q
    || || |||||||||| ||||||||||||||||||||||||||||    
T  41761823 aatttggccgatttttgaaaattcaaggacgaatttgaggtatta 41761867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 48 - 168
Target Start/End: Original strand, 33265980 - 33266100
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||     
T  33265980 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcaggaacgaaattagccgatttttcaaaattcaaga 33266079  T
Q  148 acgaatttgaggtattagtcc 168  Q
    ||||||||||| |||||||||    
T  33266080 acgaatttgagatattagtcc 33266100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 319392 - 319273
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    |||||||||||| |||||| ||| | |   ||||||||| ||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||    
T  319392 acggagggactggtttgattgacattttgtaaattcaggaactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaagg 319293  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  319292 acgaatttgaggtattagtc 319273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 5437930 - 5437811
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||| ||||||| ||| | |   |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  5437930 acggagggactaatttgattgacattttgtaaattcagggactattttgatatttcgaataattcagggacgaaatttgccgatttttcaaaattcaagg 5437831  T
Q  148 acgaatttgaggtattagtc 167  Q
    || | |||||||||||||||    
T  5437830 actattttgaggtattagtc 5437811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 33264501 - 33264382
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   ||||||||| ||||||||||||||| | |||||||||||||||||||  |||||||||||||||||||||    
T  33264501 acggagggactgatttgattgacattttgtaaattcaggaactaatttgatattttgcaaaattcagggacgaaattgaccgatttttcaaaattcaagg 33264402  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  33264401 acgaatttgaggtattagtc 33264382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 51013856 - 51013975
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   ||||||||||||| ||||||||||| | |||||||||||||||||||  |||||||||||||||||||||    
T  51013856 acggagggactgatttgattgacattttgtaaattcagggactcatttgatattttgcaaaattcagggacgaaattgaccgatttttcaaaattcaagg 51013955  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  51013956 acgaatttgaggtattagtc 51013975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 833342 - 833223
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||| ||||||| ||| | |   |||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  833342 acggagggactaatttgattgacattttgtaaattcagggactattttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaagg 833243  T
Q  148 acgaatttgaggtattagtc 167  Q
    || | |||||||||||||||    
T  833242 actattttgaggtattagtc 833223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 5439617 - 5439736
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||| ||||||| ||| | |   |||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  5439617 acggagggactaatttgattgacattttgtaaattcagggactattttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaagg 5439716  T
Q  148 acgaatttgaggtattagtc 167  Q
    || | |||||||||||||||    
T  5439717 actattttgaggtattagtc 5439736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 23 - 167
Target Start/End: Complemental strand, 51012070 - 51011926
Alignment:
Q  23 tcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 122  Q
    |||||||||||||| ||  |||| |||||||||||   ||||||||||||||||||||||||| |||||| | ||||||||| |||||||| | | |||     
T  51012070 tcatcactactaacagagcttttggacggagggaccattttgatggacgtctgtaaaattcagagactaaatagatatttcgcaaaattcaagaaagaat 51011971  T
Q  123 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    ||  ||||||||| |||||||||||||||||||||| ||||||||    
T  51011970 ttgaccgattttttaaaattcaaggacgaatttgagatattagtc 51011926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 320870 - 320989
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||| ||||| ||| | |   || |||| ||||||||||||||||||| |||||||| ||| |||||| ||||||||||||||||||||||    
T  320870 acggagggactgagttgattgacattttgtaatttcaaggactaatttgatatttcgcaaaattcaaggatgaaattggccgatttttcaaaattcaagg 320969  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  320970 acgaatttgaggtattagtc 320989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 835012 - 835131
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||| ||||||| ||||| |   |||||||||||||| |||||||||||||| ||||||||||| ||||| | ||||||||||||||||||||    
T  835012 acggagggactaatttgattgacgttttgtaaattcagggactattttgatatttcgaataattcagggacaaaattggtcgatttttcaaaattcaagg 835111  T
Q  148 acgaatttgaggtattagtc 167  Q
    || | |||||||||||||||    
T  835112 actattttgaggtattagtc 835131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 4169805 - 4169686
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    |||||||||||| |||||| ||| | |   ||||||||||||||||||||||||||| ||||||||| |||||||||   | ||||||||||||||||||    
T  4169805 acggagggactggtttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagagacgaaattgatcaatttttcaaaattcaagg 4169706  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  4169705 acgaatttgaggtattagtc 4169686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 20 - 176
Target Start/End: Complemental strand, 41781686 - 41781530
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||  |||||||||  |||| |||||||||||   ||||||||| |||||||||||||||||||||| |  |||||| | |||||||||||||     
T  41781686 acatcatcatcactaacggagcttttggacggagggaccattttgatggatgtctgtaaaattcagggactaaataaatattttgcaaaattcagggac- 41781588  T
Q  120 aaatttg-ccgatttttcaaaattcaaggacgaatttgaggtattagtcctttttata 176  Q
    ||||||| ||||||||| |||||||||| || ||||||||||||||||| || |||||    
T  41781587 aaatttgaccgattttttaaaattcaagaacaaatttgaggtattagtcattattata 41781530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 35401868 - 35401749
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   ||||||| ||||||| | ||||||||  |||||||||||||||| || |||||||||| |||||||||||    
T  35401868 acggagggactgatttgattgacattttgtaaattcaaggactaaatagatatttcacaaaattcagggacgaatttggccgattttttaaaattcaagg 35401769  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  35401768 acgaatttgaggtattagtc 35401749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 23 - 167
Target Start/End: Original strand, 35404425 - 35404569
Alignment:
Q  23 tcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 122  Q
    ||||||| |||||||||  |||| |||||| ||||   |||| ||||||||||||||||||||||| ||| |  |||||||| |||||| | |||||||     
T  35404425 tcatcaccactaacggagcttttggacggatggaccattttgttggacgtctgtaaaattcagggattaaataaatatttcgcaaaattgaaggacgaat 35404524  T
Q  123 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    || |||||||||| |||||||||| | |||| |||||||||||||    
T  35404525 ttagccgattttttaaaattcaagtatgaatctgaggtattagtc 35404569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 168
Target Start/End: Complemental strand, 48813934 - 48813786
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||| || ||| ||  |||| |||| ||||||   |||||||||||||| ||||||||||| ||||| |  |||||| | ||||||||||||      
T  48813934 acatcatcaccaccaacagagcttttggacgaagggaccattttgatggacgtctataaaattcaggaactaaatatatattttgcaaaattcagggata 48813835  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 168  Q
    || || || ||||||| ||||||||||||||||||||||||||||||||    
T  48813834 aatttggctgatttttgaaaattcaaggacgaatttgaggtattagtcc 48813786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 49524703 - 49524822
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||| ||||||||||||| ||| | |   ||||||||||||||| | | ||||| | |||||||||||||||| ||  ||||||||| |||||||||||    
T  49524703 acggaaggactgatttgattgacattttgtaaattcagggactaaatagctattttgcaaaattcagggacgaatttgaccgattttttaaaattcaagg 49524802  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  49524803 acgaatttgaggtattagtc 49524822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 48 - 157
Target Start/End: Complemental strand, 39345683 - 39345574
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    |||||| |||||||||||| ||| | |   ||||||||||||||| | | ||||||| |||||||||||||||| || |||||||||| |||||||||||    
T  39345683 acggagagactgatttgattgacattttgtaaattcagggactaaatagctatttcgcaaaattcagggacgaatttggccgattttttaaaattcaagg 39345584  T
Q  148 acgaatttga 157  Q
    ||||||||||    
T  39345583 acgaatttga 39345574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 20493946 - 20493827
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   ||||||||| ||||| | ||||||||| |||||||| | ||||| || |||||| ||| ||||||||| |    
T  20493946 acggagggactgatttgattgacattttgtaaattcaggaactaaatagatatttcgcaaaattcaagaacgaatttggccgatattttaaaattcaatg 20493847  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  20493846 acgaatttgaggtattagtc 20493827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 78 - 162
Target Start/End: Original strand, 43521109 - 43521193
Alignment:
Q  78 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtat 162  Q
    ||||||||||||||||||||||||||| ||||||||   ||||||||  | |||||||||||||||||| || ||||||||||||    
T  43521109 aaattcagggactaatttgatatttcgcaaaattcaaaaacgaaattgactgatttttcaaaattcaagaacaaatttgaggtat 43521193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 48645374 - 48645255
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||| |||||||||||| || | |   ||||||  ||||||| | ||||||||| |||||||| ||||||| ||  | ||||||| |||||||||||    
T  48645374 acggaggtactgatttgatgaacattttgtaaattcgaggactaaatagatatttcgcaaaattcatggacgaatttgactgatttttgaaaattcaagg 48645275  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  48645274 acgaatttgaggtattagtc 48645255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 148
Target Start/End: Original strand, 48646724 - 48646852
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||| ||||||| |  |||| |||||| ||||   ||||||| | |||||||||||||||||||||| | |||||||||  ||||||| |||||    
T  48646724 acatcatcaccactaacgaagcttttggacggaaggaccattttgatgaaggtctgtaaaattcagggactaaatagatatttcgctaaattcaaggacg 48646823  T
Q  120 aaatttgccgatttttcaaaattcaagga 148  Q
    || || || || |||| ||||||||||||    
T  48646824 aatttagctgacttttgaaaattcaagga 48646852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 51 - 164
Target Start/End: Complemental strand, 11601786 - 11601674
Alignment:
Q  51 gagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttg-ccgatttttcaaaattcaaggac 149  Q
    ||||||||  ||||||||||||||||||||||||||||||||| | |||||| | ||||||  ||||  ||||||| | ||||||| |||||||||| ||    
T  11601786 gagggactattttgatggacgtctgtaaaattcagggactaatat-atattttgcaaaatttgggga-taaatttgactgatttttgaaaattcaagaac 11601689  T
Q  150 gaatttgaggtatta 164  Q
    |||||| ||||||||    
T  11601688 gaattttaggtatta 11601674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 20 - 118
Target Start/End: Complemental strand, 42980782 - 42980684
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggac 118  Q
    |||||||||| |||||| ||  |||| |||||||||||   |||||||||||||||||||||| ||||||||| | || |||||| |||||||| ||||    
T  42980782 acatcatcaccactaacagagcttttggacggagggaccattttgatggacgtctgtaaaattaagggactaaatagaaatttcgtaaaattcatggac 42980684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 48 - 173
Target Start/End: Complemental strand, 11254238 - 11254113
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   ||||||| |||| ||   | ||||||| |||||| || |||| | || |||||||||| |||||||||||    
T  11254238 acggagggactgatttgattgacattttgtaaattcaaggacaaaagagctatttcgcaaaatttagagacggatttggccgatttttaaaaattcaagg 11254139  T
Q  148 acgaatttgaggtattagtccttttt 173  Q
    |||||||||||||||| ||| |||||    
T  11254138 acgaatttgaggtatttgtcattttt 11254113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 31 - 130
Target Start/End: Complemental strand, 39083775 - 39083676
Alignment:
Q  31 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 130  Q
    |||||||||| |||| |||||||||||  | ||||||||||||    |||||||||||||| ||||||||||||  ||||| ||||||||| || |||||    
T  39083775 actaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggccga 39083676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 44558511 - 44558607
Alignment:
Q  61 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttga 157  Q
    |||||||||||||||  ||||||||||||||| ||||||||||| | |||| ||||| ||| || |||||    | |||||||||||||||| ||||    
T  44558511 tttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttggccgacccgtgaaaattcaaggacgaagttga 44558607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 31 - 130
Target Start/End: Complemental strand, 5484676 - 5484577
Alignment:
Q  31 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 130  Q
    |||||||||| |||| |||||||||||  | ||||||||||||    |||||||||||||| ||||||||||||  |||||  |||||||| || |||||    
T  5484676 actaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccga 5484577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 31 - 130
Target Start/End: Complemental strand, 39921630 - 39921531
Alignment:
Q  31 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 130  Q
    |||||||||| |||| |||||||||||  | ||||||||||||    |||||||||||||| ||||||||||||  |||||  |||||||| || |||||    
T  39921630 actaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccga 39921531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 31 - 130
Target Start/End: Original strand, 43779855 - 43779954
Alignment:
Q  31 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 130  Q
    |||||||||| |||| |||||||||||  | ||||||||||||    |||||||||||||| ||||||||||||  |||||  |||||||| || |||||    
T  43779855 actaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccga 43779954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 173
Target Start/End: Complemental strand, 2691485 - 2691368
Alignment:
Q  55 gactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatt 154  Q
    |||||||||||| ||| | |  |||||||||||||||| | ||||||| | ||||||   ||||||| || || ||||||| ||||||||| || ||| |    
T  2691485 gactgatttgattgacattttaaaaattcagggactaaatagatattttgcaaaatttgtggacgaatttggctgatttttgaaaattcaa-gatgaagt 2691387  T
Q  155 tgaggtattagtccttttt 173  Q
    |||||||||| ||||||||    
T  2691386 tgaggtattattccttttt 2691368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 33 - 130
Target Start/End: Complemental strand, 39189516 - 39189419
Alignment:
Q  33 taacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 130  Q
    |||||||| |||| |||||||||||  | ||||||||||||    |||||||||||||| ||||||||||||  |||||  |||||||| || |||||    
T  39189516 taacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccga 39189419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 48 - 121
Target Start/End: Original strand, 44794765 - 44794838
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 121  Q
    ||||||||||   |||||||||||||||  ||||||||||| ||| ||||||||||| | |||| |||||||||    
T  44794765 acggagggacctttttgatggacgtctgataaattcagggattaaattgatatttcgcataattgagggacgaa 44794838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 166
Target Start/End: Complemental strand, 20820096 - 20819986
Alignment:
Q  56 actgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgcc-gatttttcaaaattcaaggacgaatt 154  Q
    ||||||||||| ||| | |  |||||||||||||||| |  |||||| | |||||| ||| |  ||||||| | ||||||| |||||||||||||||| |    
T  20820096 actgatttgattgacattttgaaaattcagggactaaataaatattttgcaaaatttaggaat-aaatttgactgatttttgaaaattcaaggacgaagt 20819998  T
Q  155 tgaggtattagt 166  Q
    ||||||||||||    
T  20819997 tgaggtattagt 20819986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 104
Target Start/End: Complemental strand, 27624912 - 27624869
Alignment:
Q  61 tttgatggacgtctgtaaaattcagggactaatttgatatttcg 104  Q
    |||||||||||||||  ||||||||||||||| |||||||||||    
T  27624912 tttgatggacgtctgacaaattcagggactaagttgatatttcg 27624869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 130
Target Start/End: Complemental strand, 32652235 - 32652136
Alignment:
Q  31 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 130  Q
    |||||||||| |||| |||||||||||  | ||||||||||||    ||||||| |||||| ||||||||||||  |||||  |||||||| || |||||    
T  32652235 actaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcaaggactattttgatatttcgttaaattgggggacgaatttggccga 32652136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 42982422 - 42982541
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   ||||||| |||| || |   ||||||| |||||||||||||||| ||  | ||||||| |||||||||||    
T  42982422 acggagggactgatttgattgacattttgtaaattcaaggacaaaataactatttcgcaaaattcagggacgaatttgacagatttttaaaaattcaagg 42982521  T
Q  148 acgaatttgaggtattagtc 167  Q
    |  ||||| | |||||||||    
T  42982522 aaaaatttaacgtattagtc 42982541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 130
Target Start/End: Original strand, 44994275 - 44994374
Alignment:
Q  31 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 130  Q
    |||||||||| |||| || ||||||||  | ||||||||||||    |||||||||||||| ||||||||||||  |||||  |||||||| || |||||    
T  44994275 actaacggaccttttggatggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccga 44994374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 148
Target Start/End: Original strand, 52868167 - 52868254
Alignment:
Q  61 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagga 148  Q
    |||||| | ||||||| |||||||| |||||| | ||||||||| |||||| |  |||||| ||  ||||||||| ||||||||||||    
T  52868167 tttgataggcgtctgttaaattcagagactaaatagatatttcgcaaaatttatagacgaatttgaccgattttttaaaattcaagga 52868254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 47 - 121
Target Start/End: Complemental strand, 35996183 - 35996109
Alignment:
Q  47 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 121  Q
    |||||||||||   |||||||||||||||  ||||||||||| ||| ||||||||| | | |||| |||||||||    
T  35996183 gacggagggacctttttgatggacgtctgataaattcagggattaaattgatattttgcacaattgagggacgaa 35996109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 157
Target Start/End: Original strand, 10372711 - 10372820
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||   |||||||||||||||  |||||||||||  || ||||||||||| | |||| |||||| || || |||||    | |||||||| ||    
T  10372711 acggagggacctttttgatggacgtctgacaaattcagggatgaaattgatatttcgcataattgagggactaatttggccgacgcgtgaaaattcaggg 10372810  T
Q  148 acgaatttga 157  Q
    ||||||||||    
T  10372811 acgaatttga 10372820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 121
Target Start/End: Complemental strand, 47941930 - 47941857
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 121  Q
    ||||||||||   |||||||||||||||  ||||||||||| ||| ||||||||||| | |||| || ||||||    
T  47941930 acggagggacctttttgatggacgtctgataaattcagggattaaattgatatttcgcataattgagagacgaa 47941857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 76 - 164
Target Start/End: Original strand, 2693285 - 2693373
Alignment:
Q  76 taaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 164  Q
    |||||||||  |||||| | ||||||||| |||||| ||| |  || || || ||||||| ||||||||| |||||| |||||||||||    
T  2693285 taaaattcaaagactaaatagatatttcgcaaaatttaggaataaatttggctgattttttaaaattcaaagacgaagttgaggtatta 2693373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 103
Target Start/End: Complemental strand, 2827524 - 2827468
Alignment:
Q  47 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttc 103  Q
    |||||||||||   |||||||||||||||  ||||||| ||||||| ||||||||||    
T  2827524 gacggagggacctttttgatggacgtctgacaaattcaaggactaagttgatatttc 2827468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 121
Target Start/End: Original strand, 13450998 - 13451058
Alignment:
Q  61 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 121  Q
    |||||||||||||||  ||||||| |||||| ||||||||||||  |||||  ||||||||    
T  13450998 tttgatggacgtctgataaattcaaggactattttgatatttcgttaaattgggggacgaa 13451058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 116; Significance: 8e-59; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 20 - 167
Target Start/End: Complemental strand, 3441 - 3294
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||||| |||||||| |||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||     
T  3441 acatcatcactattaacggaccttttggacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggaca 3342  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3341 aaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 3294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 20 - 167
Target Start/End: Complemental strand, 4613 - 4466
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||||| |||||||| |||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||     
T  4613 acatcatcactattaacggaccttttggacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggaca 4514  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  4513 aaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 4466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 14313 - 14432
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  14313 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaatttgccgatttttcaaaattcaagg 14412  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  14413 acgaatttgaggtattagtc 14432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 113; Significance: 5e-57; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 20 - 168
Target Start/End: Original strand, 32455868 - 32456016
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    ||||||||| || ||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  32455868 acatcatcattattaacggacattttggacggagggactgatttgatggacgtctgcaaaattcagtgactaatttgatatttcgaaaaattcagggacg 32455967  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 168  Q
    |||||  ||||||||||||||||||||||| | ||||||||||||||||    
T  32455968 aaattgaccgatttttcaaaattcaaggactattttgaggtattagtcc 32456016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 3456893 - 3456766
Alignment:
Q  22 atcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 121  Q
    |||||||||| ||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  3456893 atcatcactattaacggatattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 3456794  T
Q  122 atttgccgatttttcaaaattcaaggac 149  Q
    ||| ||||||||||||||||||||||||    
T  3456793 attggccgatttttcaaaattcaaggac 3456766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 20 - 167
Target Start/End: Original strand, 13613559 - 13613706
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||| ||||| |||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  13613559 acatcatcaccactaatggaccttttggacggagggactaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 13613658  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    || ||  ||||||||||||||||||||||||||||| |||||||||||    
T  13613659 aatttgaccgatttttcaaaattcaaggacgaatttaaggtattagtc 13613706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 32518467 - 32518586
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||    
T  32518467 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggatgaaattggccgatttttcaaaattcaagg 32518566  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  32518567 acgaatttgaggtattagtc 32518586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 23 - 167
Target Start/End: Original strand, 32439071 - 32439215
Alignment:
Q  23 tcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 122  Q
    |||||||||||||| ||  |||| |||||||||||   |||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||     
T  32439071 tcatcactactaacagatcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaat 32439170  T
Q  123 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    ||  ||||||||| ||||||||| ||| |||||||||||||||||    
T  32439171 ttgaccgattttttaaaattcaatgactaatttgaggtattagtc 32439215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 3480627 - 3480746
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||| ||||||| ||| | |   |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  3480627 acggagggactaatttgattgacattttgtaaattcagggactagtttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaagg 3480726  T
Q  148 acgaatttgaggtattagtc 167  Q
    || | |||||||||||||||    
T  3480727 actattttgaggtattagtc 3480746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 32454367 - 32454248
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||| ||||||| ||| | |   |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  32454367 acggagggactaatttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcaaggacgaaattggccgatttttcaaaattcaagg 32454268  T
Q  148 acgaatttgaggtattagtc 167  Q
    || | |||||||||||||||    
T  32454267 actattttgaggtattagtc 32454248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 20 - 166
Target Start/End: Complemental strand, 20523513 - 20523367
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||| |||||| ||  |||| |||||||||||   |||||||||||||||||||||||||||||||| | ||||||||| |||||||| |||||    
T  20523513 acatcatcaccactaacagaacttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacg 20523414  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagt 166  Q
    || ||  ||||||||| ||||||| |||| |||||||| ||||||||    
T  20523413 aatttgaccgatttttgaaaattctaggaagaatttgatgtattagt 20523367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 23 - 167
Target Start/End: Complemental strand, 32517021 - 32516877
Alignment:
Q  23 tcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 122  Q
    ||||||| |||||||||  |||| |||||||||||   |||||||||||| ||||||||||| || |||| | | ||||| | ||||||||||||||||     
T  32517021 tcatcaccactaacggagcttttggacggagggacaattttgatggacgtatgtaaaattcaagggctaaataggtattttgtaaaattcagggacgaat 32516922  T
Q  123 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    ||  ||||||||| |||||||||||||||||||||||||||||||    
T  32516921 ttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 32516877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 20 - 163
Target Start/End: Complemental strand, 10568546 - 10568403
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||| |||||||||  |||| ||||||||||||  |||||| ||||||||||||||||||||||||| |  ||||||||  ||||||| |||||    
T  10568546 acatcatcaccactaacggagcttttggacggagggactattttgatagacgtctgtaaaattcagggactaaataaatatttcgctaaattcaaggacg 10568447  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtatt 163  Q
    || ||  | ||||||| ||||||||||||||||||||| |||||    
T  10568446 aatttgactgatttttgaaaattcaaggacgaatttgatgtatt 10568403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 18645074 - 18645192
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   ||||||| ||||||||||||||||||| ||||||||| |||||| | | |||||||||||||||||||||    
T  18645074 acggagggactgatttgattgacattttgtaaattcatggactaatttgatatttcgcaaaattcagagacgaattgt-ccgatttttcaaaattcaagg 18645172  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  18645173 acgaatttgaggtattagtc 18645192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 7372935 - 7373079
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||| ||||| |||  |||| |||||||||||   ||||||||||| |||||||||||||||||||| |  |||||||| ||||||||||||||    
T  7372935 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgcctgtaaaattcagggactaaataaatatttcgcaaaattcagggacg 7373034  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 164  Q
    || ||  || |||||| |||||||||  |||||||||||||||||    
T  7373035 aatttgaccaatttttaaaaattcaatcacgaatttgaggtatta 7373079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 23 - 166
Target Start/End: Complemental strand, 11355366 - 11355223
Alignment:
Q  23 tcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 122  Q
    ||||||| |||| ||||  |||| |||||||||||   |||| ||| ||||||||||||||||||| | | | ||||||||  ||||||||| ||||||     
T  11355366 tcatcaccactaccggagcttttggacggagggaccattttggtggccgtctgtaaaattcagggagttaatagatatttcataaaattcagtgacgaat 11355267  T
Q  123 tttgccgatttttcaaaattcaaggacgaatttgaggtattagt 166  Q
    ||  ||||||||| ||||||||||||||||||||||||||||||    
T  11355266 ttgaccgattttttaaaattcaaggacgaatttgaggtattagt 11355223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 47 - 167
Target Start/End: Original strand, 10569888 - 10570008
Alignment:
Q  47 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 146  Q
    |||||||||||||||||||||||| | |   ||||||  ||||||| | ||||||| | |||||||| ||||||| || || ||||||| ||||||||||    
T  10569888 gacggagggactgatttgatggacattttgtaaattcgaggactaaatagatattttgcaaaattcatggacgaatttggctgattttttaaaattcaag 10569987  T
Q  147 gacgaatttgaggtattagtc 167  Q
    |||||||||||||||||||||    
T  10569988 gacgaatttgaggtattagtc 10570008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 13610808 - 13610690
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgc-cgatttttcaaaattcaag 146  Q
    ||||||||||||||||||| ||| | |   ||||| | ||||||||||||||||||| ||||||||||||| |||||||  |||||||||||||||||||    
T  13610808 acggagggactgatttgattgacattttgtaaatt-atggactaatttgatatttcgcaaaattcagggac-aaatttgatcgatttttcaaaattcaag 13610711  T
Q  147 gacgaatttgaggtattagtc 167  Q
    ||||||||| |||||||||||    
T  13610710 gacgaatttaaggtattagtc 13610690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 20 - 167
Target Start/End: Complemental strand, 6899632 - 6899485
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||  |||||||||  |||| |||| ||||||   ||||||||| |||||||||||| ||||||||| | ||||||||  |||||| || ||||    
T  6899632 acatcatcaacactaacggagcttttggacgaagggaccattttgatggatgtctgtaaaatttagggactaaatagatatttcacaaaatttagagacg 6899533  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    || ||  | ||||||| ||||||||||||| |||||||||||||||||    
T  6899532 aatttgactgatttttgaaaattcaaggacaaatttgaggtattagtc 6899485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 78 - 167
Target Start/End: Original strand, 9400035 - 9400124
Alignment:
Q  78 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    |||||| |||||||||| ||||||||| |||||||| ||| ||| ||  | |||||||||||||||||||||||||||||||||||||||    
T  9400035 aaattcggggactaattagatatttcgcaaaattcaaggatgaatttgactgatttttcaaaattcaaggacgaatttgaggtattagtc 9400124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 48 - 173
Target Start/End: Original strand, 11357164 - 11357289
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||  ||| | |   ||||||||||||||| ||| |||||   |||||||||||||||| ||  ||||||||| |||||||||||    
T  11357164 acggagggactgatttgaatgacattttgtaaattcagggactaaattgctatttttcaaaattcagggacgaatttgaccgattttttaaaattcaagg 11357263  T
Q  148 acgaatttgaggtattagtccttttt 173  Q
    |||||||||| ||||||||| |||||    
T  11357264 acgaatttgatgtattagtctttttt 11357289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 99 - 167
Target Start/End: Complemental strand, 32437208 - 32437140
Alignment:
Q  99 atttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||    
T  32437208 atttcgcaaaattcagggacgaaattggccgatttttcaaaattcaatgacaaatttgaggtattagtc 32437140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 48 - 179
Target Start/End: Original strand, 6902868 - 6902996
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||||||| | |   ||||||  ||||||| | |||||| || |||||| ||||||||| ||  | ||||||| |||||||||||    
T  6902868 acggagggactgatttgatggacattttgtaaattcgaggactaaatagatatt-cgcaaaatttagggacgaatttgactgatttttgaaaattcaagg 6902966  T
Q  148 acgaatttgaggtattagtcctttttataata 179  Q
    ||||||||||||||||||||  ||||||||||    
T  6902967 acgaatttgaggtattagtc--ttttataata 6902996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 20 - 114
Target Start/End: Complemental strand, 9398807 - 9398713
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcag 114  Q
    |||||||||| |||||||||  |||| |||||||||||   ||||||| |||||| ||||||||||||||||| | ||||||||| |||||||||    
T  9398807 acatcatcaccactaacggaacttttggacggagggaccattttgatgaacgtctataaaattcagggactaaatagatatttcgcaaaattcag 9398713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 98 - 167
Target Start/End: Complemental strand, 7371244 - 7371175
Alignment:
Q  98 tatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    ||||||| ||||||||||||| || || |||||||||| |||||||||||||||| ||||||||||||||    
T  7371244 tatttcgcaaaattcagggaccaatttggccgatttttgaaaattcaaggacgaagttgaggtattagtc 7371175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 20525304 - 20525432
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   ||||||| |||| || | | ||||| | |||||||||||| ||| ||  || |||||| ||||||||| |    
T  20525304 acggagggactgatttgattgacattttgtaaattcaaggacaaaatagctattttgcaaaattcagggatgaatttgacctatttttaaaaattcaaag 20525403  T
Q  148 acgaatttgaggtattagtcctttttata 176  Q
    |||||||||||||||||||| ||||||||    
T  20525404 acgaatttgaggtattagtcgtttttata 20525432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 106 - 167
Target Start/End: Original strand, 8605353 - 8605414
Alignment:
Q  106 aaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    |||||| ||||||||| || || ||||||| |||||||||||||||||||||||||||||||    
T  8605353 aaaatttagggacgaatttggctgatttttgaaaattcaaggacgaatttgaggtattagtc 8605414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 7049904 - 7049828
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttg 96  Q
    |||||||||| || ||||||  |||| |||||||||||   ||||||||||||||||||||||||||||| ||||||    
T  7049904 acatcatcaccacgaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggacgaatttg 7049828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 48 - 152
Target Start/End: Original strand, 14338480 - 14338584
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||   |||||||||||||||| |||||||||||  |||| || |||||| ||||||   ||||||| || || ||||||| |||||||||||    
T  14338480 acggagggaccattttgatggacgtctgtgaaattcagggatgaattagacatttcgcaaaatttgaggacgaatttggctgatttttaaaaattcaagg 14338579  T
Q  148 acgaa 152  Q
    |||||    
T  14338580 acgaa 14338584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 61 - 130
Target Start/End: Original strand, 3018450 - 3018519
Alignment:
Q  61 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 130  Q
    |||||||||||||||  ||||||||||||||| ||||||||||| | |||| ||||||||| || |||||    
T  3018450 tttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggacgaagttggccga 3018519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 48 - 164
Target Start/End: Complemental strand, 21068744 - 21068628
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   ||||||  ||||||| | ||||||||| ||||||   ||||||| ||  | |||| || |||||||||||    
T  21068744 acggagggactgatttgattgacattttgtaaattcgaggactaaatagatatttcgtaaaatttgtggacgaatttgactgattgttgaaaattcaagg 21068645  T
Q  148 acgaatttgaggtatta 164  Q
    |||||||||||||||||    
T  21068644 acgaatttgaggtatta 21068628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 31 - 130
Target Start/End: Original strand, 17952030 - 17952129
Alignment:
Q  31 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 130  Q
    |||||||||| |||| |||||||||||  | ||||||||||||    |||||||||||||| ||||||||||||  |||||  |||||||| || |||||    
T  17952030 actaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccga 17952129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 7049847 - 7049790
Alignment:
Q  106 aaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatt 163  Q
    |||||||||||||||| || || ||||||| |||||||||||| ||||||||| ||||    
T  7049847 aaaattcagggacgaatttggctgatttttgaaaattcaaggaagaatttgagatatt 7049790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 121
Target Start/End: Complemental strand, 2968245 - 2968185
Alignment:
Q  61 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 121  Q
    |||||||||||||||  ||||||||||| ||| ||||||||||| | |||| |||||||||    
T  2968245 tttgatggacgtctgataaattcagggattaaattgatatttcgcataattgagggacgaa 2968185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 164
Target Start/End: Complemental strand, 21091144 - 21091109
Alignment:
Q  129 gatttttcaaaattcaaggacgaatttgaggtatta 164  Q
    ||||||| ||||||||||||||||||||||||||||    
T  21091144 gatttttgaaaattcaaggacgaatttgaggtatta 21091109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 157
Target Start/End: Original strand, 35175862 - 35175977
Alignment:
Q  42 ttttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaat 141  Q
    |||| |||||||||||  | ||||||||||||    |||||||||||||| ||||||||||||  |||||  | |||||| || ||||||   | |||||    
T  35175862 ttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggagacgaatttggccgatccctgaaaat 35175961  T
Q  142 tcaaggacgaatttga 157  Q
    ||||||||||| ||||    
T  35175962 tcaaggacgaaattga 35175977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 173
Target Start/End: Original strand, 7051263 - 7051340
Alignment:
Q  96 gatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtccttttt 173  Q
    ||||||||| ||||||||| |||||| ||  | ||||||| |||||||||   ||||||| ||||||||||| |||||    
T  7051263 gatatttcgcaaaattcagagacgaatttgactgattttttaaaattcaaattcgaatttaaggtattagtcattttt 7051340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 110; Significance: 3e-55; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 20 - 173
Target Start/End: Original strand, 3152215 - 3152368
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||||| |||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  3152215 acatcatcactattaacggaccttttggacggagggacggatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggatg 3152314  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtccttttt 173  Q
    ||||| ||||||||||||||||| |||||  ||||||||||||||||| |||||    
T  3152315 aaattggccgatttttcaaaatttaaggataaatttgaggtattagtcgttttt 3152368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 20 - 167
Target Start/End: Complemental strand, 44794354 - 44794208
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||||| |||||||| |||| |||||||||||  ||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||| |    
T  44794354 acatcatcactattaacggaccttttggacggagggacgaatttgatggacttctgcaaaattcagggactaatttgatatttcgcaaaattcagggatg 44794255  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  44794254 aaattggccga-ttttcaaaattcaaggacgaatttgaggtattagtc 44794208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 2660359 - 2660218
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    ||||||||  || |||| ||| |||| |||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  2660359 acatcatcgttattaacagaccttttggacggagggacgaatttgatggacgtctgtaaaattcaaggactaatttgatatttcgcaaaattcagggacg 2660260  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggta 161  Q
    ||||| | ||||||||||||||||||||||||||||||||||    
T  2660259 aaattggtcgatttttcaaaattcaaggacgaatttgaggta 2660218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 23 - 167
Target Start/End: Original strand, 53190759 - 53190903
Alignment:
Q  23 tcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 122  Q
    ||||||| |||||||||  |||| |||||||||||   |||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||     
T  53190759 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaat 53190858  T
Q  123 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    || |||||||||| |||||||||||||||||||||||||||||||    
T  53190859 ttggccgattttttaaaattcaaggacgaatttgaggtattagtc 53190903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 46308926 - 46308807
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  46308926 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 46308827  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  46308826 acgaatttgaggtattagtc 46308807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 23 - 167
Target Start/End: Original strand, 27899081 - 27899225
Alignment:
Q  23 tcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 122  Q
    ||||||| |||||||||  |||| |||||||||||   ||| |||||||||||||||||||||||||||| | ||||||||| |||||||| |||||||     
T  27899081 tcatcaccactaacggagcttttggacggagggaccatttttatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgaat 27899180  T
Q  123 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    || |||||||||| |||||||||||||||||||||||||||||||    
T  27899181 ttggccgattttttaaaattcaaggacgaatttgaggtattagtc 27899225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 38193480 - 38193599
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||| ||||||||||||| ||| | |   ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  38193480 acggatggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 38193579  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  38193580 acgaatttgaggtattagtc 38193599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 53094243 - 53094362
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||| ||||||| ||| | |   ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  53094243 acggagggactcatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 53094342  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  53094343 acgaatttgaggtattagtc 53094362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 54900044 - 54900163
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   |||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  54900044 acggagggactgatttgattgacattttgtaaattcagggacaaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 54900143  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  54900144 acgaatttgaggtattagtc 54900163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 78 - 168
Target Start/End: Original strand, 41979352 - 41979442
Alignment:
Q  78 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 168  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  41979352 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtcc 41979442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 50 - 167
Target Start/End: Complemental strand, 3150369 - 3150252
Alignment:
Q  50 ggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggac 149  Q
    ||||||||||||||||| ||| | |   ||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  3150369 ggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggac 3150270  T
Q  150 gaatttgaggtattagtc 167  Q
    ||||||||||||||||||    
T  3150269 gaatttgaggtattagtc 3150252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 42 - 167
Target Start/End: Complemental strand, 41977875 - 41977750
Alignment:
Q  42 ttttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaat 141  Q
    |||| |||||||||||   ||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||| | || |||||||||| |||||    
T  41977875 ttttggacggagggaccattttgacggacgtctgtaaaattcagggactaatttgatatttcgccaaattcagggacgtatttggccgattttttaaaat 41977776  T
Q  142 tcaaggacgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||||||||    
T  41977775 tcaaggacgaatttgaggtattagtc 41977750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 23 - 167
Target Start/End: Original strand, 2226152 - 2226296
Alignment:
Q  23 tcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 122  Q
    ||||||| |||||| ||  |||| ||||||||||    ||||||| |||||||||||||||||||||||| | ||||||||| ||||||||||||||||     
T  2226152 tcatcaccactaacagagtttttggacggagggaacattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaat 2226251  T
Q  123 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    || |||||||||| |||||||||||||||||||||||||||||||    
T  2226252 ttggccgattttttaaaattcaaggacgaatttgaggtattagtc 2226296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 20 - 124
Target Start/End: Original strand, 19987591 - 19987695
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    ||||||||||||||||| ||| |||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||    
T  19987591 acatcatcactactaacagaccttttggacggagggactgatttgatggacgtgtgtaaaatttagggactaatttgatatttcgcaaaattcagggacg 19987690  T
Q  120 aaatt 124  Q
    |||||    
T  19987691 aaatt 19987695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 20 - 167
Target Start/End: Complemental strand, 21348870 - 21348723
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||| ||||| |||||| ||  |||| |||||||||||   |||||||||||||||||||||||||||||||| | ||||||||| |||||||| |||||    
T  21348870 acattatcaccactaacagagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacg 21348771  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    || || |||||||||| ||||||||||||| |||||||||||||||||    
T  21348770 aatttggccgattttttaaaattcaaggacaaatttgaggtattagtc 21348723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 38192014 - 38191895
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||| ||||    
T  38192014 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccaatttttcaaaatttaagg 38191915  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  38191914 acgaatttgaggtattagtc 38191895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 53187861 - 53187742
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||    
T  53187861 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaagg 53187762  T
Q  148 acgaatttgaggtattagtc 167  Q
    || |||||||||||||||||    
T  53187761 acaaatttgaggtattagtc 53187742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 31 - 167
Target Start/End: Complemental strand, 54898573 - 54898437
Alignment:
Q  31 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 130  Q
    |||||||||  |||| ||||||| |||   ||||||| |||||||||||||||||||||||| | ||||||||| |||||||||||||||| ||  ||||    
T  54898573 actaacggagcttttggacggagagaccattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccga 54898474  T
Q  131 tttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    ||||| |||||||||||||||||||||||||||||||    
T  54898473 ttttttaaaattcaaggacgaatttgaggtattagtc 54898437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 46310406 - 46310525
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    |||||||||||| |||||| ||| | |   ||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||| |    
T  46310406 acggagggactggtttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaag 46310505  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  46310506 acgaatttgaggtattagtc 46310525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 46611273 - 46611392
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||||||||||||||| |||||||||||||||||||  |  ||||||||||||||||||    
T  46611273 acggagggactgatttgattgacattttataaattcagggactaatttgatatttcgcaaaattcagggacgaaattgacaaatttttcaaaattcaagg 46611372  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  46611373 acgaatttgaggtattagtc 46611392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 20 - 167
Target Start/End: Complemental strand, 51684757 - 51684610
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||| |||||||||  |||| |||||||||||   |||||||||||||||||||||||| ||||||| | ||||||| | |||||||||||| |    
T  51684757 acatcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcaaggactaaatagatattttgcaaaattcagggatg 51684658  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    || || || ||||||| |||||||||||||||||||||| ||||||||    
T  51684657 aatttggctgatttttgaaaattcaaggacgaatttgagatattagtc 51684610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 78 - 167
Target Start/End: Original strand, 44795890 - 44795979
Alignment:
Q  78 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    ||||||| ||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  44795890 aaattcatggactaatttgatatttcgcaaaattcaggaacgaaattagccgatttttcaaaattcaaggacgaatttgaggtattagtc 44795979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 20 - 168
Target Start/End: Original strand, 30599915 - 30600063
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||| |||||| ||  |||| |||||||||||   |||||| ||||||| ||||||||||||||||| | ||||||||| |||||||||||||     
T  30599915 acatcatcaccactaacagagcttttggacggagggaccattttgatcgacgtctctaaaattcagggactaaatagatatttcgcaaaattcagggaca 30600014  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 168  Q
    || || |||||||| | |||||| |||||||||||||||||||||||||    
T  30600015 aatttggccgatttgtaaaaatttaaggacgaatttgaggtattagtcc 30600063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 20 - 167
Target Start/End: Complemental strand, 17515457 - 17515310
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||| ||||||||  ||||| ||| |||||||   |||||||||||| ||||||||||||||||||| | ||||||||| ||||||||| || |    
T  17515457 acatcatcaccactaacggtgattttggacagagggaccattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcagcgatg 17515358  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    || || ||| |||||| |||||||||||| ||||||||||||||||||    
T  17515357 aatttggccaatttttaaaaattcaaggaagaatttgaggtattagtc 17515310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 20 - 167
Target Start/End: Original strand, 23293167 - 23293314
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||| |||||||||  |||| ||||||||||||  |||||||||||| ||||||||||| ||||||| | ||||||||| |||||||| || ||    
T  23293167 acatcatcaccactaacggagcttttggacggagggactattttgatggacgtttgtaaaattcatggactaaatagatatttcgcaaaattcaagggcg 23293266  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    || || || |||||||| ||||||||| || |||||||||||||||||    
T  23293267 aatttggctgatttttcgaaattcaagaacaaatttgaggtattagtc 23293314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 52 - 167
Target Start/End: Complemental strand, 46609264 - 46609149
Alignment:
Q  52 agggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacga 151  Q
    ||||||||||||||| ||| | |   ||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||| ||||    
T  46609264 agggactgatttgattgacattttgtaaattcagggactaatttgatatttcacaaaattcagggacgaaattggccgatttttcaaaattcaagaacga 46609165  T
Q  152 atttgaggtattagtc 167  Q
    ||||||| ||||||||    
T  46609164 atttgagatattagtc 46609149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 53092742 - 53092623
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   ||||||||||| ||||||||||||||| ||||||||||||||||||| ||| ||||||||||||| || |    
T  53092742 acggagggactgatttgattgacattttataaattcagggattaatttgatatttcgcaaaattcagggacgaaattggccaatttttcaaaatttaaag 53092643  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  53092642 acgaatttgaggtattagtc 53092623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 20 - 165
Target Start/End: Complemental strand, 43765284 - 43765139
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||| |||||||||  |||| || ||||||||   |||||||||||||||||||||||||  ||||| | ||||||||| ||||||| || |||    
T  43765284 acatcatcaccactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcagaaactaaatagatatttcgcaaaattccggaacg 43765185  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattag 165  Q
    || ||  ||||||||| |||||||||||||||||||||||||||||    
T  43765184 aatttgaccgatttttgaaaattcaaggacgaatttgaggtattag 43765139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 50 - 162
Target Start/End: Original strand, 2661880 - 2661992
Alignment:
Q  50 ggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggac 149  Q
    ||||||||||||||||| ||| | |   ||||||| ||||||||||||||||||| |||||||| |||||||||| | ||||||||||||||||||||||    
T  2661880 ggagggactgatttgattgacattttgtaaattcatggactaatttgatatttcgcaaaattcacggacgaaattggtcgatttttcaaaattcaaggac 2661979  T
Q  150 gaatttgaggtat 162  Q
    |||||||||||||    
T  2661980 gaatttgaggtat 2661992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 28626530 - 28626411
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||| ||||||| ||| | |   |||||||||||||| |||||||||||||| |||||||||||||||||  |||||||||||||||||||||    
T  28626530 acggagggactaatttgattgacattttgtaaattcagggactattttgatatttcgaataattcagggacgaaattgaccgatttttcaaaattcaagg 28626431  T
Q  148 acgaatttgaggtattagtc 167  Q
    || | |||||||||||||||    
T  28626430 actattttgaggtattagtc 28626411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 78 - 173
Target Start/End: Complemental strand, 35903914 - 35903819
Alignment:
Q  78 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtccttttt 173  Q
    ||||||||||||||||||||||||| | |||||||||||| |||||| || ||||||||||||||||||||| ||||||||||||||||| |||||    
T  35903914 aaattcagggactaatttgatattttgcaaaattcagggatgaaattggctgatttttcaaaattcaaggacaaatttgaggtattagtcgttttt 35903819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 7883447 - 7883328
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||  | |   ||||||||| ||||||||||||||||  |||||| |||||||||||| |||||||||||||||||||| |    
T  7883447 acggagggactgatttgattgaaattttgtaaattcaggaactaatttgatatttcacaaaatttagggacgaaattggccgatttttcaaaattcaaag 7883348  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||| ||||||||||||||    
T  7883347 acgaaattgaggtattagtc 7883328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 23291689 - 23291570
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   |||||||| |||||| | ||||||||| |||||||||||||||| || |||||||||| |||||||||||    
T  23291689 acggagggactgatttgattgacattttgtaaattcagagactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaagg 23291590  T
Q  148 acgaatttgaggtattagtc 167  Q
    |||||||| |||||||||||    
T  23291589 acgaatttaaggtattagtc 23291570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 23 - 154
Target Start/End: Original strand, 35905712 - 35905843
Alignment:
Q  23 tcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 122  Q
    ||||||| |||| ||||  |||| |||||||||||   ||||||| |||||||||||||||||||||||| | ||||||||| ||||||||||||||||     
T  35905712 tcatcaccactaccggagcttttggacggagggaccattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaat 35905811  T
Q  123 tttgccgatttttcaaaattcaaggacgaatt 154  Q
    ||  ||||||||| |||||||||||| |||||    
T  35905812 ttgaccgattttttaaaattcaaggatgaatt 35905843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 46112606 - 46112487
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||   |||||||||||||||||||||||| ||||||| | ||||||| | ||||||||   ||||| || |||||||||| |||||||||||    
T  46112606 acggagggaccattttgatggacgtctgtaaaattcatggactaaatagatattttgcaaaattcaataacgaatttggccgattttttaaaattcaagg 46112507  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  46112506 acgaatttgaggtattagtc 46112487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 42279654 - 42279510
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||| |||||| ||  |||| |||||||||||   |||||| ||||||||||||||||||||||||| | ||||||| | ||||||| | ||||    
T  42279654 acatcatcaccactaacagagcttttggacggagggaccattttgatagacgtctgtaaaattcagggactaaatagatattttgcaaaattctgagacg 42279555  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 164  Q
    || |  || ||||||| ||||||||| ||||||||||||||||||    
T  42279554 aattgagctgatttttgaaaattcaatgacgaatttgaggtatta 42279510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 611192 - 611311
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||| ||||||| ||| | |   |||||||||| |||| | | |||||||||||||||||||||||| || || ||||||| |||||||||||    
T  611192 acggagggactaatttgattgacattttgtaaattcaggggctaaatagctatttcgaaaaattcagggacgaatttggctgattttttaaaattcaagg 611291  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  611292 acgaatttgaggtattagtc 611311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 48 - 166
Target Start/End: Original strand, 2378953 - 2379071
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   ||||||| ||||||| | | ||||| | |||||||||||||||||||  ||||||||| |||||||||||    
T  2378953 acggagggactgatttgattgacattttgtaaattcaaggactaaatagctattttgcaaaattcagggacgaaattgaccgattttttaaaattcaagg 2379052  T
Q  148 acgaatttgaggtattagt 166  Q
    |||||||||||||||||||    
T  2379053 acgaatttgaggtattagt 2379071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 23 - 164
Target Start/End: Complemental strand, 2377173 - 2377032
Alignment:
Q  23 tcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 122  Q
    ||||||| |||||||||  ||||||||||||| ||   ||||||||||||||||||||||||| |||||| |  || ||| | ||||||||||||||||     
T  2377173 tcatcaccactaacggagcttttagacggaggaaccattttgatggacgtctgtaaaattcagagactaaatatattttttgcaaaattcagggacgaat 2377074  T
Q  123 tttgccgatttttcaaaattcaaggacgaatttgaggtatta 164  Q
    || | | |||||| |||||||||  |||||||||||||||||    
T  2377073 ttggtcaatttttgaaaattcaaaaacgaatttgaggtatta 2377032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 48 - 172
Target Start/End: Complemental strand, 44268100 - 44267976
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   ||||||| |||| || | | ||||||| ||||||||| || ||| || |||||||||| |||||||||||    
T  44268100 acggagggactgatttgattgacattttataaattcaaggacaaaatagctatttcgcaaaattcagagatgaatttggccgatttttgaaaattcaagg 44268001  T
Q  148 acgaatttgaggtattagtcctttt 172  Q
    |||||||||||||||||||| ||||    
T  44268000 acgaatttgaggtattagtcatttt 44267976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 51 - 157
Target Start/End: Complemental strand, 23774268 - 23774162
Alignment:
Q  51 gagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacg 150  Q
    ||||||||  |||||||||||||||  ||||||||||||||| ||||||||||| | |||| ||||||||| || ||||| |  | ||||||||||||||    
T  23774268 gagggacttttttgatggacgtctgacaaattcagggactaaattgatatttcgcataattgagggacgaatttggccgactcgtgaaaattcaaggacg 23774169  T
Q  151 aatttga 157  Q
    |||||||    
T  23774168 aatttga 23774162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 30598456 - 30598337
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttg-ccgatttttcaaaattcaag 146  Q
    ||||||||||| ||||||| ||| | |   ||||||| |||| || | | ||||||| ||||||||||||| ||||||| ||||||||| ||||||||||    
T  30598456 acggagggactaatttgattgacattttgtaaattcaaggacaaaatagctatttcgcaaaattcagggac-aaatttgaccgatttttgaaaattcaag 30598358  T
Q  147 gacgaatttgaggtattagtc 167  Q
    |||||||||||||||||||||    
T  30598357 gacgaatttgaggtattagtc 30598337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 106 - 167
Target Start/End: Original strand, 7884927 - 7884988
Alignment:
Q  106 aaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    |||||||||||||| | || |||||||||| |||||||||||||||||||||||||||||||    
T  7884927 aaaattcagggacgtatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 7884988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 48 - 164
Target Start/End: Original strand, 42282443 - 42282559
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    |||||||||||||||| ||| || | |   ||||||| ||||||| | ||||||||| |||||||||  ||||| ||  | ||||||| |||||||||||    
T  42282443 acggagggactgatttaatgaacattttgtaaattcaaggactaaatagatatttcgcaaaattcagaaacgaatttgactgatttttgaaaattcaagg 42282542  T
Q  148 acgaatttgaggtatta 164  Q
    |||||||||||||||||    
T  42282543 acgaatttgaggtatta 42282559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 51 - 167
Target Start/End: Original strand, 51686367 - 51686483
Alignment:
Q  51 gagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacg 150  Q
    ||||||||||||||||| || | |   ||||||  ||||||| |  |||||||| |||||| ||||||||| || || ||||||| |||||| |||||||    
T  51686367 gagggactgatttgatgaacattttgtaaattcgaggactaaataaatatttcgcaaaatttagggacgaatttggctgatttttgaaaatttaaggacg 51686466  T
Q  151 aatttgaggtattagtc 167  Q
    |||||||||||||||||    
T  51686467 aatttgaggtattagtc 51686483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 51 - 168
Target Start/End: Complemental strand, 48829472 - 48829355
Alignment:
Q  51 gagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacg 150  Q
    |||||||||||||||||||| | |   |||| |  ||||||| | ||||||||| |||||||||| |  || || || || |||| ||||||||||||||    
T  48829472 gagggactgatttgatggacattttgtaaatccgaggactaaatagatatttcgcaaaattcaggaataaatttggctgaattttgaaaattcaaggacg 48829373  T
Q  151 aatttgaggtattagtcc 168  Q
    ||||||||||||||||||    
T  48829372 aatttgaggtattagtcc 48829355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 7884873 - 7884939
Alignment:
Q  23 tcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggac 89  Q
    ||||||| |||||||||  |||| |||||||||||   |||||||||||||||||||||||||||||    
T  7884873 tcatcaccactaacggaacttttggacggagggaccattttgatggacgtctgtaaaattcagggac 7884939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 47 - 157
Target Start/End: Original strand, 23888776 - 23888886
Alignment:
Q  47 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 146  Q
    |||||||||||   |||||||||||| ||  |||||||||||||||  |||||||||| | |||| ||||||||| || |||||  | | |||||||| |    
T  23888776 gacggagggacctttttgatggacgtttgacaaattcagggactaagctgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagg 23888875  T
Q  147 gacgaatttga 157  Q
    |||||||||||    
T  23888876 gacgaatttga 23888886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 47 - 157
Target Start/End: Original strand, 40508915 - 40509025
Alignment:
Q  47 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 146  Q
    |||||||||||   |||||||||||||||  ||||||| ||| ||| ||||||||||| | |||| ||||||||| || |||||    | ||||||||||    
T  40508915 gacggagggacatttttgatggacgtctgacaaattcaaggattaagttgatatttcgcataattgagggacgaatttggccgacccgtgaaaattcaag 40509014  T
Q  147 gacgaatttga 157  Q
    |||||||||||    
T  40509015 gacgaatttga 40509025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 47 - 157
Target Start/End: Complemental strand, 48633997 - 48633887
Alignment:
Q  47 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 146  Q
    |||||||||||   |||||||||||||||  ||||||||||||||| ||||||||||| | |||| | ||||||| ||  ||||    | ||||||||||    
T  48633997 gacggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgatggacgaatttgaccgacccgtgaaaattcaag 48633898  T
Q  147 gacgaatttga 157  Q
    |||||||||||    
T  48633897 gacgaatttga 48633887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 50 - 164
Target Start/End: Original strand, 54412519 - 54412633
Alignment:
Q  50 ggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggac 149  Q
    ||||||||||||||||| ||| | |   ||||||||| ||||| | ||||| ||| |||||||| ||||||| ||  || |||||| |||||||| ||||    
T  54412519 ggagggactgatttgattgacattttgtaaattcaggaactaaatagatatctcgcaaaattcaaggacgaatttgaccaattttttaaaattcacggac 54412618  T
Q  150 gaatttgaggtatta 164  Q
    ||||||||| |||||    
T  54412619 gaatttgagatatta 54412633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 46197867 - 46197766
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||  |||||||||  |||| |||| ||||||   ||| |||||||||||||||||||||| ||||| | ||||||| | ||||||||| ||||    
T  46197867 acatcatcatcactaacggaacttttggacgaagggaccattttaatggacgtctgtaaaattcaggaactaaatagatattttgcaaaattcagagacg 46197768  T
Q  120 aa 121  Q
    ||    
T  46197767 aa 46197766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 2977347 - 2977443
Alignment:
Q  61 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttga 157  Q
    |||||||||||| ||  ||||| ||||||| | ||||||||||| | |||| ||||| ||| || |||||||  | |||||||||||||||||||||    
T  2977347 tttgatggacgtatgacaaatttagggactgaattgatatttcgcataattaagggatgaatttggccgattcgtaaaaattcaaggacgaatttga 2977443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 47 - 111
Target Start/End: Original strand, 25535253 - 25535317
Alignment:
Q  47 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaatt 111  Q
    ||||||||||   ||||| ||||||||||| ||||||||||||||| || |||||||||||||||    
T  25535253 gacggagggatgaatttggtggacgtctgttaaattcagggactaacttaatatttcgaaaaatt 25535317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 21350575 - 21350694
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   ||||||| |||| || | | ||||||| |||||||||  ||||| || |||||||||  |||| ||| ||    
T  21350575 acggagggactgatttgattgacattttgtaaattcaaggacaaaatagctatttcgcaaaattcagtaacgaatttggccgattttaaaaaaatcacgg 21350674  T
Q  148 acgaatttgaggtattagtc 167  Q
    | ||||||||||||||||||    
T  21350675 atgaatttgaggtattagtc 21350694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 109
Target Start/End: Original strand, 23876982 - 23877044
Alignment:
Q  47 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaa 109  Q
    ||||||||||   ||||||||||||| ||| |||||||| ||||||||||||||||| |||||    
T  23876982 gacggagggatgaatttgatggacgtttgttaaattcagagactaatttgatatttcaaaaaa 23877044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 157
Target Start/End: Original strand, 45898352 - 45898462
Alignment:
Q  47 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 146  Q
    |||||||||||   |||||| ||||||||  ||||||| ||||||| ||||||||||| | ||||||||||| || || | |||  | | |||||||| |    
T  45898352 gacggagggacctttttgatagacgtctgacaaattcaaggactaagttgatatttcgcataattcagggacaaagttggtcgacgtgtgaaaattcagg 45898451  T
Q  147 gacgaatttga 157  Q
    |||||||||||    
T  45898452 gacgaatttga 45898462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 48 - 157
Target Start/End: Original strand, 17516943 - 17517052
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   ||||||| |||| || |   ||||||| |||||||| | ||||| ||  ||||||||| |||||||||||    
T  17516943 acggagggactgatttgattgacattttgtaaattcaaggacaaaataactatttcgcaaaattcatgaacgaatttgaccgatttttgaaaattcaagg 17517042  T
Q  148 acgaatttga 157  Q
    ||||||||||    
T  17517043 acgaatttga 17517052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 48830803 - 48830896
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattca 113  Q
    |||||||||| |||||| ||  |||| |||||||||||   ||||||||||||| ||||||||||  |||||| | |||||||||  |||||||    
T  48830803 acatcatcaccactaacagagcttttggacggagggaccattttgatggacgtccgtaaaattcaaagactaaatagatatttcgttaaattca 48830896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 87 - 167
Target Start/End: Complemental strand, 600805 - 600725
Alignment:
Q  87 gactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    |||||| | ||||||| | |||||||| | || || || | |||||||| |||||||||||| ||||||||||||||||||    
T  600805 gactaaatagatattttgtaaaattcatgaacaaatttggtcgattttttaaaattcaaggatgaatttgaggtattagtc 600725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 44276193 - 44276265
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaa 92  Q
    |||||||||| |||||| ||  |||| |||||||||||   |||||||| ||||||||||||||| |||||||    
T  44276193 acatcatcaccactaacagagcttttggacggagggaccattttgatgggcgtctgtaaaattcaaggactaa 44276265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 46114075 - 46114195
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttc-aaaattcaag 146  Q
    |||||| |||||||||||| ||| | |   |||||||  |||||| | ||||||||| |||||||| |||| || || ||||||||||  ||||||||||    
T  46114075 acggagtgactgatttgattgacattttgtaaattcaatgactaaatagatatttcgcaaaattcaaggacaaatttggccgatttttttaaaattcaag 46114174  T
Q  147 gacgaatttgaggtattagtc 167  Q
    ||  ||||||||||| |||||    
T  46114175 gataaatttgaggtagtagtc 46114195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 47 - 117
Target Start/End: Original strand, 33113184 - 33113254
Alignment:
Q  47 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcaggga 117  Q
    |||||||||||   |||||||||||||||  ||||| ||||||||| ||||||||||| | |||| |||||    
T  33113184 gacggagggacctttttgatggacgtctgacaaatttagggactaagttgatatttcgcataattgaggga 33113254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 77 - 157
Target Start/End: Complemental strand, 41944666 - 41944586
Alignment:
Q  77 aaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttga 157  Q
    ||||||||||||||| ||||||||||||  |||||  |||||||| || ||||||   | |||||||| ||||||| ||||    
T  41944666 aaaattcagggactattttgatatttcgttaaattgggggacgaatttggccgatccctgaaaattcagggacgaaattga 41944586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 108; Significance: 5e-54; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 20 - 167
Target Start/End: Original strand, 6785978 - 6786125
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||||  |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||    
T  6785978 acatcatcactgttaacagacattttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcaaataattaagggacg 6786077  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    ||||| |||||||||||||||||||||||| | |||||||||||||||    
T  6786078 aaattggccgatttttcaaaattcaaggactattttgaggtattagtc 6786125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 20 - 167
Target Start/End: Complemental strand, 37020655 - 37020508
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||     
T  37020655 acatcatcactattaacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcaaaaaattcaaggaca 37020556  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    |||||  ||||||||||||||||||||||| | |||||||||||||||    
T  37020555 aaattgaccgatttttcaaaattcaaggactattttgaggtattagtc 37020508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 42 - 167
Target Start/End: Original strand, 24208061 - 24208186
Alignment:
Q  42 ttttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaat 141  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  24208061 ttttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaataattcagggacgaaattggccgatttttcaaaat 24208160  T
Q  142 tcaaggacgaatttgaggtattagtc 167  Q
    |||||||  | |||||||||||||||    
T  24208161 tcaaggagtattttgaggtattagtc 24208186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 20 - 173
Target Start/End: Original strand, 39664745 - 39664898
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||| |||||||||  |||| |||||||||||   |||||||||||||||||||||||||||||||| | ||||||||| ||||||| ||||||    
T  39664745 acatcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgtaaaattcggggacg 39664844  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtccttttt 173  Q
    || || |||||||||| ||||||||||||||||||||||||||||||| |||||    
T  39664845 aatttggccgattttttaaaattcaaggacgaatttgaggtattagtcattttt 39664898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 31 - 167
Target Start/End: Complemental strand, 16763212 - 16763076
Alignment:
Q  31 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 130  Q
    |||||| || ||||| |||||||||||   |||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||| ||  ||||    
T  16763212 actaacagagattttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccga 16763113  T
Q  131 tttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    ||||| |||||||||||||||||||||||||||||||    
T  16763112 tttttaaaaattcaaggacgaatttgaggtattagtc 16763076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 48 - 172
Target Start/End: Complemental strand, 24205717 - 24205593
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||| ||||||| ||| | |   ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  24205717 acggagggactaatttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaagg 24205618  T
Q  148 acgaatttgaggtattagtcctttt 172  Q
    || | ||||||||||||||||||||    
T  24205617 actattttgaggtattagtcctttt 24205593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 14387468 - 14387349
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||| ||||||| ||| | |   ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  14387468 acggagggacttatttgattgacattttgtaaattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaagg 14387369  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  14387368 acgaatttgaggtattagtc 14387349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 20 - 167
Target Start/End: Complemental strand, 40560370 - 40560223
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||| |||||| ||  |||| ||||||||||||  |||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||    
T  40560370 acatcatcaccactaacagaacttttggacggagggactattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacg 40560271  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    || || || ||||||| ||||||||| ||||||||||| |||||||||    
T  40560270 aatttggctgattttttaaaattcaaagacgaatttgaagtattagtc 40560223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 20 - 167
Target Start/End: Original strand, 14389081 - 14389228
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||||||||||| |  |||| |||||||||||   |||||||||| | || |||||||||||||||| | ||||||||| ||||||||||||||    
T  14389081 acatcatcactactaacgaaacttttggacggagggaccattttgatggacatttggaaaattcagggactaaatagatatttcgcaaaattcagggacg 14389180  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    || || |||||||||| ||||||||| |||||||||||||||||||||    
T  14389181 aatttggccgatttttgaaaattcaatgacgaatttgaggtattagtc 14389228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 16764581 - 16764700
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    |||||||||||| |||||| ||| | |   ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||    
T  16764581 acggagggactggtttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttctcaaaattcaagg 16764680  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  16764681 acgaatttgaggtattagtc 16764700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 44709744 - 44709889
Alignment:
Q  22 atcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 121  Q
    |||||||| ||||||| |  |||| |||||||||||   |||||||||||||||||||||||||||||||| | | ||||||| ||||||||||| ||||    
T  44709744 atcatcaccactaacgaagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagttatttcgcaaaattcagggccgaa 44709843  T
Q  122 atttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
     || |||| ||||| |||||||||||||||||||||||||||||||    
T  44709844 tttggccggttttttaaaattcaaggacgaatttgaggtattagtc 44709889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 37022155 - 37022274
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||| ||||||| ||| | |   ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  37022155 acggagggactaatttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcagggacgaaattggtcgatttttcaaaattcaagg 37022254  T
Q  148 acgaatttgaggtattagtc 167  Q
    || | |||||||||||||||    
T  37022255 actattttgaggtattagtc 37022274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 48 - 173
Target Start/End: Original strand, 2577450 - 2577575
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||| ||||||| ||| | |   |||||||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||    
T  2577450 acggagggactaatttgattgacattttgtaaattcagggactaatttgatatttcaaaaaattcagggacgaaattggacgatttttcaaaattcaagg 2577549  T
Q  148 acgaatttgaggtattagtccttttt 173  Q
    || | ||||||||||||||| |||||    
T  2577550 actattttgaggtattagtcattttt 2577575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 23 - 167
Target Start/End: Original strand, 19908246 - 19908391
Alignment:
Q  23 tcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 122  Q
    ||||||| |||||||||  |||| |||||||||||   ||||| |||||||||||||||||| ||||||| | ||||||||| ||||||||||||| ||     
T  19908246 tcatcaccactaacggagcttttggacggagggaccattttgacggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattcagggactaat 19908345  T
Q  123 tttgccga-tttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    || ||||| ||||| |||||||||||||||||||||||||||||||    
T  19908346 ttggccgatttttttaaaattcaaggacgaatttgaggtattagtc 19908391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 20 - 172
Target Start/End: Complemental strand, 2767081 - 2766929
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||| |||||||||  |||| ||| |||||||   |||||| ||||||||||||||||||||||||| | ||||||||| |||||||| |||||    
T  2767081 acatcatcaccactaacggagcttttggacagagggaccattttgatagacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacg 2766982  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcctttt 172  Q
    |  ||  ||||||||| |||||||||||||||||||||| |||||||| ||||    
T  2766981 agtttgaccgatttttaaaaattcaaggacgaatttgagctattagtcatttt 2766929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 17696353 - 17696209
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||||| |||||||||  |||| ||||||| |||   |||||| ||||| ||||||||||||||||||| | |||||||   |||||||||||| |    
T  17696353 acatcatcaccactaacggagcttttggacggagtgaccattttgattgacgtttgtaaaattcagggactaaatagatattttccaaaattcagggatg 17696254  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 164  Q
    || || |||||||||| ||||||||||||||||||||||||||||    
T  17696253 aatttggccgatttttgaaaattcaaggacgaatttgaggtatta 17696209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 40561848 - 40561967
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    |||||||||| |||||||| ||| | |   ||||||||||||||||||| ||||||  ||||||||| ||||||||| |||||||||||||||||||| |    
T  40561848 acggagggaccgatttgattgacattttgtaaattcagggactaatttgctatttcacaaaattcagagacgaaattggccgatttttcaaaattcaaag 40561947  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  40561948 acgaatttgaggtattagtc 40561967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 78 - 167
Target Start/End: Complemental strand, 6783453 - 6783364
Alignment:
Q  78 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||  ||||||||| ||||||||||||| | |||||||||||||||    
T  6783453 aaattcagggactaatttgatattttgaataattcagggacgaaattgaccgattttttaaaattcaaggactattttgaggtattagtc 6783364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 20 - 163
Target Start/End: Original strand, 42519202 - 42519346
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcg-aaaaattcagggac 118  Q
    |||||||||| |||||||||  |||| || ||||||||   |||||||||||||||||||||||||||||||| | ||||||| | ||||||||| ||||    
T  42519202 acatcatcaccactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaaattcaaggac 42519301  T
Q  119 gaaatttgccgatttttcaaaattcaaggacgaatttgaggtatt 163  Q
     || ||   | |||||| |||||||||||||||||||||||||||    
T  42519302 taatttgatcaattttttaaaattcaaggacgaatttgaggtatt 42519346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 48 - 168
Target Start/End: Complemental strand, 39663273 - 39663153
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||| | | ||||| | |||||||||||||||| ||  ||||||||| |||||||||||    
T  39663273 acggagggactgatttgattgacattttgtaaattcagggactaaatagctattttgcaaaattcagggacgaatttgaccgatttttaaaaattcaagg 39663174  T
Q  148 acgaatttgaggtattagtcc 168  Q
    |||||||| ||||||||||||    
T  39663173 acgaattttaggtattagtcc 39663153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 16376855 - 16376736
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||  | |   ||||||||||||||| | | ||||||| |||||||||||||||| ||  ||||||||| ||||||||| |    
T  16376855 acggagggactgatttgattgatattttgtaaattcagggactaaatagctatttcgtaaaattcagggacgaatttgaccgattttttaaaattcaaag 16376756  T
Q  148 acgaatttgaggtattagtc 167  Q
    ||||||||||||||||||||    
T  16376755 acgaatttgaggtattagtc 16376736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 55 - 167
Target Start/End: Complemental strand, 19581526 - 19581414
Alignment:
Q  55 gactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatt 154  Q
    |||||||||||||||| | ||  ||||||  ||||||| | ||||||||| ||||||||||||| || || || ||||||| |||||| |||||||||||    
T  19581526 gactgatttgatggacatttggtaaattcgaggactaaatagatatttcgcaaaattcagggacaaatttggctgatttttaaaaatttaaggacgaatt 19581427  T
Q  155 tgaggtattagtc 167  Q
    |||||||||||||    
T  19581426 tgaggtattagtc 19581414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 48 - 164
Target Start/End: Complemental strand, 19906801 - 19906685
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||| ||| | |   |||||  |||||||| | ||||||||| |||||||||||||||| ||  ||||||||| |||||||||||    
T  19906801 acggagggactgatttgattgacattttgtaaattatgggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaagg 19906702  T
Q  148 acgaatttgaggtatta 164  Q
    |||||||| ||||||||    
T  19906701 acgaatttaaggtatta 19906685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 61 - 168
Target Start/End: Complemental strand, 6797613 - 6797506
Alignment:
Q  61 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggt 160  Q
    |||||| ||||||||||||||| ||||||||| | ||||||||| |||||||||| ||||| || ||| |||||| |||||||||  | |||||| ||||    
T  6797613 tttgatagacgtctgtaaaattaagggactaaatagatatttcgcaaaattcaggaacgaatttagccaattttttaaaattcaaatatgaatttaaggt 6797514  T
Q  161 attagtcc 168  Q
    ||||||||    
T  6797513 attagtcc 6797506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 167
Target Start/End: Complemental strand, 39455316 - 39455169
Alignment:
Q  20 acatcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 119  Q
    |||||||| | |||||||||  ||||  |||||| |||   |||||||||||||||||||||||| ||||||| | ||||||| | ||||||||||   |    
T  39455316 acatcatcgccactaacggagcttttgaacggagagaccattttgatggacgtctgtaaaattcatggactaaatagatattttgcaaaattcaggactg 39455217  T
Q  120 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    || ||  ||||||||| ||||||||||||| |||||||| ||||||||    
T  39455216 aatttaaccgattttttaaaattcaaggacaaatttgagatattagtc 39455169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 98 - 168
Target Start/End: Complemental strand, 34400383 - 34400313
Alignment:
Q  98 tatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 168  Q
    ||||||| |||||||||||| ||| || |||||||||| |||||||||||| |||||||||||||||||||    
T  34400383 tatttcgcaaaattcagggatgaatttggccgatttttgaaaattcaaggatgaatttgaggtattagtcc 34400313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 23 - 118
Target Start/End: Original strand, 16377197 - 16377292
Alignment:
Q  23 tcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggac 118  Q
    ||||||| |||||||||  |||| |||||||||||   |||||||||||| ||||||||||| ||||||| | ||||||| | |||||||||||||    
T  16377197 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtatgtaaaattcaaggactaaatagatattttgcaaaattcagggac 16377292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 48 - 173
Target Start/End: Original strand, 39456750 - 39456875
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||| ||||||||||||| ||| | |   ||||||||||||||| | | ||||| | |||||||| ||||||| ||  || |||||| |||||||||||    
T  39456750 acggatggactgatttgattgacattttataaattcagggactaaatagctattttgcaaaattcatggacgaatttaaccaattttttaaaattcaagg 39456849  T
Q  148 acgaatttgaggtattagtccttttt 173  Q
    | |||||||| ||||||||| |||||    
T  39456850 atgaatttgaagtattagtcgttttt 39456875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 31 - 130
Target Start/End: Original strand, 11023001 - 11023100
Alignment:
Q  31 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 130  Q
    |||||||||| |||| ||||||||||| || ||||||||||||    |||||||||||||| ||||||||||||  |||||  |||||||| || |||||    
T  11023001 actaacggaccttttggacggagggacggaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaattgggggacgaatttggccga 11023100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 126 - 167
Target Start/End: Complemental strand, 42517599 - 42517558
Alignment:
Q  126 gccgatttttcaaaattcaaggacgaatttgaggtattagtc 167  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  42517599 gccgatttttaaaaattcaaggacgaatttgaggtattagtc 42517558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 153
Target Start/End: Complemental strand, 37417379 - 37417287
Alignment:
Q  61 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaat 153  Q
    |||||||||||||||  ||||||||||||||| ||||||||||| | |||| ||||| ||| || |||||    | |||||||||||||||||    
T  37417379 tttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttggccgacccatgaaaattcaaggacgaat 37417287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 6799436 - 6799494
Alignment:
Q  106 aaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 164  Q
    |||||||| ||||||| ||  ||||||||| |||||||||||||||||||||| |||||    
T  6799436 aaaattcatggacgaatttgtccgatttttaaaaattcaaggacgaatttgagatatta 6799494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 157
Target Start/End: Original strand, 11315339 - 11315449
Alignment:
Q  47 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 146  Q
    |||||||||||   |||||||||||||||  ||||||||| |||| ||||||||||||  |||||  || ||||| || |||||||  | |||||| |||    
T  11315339 gacggagggaccattttgatggacgtctgacaaattcaggaactattttgatatttcgttaaattagggaacgaatttggccgattcataaaaatttaag 11315438  T
Q  147 gacgaatttga 157  Q
    |||||| ||||    
T  11315439 gacgaagttga 11315449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 121
Target Start/End: Original strand, 26584821 - 26584895
Alignment:
Q  47 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 121  Q
    ||||||||||   ||||||||||||||| | ||||| ||||| ||||||||||||| ||||| || |||||||||    
T  26584821 gacggagggatgaatttgatggacgtctattaaattgagggattaatttgatattttgaaaacttgagggacgaa 26584895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 60 - 111
Target Start/End: Complemental strand, 4046403 - 4046352
Alignment:
Q  60 atttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaatt 111  Q
    |||||||||||| |||| ||||| || ||||||||||||||||| |||||||    
T  4046403 atttgatggacgactgttaaatttagagactaatttgatatttcaaaaaatt 4046352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 47 - 118
Target Start/End: Original strand, 29909664 - 29909735
Alignment:
Q  47 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggac 118  Q
    |||||||||||   |||||||||||||||  ||||| ||||||||| ||||||||||| | |||| ||||||    
T  29909664 gacggagggacctttttgatggacgtctgacaaattaagggactaaattgatatttcgcataattgagggac 29909735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 157
Target Start/End: Complemental strand, 361561 - 361455
Alignment:
Q  51 gagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacg 150  Q
    |||||||| | ||||||||||||||   ||||||  |||||||||||||||||  | |||| ||||| ||  || |||||||  | ||||||||||||||    
T  361561 gagggactaaattgatggacgtctgacgaattcaatgactaatttgatatttcacataattgagggatgattttggccgattcatgaaaattcaaggacg 361462  T
Q  151 aatttga 157  Q
    || ||||    
T  361461 aagttga 361455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 164
Target Start/End: Complemental strand, 37645607 - 37645490
Alignment:
Q  47 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 146  Q
    |||||||||||   ||||||  || |||| |||||||| ||||||| | ||||||||  |||||| | ||||||| |   | ||||||| ||||||||||    
T  37645607 gacggagggacaattttgataaacatctgcaaaattcaaggactaaatagatatttcctaaaatttaaggacgaattcgactgatttttaaaaattcaag 37645508  T
Q  147 gacgaatttgaggtatta 164  Q
    |||||| ||| |||||||    
T  37645507 gacgaagttggggtatta 37645490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 15432434 - 15432378
Alignment:
Q  61 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcaggga 117  Q
    |||||||||||||||  |||||||| |||||| ||||||||||| | |||| |||||    
T  15432434 tttgatggacgtctgacaaattcagagactaaattgatatttcgcataattgaggga 15432378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1712 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold1712
Description:

Target: scaffold1712; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 1101 - 982
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||| ||||||| ||| | |   |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  1101 acggagggactaatttgattgacattttgtaaattcagggactattttgatatttcgaataattcagggacgaaatttgccgatttttcaaaattcaagg 1002  T
Q  148 acgaatttgaggtattagtc 167  Q
    || | |||||||||||||||    
T  1001 actattttgaggtattagtc 982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 54228 - 54347
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||| ||||||| ||| | |   |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  54228 acggagggactaatttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcagggacgaaattgaccgatttttcaaaattcaagg 54327  T
Q  148 acgaatttgaggtattagtc 167  Q
    || | |||||||||||||||    
T  54328 actattttgaggtattagtc 54347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1454 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 23 - 164
Target Start/End: Complemental strand, 1407 - 1266
Alignment:
Q  23 tcatcactactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 122  Q
    ||||||| |||||||||  |||| |||||||||||   |||||||||||||||||||||||||||||||| | ||||||||  |||||||| |||||||     
T  1407 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcataaaattcatggacgaat 1308  T
Q  123 tttgccgatttttcaaaattcaaggacgaatttgaggtatta 164  Q
    ||  || |||||| |||||||||||||| |||||||||||||    
T  1307 ttaaccaattttttaaaattcaaggacggatttgaggtatta 1266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 48 - 173
Target Start/End: Original strand, 1525 - 1650
Alignment:
Q  48 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 147  Q
    ||||||||||||||||||  ||| | |   ||||||||||||||| ||| |||||   |||||||||||||||| ||  ||||||||| |||||||||||    
T  1525 acggagggactgatttgaatgacattttgtaaattcagggactaaattgctatttttcaaaattcagggacgaatttgaccgattttttaaaattcaagg 1624  T
Q  148 acgaatttgaggtattagtccttttt 173  Q
    |||||||||| ||||||||| |||||    
T  1625 acgaatttgatgtattagtctttttt 1650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 76 - 165
Target Start/End: Complemental strand, 8353 - 8264
Alignment:
Q  76 taaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattag 165  Q
    ||||||||||||||||| | ||||||| | |||||||| | ||||| || ||| |||||| |||||||||||||||||||||||||||||    
T  8353 taaaattcagggactaaatagatattttgcaaaattcaagaacgaatttggccaattttttaaaattcaaggacgaatttgaggtattag 8264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 96 - 160
Target Start/End: Complemental strand, 436336 - 436272
Alignment:
Q  96 gatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggt 160  Q
    ||||||||| |||||| | ||| ||| || || ||||||| |||||||||| |||||||||||||    
T  436336 gatatttcgcaaaatttatggatgaatttggctgatttttgaaaattcaagaacgaatttgaggt 436272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University