View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11364_high_7 (Length: 332)
Name: NF11364_high_7
Description: NF11364
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11364_high_7 |
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Alignment Details
Target: chr8 (Bit Score: 314; Significance: 1e-177; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 1 - 314
Target Start/End: Original strand, 35835542 - 35835855
Alignment:
| Q |
1 |
acagtcgaattccccagatacaaatcaatccaatataaattctgagccataatccaaaccgatcccatatgcattccattgcagtaggaaggcagtggtc |
100 |
Q |
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| T |
35835542 |
acagtcgaattccccagatacaaatcaatccaatataaattctgagccataatccaaaccgatcccatatgcattccattgcagtaggaaggcagtggtc |
35835641 |
T |
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| Q |
101 |
gctttggtagaggcgcagatttgtatctctctttataagctagaagctatatgatatgtcaaatcattgtacaaaatttggcaaggtttaactgtaaata |
200 |
Q |
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| T |
35835642 |
gctttggtagaggcgcagatttgtatctctctttataagctagaagctatatgatatgtcaaatcattgtacaaaatttggcaaggtttaactgtaaata |
35835741 |
T |
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| Q |
201 |
gaaacccttaagccttttgagatgaaggtaactaatcaactaagcaaaacttgtatgttacaaaggaaagcaaaaataaatgcagcagttggtacaaaga |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35835742 |
gaaacccttaagccttttgagatgaaggtaactaatcaactaagcaaaacttgtatgttacaaaggaaagcaaaaataaatgcagcagttggtacaaaga |
35835841 |
T |
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| Q |
301 |
taacatcagggtct |
314 |
Q |
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|||||||||||||| |
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| T |
35835842 |
taacatcagggtct |
35835855 |
T |
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