View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11367_high_18 (Length: 241)
Name: NF11367_high_18
Description: NF11367
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11367_high_18 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 18 - 241
Target Start/End: Original strand, 47285449 - 47285672
Alignment:
| Q |
18 |
actaggcacaccagcatgcaccaaaaacaaaaggtaataacctggtggtgcaatctcttgagtagatggtccaaccacagtagcataataaatatccaaa |
117 |
Q |
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| T |
47285449 |
actaggcacaccagcatgcaccaaaaacaaaaggtaataacctggtggtgcaatctcttgagtagatggtccaaccacagtagcataataaatatccaaa |
47285548 |
T |
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| Q |
118 |
ttcaccattgttacatcaatcaacttcaaaaccaccatcctctgattcattccaaaagaatgtgtagtaaacgacggtgccaataacctaacggaaactt |
217 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47285549 |
ttcaccattgttacaccaatcaacttcaaaaccaccatcctctgattcattccaaaagaatgtgtagtaaacgacggtgccaataacctaacggaaactt |
47285648 |
T |
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| Q |
218 |
cacttgccgaagcaaacttagcta |
241 |
Q |
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|||||||||||||||||||||||| |
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| T |
47285649 |
cacttgccgaagcaaacttagcta |
47285672 |
T |
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