View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11370_low_5 (Length: 323)
Name: NF11370_low_5
Description: NF11370
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11370_low_5 |
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Alignment Details
Target: chr5 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 16 - 251
Target Start/End: Original strand, 12514514 - 12514749
Alignment:
| Q |
16 |
aatttgaacttcaacctcaaccttgcattctatctaaatcttgatataatagttagtaataaatttcccatcttcttttccaccttatattatgactcat |
115 |
Q |
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| T |
12514514 |
aatttgaacttcaacctcaaccttgcattctatctaaatcttgatataatagttagtaataaatttcccatcttcttttccaccttatattatgactcat |
12514613 |
T |
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| Q |
116 |
ccaccaccacctcctacccccactcccatacttatcttccccatgttagtctcttcaattcaatcacaatcataatcacaacttacccacctctttcttt |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12514614 |
ccaccaccacctcctacccccactcccatacttatcttccccatgttagtctcttcaattcaatcacaatcataatcacaacttacccacctctttcttt |
12514713 |
T |
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| Q |
216 |
tcttcacttttctctctttgcaaagtacattgcaaa |
251 |
Q |
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|||||||| ||||||||||||||||||||||||||| |
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| T |
12514714 |
tcttcactgttctctctttgcaaagtacattgcaaa |
12514749 |
T |
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