View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11373_low_2 (Length: 302)
Name: NF11373_low_2
Description: NF11373
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11373_low_2 |
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Alignment Details
Target: chr5 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 13 - 288
Target Start/End: Original strand, 6466330 - 6466605
Alignment:
| Q |
13 |
tggacatcagttagcgacccttattttatattaaaaacatttcataatctttcaatactttttctccaaacctcaaaatatttcagagttatgtttgtaa |
112 |
Q |
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| T |
6466330 |
tggacatcagttagcgacccttattttatattaaaaacatttcataatctttcaatactttttctccaaacctcaaaatatttcagagttatgtttgtaa |
6466429 |
T |
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| Q |
113 |
caattattcttactatttttattttcaggaaacaatgaagatggacgtatgatgttaaatcaaaccttcacgattggtaannnnnnnncaatacaatata |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
6466430 |
caattattcttactatttttattttcaggaaacaatgaagatggacgtatgatgttaaatcaaaccttcacgattggtaattttttttcaatacaatata |
6466529 |
T |
|
| Q |
213 |
gattgttatgaactaatgcttatgattattgtttgcgaagctggaatctttgcatttgttttgctcttgttctctg |
288 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6466530 |
gattgttatgaactaatgcttatgattattgtttgcgaagctggaatctttgcatttgttttgctcttgttctctg |
6466605 |
T |
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