View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11374_high_28 (Length: 282)
Name: NF11374_high_28
Description: NF11374
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11374_high_28 |
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Alignment Details
Target: chr8 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 11 - 265
Target Start/End: Original strand, 33125079 - 33125334
Alignment:
| Q |
11 |
cagagaaaaaaccaaatattaactaccttaagaatttgaacaatgagaaaagccacccaaacatacataagaactgataactccttccagtgaatgttgt |
110 |
Q |
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| T |
33125079 |
cagagaaaaaaccaaatattaactaccttaagaatttgaacaatgagaaaagccacccaaacatacataagaactgataactccttccagtgaatgttgt |
33125178 |
T |
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| Q |
111 |
ctagtaaagggacctgcacacaagaatttaacatattgtataaatctaagtaaaa-ctcaatgatatggaaaacccttggaattacctcttcatcttgta |
209 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33125179 |
ctagtaaagggacctgaacacaagaatttaacatattgtataaatctaagtaaaacctcaatgatatggaaaacccttggaattacctcttcatcttgta |
33125278 |
T |
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| Q |
210 |
gatcagctggcagtgacttgtaatcttcttcagaagcatctaaaataaggggaaac |
265 |
Q |
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| T |
33125279 |
gatcagctggcagtgacttgtaatcttcttcagaagcatctaaaataaggggaaac |
33125334 |
T |
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