View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11374_high_38 (Length: 240)

Name: NF11374_high_38
Description: NF11374
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11374_high_38
NF11374_high_38
[»] chr7 (7 HSPs)
chr7 (18-240)||(26762690-26762912)
chr7 (33-203)||(16203848-16204020)
chr7 (37-238)||(16986891-16987091)
chr7 (128-240)||(5863277-5863389)
chr7 (33-178)||(16204442-16204589)
chr7 (122-240)||(9135245-9135362)
chr7 (132-240)||(43171929-43172037)
[»] chr2 (5 HSPs)
chr2 (21-240)||(3586453-3586673)
chr2 (21-164)||(23493807-23493950)
chr2 (21-177)||(12127444-12127601)
chr2 (21-105)||(24500010-24500094)
chr2 (50-178)||(36267650-36267778)
[»] chr6 (10 HSPs)
chr6 (29-240)||(19305554-19305763)
chr6 (49-189)||(33597002-33597143)
chr6 (29-231)||(689648-689850)
chr6 (21-67)||(17380308-17380354)
chr6 (54-172)||(22572202-22572320)
chr6 (21-191)||(11087641-11087813)
chr6 (132-240)||(18147396-18147504)
chr6 (122-238)||(20148407-20148523)
chr6 (122-238)||(22184305-22184421)
chr6 (164-240)||(27860873-27860949)
[»] chr4 (6 HSPs)
chr4 (30-172)||(29157260-29157400)
chr4 (132-225)||(2674467-2674560)
chr4 (18-114)||(12684001-12684098)
chr4 (32-191)||(47253415-47253576)
chr4 (21-105)||(17218778-17218862)
chr4 (118-240)||(19643792-19643913)
[»] chr3 (6 HSPs)
chr3 (150-240)||(16704492-16704582)
chr3 (49-178)||(17143559-17143688)
chr3 (29-103)||(20622634-20622708)
chr3 (132-184)||(9800978-9801030)
chr3 (29-88)||(8122704-8122763)
chr3 (159-238)||(25496030-25496109)
[»] chr8 (8 HSPs)
chr8 (132-236)||(5859909-5860013)
chr8 (149-240)||(17698195-17698286)
chr8 (124-236)||(18323037-18323149)
chr8 (118-188)||(13754899-13754970)
chr8 (165-240)||(23269324-23269399)
chr8 (123-177)||(30477794-30477848)
chr8 (132-177)||(6927987-6928032)
chr8 (21-94)||(21416961-21417033)
[»] chr1 (3 HSPs)
chr1 (21-92)||(26977986-26978057)
chr1 (21-178)||(22414927-22415085)
chr1 (137-199)||(2140846-2140909)
[»] scaffold0291 (1 HSPs)
scaffold0291 (21-103)||(8363-8445)
[»] scaffold0023 (2 HSPs)
scaffold0023 (134-240)||(95705-95811)
scaffold0023 (21-111)||(93395-93485)
[»] chr5 (2 HSPs)
chr5 (21-191)||(32418268-32418438)
chr5 (32-95)||(19990868-19990932)
[»] scaffold0360 (1 HSPs)
scaffold0360 (135-240)||(14012-14117)
[»] scaffold0126 (1 HSPs)
scaffold0126 (59-176)||(31655-31772)
[»] scaffold0002 (1 HSPs)
scaffold0002 (167-240)||(379806-379879)
[»] scaffold0101 (1 HSPs)
scaffold0101 (124-156)||(10620-10652)


Alignment Details
Target: chr7 (Bit Score: 191; Significance: 1e-104; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 18 - 240
Target Start/End: Original strand, 26762690 - 26762912
Alignment:
Q  18 cataagaccattcacacgttgacatgtggtctaacttacaccgccttaaggctccgcctctgatggaacacgccaactcaagtgcaccacgccacaccgt 117  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  26762690 cataagaccaatcacacgttgacacgtggtctaacttacaccgccttaaggctcagcctctgagggaacacgccaactcaagtgcaccacgccacaccgt 26762789  T
Q  118 agcacgcccccgcacgaggatcaccatacaagtgtcctctaaccgttcctaatcacacgccccaaaatccggaggtggttatcaacaacacgcgcctata 217  Q
    |||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26762790 agcacgcccctgcgcgaggatcaccatacaagtgtcctctaaccgtccctaatcacacgccccaaaacccggaggtggttatcaacaacacgcgcctata 26762889  T
Q  218 tatgggtgtccttgcttcaccct 240  Q
    |||||||||||||||||||||||    
T  26762890 tatgggtgtccttgcttcaccct 26762912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 203
Target Start/End: Complemental strand, 16204020 - 16203848
Alignment:
Q  33 acgttgacatgtggtctaa-cttacaccgccttaaggctccgcctctgatggaacacgccaactcaagtgcaccacgccacaccgtagcacgcccccgca 131  Q
    ||||||||| |||| |||| |||||||||||||||||||||||  |||| |||||||  |||||  |||||||| || | ||||  ||||| |  || ||    
T  16204020 acgttgacacgtggcctaagcttacaccgccttaaggctccgcacctgaaggaacacaacaactttagtgcaccgcgtctcaccaaagcacacatccaca 16203921  T
Q  132 cgaggatcaccatacaagtgtcctctaaccg-ttcctaatcacacgccccaaaatccggaggtggttatcaac 203  Q
    ||||||||||| |||| |||||||||||||| | |||||||||||||| | |||  |||||  ||||||||||    
T  16203920 cgaggatcaccctacacgtgtcctctaaccgctccctaatcacacgccacgaaacacggagacggttatcaac 16203848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 37 - 238
Target Start/End: Original strand, 16986891 - 16987091
Alignment:
Q  37 tgacatgtggtctaacttacaccgccttaaggctccgcctctgatggaacacgccaactcaagtgcaccacgccacaccgtagcacgcccccgcacgagg 136  Q
    ||||| |||||| ||||| ||||||||||||||||||| ||||| ||| |||||||||||   ||||||  ||||||  | ||   |||| ||||| |||    
T  16986891 tgacacgtggtcaaacttgcaccgccttaaggctccgcgtctgaaggagcacgccaactcgcatgcaccgtgccacataggagtgtgccctcgcacaagg 16986990  T
Q  137 atcaccatacaagtgtcct-ctaaccgttcctaatcacacgccccaaaatccggaggtggttatcaacaacacgcgcctatatatgggtgtccttgcttc 235  Q
    |||||| | || ||||||| ||  || | ||||||||||| || || |||||||||  ||||||   |||| |||||||||||| |||||  ||||||||    
T  16986991 atcaccctgcacgtgtcctgct--ccatccctaatcacacaccgcataatccggagacggttatggccaacgcgcgcctatataagggtgaacttgcttc 16987088  T
Q  236 acc 238  Q
    |||    
T  16987089 acc 16987091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 128 - 240
Target Start/End: Complemental strand, 5863389 - 5863277
Alignment:
Q  128 cgcacgaggatcaccatacaagtgtcctctaaccgttcctaatcacacgccccaaaatccggaggtggttatcaacaacacgcgcctatatatgggtgtc 227  Q
    ||||||||||||||  |||| ||||||||||||||| |||||||||| |||   ||| ||||||| ||||||   |||| |||||||||| | ||||| |    
T  5863389 cgcacgaggatcacgttacacgtgtcctctaaccgtccctaatcacatgccgtgaaacccggaggcggttatttccaacgcgcgcctatacaagggtgac 5863290  T
Q  228 cttgcttcaccct 240  Q
     ||||| ||||||    
T  5863289 attgctccaccct 5863277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 178
Target Start/End: Complemental strand, 16204589 - 16204442
Alignment:
Q  33 acgttgacatgtggtctaa-cttacaccgccttaaggctccgcctctgatggaacacgccaactcaagtgcaccacgccacaccgtagcacgcccccgca 131  Q
    ||||||||| |||| |||| |||||||||||||||||||||||  |||| | ||||| ||||||  |||||||   | | ||||  ||| | |  || |     
T  16204589 acgttgacacgtggcctaagcttacaccgccttaaggctccgcacctgacgcaacacaccaactttagtgcactgtgtctcaccaaagctcacatccacg 16204490  T
Q  132 cgaggatcaccatacaagtgtcctctaaccg-ttcctaatcacacgcc 178  Q
    ||||||||||| |||| |||||||||||||| | ||||||||||||||    
T  16204489 cgaggatcaccctacacgtgtcctctaaccgctccctaatcacacgcc 16204442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 9135245 - 9135362
Alignment:
Q  122 cgcccccgcacgaggatcaccatacaagtgtcctctaaccgttcctaatcacacgccccaaaatccggaggtggttatcaacaacacgcgcctatatatg 221  Q
    ||||||||||||||||||||| |||| ||||||||   |||| |||||||||||||  || || ||||||  |||||| | ||| ||| | ||||||| |    
T  9135245 cgcccccgcacgaggatcaccttacatgtgtcctc-ctccgtccctaatcacacgctacataacccggagacggttatgaccaatacgtgtctatataag 9135343  T
Q  222 ggtgtccttgcttcaccct 240  Q
    ||||   ||||||||||||    
T  9135344 ggtgaatttgcttcaccct 9135362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 240
Target Start/End: Original strand, 43171929 - 43172037
Alignment:
Q  132 cgaggatcaccatacaagtgtcctctaaccgttcctaatcacacgccccaaaatccggaggtggttatcaacaacacgcgcctatatatgggtgtccttg 231  Q
    ||||||||||| | |  |||||||||||| ||||||||||| | ||| ||||| |||||||  |||||   |||  |||||||||||| |||||   |||    
T  43171929 cgaggatcaccctccccgtgtcctctaactgttcctaatcaaatgccgcaaaacccggaggcagttattctcaatccgcgcctatataagggtgaagttg 43172028  T
Q  232 cttcaccct 240  Q
    |||||||||    
T  43172029 cttcaccct 43172037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 6e-24; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 21 - 240
Target Start/End: Complemental strand, 3586673 - 3586453
Alignment:
Q  21 aagaccattcacacgttgacatgtggtctaa-cttacaccgccttaaggctccgcctctgatggaacacgccaactcaagtgcaccacgccacaccgtag 119  Q
    ||||||| ||||||||| ||| ||||  ||| |||||| || |||||||||||||   ||| ||||||||||| ||| |||  ||| | |||||| | ||    
T  3586673 aagaccaatcacacgttaacacgtggcataaacttacatcgtcttaaggctccgcgcttgagggaacacgccagctcgagtaaaccgcaccacacagaag 3586574  T
Q  120 cacgcccccgcacgaggatcaccatacaagtgtcctctaaccgttcctaatcacacgccccaaaatccggaggtggttatcaacaacacgcgcctatata 219  Q
    ||| || |||||||||||||| | |||| ||||||||||||||| |||| ||||||||| || || |  || | |||||| | |||| ||||||||||||    
T  3586573 cacacctccgcacgaggatcatcctacatgtgtcctctaaccgtccctattcacacgccgcataaccaagaagcggttatgaccaacgcgcgcctatata 3586474  T
Q  220 tgggtgtccttgcttcaccct 240  Q
     |||||  |||||||||||||    
T  3586473 agggtgaacttgcttcaccct 3586453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 164
Target Start/End: Complemental strand, 23493950 - 23493807
Alignment:
Q  21 aagaccattcacacgttgacatgtggtctaacttacaccgccttaaggctccgcctctgatggaacacgccaactcaagtgcaccacgccacaccgtagc 120  Q
    ||||||| || |||||||||| |||| ||||||||||||||||| |||||||||   ||| || |||| ||| || || |||| | |||||||| | |||    
T  23493950 aagaccaatcgcacgttgacacgtggcctaacttacaccgccttcaggctccgcgcttgaaggtacacaccagcttaaatgcatcgcgccacacaggagc 23493851  T
Q  121 acgcccccgcacgaggatcaccatacaagtgtcctctaaccgtt 164  Q
     ||| ||| | | ||||||||| |||| ||||||||||||||||    
T  23493850 gcgctcccacgcaaggatcaccctacatgtgtcctctaaccgtt 23493807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 177
Target Start/End: Original strand, 12127444 - 12127601
Alignment:
Q  21 aagaccattcacacgttgacatgtggtctaacttacaccgccttaaggctccgcctctgatggaacacgccaactcaagtgcaccacgccacaccgtagc 120  Q
    ||||||| || | |||||||| |||  ||||||||||| || |||||||||||| ||||| ||||||||||| ||  | |||||  | |||||   |||     
T  12127444 aagaccaatccctcgttgacacgtgacctaacttacactgcattaaggctccgcatctgaaggaacacgccagctttaatgcacagcaccacatactaga 12127543  T
Q  121 acg-cccccgcacgaggatcaccatacaagtgtcctctaaccgttcctaatcacacgc 177  Q
     || ||||| | ||||||||||  |||| |||| |||||||||| |||||||||||||    
T  12127544 gcgccccccacgcgaggatcactctacacgtgttctctaaccgtccctaatcacacgc 12127601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 24500094 - 24500010
Alignment:
Q  21 aagaccattcacacgttgacatgtggtctaacttacaccgccttaaggctccgcctctgatggaacacgccaactcaagtgcacc 105  Q
    ||||||| ||||| ||||||| || |  |||||||||||| |||||||||| ||  |||| | |||||| |||||||||||||||    
T  24500094 aagaccaatcacatgttgacacgtagcataacttacaccgacttaaggctctgctcctgaagaaacacgtcaactcaagtgcacc 24500010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 36267778 - 36267650
Alignment:
Q  50 aacttacaccgccttaaggctccgcctctgatggaacacgccaactcaagtgcaccacgccacaccgtagcacgcccccgcacgaggatcaccatacaag 149  Q
    ||||||||||| |||||||||  ||  | || | ||||||||| ||||| ||||||   ||| || | ||||||||||||| ||||||||||| || | |    
T  36267778 aacttacaccgtcttaaggctttgcgccggaagaaacacgccagctcaattgcaccgtcccatactgaagcacgcccccgcgcgaggatcaccctatacg 36267679  T
Q  150 tgtcctctaaccgttcctaatcacacgcc 178  Q
    |||| ||||||||| || ||||| |||||    
T  36267678 tgtcttctaaccgtcccaaatcatacgcc 36267650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 2e-23; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 29 - 240
Target Start/End: Complemental strand, 19305763 - 19305554
Alignment:
Q  29 tcacacgttgacatgtggtctaacttacaccgccttaaggctccgcctctgatggaacacgccaactcaagtgcaccacgccacaccgtagcacgccccc 128  Q
    |||||||||||||||| | |||| |||||||||  |||||||||||  |||| ||||||||||| |||||||||||| |||||||  |||||  |||| |    
T  19305763 tcacacgttgacatgtagcctaa-ttacaccgctataaggctccgctcctgaaggaacacgccatctcaagtgcaccgcgccacaaagtagcttgcccgc 19305665  T
Q  129 gcacgaggatcaccatacaagtgtcctctaaccgttcctaatcacacgccccaaaatccggaggtggttatcaacaacacgcgcctatatatgggtgtcc 228  Q
     | ||||||||||| |||| ||||||||||| | | ||||||||||| || |||||  || | | | |||||   ||| ||||||||| || ||||| ||    
T  19305664 -cgcgaggatcaccctacacgtgtcctctaatcttccctaatcacaccccgcaaaactcgaaagagtttatccttaactcgcgcctatttaagggtgacc 19305566  T
Q  229 ttgcttcaccct 240  Q
    ||||||||||||    
T  19305565 ttgcttcaccct 19305554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 49 - 189
Target Start/End: Complemental strand, 33597143 - 33597002
Alignment:
Q  49 taacttacaccgccttaaggctccgcctctgatggaacacgccaactcaagtgcaccacgccacaccgtagcacgcc-cccgcacgaggatcaccataca 147  Q
    ||||||||||| ||||||||||||||  |||| ||||||||||||||||||||| ||  |||||||   ||  |||| ||||| ||||| ||| | ||||    
T  33597143 taacttacaccaccttaaggctccgcgcctgagggaacacgccaactcaagtgctccgtgccacacatgagtgcgcctcccgcgcgagggtcatcctaca 33597044  T
Q  148 agtgtcctctaaccgttcctaatcacacgccccaaaatccgg 189  Q
     ||||||||||||||  |||||||| ||||| || |||||||    
T  33597043 tgtgtcctctaaccgcccctaatcatacgccgcataatccgg 33597002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 231
Target Start/End: Original strand, 689648 - 689850
Alignment:
Q  29 tcacacgttgacatgtggtctaacttacaccgccttaaggctccgcctctgatggaacacgccaactcaagtgcaccacgccacaccgtagcacgccccc 128  Q
    |||||||| |||| || | |||| ||||||||||||||| ||||||  |||| || ||| | |  ||||||||||||  |||||||   |||||| ||||    
T  689648 tcacacgtcgacacgttgcctaagttacaccgccttaagactccgcacctgagggtacatgtctgctcaagtgcaccgtgccacacaagagcacgtcccc 689747  T
Q  129 gcacgaggatcaccatacaagtgtcctctaaccgttcctaatcacacgccccaaaatccggaggtggttatcaacaacacgcgcctatatatgggtgtcc 228  Q
    || |||||| |||| | || || ||||||||| || | |||||||||||| |||||  |||||  | |||| | ||||  ||||||||||| ||||| ||    
T  689748 gcgcgaggaccacccttcacgtatcctctaactgtccttaatcacacgccgcaaaactcggagacgattatgatcaacgtgcgcctatataagggtgacc 689847  T
Q  229 ttg 231  Q
    |||    
T  689848 ttg 689850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 17380354 - 17380308
Alignment:
Q  21 aagaccattcacacgttgacatgtggtctaacttacaccgccttaag 67  Q
    ||||||| || ||||||||||||||| ||||||||||||||||||||    
T  17380354 aagaccaatcccacgttgacatgtggcctaacttacaccgccttaag 17380308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 172
Target Start/End: Complemental strand, 22572320 - 22572202
Alignment:
Q  54 tacaccgccttaaggctccgcctctgatggaacacgccaactcaagtgcaccacgccacaccgtagcacgcccccgcacgaggatcaccatacaagtgtc 153  Q
    ||||||| ||||||||||||| ||| | ||| ||||  | ||| |||||||||| ||| || | ||||| |||  | ||||||||||||  ||| |||||    
T  22572320 tacaccgtcttaaggctccgcatctaaaggagcacgtaagctctagtgcaccacaccagacagaagcacacccatgtacgaggatcaccccacacgtgtc 22572221  T
Q  154 ctctaaccgttcctaatca 172  Q
    |||||||||| ||||||||    
T  22572220 ctctaaccgtccctaatca 22572202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 191
Target Start/End: Complemental strand, 11087813 - 11087641
Alignment:
Q  21 aagaccattcacacgttgacatgtggtctaa-cttacaccgccttaaggctccgc-ctctgatggaacacgccaactcaagtgcaccacgccacaccgta 118  Q
    ||||||| ||||||||| ||| ||||  ||| ||||||||| ||||||||||||| ||| || ||||||| |||||| || | |||   ||||||| | |    
T  11087813 aagaccaatcacacgttaacacgtggcataaacttacaccgtcttaaggctccgcgctc-gagggaacactccaacttaaatacactgtgccacacagaa 11087715  T
Q  119 gcacg-cccccgcacgaggatcaccatacaagtgtcctctaaccgttcctaatcacacgccccaaaatccggag 191  Q
    || || |||||   ||||||||||| |||| ||||||||||||||| | |||| ||||||| || |||||||||    
T  11087714 gcgcggcccccatgcgaggatcaccctacacgtgtcctctaaccgtccttaattacacgccgcataatccggag 11087641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 240
Target Start/End: Complemental strand, 18147504 - 18147396
Alignment:
Q  132 cgaggatcaccatacaagtgtcctctaaccgttcctaatcacacgccccaaaatccggaggtggttatcaacaacacgcgcctatatatgggtgtccttg 231  Q
    ||||||||||| ||||  |||||||||||||| |||||||||||||  ||||| || |||| |||||    |||  ||| |||||||| ||||| | |||    
T  18147504 cgaggatcaccttacacatgtcctctaaccgtccctaatcacacgctgcaaaacccagaggcggttaatcccaatgcgcacctatataagggtgacattg 18147405  T
Q  232 cttcaccct 240  Q
    |||||||||    
T  18147404 cttcaccct 18147396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 238
Target Start/End: Complemental strand, 20148523 - 20148407
Alignment:
Q  122 cgcccccgcacgaggatcaccatacaagtgtcctctaaccgttcctaatcacacgccccaaaatccggaggtggttatcaacaacacgcgcctatatatg 221  Q
    |||||||||  ||||||||| |||||||| |||| |||||   |||||| ||| ||| | ||| |||||||  |||||   |||| || ||||||||| |    
T  20148523 cgcccccgcgtgaggatcactatacaagtatcctataaccaaccctaatgacatgccgcgaaacccggaggcagttattctcaacgcgtgcctatataag 20148424  T
Q  222 ggtgtccttgcttcacc 238  Q
    |||| ||||||||||||    
T  20148423 ggtgaccttgcttcacc 20148407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 238
Target Start/End: Original strand, 22184305 - 22184421
Alignment:
Q  122 cgcccccgcacgaggatcaccatacaagtgtcctctaaccgttcctaatcacacgccccaaaatccggaggtggttatcaacaacacgcgcctatatatg 221  Q
    |||||||||  ||||||||| |||||||| |||| |||||   |||||| ||| ||| | ||| |||||||  |||||   |||| || ||||||||| |    
T  22184305 cgcccccgcgtgaggatcactatacaagtatcctataaccaaccctaatgacatgccgcgaaacccggaggcagttattctcaacgcgtgcctatataag 22184404  T
Q  222 ggtgtccttgcttcacc 238  Q
    |||| ||||||||||||    
T  22184405 ggtgaccttgcttcacc 22184421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 240
Target Start/End: Original strand, 27860873 - 27860949
Alignment:
Q  164 tcctaatcacacgccccaaaatccggaggtggttatcaacaacacgcgcctatatatgggtgtccttgcttcaccct 240  Q
    ||||||||||||||| || || ||||||  ||||||   ||||||||||||||| | |||||  |||||||||||||    
T  27860873 tcctaatcacacgccgcataacccggagacggttatggccaacacgcgcctataaaagggtgaacttgcttcaccct 27860949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 2e-23; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 29157400 - 29157260
Alignment:
Q  30 cacacgttgacatgtggtctaacttacaccgccttaaggctccgcctctgatggaacacgccaactcaagtgcaccacgccacaccgtagcacgcccccg 129  Q
    |||| |||||||  |||| |||||||||||| |||||||||||||||  || ||||||||||| ||||| |||||| |||||||| | ||| |||| |||    
T  29157400 cacatgttgacacatggtataacttacaccgacttaaggctccgcct--gaaggaacacgccagctcaaatgcaccgcgccacacaggagcgcgccaccg 29157303  T
Q  130 cacgaggatcaccatacaagtgtcctctaaccgttcctaatca 172  Q
    |  |||||||| | |||| ||||||||||||||| ||||||||    
T  29157302 cgtgaggatcatcctacatgtgtcctctaaccgtccctaatca 29157260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 132 - 225
Target Start/End: Original strand, 2674467 - 2674560
Alignment:
Q  132 cgaggatcaccatacaagtgtcctctaaccgttcctaatcacacgccccaaaatccggaggtggttatcaacaacacgcgcctatatatgggtg 225  Q
    ||||||||||| |||| |||||||||||| || |||||||||||||| ||||||||||||  ||||||   |||| ||||| |||||| |||||    
T  2674467 cgaggatcaccctacacgtgtcctctaactgtccctaatcacacgccgcaaaatccggagacggttatgctcaacgcgcgcttatataagggtg 2674560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 12684098 - 12684001
Alignment:
Q  18 cataagaccattcacacgttgacatgtggtctaa-cttacaccgccttaaggctccgcctctgatggaacacgccaactcaagtgcaccacgccacac 114  Q
    |||||||||| ||||||||||||| ||||  ||| |||||| ||  |||||| |||||  |||| | ||||||||| |||||||||||| ||||||||    
T  12684098 cataagaccaatcacacgttgacacgtggcataaacttacatcgtattaagggtccgctcctgaagaaacacgccagctcaagtgcaccgcgccacac 12684001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 191
Target Start/End: Complemental strand, 47253576 - 47253415
Alignment:
Q  32 cacgttgacatgtggtctaa-cttacaccgccttaaggctccgcctctgatggaacacgccaactcaagtgcaccacgccacaccgtagcacgcccccgc 130  Q
    |||||||||| |||||| || ||| ||||||||||||||||||| ||||| |||||||  ||||    |||||||||  |||| |  || ||||| ||||    
T  47253576 cacgttgacacgtggtccaaacttgcaccgccttaaggctccgcgtctgaaggaacacatcaacgttggtgcaccacatcacatccaagtacgcctccgc 47253477  T
Q  131 acgaggatcaccatacaagtgtcctctaaccgttc-ctaatcacacgccccaaaatccggag 191  Q
     ||||||||||  |||| |||||||||||  | || |||||||||| || ||||| ||||||    
T  47253476 gcgaggatcactctacatgtgtcctctaattgctctctaatcacacaccgcaaaacccggag 47253415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 17218862 - 17218778
Alignment:
Q  21 aagaccattcacacgttgacatgtggtctaacttacaccgccttaaggctccgcctctgatggaacacgccaactcaagtgcacc 105  Q
    |||||||  |||||||| ||  ||||| ||||||||| || ||||||||||||  ||||| || |||||||||||| ||||||||    
T  17218862 aagaccaaacacacgttaacgcgtggtataacttacatcgtcttaaggctccgtgtctgaggggacacgccaactcgagtgcacc 17218778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 240
Target Start/End: Complemental strand, 19643913 - 19643792
Alignment:
Q  118 agcacgcccccgcacgaggatcaccatacaagtgtcctctaaccgttcctaatcacacgccccaaaatccggaggtggttatcaacaacacgcgcctata 217  Q
    ||||||||||||| ||||||||||| || | ||||||||| ||||| ||||||| |||||| || ||  | |||  |||||||  |||| | ||||||||    
T  19643913 agcacgcccccgcgcgaggatcaccttatatgtgtcctct-accgtccctaatctcacgccgcataactcagagacggttatcctcaacgcacgcctata 19643815  T
Q  218 tatgggtgtccttgcttcaccct 240  Q
    || |||||  |||| ||||||||    
T  19643814 taagggtgaacttgtttcaccct 19643792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 150 - 240
Target Start/End: Complemental strand, 16704582 - 16704492
Alignment:
Q  150 tgtcctctaaccgttcctaatcacacgccccaaaatccggaggtggttatcaacaacacgcgcctatatatgggtgtccttgcttcaccct 240  Q
    ||||||||||||||  ||||||||||    ||||||||||||| |||||||| |||| |||||||||||| |||||  |||||||||||||    
T  16704582 tgtcctctaaccgtctctaatcacacatagcaaaatccggaggcggttatcaccaacgcgcgcctatataagggtgaacttgcttcaccct 16704492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 49 - 178
Target Start/End: Original strand, 17143559 - 17143688
Alignment:
Q  49 taacttacaccgccttaaggctccgcctctgatggaacacgccaactcaagtgcaccacgccacaccgtagcacgcccccgcacgaggatcaccatacaa 148  Q
    ||||||||||||||||||||||| || ||||| ||||||| |||||| || | | |   | ||||| | ||||||||||| || ||||||| || ||||     
T  17143559 taacttacaccgccttaaggctctgcgtctgagggaacacaccaacttaaattctctgtgacacacagaagcacgcccccacatgaggatcgccctacat 17143658  T
Q  149 gtgtcctctaaccgttcctaatcacacgcc 178  Q
    ||||||||||  ||| ||||||||||||||    
T  17143659 gtgtcctctagtcgtccctaatcacacgcc 17143688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 20622708 - 20622634
Alignment:
Q  29 tcacacgttgacatgtggtctaacttacaccgccttaaggctccgcctctgatggaacacgccaactcaagtgca 103  Q
    ||||||||| ||||||||  ||||||||||||| ||||||||||||  |||| | | ||||||||||||||||||    
T  20622708 tcacacgttaacatgtggcataacttacaccgctttaaggctccgcgcctgaggtagcacgccaactcaagtgca 20622634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 9800978 - 9801030
Alignment:
Q  132 cgaggatcaccatacaagtgtcctctaaccgttcctaatcacacgccccaaaa 184  Q
    ||||| ||||| |||| ||||||||||||||| |||||||||||||| |||||    
T  9800978 cgagggtcaccctacatgtgtcctctaaccgtccctaatcacacgccgcaaaa 9801030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 8122704 - 8122763
Alignment:
Q  29 tcacacgttgacatgtggtctaacttacaccgccttaaggctccgcctctgatggaacac 88  Q
    |||||| ||||||  || |||||||||||||||||||||||||| | ||||| |||||||    
T  8122704 tcacacattgacacatgatctaacttacaccgccttaaggctccacgtctgaaggaacac 8122763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 238
Target Start/End: Complemental strand, 25496109 - 25496030
Alignment:
Q  159 accgttcctaatcacacgccccaaaatccggaggtggttatcaacaacacgcgcctatatatgggtgtccttgcttcacc 238  Q
    |||||||||||||||||||| || || ||||||  |||||| | ||||  ||||||||||| |||||  |||||||||||    
T  25496109 accgttcctaatcacacgccgcataacccggagacggttatgatcaacgtgcgcctatataagggtgaacttgcttcacc 25496030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 236
Target Start/End: Complemental strand, 5860013 - 5859909
Alignment:
Q  132 cgaggatcaccatacaagtgtcctctaaccgttcctaatcacacgccccaaaatccggaggtggttatcaacaacacgcgcctatatatgggtgtccttg 231  Q
    ||||||||||  |||| ||||| | ||||||| ||||||||| |||| |||||||| |||| ||||||   |||| |||||||||||| ||||| |||||    
T  5860013 cgaggatcactctacacgtgtcatttaaccgtccctaatcactcgccgcaaaatccagaggcggttatttccaacgcgcgcctatataagggtgaccttg 5859914  T
Q  232 cttca 236  Q
    |||||    
T  5859913 cttca 5859909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 240
Target Start/End: Original strand, 17698195 - 17698286
Alignment:
Q  149 gtgtcctctaaccgttcctaatcacacgccccaaaatccggaggtggttatcaacaacacgcgcctatatatgggtgtccttgcttcaccct 240  Q
    ||||||| ||||||| |||||||||||||| | |||| || ||  ||||||   | || |||||||||||||||||| ||||||||||||||    
T  17698195 gtgtcctttaaccgtccctaatcacacgccgctaaattcgaagacggttatgctcgacgcgcgcctatatatgggtggccttgcttcaccct 17698286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 236
Target Start/End: Complemental strand, 18323149 - 18323037
Alignment:
Q  124 cccccgcacgaggatcaccatacaagtgtcctctaaccgttcctaatcacacgccccaaaatccggaggtggttatcaacaacacgcgcctatatatggg 223  Q
    |||||||||||||||||   |||  ||||||||||||| | |||||||||||||| | ||| |||||||  |||||   |||| |  ||||||||| |||    
T  18323149 cccccgcacgaggatcatgctacgtgtgtcctctaaccatccctaatcacacgccgcgaaacccggaggcagttattctcaactcttgcctatataaggg 18323050  T
Q  224 tgtccttgcttca 236  Q
    || ||||||||||    
T  18323049 tgaccttgcttca 18323037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 188
Target Start/End: Complemental strand, 13754970 - 13754899
Alignment:
Q  118 agcacgcccccgcacgaggatcaccatacaagtgtcctctaaccgttc-ctaatcacacgccccaaaatccg 188  Q
    |||||||| |||| ||| ||||||||| ||  | |||||||||||||| ||||||||||||| |||||||||    
T  13754970 agcacgcctccgcgcgacgatcaccattcacatttcctctaaccgttcactaatcacacgccgcaaaatccg 13754899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 240
Target Start/End: Complemental strand, 23269399 - 23269324
Alignment:
Q  165 cctaatcacacgccccaaaatccggaggtggttatcaacaacacgcgcctatatatgggtgtccttgcttcaccct 240  Q
    |||| ||||||||  |||||  |||||  |||||||  ||||||||||||||||||||||| | ||||||||||||    
T  23269399 cctattcacacgctgcaaaactcggagacggttatcctcaacacgcgcctatatatgggtgacattgcttcaccct 23269324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 30477848 - 30477794
Alignment:
Q  123 gcccccgcacgaggatcaccatacaagtgtcctctaaccgttcctaatcacacgc 177  Q
    |||||||||||||| ||||| |||| ||||||||||||  ||| |||||||||||    
T  30477848 gcccccgcacgaggttcaccctacatgtgtcctctaactattcttaatcacacgc 30477794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 177
Target Start/End: Original strand, 6927987 - 6928032
Alignment:
Q  132 cgaggatcaccatacaagtgtcctctaaccgttcctaatcacacgc 177  Q
    ||||||||||  |||| ||||||||| |||||||||||||||||||    
T  6927987 cgaggatcactctacacgtgtcctcttaccgttcctaatcacacgc 6928032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 21417033 - 21416961
Alignment:
Q  21 aagaccattcacacgttgacatgtggtctaacttacaccgccttaaggctccgcctctgatggaacacgccaac 94  Q
    ||||||| ||||||||| ||||||||  |||||| ||||||||||||||||||   |||| ||||||| |||||    
T  21417033 aagaccaatcacacgtt-acatgtggcataacttgcaccgccttaaggctccgtgcctgagggaacacaccaac 21416961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 26978057 - 26977986
Alignment:
Q  21 aagaccattcacacgttgacatgtggtctaacttacaccgccttaaggctccgcctctgatggaacacgcca 92  Q
    ||||||| ||||||| |||||||||| ||||||||||||||||||||||| |||  |||| | |||||||||    
T  26978057 aagaccaatcacacgctgacatgtggcctaacttacaccgccttaaggcttcgcgcctgaggaaacacgcca 26977986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 178
Target Start/End: Complemental strand, 22415085 - 22414927
Alignment:
Q  21 aagaccattcacacgttgacatgtggtctaa-cttacaccgccttaaggctccgcctctgatggaacacgccaactcaagtgcaccacgccacaccgtag 119  Q
    ||||||| ||||| ||||||| ||||  ||| |||||||| ||||||||||||||  |||| |||||||| || |||||||||||  ||||||||   ||    
T  22415085 aagaccaatcacatgttgacacgtggcataaacttacacctccttaaggctccgcacctgaaggaacacgtcagctcaagtgcactgcgccacacataag 22414986  T
Q  120 cacgcccccgcacgaggatcaccatacaagtgtcctctaaccgttcctaatcacacgcc 178  Q
    | | |||| ||  |||||||||| |||| ||||| |||||| || | |||||| |||||    
T  22414985 cgcacccctgcgtgaggatcaccttacatgtgtcatctaactgtccataatcatacgcc 22414927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 199
Target Start/End: Original strand, 2140846 - 2140909
Alignment:
Q  137 atcaccatacaagtgtcctctaaccg-ttcctaatcacacgccccaaaatccggaggtggttat 199  Q
    ||||||||||| |||||||||||||| ||||||||||||| || ||||| ||| | ||||||||    
T  2140846 atcaccatacacgtgtcctctaaccgtttcctaatcacacaccacaaaacccgaaagtggttat 2140909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 103
Target Start/End: Original strand, 8363 - 8445
Alignment:
Q  21 aagaccattcacacgttgacatgtggtctaacttacaccgccttaaggctccgcctctgatggaacacgccaactcaagtgca 103  Q
    ||||||| ||||||||| ||| ||||| |||| |||| ||||||||||||| |  || || ||||||||||| ||||||||||    
T  8363 aagaccaatcacacgttaacacgtggtataacctacatcgccttaaggctctgtgtcagagggaacacgccagctcaagtgca 8445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 134 - 240
Target Start/End: Original strand, 95705 - 95811
Alignment:
Q  134 aggatcaccatacaagtgtcctctaaccgttcctaatcacacgccccaaaatccggaggtggttatcaacaacacgcgcctatatatgggtgtccttgct 233  Q
    ||||||||  |||| ||||||||||||||| |||||||||||||| |||||  ||||||| | |||    ||| || ||||||||| ||||| | |||||    
T  95705 aggatcactctacatgtgtcctctaaccgtccctaatcacacgccgcaaaactcggaggtagatattccaaacgcgtgcctatataagggtgacgttgct 95804  T
Q  234 tcaccct 240  Q
    |||||||    
T  95805 tcaccct 95811  T

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Target: scaffold0023; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 111
Target Start/End: Original strand, 93395 - 93485
Alignment:
Q  21 aagaccattcacacgttgacatgtggtctaacttacaccgccttaaggctccgcctctgatggaacacgccaactcaagtgcaccacgcca 111  Q
    ||||||| ||| | ||||||| |||| |||||||||||| |||||| |||||||  |||| ||||||| ||| || || ||||||| ||||    
T  93395 aagaccaatcatatgttgacacgtggcctaacttacaccaccttaaagctccgcgcctgaaggaacacaccagcttaaatgcaccaagcca 93485  T

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Target: chr5 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 191
Target Start/End: Original strand, 32418268 - 32418438
Alignment:
Q  21 aagaccattcacacgttgacatgtggtctaacttacaccgccttaaggctccgcctctgatggaacacgccaactcaagtgcaccacgccacaccgtagc 120  Q
    ||||||| || |||||||||| |||   ||||||||||||||||||||||  |  | ||| | |||||| |||||  |||||| | || || || | |      
T  32418268 aagaccaatcgcacgttgacacgtgacataacttacaccgccttaaggctttgtgtatgaggaaacacgtcaacttgagtgcatcgcgtcatacaggaag 32418367  T
Q  121 acgcccccgcacgaggatcaccatacaagtgtcctctaaccgttcctaatcacacgccccaaaatccggag 191  Q
     ||||||||| ||||||||||| |||| |||||| |||||| | |||||||||||||| || || ||||||    
T  32418368 gcgcccccgcgcgaggatcaccctacacgtgtcccctaaccatccctaatcacacgccgcataacccggag 32418438  T

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Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 95
Target Start/End: Original strand, 19990868 - 19990932
Alignment:
Q  32 cacgttgacatgtggtctaa-cttacaccgccttaaggctccgcctctgatggaacacgccaact 95  Q
    ||||||||||||||| |||| ||| |||||||||||||||||||  |||| ||||||| ||||||    
T  19990868 cacgttgacatgtggcctaaacttgcaccgccttaaggctccgcgcctgaaggaacacaccaact 19990932  T

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Target: scaffold0360 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 240
Target Start/End: Complemental strand, 14117 - 14012
Alignment:
Q  135 ggatcaccatacaagtgtcctctaaccgttcctaatcacacgccccaaaatccggaggtggttatcaacaacacgcgcctatatatgggtgtccttgctt 234  Q
    ||||||||||||  |||||||||||| || ||||||||||| || ||||| | ||||| ||||||   |||  | | |||||||| |||||  |||||||    
T  14117 ggatcaccatacgcgtgtcctctaacggtccctaatcacacaccgcaaaacctggaggcggttattcccaatgcacacctatataagggtgatcttgctt 14018  T
Q  235 caccct 240  Q
    ||||||    
T  14017 caccct 14012  T

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Target: scaffold0126 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 176
Target Start/End: Original strand, 31655 - 31772
Alignment:
Q  59 cgccttaaggctccgcctctgatggaacacgccaactcaagtgcaccacgccacaccgtagcacgcccccgcacgaggatcaccatacaagtgtcctcta 158  Q
    |||||||||||| |||  ||||  || |||| ||||||||||||| | |||||||| | ||| | ||||| ||||||||||||| ||||  | || | ||    
T  31655 cgccttaaggcttcgcggctgaaagagcacgtcaactcaagtgcaacgcgccacacagaagcgcacccccacacgaggatcaccctacacttttcatata 31754  T
Q  159 accgttcctaatcacacg 176  Q
    |||||  |||||||||||    
T  31755 accgtctctaatcacacg 31772  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 240
Target Start/End: Complemental strand, 379879 - 379806
Alignment:
Q  167 taatcacacgccccaaaatccggaggtggttatcaacaacacgcgcctatatatgggtgtccttgcttcaccct 240  Q
    |||||||||||| || ||| | ||| ||||||| | ||||| ||||||||||| |||||  |||||||||||||    
T  379879 taatcacacgccgcataattcagagatggttatgaccaacatgcgcctatatacgggtgaacttgcttcaccct 379806  T

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Target: scaffold0101 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 156
Target Start/End: Original strand, 10620 - 10652
Alignment:
Q  124 cccccgcacgaggatcaccatacaagtgtcctc 156  Q
    |||||||||||||||||||||||| ||||||||    
T  10620 cccccgcacgaggatcaccatacacgtgtcctc 10652  T

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