View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11374_high_44 (Length: 201)
Name: NF11374_high_44
Description: NF11374
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11374_high_44 |
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Alignment Details
Target: chr1 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 19 - 187
Target Start/End: Complemental strand, 35068539 - 35068349
Alignment:
| Q |
19 |
gattcttctgcatcaactttgaactcttagaacgcagaatgaaaatcaatcaaaatgatcgcaaacgcaggacgaacgttgtcctcgaatacagccctga |
118 |
Q |
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| T |
35068539 |
gattcatctgcatcaactttgaactcttagaacgcagaacgaaaatcaatcaaaatgatcgcaaacgcaggacgaacgttgtcctccaatacagccctga |
35068440 |
T |
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| Q |
119 |
gaaaggagtg----------------------accactggttagattctatcaaaacagacctgaagccttctacctcttctactcctatg |
187 |
Q |
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|||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
35068439 |
gaaacgagtgaccatggagactcctgcgtactaccactggttagattctatcaaaacagacccgaagccttctacctcttctactcctatg |
35068349 |
T |
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