View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11374_low_26 (Length: 348)

Name: NF11374_low_26
Description: NF11374
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11374_low_26
NF11374_low_26
[»] chr8 (28 HSPs)
chr8 (19-331)||(40204864-40205176)
chr8 (6-146)||(616776-616916)
chr8 (6-139)||(623176-623309)
chr8 (19-139)||(33700215-33700336)
chr8 (6-128)||(14237291-14237413)
chr8 (6-128)||(18044436-18044558)
chr8 (6-128)||(32998461-32998583)
chr8 (6-128)||(40494395-40494517)
chr8 (6-139)||(41263810-41263943)
chr8 (6-139)||(42587377-42587510)
chr8 (6-83)||(132073-132150)
chr8 (28-145)||(5878311-5878427)
chr8 (34-119)||(11162416-11162500)
chr8 (20-120)||(18090348-18090447)
chr8 (6-129)||(13216850-13216973)
chr8 (6-140)||(36641987-36642122)
chr8 (6-81)||(38957228-38957303)
chr8 (37-83)||(3370416-3370462)
chr8 (41-123)||(4270256-4270338)
chr8 (19-69)||(40716665-40716715)
chr8 (6-139)||(8394346-8394479)
chr8 (19-76)||(18035163-18035220)
chr8 (19-83)||(2766190-2766254)
chr8 (7-102)||(5173288-5173384)
chr8 (22-81)||(3100640-3100699)
chr8 (36-102)||(22489433-22489499)
chr8 (6-128)||(35403527-35403649)
chr8 (19-55)||(32855604-32855640)
[»] chr2 (32 HSPs)
chr2 (34-139)||(42133752-42133857)
chr2 (19-128)||(11931702-11931811)
chr2 (34-139)||(9006941-9007046)
chr2 (28-129)||(43444691-43444792)
chr2 (19-128)||(7799858-7799967)
chr2 (6-139)||(8042151-8042284)
chr2 (6-139)||(19141195-19141328)
chr2 (28-128)||(19262691-19262791)
chr2 (6-137)||(5404998-5405129)
chr2 (20-139)||(16865054-16865173)
chr2 (6-128)||(7608060-7608182)
chr2 (6-123)||(11841722-11841839)
chr2 (6-102)||(6223103-6223199)
chr2 (34-120)||(44563154-44563241)
chr2 (23-129)||(36072184-36072290)
chr2 (19-84)||(38292007-38292072)
chr2 (6-139)||(39358146-39358279)
chr2 (19-83)||(9172288-9172352)
chr2 (19-102)||(22839069-22839152)
chr2 (29-84)||(24252015-24252070)
chr2 (19-121)||(31610795-31610897)
chr2 (6-128)||(44365168-44365290)
chr2 (7-76)||(38839136-38839205)
chr2 (23-139)||(2183103-2183219)
chr2 (41-128)||(33607387-33607474)
chr2 (38-112)||(7666117-7666191)
chr2 (28-123)||(31904031-31904126)
chr2 (20-65)||(3013839-3013884)
chr2 (36-101)||(13117483-13117548)
chr2 (34-83)||(13125302-13125351)
chr2 (37-84)||(4835709-4835757)
chr2 (37-125)||(40618823-40618910)
[»] chr1 (34 HSPs)
chr1 (19-123)||(3485349-3485453)
chr1 (23-139)||(30385291-30385407)
chr1 (6-139)||(11641196-11641329)
chr1 (6-139)||(36757615-36757748)
chr1 (19-139)||(40800529-40800649)
chr1 (6-139)||(6402539-6402672)
chr1 (6-139)||(40771901-40772034)
chr1 (19-82)||(22575729-22575792)
chr1 (20-139)||(44647856-44647975)
chr1 (43-125)||(16689838-16689920)
chr1 (6-83)||(9342774-9342851)
chr1 (19-128)||(15382568-15382677)
chr1 (19-128)||(30003544-30003653)
chr1 (6-139)||(30701718-30701851)
chr1 (6-139)||(42788671-42788804)
chr1 (34-139)||(44644512-44644617)
chr1 (23-139)||(6766372-6766488)
chr1 (19-139)||(16120582-16120702)
chr1 (23-130)||(38153423-38153530)
chr1 (6-128)||(36399109-36399231)
chr1 (6-123)||(17305970-17306087)
chr1 (37-83)||(50972794-50972840)
chr1 (19-76)||(31444986-31445043)
chr1 (6-102)||(42735294-42735393)
chr1 (6-139)||(52024026-52024159)
chr1 (19-123)||(15912478-15912582)
chr1 (6-123)||(24321275-24321394)
chr1 (37-93)||(34368114-34368170)
chr1 (28-84)||(34634962-34635018)
chr1 (19-79)||(40977630-40977690)
chr1 (28-84)||(48375057-48375113)
chr1 (19-114)||(14777057-14777152)
chr1 (28-83)||(28030832-28030887)
chr1 (41-102)||(26910113-26910174)
[»] chr4 (49 HSPs)
chr4 (19-128)||(20875389-20875498)
chr4 (14-139)||(35381031-35381156)
chr4 (23-139)||(2760873-2760989)
chr4 (6-142)||(29830340-29830476)
chr4 (29-135)||(3036984-3037090)
chr4 (6-128)||(12240307-12240429)
chr4 (19-139)||(38416792-38416912)
chr4 (6-128)||(44232206-44232328)
chr4 (19-128)||(7614626-7614735)
chr4 (6-139)||(47386415-47386548)
chr4 (6-139)||(54330819-54330952)
chr4 (6-139)||(55209703-55209836)
chr4 (19-139)||(35686373-35686493)
chr4 (6-102)||(45291869-45291965)
chr4 (6-102)||(50205780-50205876)
chr4 (19-98)||(12625292-12625371)
chr4 (20-139)||(38716887-38717005)
chr4 (20-139)||(38721337-38721456)
chr4 (34-124)||(56297859-56297949)
chr4 (6-83)||(26125764-26125841)
chr4 (6-139)||(26169986-26170119)
chr4 (6-83)||(43967779-43967856)
chr4 (6-102)||(25296709-25296805)
chr4 (6-141)||(17610278-17610413)
chr4 (41-123)||(29051700-29051782)
chr4 (6-140)||(31010213-31010347)
chr4 (19-84)||(14144599-14144664)
chr4 (34-139)||(27407776-27407881)
chr4 (34-123)||(34316537-34316625)
chr4 (28-128)||(2571033-2571133)
chr4 (34-81)||(19903807-19903854)
chr4 (20-83)||(36523111-36523174)
chr4 (6-84)||(9029578-9029656)
chr4 (6-108)||(17446762-17446864)
chr4 (19-81)||(55091329-55091391)
chr4 (6-83)||(30446354-30446430)
chr4 (38-129)||(23360188-23360276)
chr4 (34-102)||(55800871-55800939)
chr4 (20-128)||(27755730-27755842)
chr4 (42-128)||(56079993-56080079)
chr4 (6-83)||(4467648-4467725)
chr4 (37-110)||(29586005-29586077)
chr4 (28-85)||(50181114-50181171)
chr4 (23-84)||(53304480-53304541)
chr4 (37-77)||(5119081-5119121)
chr4 (23-67)||(10550498-10550542)
chr4 (52-128)||(19897650-19897726)
chr4 (37-81)||(25633254-25633298)
chr4 (19-83)||(39307752-39307816)
[»] chr3 (38 HSPs)
chr3 (19-123)||(15332948-15333052)
chr3 (34-138)||(41252920-41253024)
chr3 (19-139)||(42761625-42761745)
chr3 (6-139)||(13499464-13499597)
chr3 (6-139)||(42490325-42490458)
chr3 (29-123)||(3430426-3430520)
chr3 (6-144)||(39866270-39866408)
chr3 (6-139)||(27010603-27010736)
chr3 (6-139)||(33415799-33415932)
chr3 (19-102)||(27334873-27334956)
chr3 (34-80)||(41751567-41751613)
chr3 (19-128)||(6910345-6910454)
chr3 (6-123)||(20765212-20765329)
chr3 (6-83)||(30213860-30213937)
chr3 (23-123)||(23940508-23940608)
chr3 (19-134)||(33803526-33803642)
chr3 (6-102)||(36227582-36227678)
chr3 (40-124)||(49404758-49404842)
chr3 (37-139)||(15568095-15568196)
chr3 (6-128)||(21797567-21797689)
chr3 (19-120)||(22786649-22786748)
chr3 (34-100)||(27813445-27813511)
chr3 (19-77)||(38137886-38137944)
chr3 (20-102)||(44561821-44561903)
chr3 (6-83)||(21005349-21005426)
chr3 (36-128)||(34912301-34912393)
chr3 (19-123)||(48334663-48334766)
chr3 (34-77)||(3017853-3017896)
chr3 (37-116)||(15664105-15664184)
chr3 (19-70)||(17643800-17643851)
chr3 (36-139)||(19327489-19327592)
chr3 (19-120)||(22782285-22782384)
chr3 (23-84)||(47164598-47164660)
chr3 (46-139)||(19823900-19823993)
chr3 (34-139)||(30057299-30057404)
chr3 (55-128)||(32273721-32273794)
chr3 (6-83)||(43467871-43467948)
chr3 (23-83)||(25527460-25527520)
[»] chr5 (34 HSPs)
chr5 (19-145)||(12456782-12456907)
chr5 (22-123)||(32017229-32017330)
chr5 (19-139)||(24992280-24992400)
chr5 (6-141)||(978075-978210)
chr5 (6-102)||(9502756-9502852)
chr5 (6-139)||(33387220-33387353)
chr5 (19-139)||(33587611-33587731)
chr5 (41-124)||(36240095-36240178)
chr5 (6-139)||(8086159-8086292)
chr5 (41-128)||(37495621-37495708)
chr5 (6-128)||(14634286-14634408)
chr5 (19-81)||(18998745-18998807)
chr5 (29-139)||(39776630-39776740)
chr5 (19-80)||(11761125-11761186)
chr5 (19-83)||(3472419-3472483)
chr5 (19-128)||(24916388-24916499)
chr5 (6-142)||(40156195-40156331)
chr5 (19-82)||(26387021-26387084)
chr5 (28-83)||(27579581-27579636)
chr5 (19-141)||(12007774-12007896)
chr5 (22-67)||(3422355-3422400)
chr5 (34-139)||(38916407-38916512)
chr5 (19-139)||(18094223-18094343)
chr5 (19-67)||(32400399-32400447)
chr5 (34-125)||(4671223-4671314)
chr5 (6-65)||(30355003-30355062)
chr5 (57-123)||(7750066-7750132)
chr5 (47-128)||(10696801-10696883)
chr5 (28-102)||(34111999-34112073)
chr5 (6-83)||(7224221-7224298)
chr5 (52-109)||(8627164-8627221)
chr5 (34-67)||(12359978-12360011)
chr5 (37-98)||(31197850-31197911)
chr5 (34-102)||(11251151-11251219)
[»] chr7 (44 HSPs)
chr7 (6-139)||(41897988-41898121)
chr7 (19-139)||(6766692-6766812)
chr7 (6-142)||(48602433-48602569)
chr7 (19-128)||(4131645-4131754)
chr7 (6-139)||(20885103-20885236)
chr7 (6-139)||(28061644-28061777)
chr7 (6-139)||(36623308-36623441)
chr7 (22-139)||(41088587-41088704)
chr7 (6-139)||(47156027-47156160)
chr7 (19-141)||(42877384-42877506)
chr7 (6-128)||(42890472-42890594)
chr7 (36-141)||(3785518-3785623)
chr7 (6-139)||(38851976-38852109)
chr7 (21-128)||(35570193-35570305)
chr7 (36-124)||(36515854-36515942)
chr7 (6-102)||(40090047-40090143)
chr7 (17-128)||(7457862-7457972)
chr7 (19-81)||(27045550-27045612)
chr7 (6-139)||(16778505-16778638)
chr7 (6-102)||(39130055-39130151)
chr7 (6-102)||(44732049-44732145)
chr7 (19-83)||(46103512-46103576)
chr7 (29-123)||(16870632-16870726)
chr7 (6-128)||(40256068-40256190)
chr7 (37-123)||(49110630-49110716)
chr7 (34-123)||(8683834-8683923)
chr7 (39-84)||(38767221-38767266)
chr7 (6-102)||(2198639-2198735)
chr7 (19-123)||(49101955-49102059)
chr7 (19-70)||(4048876-4048927)
chr7 (34-81)||(37467464-37467511)
chr7 (6-108)||(46479860-46479962)
chr7 (34-123)||(47525993-47526083)
chr7 (6-83)||(7438959-7439036)
chr7 (19-84)||(11502722-11502787)
chr7 (19-140)||(32431500-32431621)
chr7 (23-99)||(6174876-6174952)
chr7 (41-128)||(42662198-42662284)
chr7 (41-140)||(46322129-46322228)
chr7 (6-83)||(5788506-5788583)
chr7 (19-128)||(25566690-25566798)
chr7 (41-81)||(7169184-7169224)
chr7 (20-128)||(36341631-36341739)
chr7 (6-102)||(36585146-36585242)
[»] chr6 (36 HSPs)
chr6 (19-132)||(28477760-28477873)
chr6 (6-139)||(32414808-32414941)
chr6 (19-139)||(17213926-17214046)
chr6 (19-139)||(29790206-29790326)
chr6 (29-123)||(14214065-14214159)
chr6 (19-141)||(24624083-24624205)
chr6 (19-128)||(15337499-15337608)
chr6 (6-139)||(18668817-18668950)
chr6 (6-139)||(19088087-19088220)
chr6 (23-128)||(31869719-31869824)
chr6 (6-142)||(6563223-6563359)
chr6 (6-145)||(20226427-20226566)
chr6 (6-145)||(22120411-22120550)
chr6 (20-102)||(4440887-4440969)
chr6 (22-132)||(29693890-29694000)
chr6 (29-102)||(10298725-10298798)
chr6 (19-84)||(23158051-23158116)
chr6 (6-139)||(32671816-32671949)
chr6 (19-139)||(4147931-4148051)
chr6 (20-128)||(17155160-17155268)
chr6 (6-128)||(15383059-15383181)
chr6 (6-128)||(22054783-22054905)
chr6 (19-139)||(17257793-17257913)
chr6 (28-79)||(1260490-1260541)
chr6 (23-81)||(3623856-3623913)
chr6 (19-77)||(5495311-5495369)
chr6 (6-83)||(24955525-24955602)
chr6 (6-102)||(1040861-1040957)
chr6 (23-71)||(8101668-8101716)
chr6 (28-84)||(19240743-19240799)
chr6 (19-102)||(2360027-2360110)
chr6 (41-132)||(21540793-21540884)
chr6 (6-123)||(3989393-3989509)
chr6 (19-123)||(20437155-20437260)
chr6 (48-84)||(6188634-6188670)
chr6 (29-84)||(26567296-26567352)
[»] scaffold0595 (1 HSPs)
scaffold0595 (28-123)||(3964-4059)
[»] scaffold0225 (1 HSPs)
scaffold0225 (19-110)||(8975-9066)
[»] scaffold0029 (1 HSPs)
scaffold0029 (19-110)||(138172-138263)
[»] scaffold0018 (1 HSPs)
scaffold0018 (6-128)||(67898-68020)
[»] scaffold0003 (1 HSPs)
scaffold0003 (19-139)||(161979-162099)
[»] scaffold0262 (1 HSPs)
scaffold0262 (19-110)||(22809-22900)
[»] scaffold0099 (1 HSPs)
scaffold0099 (34-123)||(28809-28899)
[»] scaffold0022 (1 HSPs)
scaffold0022 (6-139)||(100776-100909)
[»] scaffold0295 (1 HSPs)
scaffold0295 (6-102)||(13846-13942)
[»] scaffold0009 (2 HSPs)
scaffold0009 (19-85)||(53562-53628)
scaffold0009 (19-128)||(217017-217127)
[»] scaffold0056 (1 HSPs)
scaffold0056 (19-139)||(70961-71080)
[»] scaffold0608 (1 HSPs)
scaffold0608 (28-85)||(1574-1631)


Alignment Details
Target: chr8 (Bit Score: 301; Significance: 1e-169; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 19 - 331
Target Start/End: Original strand, 40204864 - 40205176
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatg 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40204864 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatg 40204963  T
Q  119 tatttagaaatagagggagtagtaattaatgactcatttgctctgtaaactagagaaacttttggtgttatcttacatacatgttaaacatgagtacgtg 218  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  40204964 tatttagaaatagagggagtagtaattaatgacccatttgctttgtaaactagagaaacttttggtgttatcttacatacatgttagacatgagtacgtg 40205063  T
Q  219 aagaactttgtaaaatttgaactgttaatgcattcttctaaatacacattaaaatgataaatacatttattactactcttttcttcatttccacgtattg 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40205064 aagaactttgtaaaatttgaactgttaatgcattcttctaaatacacattaaaatgataaatacatttattactactcttttcttcatttccacgtattg 40205163  T
Q  319 gaatagtagtact 331  Q
    |||||||||||||    
T  40205164 gaatagtagtact 40205176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 146
Target Start/End: Complemental strand, 616916 - 616776
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| |||||||||||||||||||| ||||| |||| |||||||||||    |||||||||||||||  |    
T  616916 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgca 616817  T
Q  106 aaattacgacatgtatttagaaatagagggagtagtaatta 146  Q
    ||| |  ||||||||||| ||||  ||||||||| ||||||    
T  616816 aaaattggacatgtattttgaaacggagggagtattaatta 616776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 139
Target Start/End: Complemental strand, 623309 - 623176
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| |||||||||||||||||||| ||||| |||| |||||||||||    |||||||||||||||  |    
T  623309 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgca 623210  T
Q  106 aaattacgacatgtatttagaaatagagggagta 139  Q
    ||| |  ||||||||||| ||||  |||||||||    
T  623209 aaaattggacatgtattttgaaacggagggagta 623176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 33700215 - 33700336
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaa-attacgacat 117  Q
    |||||||| ||||| | ||||||||||||||||||||||||| |||||||||| |||||||||| |   |||||||||| |||| ||||  || ||||||    
T  33700215 aaacaacatcttacttactaacatttgtatttatatattagttaaaaaatatggtcaaagtaagctatgtgaatagtgcgcattgtaaattttgcgacat 33700314  T
Q  118 gtatttagaaatagagggagta 139  Q
    |||||| ||||  |||||||||    
T  33700315 gtattttgaaacggagggagta 33700336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 14237413 - 14237291
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| ||||||||||||| |||||| |||||||||| |||||||||||    |||||||||||||||  |    
T  14237413 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgca 14237314  T
Q  106 aaattacgacatgtatttagaaa 128  Q
    ||| |  ||||||||||| ||||    
T  14237313 aaaattggacatgtattttgaaa 14237291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 18044558 - 18044436
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| ||||||||||||| |||||| |||||||||| |||||||||||    |||||||||||||||  |    
T  18044558 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgca 18044459  T
Q  106 aaattacgacatgtatttagaaa 128  Q
    ||| |  ||||||||||| ||||    
T  18044458 aaaattggacatgtattttgaaa 18044436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 32998583 - 32998461
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| ||||||||||||| |||||| |||||||||| |||||||||||    |||||||||||||||  |    
T  32998583 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgca 32998484  T
Q  106 aaattacgacatgtatttagaaa 128  Q
    ||| |  ||||||||||| ||||    
T  32998483 aaaattggacatgtattttgaaa 32998461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 40494517 - 40494395
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| |||||||||||||||||||| ||||| |||| |||||||||||    |||||||||||||||  |    
T  40494517 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgga 40494418  T
Q  106 aaattacgacatgtatttagaaa 128  Q
    ||| |  ||||||||||| ||||    
T  40494417 aaaattggacatgtattttgaaa 40494395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 139
Target Start/End: Complemental strand, 41263943 - 41263810
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| ||||||||||||| |||||| |||||||||| |||||||||||    |||||||||||||||  |    
T  41263943 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgca 41263844  T
Q  106 aaattacgacatgtatttagaaatagagggagta 139  Q
    ||| |  || |||||||| ||||| ||| |||||    
T  41263843 aaaattggatatgtattttgaaatggagagagta 41263810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 139
Target Start/End: Original strand, 42587377 - 42587510
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| ||||||||||||| |||||| ||||| |||| |||||||||||    |||||||||||||||  |    
T  42587377 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgca 42587476  T
Q  106 aaattacgacatgtatttagaaatagagggagta 139  Q
    ||| |  ||||||||||| ||||  |||||||||    
T  42587477 aaaattggacatgtattttgaaacggagggagta 42587510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 132150 - 132073
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagt 83  Q
    ||||||| | || |||||||| ||||| |||||| ||||||||||||| |||||| |||||||||| |||||||||||    
T  132150 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatgatcaaagtaagt 132073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 28 - 145
Target Start/End: Complemental strand, 5878427 - 5878311
Alignment:
Q  28 cttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtatttagaa 127  Q
    ||||| |||||| ||||||||||||| |||||| |||||||||| |||||||||||    |||||||||||||||  |||| |  ||||||||||| |||    
T  5878427 cttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaat-ggacatgtatttggaa 5878329  T
Q  128 atagagggagtagtaatt 145  Q
    |  ||||||||| |||||    
T  5878328 acggagggagtactaatt 5878311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 119
Target Start/End: Original strand, 11162416 - 11162500
Alignment:
Q  34 tgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgt 119  Q
    ||||||||||||| ||||||||||||| |||||||||| |||||||| |||  || |||||||||  |  ||||||||||||||||    
T  11162416 tgctaacatttgtctttatatattagt-aaaaaatatggtcaaagtatgttttattaatagtgcaattgctaaaattacgacatgt 11162500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 18090447 - 18090348
Alignment:
Q  20 aacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgt 119  Q
    ||||||| ||||  ||||||||||| ||||||||||||||| |||||||||| ||||| |||||   || |||||||||||||  |||| | ||||||||    
T  18090447 aacaacatcttatatgctaacatttatatttatatattagttaaaaaatatgatcaaa-taagtcatataaatagtgcacattgaaaaaattcgacatgt 18090349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 129
Target Start/End: Original strand, 13216850 - 13216973
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||| | |||||| |||| |||||||| |||||| ||||| |||| |||||||||||    |||||||||||||||  |    
T  13216850 gtcgagacaaatcaaacaacatctttcatgctaatatttatatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgca 13216949  T
Q  106 aaattacgacatgtatttagaaat 129  Q
    ||| |  ||||||||||| |||||    
T  13216950 aaaattagacatgtattttgaaat 13216973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 140
Target Start/End: Original strand, 36641987 - 36642122
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaat-atgttcaaagtaagttggatgaatagtgcacatttt 104  Q
    ||||||| | || |||||||| ||||| |||||| |||||||||||||||| ||| ||||| | ||| |||||||||||    |||||||||||||||      
T  36641987 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatataagttaaaaagtaatggtcaaagtaagtcaagtgaatagtgcacattgc 36642086  T
Q  105 aaaattacgacatgtatttagaaatagagggagtag 140  Q
    |||| |   |||||||||| ||||  ||||||||||    
T  36642087 aaaaattgaacatgtattttgaaacggagggagtag 36642122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 81
Target Start/End: Complemental strand, 38957303 - 38957228
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaa 81  Q
    ||||||| | || |||||||| ||||| |||||| |||||||||||||  ||||| |||||||||| |||||||||    
T  38957303 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacgttagttaaaaaatatggtcaaagtaa 38957228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 3370416 - 3370462
Alignment:
Q  37 taacatttgtatttatatattagtcaaaaaatatgttcaaagtaagt 83  Q
    |||||||||||||||||||||| | |||||||||| |||||||||||    
T  3370416 taacatttgtatttatatattaattaaaaaatatggtcaaagtaagt 3370462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 123
Target Start/End: Original strand, 4270256 - 4270338
Alignment:
Q  41 atttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtattt 123  Q
    ||||||||||||| |||||| |||||||||| |||||||||||    |||||||||||||||  |||| |  |||||||||||    
T  4270256 atttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattacaaaaattggacatgtattt 4270338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 40716665 - 40716715
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaata 69  Q
    |||||||| ||||| |||||| |||||||||||||||||||| ||||||||    
T  40716665 aaacaacatcttacatgctaaaatttgtatttatatattagttaaaaaata 40716715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 139
Target Start/End: Complemental strand, 8394479 - 8394346
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||  | |||| ||||||| ||||| |||||| ||||||| || |||||||||||    |||||||||||||||  |    
T  8394479 gtcgagacaaatcaaacaacatcttaaatactaatatttgtacttatacattagttaaaaaatttggtcaaagtaagtcaagtgaatagtgcacattgca 8394380  T
Q  106 aaattacgacatgtatttagaaatagagggagta 139  Q
    ||| |  ||||||||||| ||||  |||||||||    
T  8394379 aaaattagacatgtattttgaaacggagggagta 8394346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 18035220 - 18035163
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaa 76  Q
    |||||||| ||||| |||||||||||| |||||||||||||| ||||| |||| ||||    
T  18035220 aaacaacatcttacatgctaacatttgcatttatatattagttaaaaattatggtcaa 18035163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 2766190 - 2766254
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagt 83  Q
    |||||||| ||||| |||||| |||| |||||||| |||||| ||||| |||| |||||||||||    
T  2766190 aaacaacatcttacatgctaatatttatatttatacattagttaaaaagtatggtcaaagtaagt 2766254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 102
Target Start/End: Complemental strand, 5173384 - 5173288
Alignment:
Q  7 tcgagagagatgaaac-aacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatt 102  Q
    |||||| | ||||||| |||| ||||| || ||| |||||||||||||||||||| ||| |||||| ||||||||| |   ||||||||| ||||||    
T  5173384 tcgagataaatgaaactaacatcttacatgttaatatttgtatttatatattagttaaataatatgatcaaagtaaatcatatgaatagtacacatt 5173288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 3100640 - 3100699
Alignment:
Q  22 caacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaa 81  Q
    ||||| ||||| |||||| ||||||||||||| |||||| ||||| |||| |||||||||    
T  3100640 caacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaa 3100699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 22489433 - 22489499
Alignment:
Q  36 ctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatt 102  Q
    |||| ||||||||||||| |||||| ||||| |||| |||||||||||    |||||||||||||||    
T  22489433 ctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacatt 22489499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 35403649 - 35403527
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| || ||| || |||||||||| |||||| ||||| |||| |||||||| ||    |||||||||||||||  |    
T  35403649 gtcgagacaaattaaacaacatcttacatgttaatatctgtatttatacattagttaaaaagtatggtcaaagtatgtcaagtgaatagtgcacattgca 35403550  T
Q  106 aaattacgacatgtatttagaaa 128  Q
    ||| |  ||||||||||| ||||    
T  35403549 aaaattggacatgtattttgaaa 35403527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 32855604 - 32855640
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatata 55  Q
    |||||||| ||||| ||||||||||||||||||||||    
T  32855604 aaacaacatcttacatgctaacatttgtatttatata 32855640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 2e-31; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 34 - 139
Target Start/End: Complemental strand, 42133857 - 42133752
Alignment:
Q  34 tgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtatttagaaatagag 133  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||  |  ||||||||||||||||||||||||||||||||||||| |||||  ||    
T  42133857 tgctaacatttgtatttatatattagttaaaaaatatgatcaaagtaaactatatgaatagtgcacattttaaaattacgacatgtattttgaaatgaag 42133758  T
Q  134 ggagta 139  Q
    ||||||    
T  42133757 ggagta 42133752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 128
Target Start/End: Complemental strand, 11931811 - 11931702
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatg 118  Q
    |||||||| ||||  ||||||||||||||||||||||||||| |||||||||| ||||||||||||  ||||||| |||| ||| ||||||| |||||||    
T  11931811 aaacaacatcttaaatgctaacatttgtatttatatattagttaaaaaatatggtcaaagtaagttatatgaataatgcatattgtaaaattgcgacatg 11931712  T
Q  119 tatttagaaa 128  Q
    ||||| ||||    
T  11931711 tattttgaaa 11931702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 139
Target Start/End: Original strand, 9006941 - 9007046
Alignment:
Q  34 tgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtatttagaaatagag 133  Q
    |||||||||||||||||||| |||||| |||||||||| |||||||||| |  ||||||| |||||||| ||||||| |||||||||||| ||||| ||     
T  9006941 tgctaacatttgtatttataaattagttaaaaaatatggtcaaagtaagctacatgaataatgcacattgtaaaattgcgacatgtattttgaaatggat 9007040  T
Q  134 ggagta 139  Q
    ||||||    
T  9007041 ggagta 9007046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 28 - 129
Target Start/End: Original strand, 43444691 - 43444792
Alignment:
Q  28 cttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtatttagaa 127  Q
    ||||| ||||||||||||||||||||||||||| |||||||||| |||||| || ||   |||||| |||||||| ||||||| |||||||||||| |||    
T  43444691 cttacatgctaacatttgtatttatatattagttaaaaaatatggtcaaagaaaattatgtgaataatgcacattgtaaaattgcgacatgtattttgaa 43444790  T
Q  128 at 129  Q
    ||    
T  43444791 at 43444792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 128
Target Start/End: Complemental strand, 7799967 - 7799858
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatg 118  Q
    |||||||| ||||| ||||||||||||||||||||||||||| ||||| || | |||||||||||    |||||||||||||||  |||| | |||||||    
T  7799967 aaacaacatcttacatgctaacatttgtatttatatattagttaaaaagtagggtcaaagtaagtcatgtgaatagtgcacattgcaaaaatgcgacatg 7799868  T
Q  119 tatttagaaa 128  Q
    ||||| ||||    
T  7799867 tattttgaaa 7799858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 139
Target Start/End: Original strand, 8042151 - 8042284
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| |||||||||||||||||||| ||||| |||| |||||||||||    |||||||||||||||  |    
T  8042151 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgca 8042250  T
Q  106 aaattacgacatgtatttagaaatagagggagta 139  Q
    ||| |  ||||||||||| ||||  |||||||||    
T  8042251 aaaattggacatgtattttgaaacggagggagta 8042284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 139
Target Start/End: Original strand, 19141195 - 19141328
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| |||||||||||||||||||| ||||| |||| |||||||||||    |||||||||||||||  |    
T  19141195 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgca 19141294  T
Q  106 aaattacgacatgtatttagaaatagagggagta 139  Q
    ||| |  ||||||||||| ||||  |||||||||    
T  19141295 aaaattggacatgtattttgaaacggagggagta 19141328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 28 - 128
Target Start/End: Complemental strand, 19262791 - 19262691
Alignment:
Q  28 cttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtatttagaa 127  Q
    ||||| |||||| |||||||||||||||||||| |||||||||| ||||||||||||  || |||||||||||||  |||| |  ||||||||||| |||    
T  19262791 cttacatgctaatatttgtatttatatattagttaaaaaatatggtcaaagtaagttaaataaatagtgcacattgaaaaaattggacatgtattttgaa 19262692  T
Q  128 a 128  Q
    |    
T  19262691 a 19262691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 137
Target Start/End: Complemental strand, 5405129 - 5404998
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| |||||||||||||||||||| ||||| |||| |||||||||||    |||||||||||||||  |    
T  5405129 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgca 5405030  T
Q  106 aaattacgacatgtatttagaaatagagggag 137  Q
    ||| |  ||||||||||| ||||  |||||||    
T  5405029 aaaattggacatgtattttgaaacggagggag 5404998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 16865173 - 16865054
Alignment:
Q  20 aacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgt 119  Q
    ||||||||||||| ||||||||||||||||||||| ||||| ||||| |||  |||||||||||   ||||||| || | ||| ||||| | ||||||||    
T  16865173 aacaacaacttacatgctaacatttgtatttatatgttagttaaaaagtatcgtcaaagtaagtcatatgaatattgtatattgtaaaaatgcgacatgt 16865074  T
Q  120 atttagaaatagagggagta 139  Q
    ||||  |||||||| |||||    
T  16865073 attttaaaatagagtgagta 16865054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 7608182 - 7608060
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| |||||||||||||||||||| ||||| |||| |||||||||||    |||||||||||||||  |    
T  7608182 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgca 7608083  T
Q  106 aaattacgacatgtatttagaaa 128  Q
    ||| |  ||||||||||| ||||    
T  7608082 aaaattggacatgtattttgaaa 7608060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 123
Target Start/End: Original strand, 11841722 - 11841839
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| ||||||||||||| |||||| ||||| |||| |||||||||||   ||||||||||||||||  |    
T  11841722 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgca 11841821  T
Q  106 aaattacgacatgtattt 123  Q
    ||| |  |||||||||||    
T  11841822 aaaattggacatgtattt 11841839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 102
Target Start/End: Complemental strand, 6223199 - 6223103
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatt 102  Q
    ||||||| | || ||||| || ||||| |||||| |||||||||||||||||||| |||||||||| |||||||||||    |||||||||||||||    
T  6223199 gtcgagacaaatcaaacatcatcttacatgctaatatttgtatttatatattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacatt 6223103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 34 - 120
Target Start/End: Original strand, 44563154 - 44563241
Alignment:
Q  34 tgctaacatttgtatttatatattagtcaaaaaa-tatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgta 120  Q
    ||||||||| ||||||||||||||| | |||||| |||| ||||||||||||  |||||||||||| ||| ||||||| |||||||||    
T  44563154 tgctaacatatgtatttatatattaattaaaaaaatatgatcaaagtaagttatatgaatagtgcatattataaaattgcgacatgta 44563241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 129
Target Start/End: Complemental strand, 36072290 - 36072184
Alignment:
Q  23 aacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtatt 122  Q
    |||| ||||| |||||| |||| |||||||| |||||| |||||||||| |||||||||||   |||||||||||| ||| ||||| |  ||||||||||    
T  36072290 aacatcttacatgctaatatttatatttatacattagttaaaaaatatgatcaaagtaagtcaaatgaatagtgcatattgtaaaaattggacatgtatt 36072191  T
Q  123 tagaaat 129  Q
    | |||||    
T  36072190 ttgaaat 36072184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 38292072 - 38292007
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagtt 84  Q
    |||||||| ||||| || ||||||||||||||||||| |||| |||||||||| ||||||||||||    
T  38292072 aaacaacatcttacatgttaacatttgtatttatatactagttaaaaaatatggtcaaagtaagtt 38292007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 139
Target Start/End: Complemental strand, 39358279 - 39358146
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || ||| |||| ||||| |||||| ||||||||||||| |||||| ||||| |||| |||||||||||    |||||||||||||||  |    
T  39358279 gtcgagacaaatcaaagaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgca 39358180  T
Q  106 aaattacgacatgtatttagaaatagagggagta 139  Q
    ||| |  ||||||||||| ||||  |||||||||    
T  39358179 aaaattggacatgtattttgaaacggagggagta 39358146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 9172288 - 9172352
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagt 83  Q
    |||||||| ||||| ||||||| |||||||||||| |||||| |||||||||| |||||||||||    
T  9172288 aaacaacatcttacatgctaacttttgtatttatacattagttaaaaaatatggtcaaagtaagt 9172352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 22839069 - 22839152
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatt 102  Q
    |||||||| ||||  |||||||||||  ||||||||| |||| |||||||||| ||||||||||||   |||||||||||||||    
T  22839069 aaacaacatcttatatgctaacattttaatttatatactagttaaaaaatatggtcaaagtaagttatgtgaatagtgcacatt 22839152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 84
Target Start/End: Complemental strand, 24252070 - 24252015
Alignment:
Q  29 ttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagtt 84  Q
    |||| ||||||||||||||||||||||||||| |||||||||| ||||| ||||||    
T  24252070 ttacatgctaacatttgtatttatatattagttaaaaaatatggtcaaaataagtt 24252015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 31610795 - 31610897
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatg 118  Q
    |||||||  ||||| | ||||||||||||||||||||||||| |||||| ||| | ||| ||||||   ||||||||||||| | |||| || |||||||    
T  31610795 aaacaacgtcttacattctaacatttgtatttatatattagttaaaaaaaatggtaaaaataagttatgtgaatagtgcacaatataaatttgcgacatg 31610894  T
Q  119 tat 121  Q
    |||    
T  31610895 tat 31610897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 44365290 - 44365168
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| ||||||||||||| |||||| ||||| |||| |||||||||||    ||||||||||| |||  |    
T  44365290 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcatattgca 44365191  T
Q  106 aaattacgacatgtatttagaaa 128  Q
    ||| |  ||||||||||| ||||    
T  44365190 aaaattggacatgtattttgaaa 44365168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 76
Target Start/End: Complemental strand, 38839205 - 38839136
Alignment:
Q  7 tcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaa 76  Q
    |||||||| || | |||||| ||||  ||||||||||||||||||||||||||| |||||||||| ||||    
T  38839205 tcgagagaaatcatacaacatcttatatgctaacatttgtatttatatattagttaaaaaatatggtcaa 38839136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 23 - 139
Target Start/End: Original strand, 2183103 - 2183219
Alignment:
Q  23 aacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtatt 122  Q
    |||| ||||| |||||| ||||||||| ||| |||||| ||||| |||| |||||||||||    |||||||||||||||  |||| |  ||||||||||    
T  2183103 aacatcttacatgctaatatttgtattcatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtatt 2183202  T
Q  123 tagaaatagagggagta 139  Q
    | ||||  |||||||||    
T  2183203 ttgaaacggagggagta 2183219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 128
Target Start/End: Complemental strand, 33607474 - 33607387
Alignment:
Q  41 atttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtatttagaaa 128  Q
    ||||||||||||| |||||| ||||| |||  |||||||||||   |||||||||||||||| ||||| |  ||||||||||| ||||    
T  33607474 atttgtatttatacattagttaaaaagtataatcaaagtaagtcaaatgaatagtgcacattgtaaaaattggacatgtattttgaaa 33607387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 112
Target Start/End: Complemental strand, 7666191 - 7666117
Alignment:
Q  38 aacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattac 112  Q
    |||| |||||||||||||||||  |||| ||||| ||||||||| ||  ||||||| |||||||| |||||||||    
T  7666191 aacaattgtatttatatattagataaaatatatggtcaaagtaaattatatgaataatgcacattataaaattac 7666117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 123
Target Start/End: Original strand, 31904031 - 31904126
Alignment:
Q  28 cttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtattt 123  Q
    ||||| || ||| |||| ||||||||||||||| |||||||||| ||| |||||| |   ||||||||| ||| | ||||||| ||| ||||||||    
T  31904031 cttacgtgataatatttatatttatatattagttaaaaaatatggtcagagtaagctatgtgaatagtgtacagtataaaattgcgatatgtattt 31904126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 3013839 - 3013884
Alignment:
Q  20 aacaacaacttacctgctaacatttgtatttatatattagtcaaaa 65  Q
    ||||||||||| | ||||| ||||||||||||||||||||| ||||    
T  3013839 aacaacaacttgcatgctagcatttgtatttatatattagttaaaa 3013884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 13117483 - 13117548
Alignment:
Q  36 ctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacat 101  Q
    |||| |||| ||||||||||| ||| |||||||||| ||||||||||||  || || |||||||||    
T  13117483 ctaatatttatatttatatatcagttaaaaaatatggtcaaagtaagttatataaacagtgcacat 13117548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 13125302 - 13125351
Alignment:
Q  34 tgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagt 83  Q
    |||||| ||||||||||||| |||||| |||||||||| | |||||||||    
T  13125302 tgctaatatttgtatttatacattagttaaaaaatatggtgaaagtaagt 13125351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 84
Target Start/End: Complemental strand, 4835757 - 4835709
Alignment:
Q  37 taacatttgtatttatatattag-tcaaaaaatatgttcaaagtaagtt 84  Q
    ||||||||||||||||||||||| | |||||||||||| ||||| ||||    
T  4835757 taacatttgtatttatatattagttaaaaaaatatgtttaaagtgagtt 4835709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 125
Target Start/End: Complemental strand, 40618910 - 40618823
Alignment:
Q  37 taacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtatttag 125  Q
    |||||||||||||||||||||| | |||||||||| | ||| ||||||  || |||| |||| ||  ||||| | ||||||||||||||    
T  40618910 taacatttgtatttatatatta-ttaaaaaatatgattaaattaagttatattaataatgcatatgataaaactgcgacatgtatttag 40618823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 4e-26; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 3485349 - 3485453
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatg 118  Q
    |||||||| ||||| || |||||||||||||||||||||||| |||||||||| ||||||||||||    |||||||||| ||| |||||||||||||||    
T  3485349 aaacaacaccttacatgataacatttgtatttatatattagttaaaaaatatgatcaaagtaagttatgcgaatagtgcatattgtaaaattacgacatg 3485448  T
Q  119 tattt 123  Q
    |||||    
T  3485449 tattt 3485453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 23 - 139
Target Start/End: Original strand, 30385291 - 30385407
Alignment:
Q  23 aacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtatt 122  Q
    |||| ||||| | ||||||||||||||||||||||||| |||||||||| |||||||||  |   ||||||||||||||| ||||||| |||||||||||    
T  30385291 aacatcttacatactaacatttgtatttatatattagttaaaaaatatggtcaaagtaaactatgtgaatagtgcacattataaaattgcgacatgtatt 30385390  T
Q  123 tagaaatagagggagta 139  Q
    |  ||||||| ||||||    
T  30385391 ttaaaatagatggagta 30385407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 6 - 139
Target Start/End: Original strand, 11641196 - 11641329
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| |||||||||||||||||||| ||||| |||| |||||||||||    |||||||||||||||  |    
T  11641196 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgca 11641295  T
Q  106 aaattacgacatgtatttagaaatagagggagta 139  Q
    ||| |  ||||||||||| ||||| |||||||||    
T  11641296 aaaattggacatgtattttgaaatggagggagta 11641329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 139
Target Start/End: Original strand, 36757615 - 36757748
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| |||||||||||||||||||| ||||| |||| |||||||||||    |||||||||||||||  |    
T  36757615 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgca 36757714  T
Q  106 aaattacgacatgtatttagaaatagagggagta 139  Q
    ||| |  ||||||||||| ||||| || ||||||    
T  36757715 aaaattggacatgtattttgaaatggatggagta 36757748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 40800529 - 40800649
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaa-tatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacat 117  Q
    |||||||| ||||| |||||||||||||||| |||||||||| |||||| |||| ||||||||||||   ||| || |||||||| ||||||||||||||    
T  40800529 aaacaacatcttacatgctaacatttgtatt-atatattagttaaaaaaatatggtcaaagtaagttatgtgattaatgcacattgtaaaattacgacat 40800627  T
Q  118 gtatttagaaatagagggagta 139  Q
     ||||| ||||| ||| |||||    
T  40800628 atattttgaaatggagagagta 40800649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 139
Target Start/End: Original strand, 6402539 - 6402672
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| |||||||||||||||||||| ||||| |||| ||||| |||||    |||||||||||||||  |    
T  6402539 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaaataagtcaagtgaatagtgcacattgca 6402638  T
Q  106 aaattacgacatgtatttagaaatagagggagta 139  Q
    ||| |  ||||||||||| ||||  |||||||||    
T  6402639 aaaattggacatgtattttgaaacggagggagta 6402672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 139
Target Start/End: Original strand, 40771901 - 40772034
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| ||||||||||||| |||||| ||||| |||| ||||||||| |    ||||||||||||||| ||    
T  40771901 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaaatcaagtgaatagtgcacattgta 40772000  T
Q  106 aaattacgacatgtatttagaaatagagggagta 139  Q
    ||| |  ||||||||||| ||||  |||||||||    
T  40772001 aaaattggacatgtattttgaaacggagggagta 40772034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 22575729 - 22575792
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaag 82  Q
    |||||||| ||||| ||||||||||||||||||||||||||| |||||||||| | ||||||||    
T  22575729 aaacaacatcttacatgctaacatttgtatttatatattagttaaaaaatatgatgaaagtaag 22575792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 44647856 - 44647975
Alignment:
Q  20 aacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgt 119  Q
    ||||||| ||||| |||||||||||||||||||||||| || |||||||||| ||||| |||||    |||||| | ||||||  |||| | ||||||||    
T  44647856 aacaacatcttacatgctaacatttgtatttatatatttgttaaaaaatatgatcaaaataagtcatgtgaataatacacattgaaaaaatgcgacatgt 44647955  T
Q  120 atttagaaatagagggagta 139  Q
    ||||  |||| |||||||||    
T  44647956 attttaaaatggagggagta 44647975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 125
Target Start/End: Complemental strand, 16689920 - 16689838
Alignment:
Q  43 ttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtatttag 125  Q
    |||||||||||||||||| | |||||||| ||||||||||||   ||||||||||||||  ||||||| | ||||||||||||    
T  16689920 ttgtatttatatattagttagaaaatatgatcaaagtaagttatgtgaatagtgcacatcgtaaaattgctacatgtatttag 16689838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 9342774 - 9342851
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagt 83  Q
    ||||||| | || |||||||| ||||| |||||| ||||||||||||| |||||| |||||||||| |||||||||||    
T  9342774 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatgatcaaagtaagt 9342851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 19 - 128
Target Start/End: Original strand, 15382568 - 15382677
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatg 118  Q
    |||||||| ||||| | |||| |||||||||||||||||| | ||||||  || ||| ||||||||   ||||||||| ||||| ||||||| |||||||    
T  15382568 aaacaacatcttacatactaatatttgtatttatatattatttaaaaaaattggtcagagtaagttatgtgaatagtgtacattgtaaaattgcgacatg 15382667  T
Q  119 tatttagaaa 128  Q
    ||||| ||||    
T  15382668 tattttgaaa 15382677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 19 - 128
Target Start/End: Complemental strand, 30003653 - 30003544
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatg 118  Q
    |||||||| ||||| |||||| ||||||||||||| |||||| ||||| |||| |||||||||||    |||||||||||||||  |||| |  ||||||    
T  30003653 aaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattacaaaaattggacatg 30003554  T
Q  119 tatttagaaa 128  Q
    ||||| ||||    
T  30003553 tattttgaaa 30003544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 139
Target Start/End: Complemental strand, 30701851 - 30701718
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| |||||  ||||| ||||||||||||| |||||| ||||| |||| |||||||||||    |||||||||||||||  |    
T  30701851 gtcgagacaaatcaaacaacatcttacacgctaatatttgtatttatacattagttaaaaattatggtcaaagtaagtcaagtgaatagtgcacattaca 30701752  T
Q  106 aaattacgacatgtatttagaaatagagggagta 139  Q
    ||| |  ||||||||||| ||||  |||||||||    
T  30701751 aaaattggacatgtattttgaaacggagggagta 30701718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 139
Target Start/End: Original strand, 42788671 - 42788804
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| ||| || ||||||||||||| |||||| ||||| |||| |||||||||||    |||||||||||||||  |    
T  42788671 gtcgagacaaatcaaacaacatcttacatgcaaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattaca 42788770  T
Q  106 aaattacgacatgtatttagaaatagagggagta 139  Q
    ||| |  ||||| ||||| ||||| |||||||||    
T  42788771 aaaattggacatatattttgaaatggagggagta 42788804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 34 - 139
Target Start/End: Original strand, 44644512 - 44644617
Alignment:
Q  34 tgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtatttagaaatagag 133  Q
    |||||||||||||||||||||||| || |||||||||| |||||||||||    |||||| | ||||||  |||| | ||||||||||||  |||| |||    
T  44644512 tgctaacatttgtatttatatatttgttaaaaaatatgatcaaagtaagtcatgtgaataatacacattgaaaaaatgcgacatgtattttaaaatggag 44644611  T
Q  134 ggagta 139  Q
    ||||||    
T  44644612 ggagta 44644617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 139
Target Start/End: Complemental strand, 6766488 - 6766372
Alignment:
Q  23 aacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtatt 122  Q
    |||| ||||| |||||| |||||||||||||||||||| ||||| |||| |||||||||||    |||||||||||||||  |||| |   |||||||||    
T  6766488 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattgaacatgtatt 6766389  T
Q  123 tagaaatagagggagta 139  Q
    | ||||  |||||||||    
T  6766388 ttgaaacggagggagta 6766372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 16120582 - 16120702
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatg 118  Q
    |||||||| ||||| |||||| ||||||||||||| |||||| ||||| |||| |||||||||||    |||||| ||||||||  |||| |  ||||||    
T  16120582 aaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacattgcaaaaattggacatg 16120681  T
Q  119 tatttagaaatagagggagta 139  Q
    ||||| ||||  |||||||||    
T  16120682 tattttgaaacggagggagta 16120702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 38153423 - 38153530
Alignment:
Q  23 aacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtatt 122  Q
    |||| ||||| || |||||||||||||||||| ||||| ||||| |||| | | |||||||    ||||||||||||||| ||||| | |||||||||||    
T  38153423 aacatcttacatgataacatttgtatttatatgttagttaaaaagtatggtaacagtaagtcatgtgaatagtgcacattataaaaatgcgacatgtatt 38153522  T
Q  123 tagaaata 130  Q
    | ||||||    
T  38153523 ttgaaata 38153530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 36399231 - 36399109
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| |||||  ||||| ||||||||||||| |||||| ||||| |||| |||||||||||    |||||||||||||||  |    
T  36399231 gtcgagacaaatcaaacaacatcttacacgctaatatttgtatttatacattagttaaaaattatggtcaaagtaagtgaagtgaatagtgcacattgca 36399132  T
Q  106 aaattacgacatgtatttagaaa 128  Q
    ||| |  ||||||||||| ||||    
T  36399131 aaaattggacatgtattttgaaa 36399109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 123
Target Start/End: Complemental strand, 17306087 - 17305970
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| |||||||||||||||||| | ||||| |||  |||||||||||    |||||||||||||||  |    
T  17306087 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattaattaaaaagtatagtcaaagtaagtcaagtgaatagtgcacattgca 17305988  T
Q  106 aaattacgacatgtattt 123  Q
    ||| |  |||||||||||    
T  17305987 aaaattggacatgtattt 17305970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 50972794 - 50972840
Alignment:
Q  37 taacatttgtatttatatattagtcaaaaaatatgttcaaagtaagt 83  Q
    |||||||||||||||||||||| | ||||| ||||||||||||||||    
T  50972794 taacatttgtatttatatattatttaaaaagtatgttcaaagtaagt 50972840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 31445043 - 31444986
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaa 76  Q
    |||||||| ||||| ||| ||||||||| ||||||||||||| |||||||||| ||||    
T  31445043 aaacaacatcttacatgcaaacatttgtgtttatatattagttaaaaaatatggtcaa 31444986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 42735294 - 42735393
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaa---tatgttcaaagtaagttggatgaatagtgcacatt 102  Q
    ||||||| | || ||||| || ||||| |||||| |||||||||||||||||||| ||||||   |||| |||||||||||    |||||||||||||||    
T  42735294 gtcgagacaaatcaaacatcatcttacatgctaatatttgtatttatatattagttaaaaaaaagtatggtcaaagtaagtcaagtgaatagtgcacatt 42735393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 139
Target Start/End: Complemental strand, 52024159 - 52024026
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| |||||  ||||| |||| |||||||| |||||| ||||| |||| |||||||||||    |||||||||||||||  |    
T  52024159 gtcgagacaaatcaaacaacatcttacacgctaatatttatatttatacattagttaaaaattatggtcaaagtaagtgaagtgaatagtgcacattgca 52024060  T
Q  106 aaattacgacatgtatttagaaatagagggagta 139  Q
    ||| |   |||||||||| ||||  |||||||||    
T  52024059 aaaattgaacatgtattttgaaacggagggagta 52024026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 15912478 - 15912582
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatg 118  Q
    |||||||| ||||| |||||| ||||||||||| | || | | ||||| |||| |||||||||||    ||||||||||||||| ||||| |  ||||||    
T  15912478 aaacaacatcttacatgctaatatttgtatttaaaaataaataaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgtaaaaattggacatg 15912577  T
Q  119 tattt 123  Q
    |||||    
T  15912578 tattt 15912582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 123
Target Start/End: Complemental strand, 24321394 - 24321275
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaa--atatgttcaaagtaagttggatgaatagtgcacattt 103  Q
    ||||||| | || |||||| | ||||| |||||| ||||||||||||| |||||| |||||  ||||| ||||||||| |    |||||||||||||||     
T  24321394 gtcgagacaaatcaaacaatatcttacatgctaatatttgtatttatacattagttaaaaattatatggtcaaagtaaatcaagtgaatagtgcacattg 24321295  T
Q  104 taaaattacgacatgtattt 123  Q
     |||| | ||||||||||||    
T  24321294 caaaaattcgacatgtattt 24321275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 34368170 - 34368114
Alignment:
Q  37 taacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaata 93  Q
    |||||||||||||||||| || || |||||||||| | ||||||||||||| |||||    
T  34368170 taacatttgtatttatatgttggtaaaaaaatatgattaaagtaagttggacgaata 34368114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 34635018 - 34634962
Alignment:
Q  28 cttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagtt 84  Q
    ||||| || |||||||||||||||||||||||| |||||||||  ||||| ||||||    
T  34635018 cttacatgttaacatttgtatttatatattagttaaaaaatattatcaaaataagtt 34634962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 40977630 - 40977690
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagt 79  Q
    |||||||| ||||| |||||| ||||||||||||| |||||| ||||| |||| |||||||    
T  40977630 aaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagt 40977690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 48375113 - 48375057
Alignment:
Q  28 cttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagtt 84  Q
    ||||| |||||| ||||||||||||| |||||| |||||||||| ||||| ||||||    
T  48375113 cttacatgctaatatttgtatttataaattagttaaaaaatatgatcaaaataagtt 48375057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 114
Target Start/End: Complemental strand, 14777152 - 14777057
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacga 114  Q
    |||||||| ||||| |  ||| |||||||||||||||  ||| |||||||||| |||||||||  |  ||||||| | |||||| |||||||||||    
T  14777152 aaacaacatcttacatattaatatttgtatttatataacagttaaaaaatatgatcaaagtaaactatatgaataatacacattgtaaaattacga 14777057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 28030832 - 28030887
Alignment:
Q  28 cttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagt 83  Q
    ||||| ||||||||||||||||||||| ||||| ||||| |||| ||||| |||||    
T  28030832 cttacatgctaacatttgtatttatatgttagttaaaaagtatggtcaaaataagt 28030887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 102
Target Start/End: Complemental strand, 26910174 - 26910113
Alignment:
Q  41 atttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatt 102  Q
    ||||||||||||| |||||| ||||| |||| |||||||||||    |||||||||||||||    
T  26910174 atttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacatt 26910113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 128
Target Start/End: Original strand, 20875389 - 20875498
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatg 118  Q
    |||||||| ||||  ||| |||||||  |||||||||||||| |||||||||| ||||||||| ||  |||||||||||||||||||||||||| |||||    
T  20875389 aaacaacatcttatatgcaaacatttacatttatatattagttaaaaaatatggtcaaagtaaattatatgaatagtgcacattttaaaattacaacatg 20875488  T
Q  119 tatttagaaa 128  Q
    ||||| ||||    
T  20875489 tattttgaaa 20875498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 139
Target Start/End: Original strand, 35381031 - 35381156
Alignment:
Q  14 agatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacg 113  Q
    |||| |||||||| ||||| |||||| |||||||||||||||||||| ||||| |||| |||||||||||   |||||||||||||||| ||||| |  |    
T  35381031 agatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgtaaaaattgg 35381130  T
Q  114 acatgtatttagaaatagagggagta 139  Q
    |||||||||| ||||  |||||||||    
T  35381131 acatgtattttgaaacggagggagta 35381156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 139
Target Start/End: Original strand, 2760873 - 2760989
Alignment:
Q  23 aacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtatt 122  Q
    |||| ||||| |||||| |||||||||||||||||||| |||||||||| |||||||||||    ||||||||||||||| ||||| |  ||||||||||    
T  2760873 aacatcttacatgctaatatttgtatttatatattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgtaaaaattggacatgtatt 2760972  T
Q  123 tagaaatagagggagta 139  Q
    | ||||  |||||||||    
T  2760973 ttgaaacggagggagta 2760989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 142
Target Start/End: Complemental strand, 29830476 - 29830340
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| |||||||||||||||||||| ||||| |||| |||||||||||    |||||||||||||||  |    
T  29830476 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattaaa 29830377  T
Q  106 aaattacgacatgtatttagaaatagagggagtagta 142  Q
    ||| |  ||||||||||| ||||  ||||||||||||    
T  29830376 aaaattggacatgtattttgaaacggagggagtagta 29830340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 3037090 - 3036984
Alignment:
Q  29 ttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtatttagaaa 128  Q
    |||| |||||| |||||||||||||||||||| ||||| |||| |||||||||||    |||||||| |||||| || ||||||||||||||||| ||||    
T  3037090 ttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcatgtgaatagtacacattgtataattacgacatgtattttgaaa 3036991  T
Q  129 tagaggg 135  Q
     ||||||    
T  3036990 cagaggg 3036984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 12240307 - 12240429
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| ||||||||||||| |||||| ||||| |||| |||||||||||   |||||||||||||||| ||    
T  12240307 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgta 12240406  T
Q  106 aaattacgacatgtatttagaaa 128  Q
    ||| |  ||||||||||| ||||    
T  12240407 aaaattggacatgtattttgaaa 12240429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 38416792 - 38416912
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatg 118  Q
    |||||||| ||||| |||||| |||||||||||||||||||| ||||| |||| |||||||||||    |||||||||||||||  |||| |  ||||||    
T  38416792 aaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatg 38416891  T
Q  119 tatttagaaatagagggagta 139  Q
    ||||| ||||  |||||||||    
T  38416892 tattttgaaacggagggagta 38416912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 44232206 - 44232328
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| |||||||||||||||||||| ||||| |||| |||||||||||    |||||||||||||||  |    
T  44232206 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgca 44232305  T
Q  106 aaattacgacatgtatttagaaa 128  Q
    ||| |  ||||||||||| ||||    
T  44232306 aaaattagacatgtattttgaaa 44232328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 128
Target Start/End: Complemental strand, 7614735 - 7614626
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatg 118  Q
    |||||||| ||||| ||||||||||||||||||||||||||| |||||||||| ||||| |||||    ||| || |  | ||| |||||||||||||||    
T  7614735 aaacaacatcttacatgctaacatttgtatttatatattagttaaaaaatatggtcaaaataagtcatgtgattaatatatattgtaaaattacgacatg 7614636  T
Q  119 tatttagaaa 128  Q
    ||||| ||||    
T  7614635 tattttgaaa 7614626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 139
Target Start/End: Original strand, 47386415 - 47386548
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| ||||||||||||| |||||| |||||||||| |||||||||||    |||||||||||||||  |    
T  47386415 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattcca 47386514  T
Q  106 aaattacgacatgtatttagaaatagagggagta 139  Q
    |||    ||||||||||| ||||  |||||||||    
T  47386515 aaaagtggacatgtattttgaaacggagggagta 47386548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 139
Target Start/End: Original strand, 54330819 - 54330952
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| |||||||||||||||||||| ||||| |||| |||||||||||    ||||||| |||||||  |    
T  54330819 gtcgagataaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagcgcacattgca 54330918  T
Q  106 aaattacgacatgtatttagaaatagagggagta 139  Q
    ||| |  ||||||||||| ||||  |||||||||    
T  54330919 aaaattggacatgtatttcgaaacggagggagta 54330952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 139
Target Start/End: Original strand, 55209703 - 55209836
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| |||||||||||||||||||| ||||| |||| ||||||||| |    |||||||||||||||  |    
T  55209703 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaaatcaagtgaatagtgcacattgga 55209802  T
Q  106 aaattacgacatgtatttagaaatagagggagta 139  Q
    ||| |  ||||||||||| ||||  |||||||||    
T  55209803 aaaattggacatgtattttgaaacggagggagta 55209836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 139
Target Start/End: Complemental strand, 35686493 - 35686373
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatg 118  Q
    |||||||| ||||| || ||| ||||||||||||| |||||| ||||| |||| ||||||||||||   |||||||||||||||  |||| |  ||||||    
T  35686493 aaacaacatcttacatgataatatttgtatttatacattagttaaaaagtatggtcaaagtaagttaagtgaatagtgcacattgcaaaaattggacatg 35686394  T
Q  119 tatttagaaatagagggagta 139  Q
    ||||| ||||  |||||||||    
T  35686393 tattttgaaactgagggagta 35686373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 102
Target Start/End: Complemental strand, 45291965 - 45291869
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatt 102  Q
    ||||||| | || |||||||| ||||| |||||| |||||||||||||||||||| ||||| |||| |||||||||||    |||||||||||||||    
T  45291965 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatgatcaaagtaagtcaagtgaatagtgcacatt 45291869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 102
Target Start/End: Complemental strand, 50205876 - 50205780
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatt 102  Q
    ||||||| | || |||||||| |||||  ||||| |||||||||||||||||||| ||||| |||| |||||||||||   ||||||||||||||||    
T  50205876 gtcgagataaatcaaacaacatcttacgagctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacatt 50205780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 12625371 - 12625292
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgca 98  Q
    |||||||| ||||| |||||| ||||||||||||| |||||| ||||| |||| |||||||||||  |||||||||||||    
T  12625371 aaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcagatgaatagtgca 12625292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 38717005 - 38716887
Alignment:
Q  20 aacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgt 119  Q
    ||||||| ||||| |||||| ||||||||||||| |||||| ||||| |||| |||||||||| |  || |||||||||||||  |||| |  |||||||    
T  38717005 aacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaag-tcaattaatagtgcacattgcaaaaattggacatgt 38716907  T
Q  120 atttagaaatagagggagta 139  Q
    |||| |||| ||||||||||    
T  38716906 attttgaaacagagggagta 38716887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 38721456 - 38721337
Alignment:
Q  20 aacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgt 119  Q
    ||||||| ||||| |||||||||||||||||||||||| || |||||||||| ||||| |||||    |||||| | ||||||  |||| | ||||||||    
T  38721456 aacaacatcttacatgctaacatttgtatttatatatttgttaaaaaatatgatcaaaataagtcatgtgaataatacacattgaaaaaatgcgacatgt 38721357  T
Q  120 atttagaaatagagggagta 139  Q
    ||||  |||| |||||||||    
T  38721356 attttaaaatggagggagta 38721337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 124
Target Start/End: Original strand, 56297859 - 56297949
Alignment:
Q  34 tgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtattta 124  Q
    ||||||||||||||||||||||||||| || ||||||| |||||  |||||   |||||| || ||||| ||||| |||||||||||||||    
T  56297859 tgctaacatttgtatttatatattagttaataaatatggtcaaaacaagttatgtgaataatgtacattgtaaaaatacgacatgtattta 56297949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 26125841 - 26125764
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagt 83  Q
    ||||||| | || |||||||| ||||| |||||| ||||||||||||| |||||| |||||||||| |||||||||||    
T  26125841 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagt 26125764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 139
Target Start/End: Complemental strand, 26170119 - 26169986
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| ||||||||||||| |||||| ||||| |||| ||||||||| |    |||||||||||||||  |    
T  26170119 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaaatcaagtgaatagtgcacattgca 26170020  T
Q  106 aaattacgacatgtatttagaaatagagggagta 139  Q
    ||| |  ||||||||||| ||||  |||||||||    
T  26170019 aaaattggacatgtattttgaaacggagggagta 26169986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 43967856 - 43967779
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagt 83  Q
    ||||||| | || |||||||| ||||| |||||| |||||||||||||||||||| ||||| |||| |||||||||||    
T  43967856 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagt 43967779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 25296709 - 25296805
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatt 102  Q
    ||||||| | || |||||||| ||||| |||||| ||||||||||||| |||||| ||||| |||| |||||||||||    |||||||||||||||    
T  25296709 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacatt 25296805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 141
Target Start/End: Complemental strand, 17610413 - 17610278
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| ||||||||||||| |||||  |||||||||| |||||||||||    ||||||||||| |||  |    
T  17610413 gtcgagacaaattaaacaacatcttacatgctaatatttgtatttatacattagctaaaaaatatggtcaaagtaagtcaagtgaatagtgcatattgca 17610314  T
Q  106 aaattacgacatgtatttagaaatagagggagtagt 141  Q
    ||| |  |||||||||||  |||  |||||||||||    
T  17610313 aaaattggacatgtattttaaaacggagggagtagt 17610278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 41 - 123
Target Start/End: Complemental strand, 29051782 - 29051700
Alignment:
Q  41 atttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtattt 123  Q
    |||||||||||||||||||| |||||||||| ||||||||||||   |||||| || | ||| ||||||| | ||||||||||    
T  29051782 atttgtatttatatattagttaaaaaatatggtcaaagtaagttatgtgaataatgtatattgtaaaattgcaacatgtattt 29051700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 140
Target Start/End: Complemental strand, 31010347 - 31010213
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||| | ||||| |||||| |||| |||||||| |||||| ||||| |||| |||||||||||   ||||||||||||||||  |    
T  31010347 gtcgagacaaatcaaacaatatcttacatgctaatatttttatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattaca 31010248  T
Q  106 aaattacgacatgtatttagaaatagagggagtag 140  Q
    ||| |  || |||||||| ||||  ||||||||||    
T  31010247 aaaattggatatgtattttgaaaccgagggagtag 31010213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 14144599 - 14144664
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagtt 84  Q
    |||||||| ||||| | |||| |||||||||||||||||||| ||||||| || ||||||||||||    
T  14144599 aaacaacatcttacatactaatatttgtatttatatattagttaaaaaatgtggtcaaagtaagtt 14144664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 139
Target Start/End: Original strand, 27407776 - 27407881
Alignment:
Q  34 tgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtatttagaaatagag 133  Q
    |||||| |||||||||||||||||||| ||||| || | ||||||||||||   |||||||| |||| |  |||| | || ||||||||| ||||| |||    
T  27407776 tgctaatatttgtatttatatattagttaaaaagtagggtcaaagtaagttatgtgaatagttcacactgcaaaaatgcgtcatgtattttgaaatggag 27407875  T
Q  134 ggagta 139  Q
    ||||||    
T  27407876 ggagta 27407881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 34316625 - 34316537
Alignment:
Q  34 tgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtattt 123  Q
    |||||||||||||||||||||||||||  || |||||| |||||||||||   || ||||||||||| | ||||| |||||||| |||||    
T  34316625 tgctaacatttgtatttatatattagt-taacaatatgatcaaagtaagtcatataaatagtgcacactgtaaaaatacgacatatattt 34316537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 128
Target Start/End: Original strand, 2571033 - 2571133
Alignment:
Q  28 cttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtatttagaa 127  Q
    ||||| ||||||||||||||||||||||||||| |||||||||  ||||| ||| |    |||||| |||||||| ||||| |  ||||||||||| |||    
T  2571033 cttacatgctaacatttgtatttatatattagttaaaaaatatagtcaaaataaatcatgtgaataatgcacattataaaaatgtgacatgtattttgaa 2571132  T
Q  128 a 128  Q
    |    
T  2571133 a 2571133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 19903807 - 19903854
Alignment:
Q  34 tgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaa 81  Q
    ||||||||||||||||||||||||||| |||| ||||| |||||||||    
T  19903807 tgctaacatttgtatttatatattagttaaaatatatggtcaaagtaa 19903854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 36523111 - 36523174
Alignment:
Q  20 aacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagt 83  Q
    ||||||| ||||| || |||||||||||||||||||||||| ||||| |||  |||||||||||    
T  36523111 aacaacatcttacatgttaacatttgtatttatatattagttaaaaagtatagtcaaagtaagt 36523174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 84
Target Start/End: Original strand, 9029578 - 9029656
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagtt 84  Q
    ||||||| | || |||||| | ||||| |||||| ||||||||||||| |||||| ||||| |||| ||||||||||||    
T  9029578 gtcgagacaaatcaaacaatatcttacgtgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtt 9029656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 108
Target Start/End: Original strand, 17446762 - 17446864
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| || ||| ||||||||||||| |||||| ||||  |||| ||||||| |||   |||||||||||||||| ||    
T  17446762 gtcgagacaaatcaaacaacatcttacatgttaatatttgtatttatacattagttaaaatgtatggtcaaagttagtcaaatgaatagtgcacattgta 17446861  T
Q  106 aaa 108  Q
    |||    
T  17446862 aaa 17446864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 55091329 - 55091391
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaa 81  Q
    |||||||| ||||| | ||||||||||||||||||||||| | |||||||||| | |||||||    
T  55091329 aaacaacatcttacatactaacatttgtatttatatattaattaaaaaatatgatgaaagtaa 55091391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 30446430 - 30446354
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagt 83  Q
    ||||||| | || ||||||||  ||||  |||||||||||||||||||||||||||| |||||| | |||||||||||    
T  30446430 gtcgagacaaatcaaacaacattttacaggctaacatttgtatttatatattagtca-aaaatagggtcaaagtaagt 30446354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 129
Target Start/End: Complemental strand, 23360276 - 23360188
Alignment:
Q  38 aacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtatttagaaat 129  Q
    |||||||||||| |||||||||| |||||||| | |||||||||||   |||||||||||| |||  |||| | |||||||||||| |||||    
T  23360276 aacatttgtattcatatattagttaaaaaata-ggtcaaagtaagt--catgaatagtgcatattgcaaaaatgcgacatgtattttgaaat 23360188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 102
Target Start/End: Complemental strand, 55800939 - 55800871
Alignment:
Q  34 tgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatt 102  Q
    |||||| ||||||||||||| |||||| ||||| |||| |||||||||||    |||||||||||||||    
T  55800939 tgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacatt 55800871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 27755842 - 27755730
Alignment:
Q  20 aacaacaacttacctgctaacatttgtatttatata----ttagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgac 115  Q
    ||||||| ||||| ||||||||||||||||||||||    ||||| ||||| |||| ||||| ||||||  ||||| | || |||||  |||| | ||||    
T  27755842 aacaacatcttacgtgctaacatttgtatttatatatatgttagttaaaaagtatggtcaaaataagttatatgaacaatgtacattacaaaaatgcgac 27755743  T
Q  116 atgtatttagaaa 128  Q
    |||||||| ||||    
T  27755742 atgtattttgaaa 27755730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 128
Target Start/End: Complemental strand, 56080079 - 56079993
Alignment:
Q  42 tttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtatttagaaa 128  Q
    ||||||| ||||||||||| |||||||||  ||||||||| ||    |||||||||||||| | ||| |  ||||||||||||||||    
T  56080079 tttgtatgtatatattagttaaaaaatatagtcaaagtaaattatgcgaatagtgcacattatcaaaatgtgacatgtatttagaaa 56079993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 4467648 - 4467725
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagt 83  Q
    ||||||| | || |||||||| ||||| |||||| ||||||||||||| |||||| ||||| |||  |||||| ||||    
T  4467648 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatagtcaaagcaagt 4467725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 110
Target Start/End: Original strand, 29586005 - 29586077
Alignment:
Q  37 taacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaatt 110  Q
    ||||||||||||||| |||||| | |||||||||| ||||||||||||   ||||||||| | ||| |||||||    
T  29586005 taacatttgtatttacatattaattaaaaaatatg-tcaaagtaagttatgtgaatagtgtatattataaaatt 29586077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 50181171 - 50181114
Alignment:
Q  28 cttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttg 85  Q
    ||||| |||||| ||||||||||||| |||| | |||||||||| | |||||||||||    
T  50181171 cttacatgctaatatttgtatttatacattaattaaaaaatatgattaaagtaagttg 50181114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 53304541 - 53304480
Alignment:
Q  23 aacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagtt 84  Q
    ||||| |||| |||||| |||| ||||| |||||||||  ||||||||| ||||||||||||    
T  53304541 aacaatttacatgctaatatttatatttgtatattagtttaaaaatatgatcaaagtaagtt 53304480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 5119081 - 5119121
Alignment:
Q  37 taacatttgtatttatatattagtcaaaaaatatgttcaaa 77  Q
    |||||||||||||||||||||| | |||||||||| |||||    
T  5119081 taacatttgtatttatatattaattaaaaaatatggtcaaa 5119121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 10550542 - 10550498
Alignment:
Q  23 aacaacttacctgctaacatttgtatttatatattagtcaaaaaa 67  Q
    |||| ||||| ||||||||||| ||||||||||||||| ||||||    
T  10550542 aacatcttacatgctaacatttttatttatatattagttaaaaaa 10550498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 128
Target Start/End: Complemental strand, 19897726 - 19897650
Alignment:
Q  52 tatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtatttagaaa 128  Q
    |||||||||  |||||| || ||||||||||||   ||||||||| ||||| ||||||| ||||| |||||| ||||    
T  19897726 tatattagttcaaaaatgtggtcaaagtaagttatgtgaatagtgtacattgtaaaattgcgacaagtattttgaaa 19897650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 81
Target Start/End: Complemental strand, 25633298 - 25633254
Alignment:
Q  37 taacatttgtatttatatattagtcaaaaaatatgttcaaagtaa 81  Q
    |||||||||||||||||||||| | |||||||||| | |||||||    
T  25633298 taacatttgtatttatatattaattaaaaaatatggttaaagtaa 25633254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 39307816 - 39307752
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagt 83  Q
    ||||||||  |||| | ||||||||||||||||||||||||| ||||| ||   |||||||||||    
T  39307816 aaacaacattttacatactaacatttgtatttatatattagttaaaaagtagcatcaaagtaagt 39307752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 9e-24; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 15332948 - 15333052
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatg 118  Q
    |||||||| ||||| ||||||||||||||||||||||||||| ||||||| || |||||| ||| |   ||||||||||||||| ||||||| |||||||    
T  15332948 aaacaacatcttacatgctaacatttgtatttatatattagttaaaaaatttggtcaaagcaagctatgtgaatagtgcacattgtaaaattgcgacatg 15333047  T
Q  119 tattt 123  Q
    |||||    
T  15333048 tattt 15333052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 34 - 138
Target Start/End: Original strand, 41252920 - 41253024
Alignment:
Q  34 tgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtatttagaaatagag 133  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||||| |  |||||||||||||||| ||||||| |||||| ||||| |||| |||     
T  41252920 tgctaacatttgtatttatatattagttaaaaaatatggttaaagtaagctatatgaatagtgcacattgtaaaattgcgacatatattttgaaacagat 41253019  T
Q  134 ggagt 138  Q
    |||||    
T  41253020 ggagt 41253024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 42761625 - 42761745
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatg 118  Q
    |||||||| ||||| |||||| |||||||||||||||||||| ||||| |||| |||||||||||    ||||||||||||||| ||||| |  ||||||    
T  42761625 aaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgtaaaaattggacatg 42761724  T
Q  119 tatttagaaatagagggagta 139  Q
    ||||| ||||  |||||||||    
T  42761725 tattttgaaacggagggagta 42761745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 139
Target Start/End: Original strand, 13499464 - 13499597
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| |||||||||||||||||||| ||||| |||| |||||||||||    |||||||||||||||  |    
T  13499464 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgca 13499563  T
Q  106 aaattacgacatgtatttagaaatagagggagta 139  Q
    ||| |  ||||||||||| ||||  |||||||||    
T  13499564 aaaattggacatgtattttgaaacggagggagta 13499597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 139
Target Start/End: Original strand, 42490325 - 42490458
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| |||||||||||||||||||| ||||| |||| |||||||||||    |||||||||||||||  |    
T  42490325 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgca 42490424  T
Q  106 aaattacgacatgtatttagaaatagagggagta 139  Q
    ||| |  ||||||||||| ||||  |||||||||    
T  42490425 aaaattggacatgtattttgaaacggagggagta 42490458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 29 - 123
Target Start/End: Original strand, 3430426 - 3430520
Alignment:
Q  29 ttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtattt 123  Q
    |||| |||||| |||| |||| |||||||||| |||||||||| ||||||||||||  || ||||||||||||| ||||||| | ||||||||||    
T  3430426 ttacatgctaatatttttattaatatattagttaaaaaatatggtcaaagtaagttatataaatagtgcacattgtaaaattgcaacatgtattt 3430520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 6 - 144
Target Start/End: Original strand, 39866270 - 39866408
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| |||||||||||||||||||| ||||| |||| |||||||||||    |||||||||||||||  |    
T  39866270 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgca 39866369  T
Q  106 aaattacgacatgtatttagaaatagagggagtagtaat 144  Q
    ||| |  |||||||||||  |||  ||||||||| ||||    
T  39866370 aaaattggacatgtattttaaaacggagggagtattaat 39866408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 139
Target Start/End: Original strand, 27010603 - 27010736
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| |||||||||||||||||||| ||||| | || |||||||||||    |||||||||||||||  |    
T  27010603 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtttggtcaaagtaagtcaagtgaatagtgcacattgca 27010702  T
Q  106 aaattacgacatgtatttagaaatagagggagta 139  Q
    ||| |  ||||||||||| ||||  |||||||||    
T  27010703 aaaattggacatgtattttgaaacggagggagta 27010736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 139
Target Start/End: Complemental strand, 33415932 - 33415799
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| |||||||||||||||||||| ||||| |||| |||||||||||   || ||||  |||||||  |    
T  33415932 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaaataaataacgcacattgca 33415833  T
Q  106 aaattacgacatgtatttagaaatagagggagta 139  Q
    ||| |  ||||||||||| |||| ||||||||||    
T  33415832 aaaattggacatgtattttgaaacagagggagta 33415799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 27334873 - 27334956
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatt 102  Q
    |||||||| ||||| |||||| |||||||||||||||||||| ||||| |||| |||||||||||    |||||||||||||||    
T  27334873 aaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacatt 27334956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 41751567 - 41751613
Alignment:
Q  34 tgctaacatttgtatttatatattagtcaaaaaatatgttcaaagta 80  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||    
T  41751567 tgctaacatttgtatttatatattagttaaaaaatatgatcaaagta 41751613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 128
Target Start/End: Complemental strand, 6910454 - 6910345
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatg 118  Q
    |||||||| ||||| || ||| ||||||||||||| |||||| |||||||||| | |||||||||    ||||||||| ||||| ||||| |  ||||||    
T  6910454 aaacaacatcttacatgttaatatttgtatttatacattagttaaaaaatatggttaaagtaagtcaagtgaatagtgtacattgtaaaagttggacatg 6910355  T
Q  119 tatttagaaa 128  Q
    ||||| ||||    
T  6910354 tattttgaaa 6910345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 123
Target Start/End: Complemental strand, 20765329 - 20765212
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| || ||| |||||||||||||||||||| ||||| |||  |||||||||||    |||||||||||||||  |    
T  20765329 gtcgagacaaatcaaacaacatcttacatgttaatatttgtatttatatattagttaaaaagtatagtcaaagtaagtcaagtgaatagtgcacattgca 20765230  T
Q  106 aaattacgacatgtattt 123  Q
    ||| |  |||||||||||    
T  20765229 aaaattggacatgtattt 20765212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 30213937 - 30213860
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagt 83  Q
    ||||||| | || |||||||| ||||| |||||| |||||||||||||||||||| ||||| |||| ||||| |||||    
T  30213937 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaaataagt 30213860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 23 - 123
Target Start/End: Original strand, 23940508 - 23940608
Alignment:
Q  23 aacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtatt 122  Q
    |||| ||||| || |||||||| ||||||||||||||| |||||||| | |||| |||| ||  ||||| ||| ||| || ||||||| |||||||||||    
T  23940508 aacatcttacatgttaacatttttatttatatattagttaaaaaataaggtcaatgtaaattatatgaaaagtacacgttgtaaaattgcgacatgtatt 23940607  T
Q  123 t 123  Q
    |    
T  23940608 t 23940608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 134
Target Start/End: Complemental strand, 33803642 - 33803526
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaa-tatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacat 117  Q
    |||||||| |||||  ||||| |||| |||||||| |||||| |||||| |||| |||||||||||    |||||||||||||||  |||| |  |||||    
T  33803642 aaacaacatcttacaagctaatatttatatttatacattagttaaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattagacat 33803543  T
Q  118 gtatttagaaatagagg 134  Q
    |||||| ||||||||||    
T  33803542 gtattttgaaatagagg 33803526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 6 - 102
Target Start/End: Complemental strand, 36227678 - 36227582
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatt 102  Q
    ||||||| | || |||||||| ||||| |||||| ||||||||||||| |||| |  ||||||||| |||||||||||   ||||||||||| ||||    
T  36227678 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattaattgaaaaatatggtcaaagtaagtcaaatgaatagtgcgcatt 36227582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 40 - 124
Target Start/End: Complemental strand, 49404842 - 49404758
Alignment:
Q  40 catttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtattta 124  Q
    ||||| ||||||||||||||| |||||||||||| ||| |||  |   |||||| |||||||| |||||||| ||||||||||||    
T  49404842 catttatatttatatattagttaaaaaatatgtttaaaataaactatgtgaataatgcacattataaaattaagacatgtattta 49404758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 139
Target Start/End: Original strand, 15568095 - 15568196
Alignment:
Q  37 taacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtatttagaaatagaggga 136  Q
    |||||||||||||||||||||||| |||||||||| ||||| |||  |   | |||| |||||||| ||||||| |||||| ||||| |||| ||| |||    
T  15568095 taacatttgtatttatatattagttaaaaaatatgatcaaattaaactatgtaaataatgcacattgtaaaattgcgacat-tattttgaaacagatgga 15568193  T
Q  137 gta 139  Q
    |||    
T  15568194 gta 15568196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 21797689 - 21797567
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| ||||||||||||| |||||| ||||| |||| ||||| ||| |    |||||||||||||||  |    
T  21797689 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaaataaatcaagtgaatagtgcacattgca 21797590  T
Q  106 aaattacgacatgtatttagaaa 128  Q
    ||| |  ||||||||||| ||||    
T  21797589 aaaattggacatgtattttgaaa 21797567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 22786748 - 22786649
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatg 118  Q
    |||||||| ||||| ||| |||||||||  |||||||||||| ||||||||   |||||||||| |   |||||||||||||||  |||||| |||||||    
T  22786748 aaacaacatcttacatgcaaacatttgt--ttatatattagttaaaaaatagagtcaaagtaagctatgtgaatagtgcacattaaaaaattgcgacatg 22786651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 27813445 - 27813511
Alignment:
Q  34 tgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcaca 100  Q
    ||||||||||||||||||||||||||| |||||||||  ||||| |||| |   |||||||||||||    
T  27813445 tgctaacatttgtatttatatattagttaaaaaatatagtcaaaataagctatgtgaatagtgcaca 27813511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 38137944 - 38137886
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaa 77  Q
    |||||||| ||||| |||||| ||||||||||||| |||||| |||||||||| |||||    
T  38137944 aaacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaa 38137886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 102
Target Start/End: Complemental strand, 44561903 - 44561821
Alignment:
Q  20 aacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatt 102  Q
    ||||||| ||||| ||  ||||||||||||||||| ||||| ||||| |||| |||||||||||    |||||||||||||||    
T  44561903 aacaacatcttacatgtcaacatttgtatttatatgttagttaaaaagtatggtcaaagtaagtcatgtgaatagtgcacatt 44561821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 21005426 - 21005349
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagt 83  Q
    ||||||| | || |||||||| ||||| |||||| |||| ||||||||||||| | ||||| |||| |||||||||||    
T  21005426 gtcgagacaaatcaaacaacatcttacatgctaatatttatatttatatattaattaaaaagtatggtcaaagtaagt 21005349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 128
Target Start/End: Original strand, 34912301 - 34912393
Alignment:
Q  36 ctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtatttagaaa 128  Q
    |||| ||||||||||||| |||||| ||||| |||| |||||||||||    |||||||||||||||  |||| |  ||||||||||| ||||    
T  34912301 ctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaa 34912393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 48334663 - 48334766
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatg 118  Q
    |||||||| ||||| |||||| ||||||||||||||| |||| |||||| ||| | |||||||  |   |||||| || ||||| ||||||||||| |||    
T  48334663 aaacaacatcttacatgctaatatttgtatttatata-tagttaaaaaaaatggttaaagtaaactatgtgaataatgtacattgtaaaattacgagatg 48334761  T
Q  119 tattt 123  Q
    |||||    
T  48334762 tattt 48334766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 77
Target Start/End: Complemental strand, 3017896 - 3017853
Alignment:
Q  34 tgctaacatttgtatttatatattagtcaaaaaatatgttcaaa 77  Q
    |||||||||||||||||||||| |||| |||||||||| |||||    
T  3017896 tgctaacatttgtatttatataatagttaaaaaatatggtcaaa 3017853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 116
Target Start/End: Original strand, 15664105 - 15664184
Alignment:
Q  37 taacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgaca 116  Q
    |||||||||||||||||||||| | |||||||||| ||||| |||| |   | |||| |||||||| ||||||| |||||    
T  15664105 taacatttgtatttatatattaattaaaaaatatgatcaaattaagctatgtaaataatgcacattgtaaaattgcgaca 15664184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 17643851 - 17643800
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatat 70  Q
    |||||| | ||||| |||||||||||||||||| |||||||| |||||||||    
T  17643851 aaacaatatcttacatgctaacatttgtatttacatattagttaaaaaatat 17643800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 36 - 139
Target Start/End: Original strand, 19327489 - 19327592
Alignment:
Q  36 ctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtatttagaaatagaggg 135  Q
    ||||||||||||| ||| ||||||| |||||||||| |  |||||||||   ||||||||||| ||| | | | ||||||| |||||| | ||| |||||    
T  19327489 ctaacatttgtatctatctattagttaaaaaatatggtttaagtaagttatgtgaatagtgcatattgtcacactacgacacgtattttggaatggaggg 19327588  T
Q  136 agta 139  Q
    ||||    
T  19327589 agta 19327592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 22782384 - 22782285
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatg 118  Q
    |||||||| ||||| ||| |||||||||  |||||| ||||| ||||||||   |||||||||| |   |||||||||||||||  |||||| |||||||    
T  22782384 aaacaacatcttacatgcaaacatttgt--ttatattttagttaaaaaatagagtcaaagtaagctatgtgaatagtgcacattaaaaaattgcgacatg 22782287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 47164598 - 47164660
Alignment:
Q  23 aacaacttacctgctaacatttgtattt-atatattagtcaaaaaatatgttcaaagtaagtt 84  Q
    |||| ||||| | ||||||||||||||| |||||||||| |||||||||| | ||||||||||    
T  47164598 aacatcttacatactaacatttgtattttatatattagttaaaaaatatgattaaagtaagtt 47164660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 139
Target Start/End: Complemental strand, 19823993 - 19823900
Alignment:
Q  46 tatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtatttagaaatagagggagta 139  Q
    |||||||| |||||| ||||| |||| |||||||||||    |||||||||||||||  |||| |  ||||||||||| ||||  |||||||||    
T  19823993 tatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaacggagggagta 19823900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 139
Target Start/End: Complemental strand, 30057404 - 30057299
Alignment:
Q  34 tgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtatttagaaatagag 133  Q
    ||||||||||||  ||||||||||||| |||||||||| | |||||| |||   |||||| || || || | ||| ||| |||||||||| ||||| | |    
T  30057404 tgctaacatttgcttttatatattagttaaaaaatatggttaaagtatgttatgtgaataatgaacgttgtcaaaatactacatgtattttgaaatgggg 30057305  T
Q  134 ggagta 139  Q
    ||||||    
T  30057304 ggagta 30057299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 32273794 - 32273721
Alignment:
Q  55 attagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtatttagaaa 128  Q
    |||||| |||||||||| |||||||||  |   |||||| |||||||| | |||||||||||||||||| ||||    
T  32273794 attagttaaaaaatatgatcaaagtaaactatgtgaataatgcacattgtgaaattacgacatgtattttgaaa 32273721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 43467871 - 43467948
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagt 83  Q
    ||||||| | || |||||||| |||||||||||| ||| | ||||||| || ||| ||||| |||| |||||||||||    
T  43467871 gtcgagacaaatcaaacaacatcttacctgctaatattagaatttatacatcagttaaaaagtatggtcaaagtaagt 43467948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 83
Target Start/End: Complemental strand, 25527520 - 25527460
Alignment:
Q  23 aacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagt 83  Q
    |||| ||||| || ||| |||||||||||||||| ||| |||||||||| || ||||||||    
T  25527520 aacatcttacatgttaatatttgtatttatatatcagttaaaaaatatggtcgaagtaagt 25527460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 1e-22; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 145
Target Start/End: Original strand, 12456782 - 12456907
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatg 118  Q
    |||||||| ||||| | ||||||||||||||| ||||||||| |||||||||| | ||||||||||   | ||||||||||||| ||||||| | | |||    
T  12456782 aaacaacatcttacatactaacatttgtatttgtatattagttaaaaaatatgattaaagtaagttatgtaaatagtgcacattgtaaaattgcaatatg 12456881  T
Q  119 tatttagaaatagagggagtagtaatt 145  Q
    ||||| |||| ||||||||||||||||    
T  12456882 tattt-gaaacagagggagtagtaatt 12456907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 22 - 123
Target Start/End: Complemental strand, 32017330 - 32017229
Alignment:
Q  22 caacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtat 121  Q
    ||||| ||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||   |||||| |||||||  ||||||| || |||||||    
T  32017330 caacatcttacatgctaacatttgtatttatatattagttaaaaaatatgatcaaagtaagttatgtgaatattgcacatcataaaattgcgtcatgtat 32017231  T
Q  122 tt 123  Q
    ||    
T  32017230 tt 32017229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 24992280 - 24992400
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatg 118  Q
    |||||||| ||||  |||||| ||||||||||||| |||||| |||||||||| |||||||||| |   ||||||||||||||| ||||| || ||||||    
T  24992280 aaacaacatcttatatgctaatatttgtatttataaattagttaaaaaatatggtcaaagtaagctatgtgaatagtgcacattgtaaaactatgacatg 24992379  T
Q  119 tatttagaaatagagggagta 139  Q
    ||||| ||||  |||||||||    
T  24992380 tattttgaaacggagggagta 24992400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 6 - 141
Target Start/End: Complemental strand, 978210 - 978075
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| |||||||||||||||||||| ||||| |||| |||||||||||    |||||||||||||||  |    
T  978210 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgca 978111  T
Q  106 aaattacgacatgtatttagaaatagagggagtagt 141  Q
    ||| |  ||||||||||| ||||  |||||||||||    
T  978110 aaaattggacatgtattttgaaacggagggagtagt 978075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 9502756 - 9502852
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatt 102  Q
    ||||||| | || |||||||| ||||| |||||| |||||||||||||||||||| ||||| |||| |||||||||||   ||||||||||||||||    
T  9502756 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacatt 9502852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 139
Target Start/End: Complemental strand, 33387353 - 33387220
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| |||||||||||||||||||| ||||| |||  |||||||||||    |||||||||||||||  |    
T  33387353 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatagtcaaagtaagtcaagtgaatagtgcacattgca 33387254  T
Q  106 aaattacgacatgtatttagaaatagagggagta 139  Q
    ||| |  |||||||||||  |||| |||||||||    
T  33387253 aaaattggacatgtattttaaaatggagggagta 33387220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 33587611 - 33587731
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatg 118  Q
    |||||||| ||||| || ||| ||||||||||||| |||||| |||||||||| |||||||||||   ||||||| ||||||||  |||| |  ||||||    
T  33587611 aaacaacatcttacatgttaatatttgtatttatagattagttaaaaaatatggtcaaagtaagtcaaatgaataatgcacattgcaaaaattggacatg 33587710  T
Q  119 tatttagaaatagagggagta 139  Q
    ||||| |||| ||| ||||||    
T  33587711 tattttgaaacagatggagta 33587731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 41 - 124
Target Start/End: Original strand, 36240095 - 36240178
Alignment:
Q  41 atttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtattta 124  Q
    ||||||||||||||||||||  ||||||||| |||||| |||||  | |||||||||||||| | ||||||| |||||||||||    
T  36240095 atttgtatttatatattagtttaaaaatatggtcaaagaaagttataagaatagtgcacattgtcaaattacaacatgtattta 36240178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 139
Target Start/End: Original strand, 8086159 - 8086292
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| || ||| |||||||||||||||||||| ||||| |||  |||||||||||    |||||||||||||||  |    
T  8086159 gtcgagacaaatcaaacaacatcttacatgttaatatttgtatttatatattagttaaaaagtatagtcaaagtaagtcaagtgaatagtgcacattgca 8086258  T
Q  106 aaattacgacatgtatttagaaatagagggagta 139  Q
    ||| |  ||||||||||| ||||  |||||||||    
T  8086259 aaaattggacatgtattttgaaacggagggagta 8086292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 128
Target Start/End: Complemental strand, 37495708 - 37495621
Alignment:
Q  41 atttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtatttagaaa 128  Q
    |||||||||||||||||||| |||||||||| |||||||||| |    |||||||||| ||| ||||||||| | |||||||| ||||    
T  37495708 atttgtatttatatattagttaaaaaatatgatcaaagtaagatatgagaatagtgcatattataaaattacaaaatgtattttgaaa 37495621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 14634286 - 14634408
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| |||||||||||||||||||| ||||| |||  |||||||||||    ||| |||||||||||  |    
T  14634286 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatagtcaaagtaagtcaagtgactagtgcacattgca 14634385  T
Q  106 aaattacgacatgtatttagaaa 128  Q
    ||| |  ||||||||||| ||||    
T  14634386 aaaattggacatgtattttgaaa 14634408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 18998807 - 18998745
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaa 81  Q
    |||||||| ||||| | ||||||||||||||||||||||||| |||||||||| | |||||||    
T  18998807 aaacaacatcttacatactaacatttgtatttatatattagttaaaaaatatggttaaagtaa 18998745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 139
Target Start/End: Complemental strand, 39776740 - 39776630
Alignment:
Q  29 ttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtatttagaaa 128  Q
    |||| |||||| |||||||||||||| ||||| ||||| || | ||||| ||||||   ||||||||| |||||  |||| ||||| |||||||| ||||    
T  39776740 ttacatgctaatatttgtatttatatgttagttaaaaagtacggtcaaaataagttatgtgaatagtgtacattgcaaaaatacgaaatgtattttgaaa 39776641  T
Q  129 tagagggagta 139  Q
    | |||||||||    
T  39776640 tcgagggagta 39776630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 11761186 - 11761125
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagta 80  Q
    |||||||| ||||| || ||| |||||||||||||||||||| |||||||||| ||||||||    
T  11761186 aaacaacatcttacatgttaatatttgtatttatatattagttaaaaaatatggtcaaagta 11761125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 3472419 - 3472483
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagt 83  Q
    |||||||| ||||| |||||| ||||||||||||  |||||| |||||||||| |||||||||||    
T  3472419 aaacaacatcttacatgctaatatttgtatttattcattagttaaaaaatatggtcaaagtaagt 3472483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 128
Target Start/End: Original strand, 24916388 - 24916499
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaa--tatgttcaaagtaagttggatgaatagtgcacattttaaaattacgaca 116  Q
    |||||||| ||||  |||||| ||||||||||||| |||||| ||||||  |||| |||||||||| |   |||||||| |||||| |||||||  ||||    
T  24916388 aaacaacatcttatatgctaatatttgtatttataaattagttaaaaaaaatatggtcaaagtaagctatgtgaatagtacacattgtaaaattgtgaca 24916487  T
Q  117 tgtatttagaaa 128  Q
    ||||||| ||||    
T  24916488 tgtattttgaaa 24916499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 6 - 142
Target Start/End: Complemental strand, 40156331 - 40156195
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| ||||||||||||| |||| | ||||| |||| | |||||||||    |||||||||||||||  |    
T  40156331 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattaattaaaaattatggtaaaagtaagtcaagtgaatagtgcacattgca 40156232  T
Q  106 aaattacgacatgtatttagaaatagagggagtagta 142  Q
    ||| |  || |||||||| ||||  ||||||||||||    
T  40156231 aaagttggatatgtattttgaaacggagggagtagta 40156195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 26387021 - 26387084
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaag 82  Q
    |||||||| ||||  ||||||||||| ||||||||| ||||| |||||||||| ||||||||||    
T  26387021 aaacaacatcttaaatgctaacatttatatttatatgttagttaaaaaatatgatcaaagtaag 26387084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 27579581 - 27579636
Alignment:
Q  28 cttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagt 83  Q
    ||||| ||||||||||||||||||||||||||| |||||||||  | |||||||||    
T  27579581 cttacatgctaacatttgtatttatatattagttaaaaaatatagttaaagtaagt 27579636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 141
Target Start/End: Original strand, 12007774 - 12007896
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatg 118  Q
    ||||||||  |||| ||||| ||||||||||||||||||| | ||||| || | ||||| |||||    | ||||||||||| | ||||| | |||||||    
T  12007774 aaacaacattttacatgctagcatttgtatttatatattaattaaaaagtagggtcaaattaagtcatgtaaatagtgcacaatataaaaatgcgacatg 12007873  T
Q  119 tatttagaaatagagggagtagt 141  Q
    ||||| ||||  |||||||||||    
T  12007874 tattttgaaacggagggagtagt 12007896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 3422355 - 3422400
Alignment:
Q  22 caacaacttacctgctaacatttgtatttatatattagtcaaaaaa 67  Q
    ||||| ||||| ||||||||||||||||||||||||||| ||||||    
T  3422355 caacatcttacatgctaacatttgtatttatatattagttaaaaaa 3422400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 139
Target Start/End: Original strand, 38916407 - 38916512
Alignment:
Q  34 tgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtatttagaaatagag 133  Q
    ||||||||||||||||||||| ||||| ||||| |||| |||||| ||||    ||||||||||| | |  |||| | |||||||||||| ||||  |||    
T  38916407 tgctaacatttgtatttatatgttagttaaaaagtatggtcaaagcaagtcatgtgaatagtgcatactgcaaaaatgcgacatgtattttgaaacggag 38916506  T
Q  134 ggagta 139  Q
    ||||||    
T  38916507 ggagta 38916512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 18094223 - 18094343
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatg 118  Q
    |||||||| ||||| |||||| ||||||||||||| |||||| ||||| |||  | ||||||||||   |||||| ||||||||  |||| |   |||||    
T  18094223 aaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtataattaaagtaagttaagtgaataatgcacattgcaaaaattgaacatg 18094322  T
Q  119 tatttagaaatagagggagta 139  Q
    ||||| ||||  |||||||||    
T  18094323 tattttgaaacggagggagta 18094343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 32400447 - 32400399
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaa 67  Q
    |||||||| ||||| |||||| |||||||||||||||||||| ||||||    
T  32400447 aaacaacatcttacatgctaatatttgtatttatatattagttaaaaaa 32400399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 125
Target Start/End: Complemental strand, 4671314 - 4671223
Alignment:
Q  34 tgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtatttag 125  Q
    ||||| ||||||||||||||||| ||| ||||||||||  |||||||||||   |||||| | || ||| | ||| |||||||| |||||||    
T  4671314 tgctatcatttgtatttatatatcagttaaaaaatatgaacaaagtaagttatgtgaataatacatattatcaaaatacgacatatatttag 4671223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 65
Target Start/End: Original strand, 30355003 - 30355062
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaa 65  Q
    ||||||| | || |||||||| ||||| |||||| |||||||||||||||||||| ||||    
T  30355003 gtcgagacaaattaaacaacatcttacatgctaatatttgtatttatatattagttaaaa 30355062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 123
Target Start/End: Original strand, 7750066 - 7750132
Alignment:
Q  57 tagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtattt 123  Q
    |||| |||||||||  ||||| ||| ||  |||||||||||||||| |||||||||||| |||||||    
T  7750066 tagttaaaaaatataatcaaaataaattatatgaatagtgcacattgtaaaattacgacgtgtattt 7750132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 10696883 - 10696801
Alignment:
Q  47 atttatatattagtcaaaaaat-atgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtatttagaaa 128  Q
    |||||||||||||||||||||  ||| |||||||||||   ||||||||||||||||  |||||  |||| ||||||| ||||    
T  10696883 atttatatattagtcaaaaaaacatgatcaaagtaagtcatatgaatagtgcacattgcaaaatagcgacgtgtattttgaaa 10696801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 34112073 - 34111999
Alignment:
Q  28 cttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatt 102  Q
    ||||| || ||| ||||||||||||| |||||| |||||||||  |||||||||||    |||||||||||||||    
T  34112073 cttacatgataatatttgtatttatagattagtaaaaaaatatagtcaaagtaagtcaagtgaatagtgcacatt 34111999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 7224298 - 7224221
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagt 83  Q
    ||||||| | || ||||||||  |||| |||||| ||||||||||||| |||||| | ||| |||| |||||||||||    
T  7224298 gtcgagacaaatcaaacaacattttacatgctaatatttgtatttataaattagttagaaagtatggtcaaagtaagt 7224221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 109
Target Start/End: Complemental strand, 8627221 - 8627164
Alignment:
Q  52 tatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaat 109  Q
    ||||||||| |||||||||| |||||||||||| ||| || | |||||||||| ||||    
T  8627221 tatattagtaaaaaaatatggtcaaagtaagttagatcaaaattgcacattttcaaat 8627164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 12359978 - 12360011
Alignment:
Q  34 tgctaacatttgtatttatatattagtcaaaaaa 67  Q
    ||||||||||||||||||||||||||| ||||||    
T  12359978 tgctaacatttgtatttatatattagttaaaaaa 12360011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 31197850 - 31197911
Alignment:
Q  37 taacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgca 98  Q
    |||||||||||||||||| ||||| ||||| |||  |||||||||||| | | |||||||||    
T  31197850 taacatttgtatttatattttagttaaaaattattgtcaaagtaagttaggtcaatagtgca 31197911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 102
Target Start/End: Complemental strand, 11251219 - 11251151
Alignment:
Q  34 tgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatt 102  Q
    |||||| ||||||||||||| |||||| ||||| |||| ||||| |||||    |||||||||||||||    
T  11251219 tgctaatatttgtatttatacattagttaaaaagtatggtcaaaataagtcaagtgaatagtgcacatt 11251151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 6e-22; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 6 - 139
Target Start/End: Complemental strand, 41898121 - 41897988
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | ||||||||||| ||||| |||||| |||||||||||||||||||| ||||| |||| |||||||||||    |||||||||||||||  |    
T  41898121 gtcgagacaaatgaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatgatcaaagtaagtcaagtgaatagtgcacattgca 41898022  T
Q  106 aaattacgacatgtatttagaaatagagggagta 139  Q
    ||| |  ||||||||||| ||||  |||||||||    
T  41898021 aaaattggacatgtattttgaaacggagggagta 41897988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 6766692 - 6766812
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatg 118  Q
    |||||||| ||||| |||||||||||| ||||||| |||||| |||||||||| ||||| ||||||   |||||| |||| ||| ||||||| |||||||    
T  6766692 aaacaacatcttacatgctaacatttgcatttatacattagttaaaaaatatggtcaaaataagttatgtgaataatgcagattgtaaaattgcgacatg 6766791  T
Q  119 tatttagaaatagagggagta 139  Q
    ||||| ||||  |||||||||    
T  6766792 tattttgaaacggagggagta 6766812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 142
Target Start/End: Complemental strand, 48602569 - 48602433
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| |||||||||||||||||||| ||||| |||| |||||||||||   ||||||||||||||||  |    
T  48602569 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgga 48602470  T
Q  106 aaattacgacatgtatttagaaatagagggagtagta 142  Q
    ||| |  | ||||||||| ||||  ||||||||||||    
T  48602469 aaaattgggcatgtattttgaaacggagggagtagta 48602433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 128
Target Start/End: Original strand, 4131645 - 4131754
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatg 118  Q
    |||||||| ||||| ||||||| ||||||||||||||||||| |||||||||| | ||||||||||   ||||||||  ||||| ||||||| ||||||     
T  4131645 aaacaacatcttacatgctaacttttgtatttatatattagttaaaaaatatggttaaagtaagttatgtgaatagtatacattgtaaaattgcgacata 4131744  T
Q  119 tatttagaaa 128  Q
    ||||| ||||    
T  4131745 tattttgaaa 4131754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 139
Target Start/End: Complemental strand, 20885236 - 20885103
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| ||||||||||||| |||||| |||||||||| |||||||||||    |||||||| |||||| ||    
T  20885236 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtccacattgta 20885137  T
Q  106 aaattacgacatgtatttagaaatagagggagta 139  Q
    ||| |  ||||||||||| ||||  |||||||||    
T  20885136 aaaattggacatgtattttgaaacggagggagta 20885103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 139
Target Start/End: Original strand, 28061644 - 28061777
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| |||||||||||||||||||| ||||| |||| |||||||||||    |||||||||||||||  |    
T  28061644 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgca 28061743  T
Q  106 aaattacgacatgtatttagaaatagagggagta 139  Q
    ||| |  ||||||||||| ||||  |||||||||    
T  28061744 aaaattggacatgtattttgaaacggagggagta 28061777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 139
Target Start/End: Complemental strand, 36623441 - 36623308
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| |||||||||||||||||||| ||||| |||| |||||||||||    |||||||||||||||  |    
T  36623441 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgca 36623342  T
Q  106 aaattacgacatgtatttagaaatagagggagta 139  Q
    ||| |  ||||||||||| ||||  |||||||||    
T  36623341 aaaattggacatgtattttgaaacggagggagta 36623308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 139
Target Start/End: Complemental strand, 41088704 - 41088587
Alignment:
Q  22 caacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtat 121  Q
    ||||| ||||| || ||| ||||| ||||||| |||||| |||||||||| |||||||||||  |||||| |||||| ||| |||||||  |||||||||    
T  41088704 caacatcttacatgttaatatttgcatttatacattagttaaaaaatatggtcaaagtaagtcagatgaacagtgcatattgtaaaatttggacatgtat 41088605  T
Q  122 ttagaaatagagggagta 139  Q
    || ||||| |||||||||    
T  41088604 tttgaaatggagggagta 41088587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 139
Target Start/End: Complemental strand, 47156160 - 47156027
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| |||||||||||||||||||| ||||| |||| |||||||||||    |||||||||||||||  |    
T  47156160 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgca 47156061  T
Q  106 aaattacgacatgtatttagaaatagagggagta 139  Q
    ||| |  ||||||||||| ||||  |||||||||    
T  47156060 aaaattggacatgtattttgaaacggagggagta 47156027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 141
Target Start/End: Complemental strand, 42877506 - 42877384
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatg 118  Q
    |||||||| ||||| | |||| |||| |||||||| |||||| ||||| |||| ||||||||||||  || |||||||||||||  ||||||  ||||||    
T  42877506 aaacaacatcttacattctaatatttttatttatacattagttaaaaagtatggtcaaagtaagttaaattaatagtgcacattacaaaatttggacatg 42877407  T
Q  119 tatttagaaatagagggagtagt 141  Q
    ||||| ||||  |||||||||||    
T  42877406 tattttgaaacggagggagtagt 42877384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 42890472 - 42890594
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| |||||||||||||||||||| ||||| |||| ||||| |||||   ||||||||||||||||  |    
T  42890472 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaaataagtcaaatgaatagtgcacattgca 42890571  T
Q  106 aaattacgacatgtatttagaaa 128  Q
    ||| |  ||||||||||| ||||    
T  42890572 aaaattggacatgtattttgaaa 42890594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 36 - 141
Target Start/End: Complemental strand, 3785623 - 3785518
Alignment:
Q  36 ctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtatttagaaatagaggg 135  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||  |  |||||||||||| ||| | |||||| || |||||||| ||||  ||||     
T  3785623 ctaacatttgtatttatatattagttaaaaaatatggtcaaagtaaactatatgaatagtgcatattgtgaaattatgatatgtattttgaaacggagga 3785524  T
Q  136 agtagt 141  Q
    ||||||    
T  3785523 agtagt 3785518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 139
Target Start/End: Original strand, 38851976 - 38852109
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||| | ||||| |||||| |||||||||||||||||||| ||||| |||| |||||||||||    |||||||||||||||  |    
T  38851976 gtcgagacaaatcaaacaatatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgga 38852075  T
Q  106 aaattacgacatgtatttagaaatagagggagta 139  Q
    ||| |  ||||||||||| ||||  |||||||||    
T  38852076 aaaattggacatgtattttgaaacggagggagta 38852109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 128
Target Start/End: Original strand, 35570193 - 35570305
Alignment:
Q  21 acaacaacttacctgctaacatttgtatttatatattagtcaaaaaa-----tatgttcaaagtaagttggatgaatagtgcacattttaaaattacgac 115  Q
    |||||| ||||| |||||| |||||||||| ||||||||| ||||||     |||| ||||||||||||   ||||||||||||||| ||||||| ||||    
T  35570193 acaacatcttacatgctaaaatttgtatttgtatattagttaaaaaaaaaaatatggtcaaagtaagttttgtgaatagtgcacattgtaaaattgcgac 35570292  T
Q  116 atgtatttagaaa 128  Q
    |||||||| ||||    
T  35570293 atgtattttgaaa 35570305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 36515942 - 36515854
Alignment:
Q  36 ctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtattta 124  Q
    ||||||||||||||||||||||  | |||||||||| | |||||||||||  |||||||| |||||| | ||||| |||||||||||||    
T  36515942 ctaacatttgtatttatatattgattaaaaaatatggttaaagtaagttgtgtgaatagtacacattgttaaattgcgacatgtattta 36515854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 40090047 - 40090143
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatt 102  Q
    ||||||| | || |||||||| ||||| |||||| |||||||||||||||||||| ||||| |||| |||||||||||    |||||||||||||||    
T  40090047 gtcgagataaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacatt 40090143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 128
Target Start/End: Original strand, 7457862 - 7457972
Alignment:
Q  17 tgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgaca 116  Q
    |||||||||| ||||| |||||| ||||||||||||| |||||| ||||| |||| |||||||||||  | |||||||||||||||  |||| |  ||||    
T  7457862 tgaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtaag-tgaatagtgcacattgcaaaacttagaca 7457960  T
Q  117 tgtatttagaaa 128  Q
    ||||||| ||||    
T  7457961 tgtattttgaaa 7457972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 27045550 - 27045612
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaa 81  Q
    |||||||| ||||  ||||||||||||||||||||||||||| |||||||||| |||||||||    
T  27045550 aaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatatggtcaaagtaa 27045612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 139
Target Start/End: Complemental strand, 16778638 - 16778505
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| ||||||||||||| |||||| ||||| |||| ||||||||||     |||||||||||||||  |    
T  16778638 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaattatggtcaaagtaagccaagtgaatagtgcacattgca 16778539  T
Q  106 aaattacgacatgtatttagaaatagagggagta 139  Q
    ||| |  ||||||||||| ||||  |||||||||    
T  16778538 aaagttggacatgtattttgaaacggagggagta 16778505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 39130055 - 39130151
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatt 102  Q
    ||||||| | || |||||||| ||||| |||||| ||||||||||||| |||||| |||||||||| |||||| ||||    |||||||||||||||    
T  39130055 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagaaagtcaagtgaatagtgcacatt 39130151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 102
Target Start/End: Complemental strand, 44732145 - 44732049
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatt 102  Q
    ||||||| | || |||||||| ||||| |||||| ||||||||||||| |||||| ||||| |||| |||||||||||    |||||||||||||||    
T  44732145 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatgatcaaagtaagtcaagtgaatagtgcacatt 44732049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 46103512 - 46103576
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagt 83  Q
    |||||||| ||||| |||||| |||||||||||||||||||| ||||| |||| |||||||||||    
T  46103512 aaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagt 46103576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 123
Target Start/End: Original strand, 16870632 - 16870726
Alignment:
Q  29 ttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtattt 123  Q
    |||| ||| ||||||| ||||||||||||||| || ||||||| ||||||||||||   ||||||||||| ||| |||||   ||||||||||||    
T  16870632 ttacgtgcaaacatttatatttatatattagttaacaaatatggtcaaagtaagttatttgaatagtgcatattgtaaaaccgcgacatgtattt 16870726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 40256190 - 40256068
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| ||||||||||||| |||||| ||||| |||| |||||||||||    ||||||| |||||||  |    
T  40256190 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagagcacattgca 40256091  T
Q  106 aaattacgacatgtatttagaaa 128  Q
    ||| |  ||||||||||| ||||    
T  40256090 aaaattggacatgtattttgaaa 40256068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 37 - 123
Target Start/End: Original strand, 49110630 - 49110716
Alignment:
Q  37 taacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtattt 123  Q
    ||||||||||||| |||||||||| |||||||||| ||||||||| |    |||||||| |||||| |||||||  |||||||||||    
T  49110630 taacatttgtattaatatattagttaaaaaatatggtcaaagtaaatcatttgaatagtacacattataaaattgtgacatgtattt 49110716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 8683923 - 8683834
Alignment:
Q  34 tgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtattt 123  Q
    |||||| |||||||||||||||||||| ||||| |||| |||||||||||    |||||| ||||||||| |||| |  |||||||||||    
T  8683923 tgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacatttcaaaaattggacatgtattt 8683834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 84
Target Start/End: Original strand, 38767221 - 38767266
Alignment:
Q  39 acatttgtatttatatattagtcaaaaaatatgttcaaagtaagtt 84  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||    
T  38767221 acatttgtatttatatattagttaaaaaatatggtcaaagtaagtt 38767266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 6 - 102
Target Start/End: Complemental strand, 2198735 - 2198639
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatt 102  Q
    ||||||| | || |||||||| ||||| || ||| ||||||||||||| |||||| ||||| |||||||||| ||| |  |||||||||| ||||||    
T  2198735 gtcgagacaaatcaaacaacatcttacttgttaatatttgtatttatacattagttaaaaagtatgttcaaaataaatcagatgaatagtacacatt 2198639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 49101955 - 49102059
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatg 118  Q
    |||||||| ||||| ||| || |||||||||||| ||||||| ||||||||||   ||| ||||||  |||||||||||| ||| |||||||   |||||    
T  49101955 aaacaacatcttacatgcaaaaatttgtatttatgtattagttaaaaaatatgacaaaaataagttatatgaatagtgcatattgtaaaattgtaacatg 49102054  T
Q  119 tattt 123  Q
    |||||    
T  49102055 tattt 49102059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 4048876 - 4048927
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatat 70  Q
    ||||||||||||||  |||| ||||||||||||||||||||| |||||||||    
T  4048876 aaacaacaacttacaagctagcatttgtatttatatattagttaaaaaatat 4048927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 37467464 - 37467511
Alignment:
Q  34 tgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaa 81  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||||    
T  37467464 tgctaacatttgtatttatatattagttaaaaaatatggttaaagtaa 37467511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 108
Target Start/End: Complemental strand, 46479962 - 46479860
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| ||||||||||||| |||||| ||||| | || |||||||||||     |||||||||||||| ||    
T  46479962 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaattttggtcaaagtaagtcaagcgaatagtgcacattgta 46479863  T
Q  106 aaa 108  Q
    |||    
T  46479862 aaa 46479860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 47525993 - 47526083
Alignment:
Q  34 tgctaacatttgtatttatatattag-tcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtattt 123  Q
    |||||||||||||||||||||||||| | |||||||||| |||||||||| | | | |||| |||| | | ||||||| |||||| |||||    
T  47525993 tgctaacatttgtatttatatattagttaaaaaaatatgatcaaagtaagctaggtaaataatgcataatgtaaaattgcgacatatattt 47526083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 7439036 - 7438959
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagt 83  Q
    ||||||| | || |||||||| ||||| |||||| ||||||||||||| |||||| ||||| |||| ||||| |||||    
T  7439036 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaaataagt 7438959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 11502722 - 11502787
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagtt 84  Q
    |||| ||| ||||| |||||| ||||||||||||| |||||| ||||| |||| ||||||||||||    
T  11502722 aaacgacatcttacatgctaatatttgtatttatacattagttaaaaagtatgatcaaagtaagtt 11502787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 32431500 - 32431621
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatg 118  Q
    |||||||| ||||| | |||| ||||||||||||| |||||| ||||| |||| |||||||||||    |||||| ||||||||  |||| |  |||||     
T  32431500 aaacaacatcttacatactaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacattgcaaaaatttgacata 32431599  T
Q  119 tatttagaaatagagggagtag 140  Q
    ||||| ||||  ||||||||||    
T  32431600 tattttgaaacggagggagtag 32431621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 99
Target Start/End: Complemental strand, 6174952 - 6174876
Alignment:
Q  23 aacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcac 99  Q
    |||| ||||| ||||||  |||||||||||| |||||| |||||||||| ||| |||||||   |||||||||||||    
T  6174952 aacatcttacatgctaatgtttgtatttatacattagttaaaaaatatggtcacagtaagtcaaatgaatagtgcac 6174876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 128
Target Start/End: Complemental strand, 42662284 - 42662198
Alignment:
Q  41 atttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtatttagaaa 128  Q
    |||||||||||||||||||| ||||| |||| ||||||||||   | |||||| | ||||||  |||||| |||||||||||| ||||    
T  42662284 atttgtatttatatattagttaaaaagtatggtcaaagtaagaatg-tgaataatacacattgcaaaattgcgacatgtattttgaaa 42662198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 140
Target Start/End: Original strand, 46322129 - 46322228
Alignment:
Q  41 atttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtatttagaaatagagggagtag 140  Q
    ||||||||| ||| |||||| ||||| |||| |||||||||||    |||||| ||||||||  |||| |  ||||||||||| ||||| ||||||||||    
T  46322129 atttgtattgatacattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacattgcaaaaattggacatgtattttgaaatggagggagtag 46322228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 5788506 - 5788583
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagt 83  Q
    ||||||| | || |||||||| ||||| | |||| ||||||||||||| |||||| ||||| |||| | |||||||||    
T  5788506 gtcgagacaaatcaaacaacatcttacatactaatatttgtatttatacattagtaaaaaagtatgattaaagtaagt 5788583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 128
Target Start/End: Original strand, 25566690 - 25566798
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatg 118  Q
    |||||||| || || |||||| ||||||||| ||| |||||| | ||| |||| |||||||||||    ||||||||||||||| ||||| |  ||||||    
T  25566690 aaacaacatctcacatgctaatatttgtatt-atacattagttagaaagtatggtcaaagtaagtcaagtgaatagtgcacattgtaaaaattggacatg 25566788  T
Q  119 tatttagaaa 128  Q
    ||||| ||||    
T  25566789 tattttgaaa 25566798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 7169224 - 7169184
Alignment:
Q  41 atttgtatttatatattagtcaaaaaatatgttcaaagtaa 81  Q
    |||||||||||||||||||| |||||||||  |||||||||    
T  7169224 atttgtatttatatattagttaaaaaatatagtcaaagtaa 7169184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 36341739 - 36341631
Alignment:
Q  20 aacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgt 119  Q
    ||||||| ||||| | ||||||||| ||||||||| ||||| ||||| |||  | ||| |||||    |||||||||||||||  |||| | ||||||||    
T  36341739 aacaacatcttacattctaacatttatatttatatgttagttaaaaagtatcgttaaattaagtcatgtgaatagtgcacattgcaaaaatgcgacatgt 36341640  T
Q  120 atttagaaa 128  Q
    |||| ||||    
T  36341639 attttgaaa 36341631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 102
Target Start/End: Complemental strand, 36585242 - 36585146
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatt 102  Q
    ||||||| | || |||||||| ||||| |||||| ||||||||||||| ||||||  |||| |||| | ||| |||||    |||||||||||||||    
T  36585242 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagtttaaaagtatggtaaaaataagtcaagtgaatagtgcacatt 36585146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 1e-19; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 132
Target Start/End: Complemental strand, 28477873 - 28477760
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatg 118  Q
    |||||||||||||| |||||| |||||||||||||||||||| ||||| |||| |||||| ||||    |||||||| ||||||  ||||||  ||||||    
T  28477873 aaacaacaacttacatgctaatatttgtatttatatattagttaaaaattatggtcaaagcaagtcatgtgaatagtacacattgcaaaattgtgacatg 28477774  T
Q  119 tatttagaaataga 132  Q
    ||||| ||||||||    
T  28477773 tattttgaaataga 28477760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 139
Target Start/End: Original strand, 32414808 - 32414941
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| |||||||||||||||||||| ||||| |||| |||||||||||    |||||||||||||||  |    
T  32414808 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgaa 32414907  T
Q  106 aaattacgacatgtatttagaaatagagggagta 139  Q
    ||| |  ||||||||||| ||||  |||||||||    
T  32414908 aaaattggacatgtattttgaaacggagggagta 32414941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 17213926 - 17214046
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatg 118  Q
    |||||||| ||||| |||||| ||||||||||||| |||||| ||||| |||  |||||||||||   ||||||||||||||||  |||| |  ||||||    
T  17213926 aaacaacatcttacatgctaatatttgtatttataaattagttaaaaagtatagtcaaagtaagtcaaatgaatagtgcacattgcaaaaattagacatg 17214025  T
Q  119 tatttagaaatagagggagta 139  Q
    ||||| ||||| |||||||||    
T  17214026 tattttgaaatggagggagta 17214046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 139
Target Start/End: Complemental strand, 29790326 - 29790206
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatg 118  Q
    |||||||||||||| |||||| |||||||||||||||||||| ||||| |||| || ||||||||    ||||||||  |||||  |||||| |||||||    
T  29790326 aaacaacaacttacatgctaatatttgtatttatatattagttaaaaattatggtccaagtaagtcatgtgaatagtatacattgcaaaattgcgacatg 29790227  T
Q  119 tatttagaaatagagggagta 139  Q
    ||||| |||| ||| ||||||    
T  29790226 tattttgaaacagatggagta 29790206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 29 - 123
Target Start/End: Original strand, 14214065 - 14214159
Alignment:
Q  29 ttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtattt 123  Q
    |||| ||||||||||| |||||||||||| || |||||||| | |||||  |||| ||||||||| |||||||| ||||||| ||||||||||||    
T  14214065 ttacatgctaacatttatatttatatattggttaaaaaatacggtcaaaacaagtcggatgaataatgcacattataaaattgcgacatgtattt 14214159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 141
Target Start/End: Original strand, 24624083 - 24624205
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatg 118  Q
    |||||||| ||||| |||||| |||||||||||||||||||| ||||| |||| |||||||||||    |||||||||||||||  |||| |   |||||    
T  24624083 aaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattgaacatg 24624182  T
Q  119 tatttagaaatagagggagtagt 141  Q
    ||||| ||||  |||||||||||    
T  24624183 tattttgaaacggagggagtagt 24624205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 128
Target Start/End: Complemental strand, 15337608 - 15337499
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatg 118  Q
    ||||||||  |||| |||||| |||||||||||||||||||| |||||||||| ||||||||||||   |||||| |||| ||| |||||||  || |||    
T  15337608 aaacaacattttacatgctaatatttgtatttatatattagttaaaaaatatggtcaaagtaagttatgtgaataatgcatattgtaaaattgtgaaatg 15337509  T
Q  119 tatttagaaa 128  Q
    ||||| ||||    
T  15337508 tattttgaaa 15337499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 139
Target Start/End: Original strand, 18668817 - 18668950
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| ||||||||||||| |||||| |||||||||| |||||| ||||    |||||||||||||||  |    
T  18668817 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagcaagtcaagtgaatagtgcacattgca 18668916  T
Q  106 aaattacgacatgtatttagaaatagagggagta 139  Q
    ||| |  ||||||||||| ||||  |||||||||    
T  18668917 aaaattggacatgtattttgaaacggagggagta 18668950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 139
Target Start/End: Original strand, 19088087 - 19088220
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| |||||||||||||||||||| ||||| | || |||||||||||    |||||||||||||||  |    
T  19088087 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtttggtcaaagtaagtcaagtgaatagtgcacattgca 19088186  T
Q  106 aaattacgacatgtatttagaaatagagggagta 139  Q
    ||| |  ||||||||||| ||||  |||||||||    
T  19088187 aaaattggacatgtattttgaaacggagggagta 19088220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 128
Target Start/End: Complemental strand, 31869824 - 31869719
Alignment:
Q  23 aacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtatt 122  Q
    |||| ||||| ||||||||||||||||||||||||||| |||||| ||| ||||||||| ||    |||||||| ||||| ||||||  |||||||||||    
T  31869824 aacatcttacatgctaacatttgtatttatatattagttaaaaaaaatggtcaaagtaaattatgggaatagtgtacattgtaaaatcgcgacatgtatt 31869725  T
Q  123 tagaaa 128  Q
    | ||||    
T  31869724 ttgaaa 31869719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 142
Target Start/End: Complemental strand, 6563359 - 6563223
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| |||||||||||||||||||| ||||| |||| |||||||||||    | |||||||||||||  |    
T  6563359 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtaaatagtgcacattgca 6563260  T
Q  106 aaattacgacatgtatttagaaatagagggagtagta 142  Q
    ||| |   |||||||||| ||||  ||||||||||||    
T  6563259 aaaattgaacatgtattttgaaacggagggagtagta 6563223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 145
Target Start/End: Original strand, 20226427 - 20226566
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||  ||||| |||||| ||||||||||||| |||||| ||||| |||| |||||||||||   ||||||||||||||||  |    
T  20226427 gtcgagacaaatcaaacaacgtcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgca 20226526  T
Q  106 aaattacgacatgtatttagaaatagagggagtagtaatt 145  Q
    ||| |   |||||||||| |||| | |||||||| |||||    
T  20226527 aaaattgtacatgtattttgaaacatagggagtattaatt 20226566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 145
Target Start/End: Original strand, 22120411 - 22120550
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||  ||||| |||||| ||||||||||||| |||||| ||||| |||| |||||||||||   ||||||||||||||||  |    
T  22120411 gtcgagacaaatcaaacaacgtcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgca 22120510  T
Q  106 aaattacgacatgtatttagaaatagagggagtagtaatt 145  Q
    ||| |   |||||||||| |||| | |||||||| |||||    
T  22120511 aaaattgtacatgtattttgaaacatagggagtattaatt 22120550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 102
Target Start/End: Complemental strand, 4440969 - 4440887
Alignment:
Q  20 aacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatt 102  Q
    ||||||| ||||| ||||||||||||||||||||| |||   ||||| |||| ||||||||||||  ||||||||||||||||    
T  4440969 aacaacatcttacatgctaacatttgtatttatatgttacctaaaaagtatggtcaaagtaagttatatgaatagtgcacatt 4440887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 132
Target Start/End: Complemental strand, 29694000 - 29693890
Alignment:
Q  22 caacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtat 121  Q
    ||||||||||| |||||  |||||||||||||||||||| ||||| |||| |||||| ||||    |||||||| ||||||  ||||||  |||||||||    
T  29694000 caacaacttacatgctagtatttgtatttatatattagttaaaaattatggtcaaagcaagtcatgtgaatagtacacattgcaaaattgtgacatgtat 29693901  T
Q  122 ttagaaataga 132  Q
    || ||||||||    
T  29693900 tttgaaataga 29693890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 29 - 102
Target Start/End: Original strand, 10298725 - 10298798
Alignment:
Q  29 ttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatt 102  Q
    |||| ||||||||||||||||||||||||||| |||||||||| ||||| |||| |   |||||||||||||||    
T  10298725 ttacatgctaacatttgtatttatatattagtgaaaaaatatggtcaaattaagctatgtgaatagtgcacatt 10298798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 23158051 - 23158116
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagtt 84  Q
    |||||||| ||||| || |||||||||||||||||||||||| ||||||| || ||||||||||||    
T  23158051 aaacaacatcttacatgttaacatttgtatttatatattagttaaaaaatgtggtcaaagtaagtt 23158116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 139
Target Start/End: Complemental strand, 32671949 - 32671816
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| |||||  ||||| ||||||||||||| |||||| ||||| |||| |||||||||||    |||||||||||||||  |    
T  32671949 gtcgagacaaatcaaacaacatcttacacgctaatatttgtatttatacattagttaaaaattatggtcaaagtaagtgaagtgaatagtgcacattgca 32671850  T
Q  106 aaattacgacatgtatttagaaatagagggagta 139  Q
    ||| |  ||||||||||| ||||  |||||||||    
T  32671849 aaaattggacatgtattttgaaacggagggagta 32671816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 139
Target Start/End: Complemental strand, 4148051 - 4147931
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatg 118  Q
    |||||||| ||||| |||||| ||||||||||||| |||||| ||||| |||| |||||||||||    |||||| ||||||||  |||| |  ||||||    
T  4148051 aaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacattgcaaaaattggacatg 4147952  T
Q  119 tatttagaaatagagggagta 139  Q
    ||||| ||||  |||||||||    
T  4147951 tattttgaaacggagggagta 4147931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 17155268 - 17155160
Alignment:
Q  20 aacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgt 119  Q
    ||||||| ||||| ||||||||||||||||||||| ||||| |  || |||| |||||||| ||    ||||||||| |||||||||||  |||||||||    
T  17155268 aacaacatcttacatgctaacatttgtatttatatgttagttatgaagtatgatcaaagtaggtcatgtgaatagtgaacattttaaaaaaacgacatgt 17155169  T
Q  120 atttagaaa 128  Q
    |||| ||||    
T  17155168 attttgaaa 17155160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 15383059 - 15383181
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| ||||||||||||| |||||| ||||| |||| | |||||||||   ||||||| ||||||||  |    
T  15383059 gtcgagaaaaatcaaacaacatcttacatgctaatatttgtatttatagattagttaaaaagtatggttaaagtaagtcaaatgaataatgcacattgca 15383158  T
Q  106 aaattacgacatgtatttagaaa 128  Q
    ||| |  ||||||||||| ||||    
T  15383159 aaaattggacatgtattttgaaa 15383181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 22054905 - 22054783
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| ||||||||||||| |||||| ||||| |||| |||||||||||    ||||||||||| |||  |    
T  22054905 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcatattgca 22054806  T
Q  106 aaattacgacatgtatttagaaa 128  Q
    ||| |  ||||||||||| ||||    
T  22054805 aaaattggacatgtattttgaaa 22054783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 17257793 - 17257913
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatg 118  Q
    |||||||| ||||| |||||| |||||||||| || |||||| ||||| |||| |||||||||||    |||||| ||||||||  |||| |  ||||||    
T  17257793 aaacaacatcttacatgctaatatttgtatttgtacattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacattgcaaaaattagacatg 17257892  T
Q  119 tatttagaaatagagggagta 139  Q
    ||||| |||| ||| ||||||    
T  17257893 tattttgaaacagatggagta 17257913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 1260541 - 1260490
Alignment:
Q  28 cttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagt 79  Q
    ||||| |||||||| |||||||||||||||||| |||||||||| |||||||    
T  1260541 cttacgtgctaacaattgtatttatatattagttaaaaaatatggtcaaagt 1260490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 3623856 - 3623913
Alignment:
Q  23 aacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaa 81  Q
    |||| ||||| |||||||||||||||||||||||||||  ||||||||| |||||||||    
T  3623856 aacatcttacatgctaacatttgtatttatatattagt-taaaaatatggtcaaagtaa 3623913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 5495369 - 5495311
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaa 77  Q
    |||||| | ||||| ||||||||||||||||||||||||||| |||||| ||| |||||    
T  5495369 aaacaaaatcttacatgctaacatttgtatttatatattagttaaaaaacatgatcaaa 5495311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 24955525 - 24955602
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagt 83  Q
    ||||||| | || |||||||| ||||| |||||| ||||||||||||  |||||| |||||||||| ||||| |||||    
T  24955525 gtcgagacaaatcaaacaacatcttacatgctaatatttgtatttattcattagttaaaaaatatgatcaaaataagt 24955602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 102
Target Start/End: Complemental strand, 1040957 - 1040861
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatt 102  Q
    ||||||| | || |||||||| ||||| || ||| ||||||||||||| |||||| ||||| |||| ||||||||| |    |||||||||||||||    
T  1040957 gtcgagacaaatcaaacaacatcttacatgttaatatttgtatttatacattagttaaaaagtatggtcaaagtaaatcaagtgaatagtgcacatt 1040861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 8101716 - 8101668
Alignment:
Q  23 aacaacttacctgctaacatttgtatttatatattagtcaaaaaatatg 71  Q
    |||| ||||| || |||||||||||||||||||||||| ||||||||||    
T  8101716 aacatcttacatgttaacatttgtatttatatattagttaaaaaatatg 8101668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 19240743 - 19240799
Alignment:
Q  28 cttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagtt 84  Q
    ||||| ||| || |||||||||||||||||||| |||||||||| ||||| ||||||    
T  19240743 cttacttgcaaatatttgtatttatatattagttaaaaaatatggtcaaaataagtt 19240799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 2360110 - 2360027
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatt 102  Q
    ||||||||  |||| ||||||||||| ||||||||||||||| ||||| |||  ||||||||| ||  || |||||| ||||||    
T  2360110 aaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaaattatataaatagtacacatt 2360027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 21540793 - 21540884
Alignment:
Q  41 atttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtatttagaaataga 132  Q
    ||||||||||||| | ||||  |||| |||| |||||||||||   |||||||||||||||| ||||| |   |||||||||| ||||||||    
T  21540793 atttgtatttataaactagtttaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgtaaaaattaaacatgtattttgaaataga 21540884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 123
Target Start/End: Original strand, 3989393 - 3989509
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| |||||| | ||||||||| | |||||| ||||| |||| |||||||||||    |||||||||||||||  |    
T  3989393 gtcgagacaaatcaaacaacatcttacatgctaatagttgtattta-acattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgca 3989491  T
Q  106 aaattacgacatgtattt 123  Q
    ||| |  |||||||||||    
T  3989492 aaaattggacatgtattt 3989509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 20437155 - 20437260
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattag-tcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacat 117  Q
    |||||||| ||||| || | | ||||||||||||| ||||| | |||||||||| |||||||||||    |||||||||||||||  |||| |  |||||    
T  20437155 aaacaacatcttacatgttgatatttgtatttatacattagttaaaaaaatatgatcaaagtaagtcaagtgaatagtgcacattgcaaaaattagacat 20437254  T
Q  118 gtattt 123  Q
    ||||||    
T  20437255 gtattt 20437260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 84
Target Start/End: Original strand, 6188634 - 6188670
Alignment:
Q  48 tttatatattagtcaaaaaatatgttcaaagtaagtt 84  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  6188634 tttatatattagtaaaaaaatatgctcaaagtaagtt 6188670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 84
Target Start/End: Original strand, 26567296 - 26567352
Alignment:
Q  29 ttacctgctaacatttgtatttatatattag-tcaaaaaatatgttcaaagtaagtt 84  Q
    |||| ||||| ||||| |||||||||||||| | |||||||||| ||||||||||||    
T  26567296 ttacatgctaccatttatatttatatattagttaaaaaaatatgatcaaagtaagtt 26567352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 123
Target Start/End: Complemental strand, 4059 - 3964
Alignment:
Q  28 cttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgtattt 123  Q
    ||||| ||||||||||||||||||||||||||| |||||||||| |||||||||| |   |||||||||| |||  ||||||||| || |||||||    
T  4059 cttacatgctaacatttgtatttatatattagttaaaaaatatggtcaaagtaagctatgtgaatagtgcgcatcgtaaaattacaacttgtattt 3964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 110
Target Start/End: Original strand, 8975 - 9066
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaatt 110  Q
    |||||||| ||||| ||||||||||||||||||||||||||| ||||||| || ||||||||||||   |||||| |||| ||| |||||||    
T  8975 aaacaacatcttacatgctaacatttgtatttatatattagttaaaaaatgtggtcaaagtaagttatgtgaataatgcatattgtaaaatt 9066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 110
Target Start/End: Original strand, 138172 - 138263
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaatt 110  Q
    |||||||| ||||| ||||||||||||||||||||||||||| ||||||| || ||||||||||||   |||||| |||| ||| |||||||    
T  138172 aaacaacatcttacatgctaacatttgtatttatatattagttaaaaaatgtggtcaaagtaagttatgtgaataatgcatattgtaaaatt 138263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 67898 - 68020
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| ||||| || ||| ||||||||||||| |||||| ||||| |||| |||||||||||   ||||||||||||||||| |    
T  67898 gtcgagacaaatcaaacaacatcttacatgttaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacatttca 67997  T
Q  106 aaattacgacatgtatttagaaa 128  Q
    ||| |  ||||||||||| ||||    
T  67998 aaaattggacatgtattttgaaa 68020  T

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Target: scaffold0003 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 161979 - 162099
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatg 118  Q
    |||||||| ||||| |||||| ||||||||||||| |||||| ||||| |||| |||| ||||||    |||||||||||||||  |||| |  ||||||    
T  161979 aaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaatgtaagtcaagtgaatagtgcacattacaaaaattagacatg 162078  T
Q  119 tatttagaaatagagggagta 139  Q
    ||||| ||||  |||||||||    
T  162079 tattttgaaacggagggagta 162099  T

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Target: scaffold0262 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 110
Target Start/End: Complemental strand, 22900 - 22809
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaatt 110  Q
    |||||||| ||||| ||||||||||||||||||||||| ||| ||||||| || ||||| ||||||   |||||| |||| ||| |||||||    
T  22900 aaacaacatcttacatgctaacatttgtatttatatatgagttaaaaaatgtggtcaaaataagttatgtgaataatgcatattgtaaaatt 22809  T

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Target: scaffold0099 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 28809 - 28899
Alignment:
Q  34 tgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatag-tgcacattttaaaattacgacatgtattt 123  Q
    |||||| ||||||||||||| |||||| |||||||||| |||||||||| |   ||||||| |||||||| ||||| || |||||||||||    
T  28809 tgctaatatttgtatttataaattagttaaaaaatatggtcaaagtaagctatgtgaatagttgcacattgtaaaactatgacatgtattt 28899  T

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Target: scaffold0022 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 139
Target Start/End: Original strand, 100776 - 100909
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatttta 105  Q
    ||||||| | || |||||||| |||||  ||||| ||||||||||||| |||||| ||||| |||| |||||||||||    |||||||||||||||  |    
T  100776 gtcgagacaaatcaaacaacatcttacacgctaatatttgtatttatacattagttaaaaattatggtcaaagtaagtcaagtgaatagtgcacattgca 100875  T
Q  106 aaattacgacatgtatttagaaatagagggagta 139  Q
    ||| |   |||||||||| ||||  |||||||||    
T  100876 aaagttgaacatgtattttgaaacggagggagta 100909  T

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Target: scaffold0295 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 13846 - 13942
Alignment:
Q  6 gtcgagagagatgaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatt 102  Q
    ||||||| | || |||||||| ||||| |||||| |||| |||||||| |||||| ||||| |||| |||||||||||    |||||||||||||||    
T  13846 gtcgagacaaattaaacaacatcttacatgctaatatttatatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacatt 13942  T

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Target: scaffold0009 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 53562 - 53628
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttg 85  Q
    |||||||| ||| | |||||| ||||||| |||||||||||| |||||||||| |||||| ||||||    
T  53562 aaacaacatcttgcatgctaaaatttgtaattatatattagttaaaaaatatgatcaaagcaagttg 53628  T

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Target: scaffold0009; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 128
Target Start/End: Original strand, 217017 - 217127
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatatta-gtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacat 117  Q
    |||||||| ||||  |||||||||||||||||||||||||  | |||||||||| ||||  ||||||    ||||| |||||||| ||||||| |||| |    
T  217017 aaacaacatcttatatgctaacatttgtatttatatattacttaaaaaaatatggtcaacataagttatgagaatattgcacattgtaaaattgcgactt 217116  T
Q  118 gtatttagaaa 128  Q
    |||||| ||||    
T  217117 gtattttgaaa 217127  T

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Target: scaffold0056 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 139
Target Start/End: Complemental strand, 71080 - 70961
Alignment:
Q  19 aaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatg 118  Q
    |||||||| ||||  |||||| ||||||||||||| ||||||  ||||||||| ||||| |||||    ||||||||||| |||  |||| |  ||||||    
T  71080 aaacaacatcttaaatgctaatatttgtatttatacattagt-taaaaatatggtcaaaataagtcaagtgaatagtgcatattgcaaaaattggacatg 70982  T
Q  119 tatttagaaatagagggagta 139  Q
    ||||| ||||| |||||||||    
T  70981 tattttgaaatggagggagta 70961  T

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Target: scaffold0608 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 1631 - 1574
Alignment:
Q  28 cttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttg 85  Q
    ||||| |||||| ||||||||||||| |||| | |||||||||| | |||||||||||    
T  1631 cttacatgctaatatttgtatttatacattaattaaaaaatatgattaaagtaagttg 1574  T

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