View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11374_low_41 (Length: 243)

Name: NF11374_low_41
Description: NF11374
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11374_low_41
NF11374_low_41
[»] chr7 (46 HSPs)
chr7 (15-107)||(44141407-44141499)
chr7 (169-240)||(12012457-12012528)
chr7 (47-104)||(17356960-17357017)
chr7 (47-107)||(21276619-21276679)
chr7 (15-107)||(21766506-21766598)
chr7 (15-103)||(31657420-31657508)
chr7 (15-102)||(6626169-6626256)
chr7 (47-102)||(47404205-47404260)
chr7 (48-105)||(31849437-31849494)
chr7 (47-107)||(18732636-18732696)
chr7 (15-107)||(38816552-38816644)
chr7 (15-107)||(41320662-41320754)
chr7 (47-102)||(6607876-6607931)
chr7 (48-107)||(21438241-21438299)
chr7 (47-101)||(24164017-24164071)
chr7 (15-105)||(48863284-48863374)
chr7 (51-107)||(18046042-18046098)
chr7 (47-82)||(8952766-8952801)
chr7 (47-82)||(19277000-19277035)
chr7 (15-82)||(26174638-26174705)
chr7 (47-82)||(47913142-47913177)
chr7 (47-81)||(39103057-39103091)
chr7 (15-84)||(6607657-6607726)
chr7 (51-84)||(21438600-21438633)
chr7 (51-84)||(24000281-24000314)
chr7 (51-84)||(31849756-31849789)
chr7 (51-84)||(38567827-38567860)
chr7 (51-84)||(41320388-41320421)
chr7 (51-84)||(47913480-47913513)
chr7 (53-84)||(26174953-26174984)
chr7 (47-82)||(35193674-35193709)
chr7 (51-82)||(48863504-48863535)
chr7 (48-82)||(10336142-10336176)
chr7 (54-84)||(39102820-39102850)
chr7 (48-81)||(1795715-1795748)
chr7 (51-80)||(5850833-5850862)
chr7 (51-84)||(6626526-6626559)
chr7 (51-84)||(10336477-10336510)
chr7 (51-84)||(21766869-21766902)
chr7 (51-80)||(24164343-24164372)
chr7 (51-84)||(35193339-35193372)
chr7 (51-84)||(38816258-38816291)
chr7 (51-84)||(39384733-39384766)
chr7 (51-84)||(47403869-47403902)
chr7 (50-102)||(23999924-23999976)
chr7 (47-107)||(39997642-39997702)
[»] chr4 (61 HSPs)
chr4 (15-107)||(42208122-42208214)
chr4 (15-104)||(5814098-5814187)
chr4 (15-106)||(32384227-32384318)
chr4 (15-102)||(43979277-43979364)
chr4 (15-91)||(13199327-13199403)
chr4 (15-103)||(42495932-42496020)
chr4 (47-107)||(47690646-47690706)
chr4 (47-106)||(30560656-30560715)
chr4 (48-102)||(41965144-41965198)
chr4 (15-107)||(1613939-1614031)
chr4 (47-107)||(32328389-32328449)
chr4 (47-107)||(52096564-52096624)
chr4 (47-102)||(321651-321706)
chr4 (47-102)||(31317261-31317316)
chr4 (15-107)||(42598908-42598999)
chr4 (47-105)||(45226361-45226419)
chr4 (15-84)||(16335077-16335146)
chr4 (47-116)||(18436779-18436848)
chr4 (47-84)||(43980130-43980167)
chr4 (15-107)||(16335381-16335473)
chr4 (47-107)||(46008545-46008605)
chr4 (47-102)||(919531-919586)
chr4 (47-102)||(8444660-8444715)
chr4 (47-102)||(28693248-28693303)
chr4 (47-102)||(43562048-43562103)
chr4 (15-102)||(45311558-45311645)
chr4 (47-82)||(49264228-49264263)
chr4 (47-102)||(51892987-51893042)
chr4 (48-82)||(40005768-40005802)
chr4 (56-102)||(45848387-45848433)
chr4 (51-84)||(322005-322038)
chr4 (51-84)||(13198994-13199027)
chr4 (51-84)||(15168934-15168967)
chr4 (15-112)||(15169296-15169393)
chr4 (51-84)||(23205720-23205753)
chr4 (51-84)||(32384116-32384149)
chr4 (51-84)||(40147372-40147405)
chr4 (51-84)||(42496288-42496321)
chr4 (51-84)||(46008981-46009014)
chr4 (49-102)||(51716124-51716177)
chr4 (47-84)||(51716479-51716516)
chr4 (51-84)||(51892684-51892717)
chr4 (47-107)||(1922492-1922552)
chr4 (47-107)||(23206018-23206078)
chr4 (51-83)||(31317586-31317618)
chr4 (51-83)||(41965498-41965530)
chr4 (51-82)||(40147625-40147656)
chr4 (54-84)||(919199-919229)
chr4 (54-84)||(10616483-10616513)
chr4 (54-84)||(32328082-32328112)
chr4 (51-85)||(42207886-42207920)
chr4 (51-81)||(45848631-45848661)
chr4 (51-84)||(8445016-8445049)
chr4 (47-84)||(28692974-28693011)
chr4 (51-84)||(35378018-35378051)
chr4 (47-84)||(39210611-39210648)
chr4 (51-84)||(40005437-40005470)
chr4 (51-84)||(49263895-49263928)
chr4 (51-84)||(53940703-53940736)
chr4 (54-102)||(11021309-11021357)
chr4 (53-105)||(49148167-49148219)
[»] chr6 (36 HSPs)
chr6 (15-106)||(6390236-6390327)
chr6 (47-107)||(5997548-5997608)
chr6 (15-102)||(21002771-21002858)
chr6 (15-102)||(33705804-33705891)
chr6 (48-102)||(6535410-6535464)
chr6 (47-84)||(3199328-3199365)
chr6 (47-107)||(12396019-12396079)
chr6 (47-107)||(14630811-14630871)
chr6 (47-102)||(605797-605852)
chr6 (47-102)||(5146821-5146876)
chr6 (47-102)||(9566399-9566454)
chr6 (15-102)||(10143536-10143623)
chr6 (47-86)||(14444928-14444967)
chr6 (15-82)||(16408761-16408828)
chr6 (47-106)||(17204217-17204276)
chr6 (47-82)||(32218865-32218900)
chr6 (48-107)||(33243527-33243586)
chr6 (51-84)||(6535739-6535772)
chr6 (51-84)||(9566017-9566050)
chr6 (51-84)||(10143232-10143265)
chr6 (51-112)||(16409100-16409161)
chr6 (51-84)||(33360468-33360501)
chr6 (47-80)||(33877814-33877847)
chr6 (51-83)||(1827078-1827110)
chr6 (51-82)||(583683-583714)
chr6 (51-82)||(32219205-32219236)
chr6 (47-82)||(33360805-33360840)
chr6 (48-102)||(3199548-3199602)
chr6 (48-102)||(21904868-21904922)
chr6 (51-84)||(2793055-2793088)
chr6 (51-84)||(5997214-5997247)
chr6 (55-84)||(16120574-16120603)
chr6 (51-84)||(17203886-17203919)
chr6 (51-84)||(21905418-21905451)
chr6 (51-84)||(22695576-22695609)
chr6 (51-84)||(33243190-33243223)
[»] chr1 (62 HSPs)
chr1 (15-107)||(14556336-14556428)
chr1 (15-116)||(5132415-5132516)
chr1 (15-107)||(28486618-28486710)
chr1 (47-102)||(5905088-5905143)
chr1 (15-82)||(6782589-6782656)
chr1 (15-107)||(38872508-38872600)
chr1 (47-107)||(44396397-44396457)
chr1 (47-107)||(44519694-44519754)
chr1 (15-102)||(1342756-1342843)
chr1 (47-102)||(2937132-2937187)
chr1 (47-106)||(29721441-29721500)
chr1 (47-102)||(32487217-32487272)
chr1 (15-102)||(37350943-37351030)
chr1 (47-102)||(40125138-40125193)
chr1 (48-106)||(36302784-36302842)
chr1 (15-84)||(1342453-1342522)
chr1 (47-107)||(1366300-1366360)
chr1 (47-107)||(28838099-28838159)
chr1 (47-83)||(30056949-30056985)
chr1 (47-107)||(47648212-47648272)
chr1 (47-102)||(2731063-2731118)
chr1 (15-82)||(23253649-23253716)
chr1 (15-82)||(36466259-36466326)
chr1 (47-102)||(38019320-38019375)
chr1 (15-82)||(45951228-45951295)
chr1 (15-82)||(47672267-47672334)
chr1 (15-82)||(50755983-50756050)
chr1 (51-84)||(1366632-1366665)
chr1 (51-84)||(2930982-2931015)
chr1 (51-84)||(32486880-32486913)
chr1 (51-84)||(39524290-39524323)
chr1 (51-84)||(45950924-45950957)
chr1 (50-82)||(29548604-29548636)
chr1 (47-107)||(49628447-49628507)
chr1 (50-105)||(4487039-4487094)
chr1 (51-82)||(6782920-6782951)
chr1 (47-82)||(17077684-17077719)
chr1 (51-82)||(25378711-25378742)
chr1 (51-82)||(30057287-30057318)
chr1 (53-84)||(37351294-37351325)
chr1 (53-84)||(38717691-38717722)
chr1 (51-86)||(39950557-39950592)
chr1 (51-102)||(52346232-52346283)
chr1 (54-84)||(25378969-25378999)
chr1 (54-84)||(28838465-28838495)
chr1 (54-84)||(47647879-47647909)
chr1 (51-84)||(2730758-2730791)
chr1 (51-84)||(5132690-5132723)
chr1 (51-84)||(28486980-28487013)
chr1 (55-84)||(32005713-32005742)
chr1 (53-82)||(36302451-36302480)
chr1 (51-84)||(38872868-38872901)
chr1 (51-80)||(39758976-39759005)
chr1 (51-80)||(39764330-39764359)
chr1 (47-80)||(39950257-39950290)
chr1 (51-84)||(47672021-47672054)
chr1 (51-84)||(49628148-49628181)
chr1 (51-80)||(50755682-50755711)
chr1 (47-79)||(7838963-7838995)
chr1 (51-79)||(23253351-23253379)
chr1 (47-79)||(38717352-38717384)
chr1 (51-83)||(44519362-44519394)
[»] scaffold0015 (2 HSPs)
scaffold0015 (47-106)||(50071-50130)
scaffold0015 (51-84)||(49738-49771)
[»] chr8 (35 HSPs)
chr8 (47-105)||(9855662-9855720)
chr8 (15-102)||(10496013-10496100)
chr8 (15-107)||(43857778-43857870)
chr8 (47-102)||(4528644-4528699)
chr8 (15-102)||(27696990-27697077)
chr8 (47-104)||(32924047-32924104)
chr8 (47-107)||(7050467-7050527)
chr8 (47-102)||(10837524-10837579)
chr8 (47-102)||(17696956-17697011)
chr8 (47-106)||(26695407-26695466)
chr8 (47-102)||(37405876-37405931)
chr8 (15-81)||(34181178-34181244)
chr8 (47-105)||(42686023-42686081)
chr8 (51-84)||(2705498-2705531)
chr8 (51-84)||(7050884-7050917)
chr8 (51-84)||(10837187-10837220)
chr8 (51-84)||(27696717-27696750)
chr8 (51-84)||(30794828-30794861)
chr8 (51-84)||(34181491-34181524)
chr8 (51-84)||(41441435-41441468)
chr8 (50-102)||(2705166-2705218)
chr8 (47-103)||(7229970-7230026)
chr8 (47-82)||(2057079-2057114)
chr8 (47-102)||(2232977-2233032)
chr8 (51-102)||(10495725-10495776)
chr8 (47-102)||(30795133-30795188)
chr8 (47-102)||(42216258-42216313)
chr8 (54-84)||(32923745-32923775)
chr8 (55-84)||(2056741-2056770)
chr8 (51-84)||(2232753-2232786)
chr8 (51-84)||(4528975-4529008)
chr8 (51-84)||(9855328-9855361)
chr8 (51-84)||(17696631-17696664)
chr8 (51-84)||(26695765-26695798)
chr8 (51-84)||(42216615-42216648)
[»] chr3 (42 HSPs)
chr3 (48-106)||(19987834-19987892)
chr3 (15-107)||(21440966-21441058)
chr3 (47-111)||(49665651-49665715)
chr3 (47-106)||(16222474-16222533)
chr3 (48-111)||(40790803-40790866)
chr3 (15-82)||(44397948-44398015)
chr3 (15-82)||(47358479-47358546)
chr3 (47-107)||(35565426-35565486)
chr3 (15-107)||(40036644-40036736)
chr3 (48-84)||(44638620-44638656)
chr3 (47-82)||(21561155-21561190)
chr3 (15-82)||(23460964-23461031)
chr3 (47-102)||(29352677-29352732)
chr3 (47-102)||(33092037-33092092)
chr3 (47-102)||(51437322-51437377)
chr3 (48-82)||(16731942-16731976)
chr3 (48-82)||(27957817-27957851)
chr3 (51-84)||(21441297-21441330)
chr3 (54-107)||(27940733-27940786)
chr3 (51-84)||(27957481-27957514)
chr3 (51-84)||(47358171-47358204)
chr3 (51-84)||(51754256-51754289)
chr3 (47-102)||(3017254-3017310)
chr3 (51-83)||(29352426-29352458)
chr3 (47-107)||(47982683-47982743)
chr3 (47-107)||(47991970-47992030)
chr3 (47-107)||(48001257-48001317)
chr3 (47-107)||(48010544-48010604)
chr3 (47-99)||(51753901-51753953)
chr3 (51-107)||(54090168-54090224)
chr3 (47-102)||(29015721-29015776)
chr3 (47-82)||(38443639-38443674)
chr3 (47-82)||(44638436-44638471)
chr3 (51-84)||(3017531-3017564)
chr3 (51-80)||(16222836-16222865)
chr3 (51-84)||(19988196-19988229)
chr3 (51-84)||(19988227-19988260)
chr3 (51-80)||(23461190-23461219)
chr3 (51-84)||(34682300-34682333)
chr3 (51-80)||(35565067-35565096)
chr3 (51-84)||(44398235-44398268)
chr3 (48-80)||(55328466-55328498)
[»] chr2 (49 HSPs)
chr2 (47-105)||(18906924-18906982)
chr2 (15-102)||(9777295-9777382)
chr2 (47-106)||(11108762-11108821)
chr2 (15-102)||(32928037-32928124)
chr2 (47-116)||(32503968-32504037)
chr2 (17-106)||(42434974-42435063)
chr2 (47-106)||(3963379-3963439)
chr2 (47-107)||(7900258-7900318)
chr2 (47-107)||(25263704-25263764)
chr2 (47-107)||(34825680-34825740)
chr2 (15-107)||(40691394-40691486)
chr2 (47-107)||(42813873-42813933)
chr2 (47-102)||(430576-430631)
chr2 (15-102)||(18707846-18707933)
chr2 (15-82)||(32653837-32653904)
chr2 (51-105)||(39060406-39060460)
chr2 (15-84)||(4902921-4902990)
chr2 (15-107)||(33850777-33850869)
chr2 (47-82)||(970793-970828)
chr2 (47-102)||(3952269-3952324)
chr2 (47-102)||(5674348-5674403)
chr2 (15-102)||(11277998-11278085)
chr2 (15-106)||(19591678-19591769)
chr2 (15-105)||(18478376-18478466)
chr2 (51-84)||(430878-430911)
chr2 (51-84)||(2098624-2098657)
chr2 (51-84)||(9776992-9777025)
chr2 (51-84)||(18707514-18707547)
chr2 (51-84)||(32504340-32504373)
chr2 (51-84)||(32927731-32927764)
chr2 (51-84)||(40691643-40691676)
chr2 (47-107)||(8031069-8031129)
chr2 (15-79)||(14102598-14102662)
chr2 (51-107)||(28625461-28625517)
chr2 (47-107)||(41186247-41186307)
chr2 (51-82)||(14827855-14827886)
chr2 (51-84)||(970458-970491)
chr2 (51-84)||(4902644-4902677)
chr2 (51-84)||(4950042-4950075)
chr2 (47-84)||(5674016-5674053)
chr2 (51-84)||(16265606-16265639)
chr2 (51-84)||(18478652-18478685)
chr2 (51-84)||(33850474-33850507)
chr2 (51-84)||(34826043-34826076)
chr2 (51-84)||(41186605-41186638)
chr2 (51-84)||(42814315-42814348)
chr2 (51-84)||(45002866-45002899)
chr2 (51-83)||(28625826-28625858)
chr2 (51-107)||(30415207-30415263)
[»] chr5 (46 HSPs)
chr5 (15-112)||(5214259-5214356)
chr5 (47-103)||(3578001-3578057)
chr5 (48-107)||(974182-974241)
chr5 (15-106)||(4717136-4717227)
chr5 (15-102)||(11062351-11062438)
chr5 (15-102)||(26408960-26409047)
chr5 (15-107)||(2268577-2268669)
chr5 (47-103)||(9177214-9177270)
chr5 (47-102)||(22619788-22619843)
chr5 (15-82)||(23910623-23910690)
chr5 (15-102)||(39412155-39412242)
chr5 (48-102)||(4621026-4621080)
chr5 (48-102)||(8343045-8343099)
chr5 (50-102)||(8145030-8145082)
chr5 (47-107)||(20166060-20166120)
chr5 (15-82)||(17964972-17965039)
chr5 (47-82)||(18036242-18036277)
chr5 (15-82)||(38245064-38245131)
chr5 (15-82)||(38789972-38790039)
chr5 (51-84)||(2268248-2268281)
chr5 (15-84)||(9176979-9177048)
chr5 (51-84)||(16969044-16969077)
chr5 (49-82)||(18674205-18674238)
chr5 (51-84)||(20166425-20166458)
chr5 (47-84)||(23910316-23910353)
chr5 (51-84)||(25945350-25945383)
chr5 (51-84)||(26408658-26408691)
chr5 (51-84)||(27858409-27858442)
chr5 (51-84)||(39412478-39412511)
chr5 (50-82)||(25945685-25945717)
chr5 (51-82)||(13198243-13198274)
chr5 (47-102)||(15440523-15440578)
chr5 (53-84)||(15442980-15443011)
chr5 (51-86)||(17964668-17964703)
chr5 (47-102)||(30491896-30491951)
chr5 (48-107)||(34929536-34929595)
chr5 (48-82)||(2033761-2033795)
chr5 (51-84)||(973847-973880)
chr5 (51-84)||(5907281-5907314)
chr5 (55-84)||(8343392-8343421)
chr5 (51-84)||(11062677-11062710)
chr5 (51-84)||(18705544-18705577)
chr5 (51-84)||(23592811-23592844)
chr5 (47-80)||(30492194-30492227)
chr5 (51-83)||(3023419-3023451)
chr5 (51-83)||(22619469-22619501)
[»] scaffold0275 (1 HSPs)
scaffold0275 (15-102)||(1269-1356)
[»] scaffold0170 (2 HSPs)
scaffold0170 (15-102)||(5512-5599)
scaffold0170 (51-84)||(5814-5847)
[»] scaffold0045 (2 HSPs)
scaffold0045 (47-107)||(35332-35392)
scaffold0045 (51-84)||(35698-35731)
[»] scaffold1095 (1 HSPs)
scaffold1095 (47-102)||(22-77)
[»] scaffold0651 (2 HSPs)
scaffold0651 (47-102)||(6382-6437)
scaffold0651 (47-83)||(6052-6088)
[»] scaffold0385 (1 HSPs)
scaffold0385 (47-106)||(12967-13026)
[»] scaffold0044 (2 HSPs)
scaffold0044 (15-102)||(9859-9946)
scaffold0044 (51-84)||(9607-9640)
[»] scaffold0838 (1 HSPs)
scaffold0838 (57-111)||(5262-5316)
[»] scaffold0832 (1 HSPs)
scaffold0832 (57-111)||(5293-5347)
[»] scaffold0079 (2 HSPs)
scaffold0079 (15-84)||(57714-57783)
scaffold0079 (15-107)||(57387-57479)
[»] scaffold0302 (2 HSPs)
scaffold0302 (51-84)||(14146-14179)
scaffold0302 (47-107)||(14480-14540)
[»] scaffold0825 (1 HSPs)
scaffold0825 (47-82)||(1197-1232)
[»] scaffold0009 (1 HSPs)
scaffold0009 (51-82)||(58778-58809)
[»] scaffold0036 (1 HSPs)
scaffold0036 (51-84)||(17195-17228)


Alignment Details
Target: chr7 (Bit Score: 53; Significance: 2e-21; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 107
Target Start/End: Complemental strand, 44141499 - 44141407
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    |||||||||||| |||||||||||        |||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||    
T  44141499 aaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcagggactaaagacatatttaagccta 44141407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 169 - 240
Target Start/End: Original strand, 12012457 - 12012528
Alignment:
Q  169 taatatattgaaacttcaactaccataaaaataataatttatttattcattctgttcaactactctctgctt 240  Q
    ||||||||| |||| ||||||| || ||||||||||||||||||||||||||||||||||||||| ||||||    
T  12012457 taatatattcaaacctcaactatcacaaaaataataatttatttattcattctgttcaactactccctgctt 12012528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 17356960 - 17357017
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagc 104  Q
    ||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||    
T  17356960 gtgtagggatcaatgccaaaatctgatgaaagtgcaggaactaaagacatatttaagc 17357017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 21276619 - 21276679
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    |||||||||||||||||||||||| ||||||||||||| | |||| |||||||||||||||    
T  21276619 gtgtagggaccaatgccaaaatcttatgaaagtgcagggactaaagacatatttaagccta 21276679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 107
Target Start/End: Complemental strand, 21766598 - 21766506
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    |||||||||||| |||||||||||        |||||||||||||||||||||||||||||||||||| | | |||| |||||||||| ||||    
T  21766598 aaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaaccta 21766506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 31657508 - 31657420
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaag 103  Q
    ||||||||||||||||||||||||        ||||||| ||||||| |||||||||||||||||||||||| ||||  ||||||||||    
T  31657508 aaagtgcagggatcaattccaaacaaaaaaaagtgtaggaaccaatgacaaaatctgatgaaagtgcaggaactaaaggcatatttaag 31657420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 6626256 - 6626169
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    |||||||||||| |||||||||||        |||||||||||||||||||||||||||||||||||| | | |||| ||||||||||    
T  6626256 aaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaa 6626169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 47404205 - 47404260
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    |||||||||||||||||||||||||||||||||||| | | |||||||||||||||    
T  47404205 gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaaacatatttaa 47404260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 31849494 - 31849437
Alignment:
Q  48 tgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagcc 105  Q
    ||||||||||||||||||||||||||||||||||||| | ||||  ||||||||||||    
T  31849494 tgtagggaccaatgccaaaatctgatgaaagtgcagggactaaatgcatatttaagcc 31849437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 18732696 - 18732636
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    |||||||||||||||||||||||||||||||||||| | | |||| |||||||||| ||||    
T  18732696 gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaaccta 18732636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 107
Target Start/End: Original strand, 38816552 - 38816644
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    |||||||||||| |||||||||||        |||||||||||||||||||||||||||||||||||| | | ||||  ||||||||| ||||    
T  38816552 aaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagtcatatttaaaccta 38816644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 107
Target Start/End: Original strand, 41320662 - 41320754
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    |||||||||||| |||||||||||        |||||||||||||||||||||||||||||||||||| | | ||||  ||||||||| ||||    
T  41320662 aaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaatgcatatttaaaccta 41320754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 6607876 - 6607931
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    |||||||||||||||||||||||||||||||||||| | | |||| ||||||||||    
T  6607876 gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaa 6607931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 48 - 107
Target Start/End: Complemental strand, 21438299 - 21438241
Alignment:
Q  48 tgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    ||||||||||||||||||||||||||||||||||||| | |||| |||||||||| ||||    
T  21438299 tgtagggaccaatgccaaaatctgatgaaagtgcaggga-taaagacatatttaaaccta 21438241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 24164071 - 24164017
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatattta 101  Q
    |||||||||||||||||||||||||||||||||||| | | |||| |||||||||    
T  24164071 gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatattta 24164017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 105
Target Start/End: Complemental strand, 48863374 - 48863284
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagcc 105  Q
    |||||||| |||||||||||||||         ||||||||||||||||||||||||| ||||||||||| | ||||  ||||||||||||    
T  48863374 aaagtgcatggatcaattccaaacaaaaaaaaatgtagggaccaatgccaaaatctgaggaaagtgcagggactaaaggcatatttaagcc 48863284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 51 - 107
Target Start/End: Complemental strand, 18046098 - 18046042
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    |||||||||||||||||| ||||||||||||||| | |||  |||||||||||||||    
T  18046098 agggaccaatgccaaaatttgatgaaagtgcagggactaatcacatatttaagccta 18046042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 82
Target Start/End: Original strand, 8952766 - 8952801
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgca 82  Q
    ||||||||||||||||||||||||||||||||||||    
T  8952766 gtgtagggaccaatgccaaaatctgatgaaagtgca 8952801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 82
Target Start/End: Original strand, 19277000 - 19277035
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgca 82  Q
    ||||||||||||||||||||||||||||||||||||    
T  19277000 gtgtagggaccaatgccaaaatctgatgaaagtgca 19277035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 26174705 - 26174638
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgca 82  Q
    |||||||||||| |||||||||||         |||||||||||||||||||||||||||||||||||    
T  26174705 aaagtgcagggaccaattccaaacaaaaaaaaatgtagggaccaatgccaaaatctgatgaaagtgca 26174638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 82
Target Start/End: Complemental strand, 47913177 - 47913142
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgca 82  Q
    ||||||||||||||||||||||||||||||||||||    
T  47913177 gtgtagggaccaatgccaaaatctgatgaaagtgca 47913142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 81
Target Start/End: Original strand, 39103057 - 39103091
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgc 81  Q
    |||||||||||||||||||||||||||||||||||    
T  39103057 gtgtagggaccaatgccaaaatctgatgaaagtgc 39103091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 6607726 - 6607657
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||| ||||||        ||| ||||||||||||||||||| ||||||||||||||    
T  6607726 aaagtgcagggatcaatgccaaacaaaaaaaagtgcagggaccaatgccaaaatcggatgaaagtgcagg 6607657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 21438600 - 21438633
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  21438600 agggaccaatgccaaaatctgatgaaagtgcagg 21438633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 24000281 - 24000314
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  24000281 agggaccaatgccaaaatctgatgaaagtgcagg 24000314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 31849756 - 31849789
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  31849756 agggaccaatgccaaaatctgatgaaagtgcagg 31849789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 38567827 - 38567860
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  38567827 agggaccaatgccaaaatctgatgaaagtgcagg 38567860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 41320421 - 41320388
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  41320421 agggaccaatgccaaaatctgatgaaagtgcagg 41320388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 47913480 - 47913513
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  47913480 agggaccaatgccaaaatctgatgaaagtgcagg 47913513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 84
Target Start/End: Original strand, 26174953 - 26174984
Alignment:
Q  53 ggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||    
T  26174953 ggaccaatgccaaaatctgatgaaagtgcagg 26174984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 82
Target Start/End: Original strand, 35193674 - 35193709
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgca 82  Q
    ||||||||||||||| ||||||||||||||||||||    
T  35193674 gtgtagggaccaatgtcaaaatctgatgaaagtgca 35193709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 82
Target Start/End: Original strand, 48863504 - 48863535
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgca 82  Q
    ||||||||||||||||||||||||||||||||    
T  48863504 agggaccaatgccaaaatctgatgaaagtgca 48863535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 82
Target Start/End: Complemental strand, 10336176 - 10336142
Alignment:
Q  48 tgtagggaccaatgccaaaatctgatgaaagtgca 82  Q
    |||||||||||||| ||||||||||||||||||||    
T  10336176 tgtagggaccaatgtcaaaatctgatgaaagtgca 10336142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 84
Target Start/End: Complemental strand, 39102850 - 39102820
Alignment:
Q  54 gaccaatgccaaaatctgatgaaagtgcagg 84  Q
    |||||||||||||||||||||||||||||||    
T  39102850 gaccaatgccaaaatctgatgaaagtgcagg 39102820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 81
Target Start/End: Original strand, 1795715 - 1795748
Alignment:
Q  48 tgtagggaccaatgccaaaatctgatgaaagtgc 81  Q
    ||||||||| ||||||||||||||||||||||||    
T  1795715 tgtagggactaatgccaaaatctgatgaaagtgc 1795748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 80
Target Start/End: Original strand, 5850833 - 5850862
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtg 80  Q
    ||||||||||||||||||||||||||||||    
T  5850833 agggaccaatgccaaaatctgatgaaagtg 5850862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 6626526 - 6626559
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||| ||||||||||||||    
T  6626526 agggaccaatgccaaaatcggatgaaagtgcagg 6626559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 10336477 - 10336510
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    |||||| |||||||||||||||||||||||||||    
T  10336477 agggactaatgccaaaatctgatgaaagtgcagg 10336510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 21766869 - 21766902
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||| ||||    
T  21766869 agggaccaatgccaaaatctgatgaaagtacagg 21766902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 80
Target Start/End: Original strand, 24164343 - 24164372
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtg 80  Q
    ||||||||||||||||||||||||||||||    
T  24164343 agggaccaatgccaaaatctgatgaaagtg 24164372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 35193372 - 35193339
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||| ||||||||||||||    
T  35193372 agggaccaatgccaaaatccgatgaaagtgcagg 35193339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 38816291 - 38816258
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    |||||||||| |||||||||||||||||||||||    
T  38816291 agggaccaattccaaaatctgatgaaagtgcagg 38816258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 39384766 - 39384733
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    |||||| |||||||||||||||||||||||||||    
T  39384766 agggactaatgccaaaatctgatgaaagtgcagg 39384733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 47403902 - 47403869
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||| ||||||||||||||||||||||||||||    
T  47403902 agggatcaatgccaaaatctgatgaaagtgcagg 47403869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 23999976 - 23999924
Alignment:
Q  50 tagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    |||| ||||||| |||||||||||||||||||| | | |||| ||||||||||    
T  23999976 taggaaccaatgtcaaaatctgatgaaagtgcaaggactaaagacatatttaa 23999924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 39997702 - 39997642
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    |||||||| |||||| ||||||||||||||||||||   | |||| |||||||||| ||||    
T  39997702 gtgtaggggccaatgtcaaaatctgatgaaagtgcaaagactaaagacatatttaaaccta 39997642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 107
Target Start/End: Original strand, 42208122 - 42208214
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    ||||||||||||||||||||||||        |||||| ||||||||||||||||||||||||||||||| ||||||  ||||||||||||||    
T  42208122 aaagtgcagggatcaattccaaacaaaaaaaagtgtagagaccaatgccaaaatctgatgaaagtgcagggattaaaggcatatttaagccta 42208214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 5814098 - 5814187
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagc 104  Q
    |||||||||||| |||||||||||        |||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||    
T  5814098 aaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcagggactaaagacatatttaagc 5814187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 15 - 106
Target Start/End: Original strand, 32384227 - 32384318
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagcct 106  Q
    |||||||||||| |||||||||||        ||||| |||||||||||||||||||||||||||||||| | |||| ||||||||||||||    
T  32384227 aaagtgcagggaccaattccaaacaaaaaaaagtgtatggaccaatgccaaaatctgatgaaagtgcagggactaaagacatatttaagcct 32384318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 43979364 - 43979277
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    |||||||||||| |||||||||||        |||||||||||||||||||||||||||||||||||| | |||||| ||||||||||    
T  43979364 aaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggattaaagacatatttaa 43979277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 13199327 - 13199403
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaa 91  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||| | ||||||    
T  13199327 aaagtgcagggatcaattccaaacaaaaataagtgtagggaccaatgccaaaatctgatgaaagtgcaaggattaaa 13199403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 42496020 - 42495932
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaag 103  Q
    |||||||||||| |||||||||||        ||||||||||||||| |||||||||||||||||||||| | |||| |||||||||||    
T  42496020 aaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgtcaaaatctgatgaaagtgcagggactaaagacatatttaag 42495932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 47690646 - 47690706
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    |||||||||||||||||||||||||||||||||||||| | |||| |||||||||| ||||    
T  47690646 gtgtagggaccaatgccaaaatctgatgaaagtgcagggactaaagacatatttaaaccta 47690706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 106
Target Start/End: Original strand, 30560656 - 30560715
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagcct 106  Q
    |||| ||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  30560656 gtgttgggaccaatgccaaaatatgatgaaagtgcaggaactaaagacatatttaagcct 30560715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 102
Target Start/End: Complemental strand, 41965198 - 41965144
Alignment:
Q  48 tgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    ||||||||||||||||||||||||||||||||||| | |||||| ||||||||||    
T  41965198 tgtagggaccaatgccaaaatctgatgaaagtgcaaggattaaagacatatttaa 41965144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 107
Target Start/End: Complemental strand, 1614031 - 1613939
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    |||||||||||| |||||||||||        |||||||||||||||||||||||||||||||||||| | | ||||  ||||||||| ||||    
T  1614031 aaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaaccta 1613939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 32328389 - 32328449
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    |||||||||||||||||||||||||||||||||||| | | |||| |||||||||| ||||    
T  32328389 gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaaccta 32328449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 52096624 - 52096564
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    ||||| ||||||||||||||||||||||||| |||||| | |||| |||||||||||||||    
T  52096624 gtgtatggaccaatgccaaaatctgatgaaaatgcagggactaaagacatatttaagccta 52096564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 47 - 102
Target Start/End: Complemental strand, 321706 - 321651
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    |||||||||||||||||||||||||||||||||| | | | |||||||||||||||    
T  321706 gtgtagggaccaatgccaaaatctgatgaaagtgtaaggactaaaaacatatttaa 321651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 47 - 102
Target Start/End: Complemental strand, 31317316 - 31317261
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    |||||||||||||||||||||||||||||||||||| | | |||| ||||||||||    
T  31317316 gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaa 31317261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 107
Target Start/End: Complemental strand, 42598999 - 42598908
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||| | | ||||  ||||||||| ||||    
T  42598999 aaagtgcagggatcaattccaaacaaaaaaa-gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaaccta 42598908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 105
Target Start/End: Original strand, 45226361 - 45226419
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagcc 105  Q
    |||||||||||||||||||||| ||||||||||||||| | ||||  ||||||||||||    
T  45226361 gtgtagggaccaatgccaaaatttgatgaaagtgcagggactaaaggcatatttaagcc 45226419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 16335146 - 16335077
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||| ||||||        ||| ||||||||||||||||||||||||||||||||||    
T  16335146 aaagtgcagggatcaatgccaaacgaaaaaaagtgcagggaccaatgccaaaatctgatgaaagtgcagg 16335077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 18436848 - 18436779
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagcctactttatttt 116  Q
    |||||||||||||||||||||||||||||||||||| | | ||||  ||||||||| || | ||||||||    
T  18436848 gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaaccaaatttatttt 18436779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 84
Target Start/End: Original strand, 43980130 - 43980167
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||||||    
T  43980130 gtgtagggaccaatgccaaaatctgatgaaagtgcagg 43980167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 107
Target Start/End: Original strand, 16335381 - 16335473
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    |||||||||||| |||||||||||        |||||||||||||||||||||| ||||||||||| | | | |||| |||||||||| ||||    
T  16335381 aaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatatgatgaaagtgtaaggactaaatacatatttaaaccta 16335473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 46008605 - 46008545
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    |||||||||||||||||||||||||||||||||||| | | ||||  ||||||||| ||||    
T  46008605 gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaaccta 46008545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 919531 - 919586
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    ||||||||| ||||||||||||||||| ||| || |||||||||| ||||||||||    
T  919531 gtgtagggatcaatgccaaaatctgataaaaatgtaggaattaaagacatatttaa 919586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 102
Target Start/End: Complemental strand, 8444715 - 8444660
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    |||||||||||||||||||||||||||||||||| | | | |||| ||||||||||    
T  8444715 gtgtagggaccaatgccaaaatctgatgaaagtgtaaggactaaagacatatttaa 8444660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 28693248 - 28693303
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    ||||||||||||||| |||||||||||||||||||| | | |||| ||||||||||    
T  28693248 gtgtagggaccaatgacaaaatctgatgaaagtgcaaggactaaagacatatttaa 28693303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 43562048 - 43562103
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    ||||||||||||||||||||||||||||||| |||||| | ||||  |||||||||    
T  43562048 gtgtagggaccaatgccaaaatctgatgaaaatgcagggactaaaggcatatttaa 43562103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 45311558 - 45311645
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    |||||||||||| |||||||||||         |||| |||||||||||||||||||||||||||||| | | |||| ||||||||||    
T  45311558 aaagtgcagggaccaattccaaacaaaaaaaaatgtaaggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaa 45311645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 82
Target Start/End: Original strand, 49264228 - 49264263
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgca 82  Q
    ||||||||||||||||||||||||||||||||||||    
T  49264228 gtgtagggaccaatgccaaaatctgatgaaagtgca 49264263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 51892987 - 51893042
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    ||||||||| |||||||||||||||||||||||||| | | |||| ||||||||||    
T  51892987 gtgtagggatcaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaa 51893042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 82
Target Start/End: Original strand, 40005768 - 40005802
Alignment:
Q  48 tgtagggaccaatgccaaaatctgatgaaagtgca 82  Q
    |||||||||||||||||||||||||||||||||||    
T  40005768 tgtagggaccaatgccaaaatctgatgaaagtgca 40005802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 102
Target Start/End: Complemental strand, 45848433 - 45848387
Alignment:
Q  56 ccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    ||||||||||||||||||||||||||| ||| ||||| |||||||||    
T  45848433 ccaatgccaaaatctgatgaaagtgcaagaactaaaaccatatttaa 45848387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 322005 - 322038
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  322005 agggaccaatgccaaaatctgatgaaagtgcagg 322038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 13199027 - 13198994
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  13199027 agggaccaatgccaaaatctgatgaaagtgcagg 13198994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 15168967 - 15168934
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  15168967 agggaccaatgccaaaatctgatgaaagtgcagg 15168934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 112
Target Start/End: Original strand, 15169296 - 15169393
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagcctacttta 112  Q
    |||||||||||| |||||||||||         |||||||||||| |||||||||||||||||||||  | | |||| |||||||||| |||| ||||    
T  15169296 aaagtgcagggaccaattccaaacaaaaaaaaatgtagggaccaacgccaaaatctgatgaaagtgccaggactaaagacatatttaaacctaattta 15169393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 23205753 - 23205720
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  23205753 agggaccaatgccaaaatctgatgaaagtgcagg 23205720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 32384149 - 32384116
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  32384149 agggaccaatgccaaaatctgatgaaagtgcagg 32384116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 40147405 - 40147372
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  40147405 agggaccaatgccaaaatctgatgaaagtgcagg 40147372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 42496288 - 42496321
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  42496288 agggaccaatgccaaaatctgatgaaagtgcagg 42496321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 46008981 - 46009014
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  46008981 agggaccaatgccaaaatctgatgaaagtgcagg 46009014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 51716177 - 51716124
Alignment:
Q  49 gtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    |||||||||||||||||||| ||||||||||||| | | |||| ||||||||||    
T  51716177 gtagggaccaatgccaaaatttgatgaaagtgcaaggactaaagacatatttaa 51716124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 84
Target Start/End: Original strand, 51716479 - 51716516
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    |||||||||||||||||||||||| |||||||||||||    
T  51716479 gtgtagggaccaatgccaaaatctaatgaaagtgcagg 51716516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 51892717 - 51892684
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  51892717 agggaccaatgccaaaatctgatgaaagtgcagg 51892684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 1922552 - 1922492
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    ||||||| |||||||||||||||||||||||||||| | | ||||  ||||||||| ||||    
T  1922552 gtgtaggaaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaaccta 1922492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 23206018 - 23206078
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    |||||||||| ||||||||||||||||||||||| | | | |||| |||||||||| ||||    
T  23206018 gtgtagggactaatgccaaaatctgatgaaagtgaaaggactaaagacatatttaaaccta 23206078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 83
Target Start/End: Original strand, 31317586 - 31317618
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcag 83  Q
    |||||||||||||||||||||||||||||||||    
T  31317586 agggaccaatgccaaaatctgatgaaagtgcag 31317618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 83
Target Start/End: Original strand, 41965498 - 41965530
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcag 83  Q
    |||||||||||||||||||||||||||||||||    
T  41965498 agggaccaatgccaaaatctgatgaaagtgcag 41965530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 82
Target Start/End: Original strand, 40147625 - 40147656
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgca 82  Q
    ||||||||||||||||||||||||||||||||    
T  40147625 agggaccaatgccaaaatctgatgaaagtgca 40147656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 84
Target Start/End: Complemental strand, 919229 - 919199
Alignment:
Q  54 gaccaatgccaaaatctgatgaaagtgcagg 84  Q
    |||||||||||||||||||||||||||||||    
T  919229 gaccaatgccaaaatctgatgaaagtgcagg 919199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 84
Target Start/End: Complemental strand, 10616513 - 10616483
Alignment:
Q  54 gaccaatgccaaaatctgatgaaagtgcagg 84  Q
    |||||||||||||||||||||||||||||||    
T  10616513 gaccaatgccaaaatctgatgaaagtgcagg 10616483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 84
Target Start/End: Complemental strand, 32328112 - 32328082
Alignment:
Q  54 gaccaatgccaaaatctgatgaaagtgcagg 84  Q
    |||||||||||||||||||||||||||||||    
T  32328112 gaccaatgccaaaatctgatgaaagtgcagg 32328082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 85
Target Start/End: Complemental strand, 42207920 - 42207886
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagga 85  Q
    |||||| ||||||||||||||||||||||||||||    
T  42207920 agggactaatgccaaaatctgatgaaagtgcagga 42207886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 81
Target Start/End: Original strand, 45848631 - 45848661
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgc 81  Q
    |||||||||||||||||||||||||||||||    
T  45848631 agggaccaatgccaaaatctgatgaaagtgc 45848661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 8445016 - 8445049
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||| ||||||||||    
T  8445016 agggaccaatgccaaaatctgataaaagtgcagg 8445049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 84
Target Start/End: Complemental strand, 28693011 - 28692974
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    |||||||||||||||| ||||| |||||||||||||||    
T  28693011 gtgtagggaccaatgctaaaatatgatgaaagtgcagg 28692974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 35378018 - 35378051
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||| ||||||    
T  35378018 agggaccaatgccaaaatctgatgaaattgcagg 35378051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 84
Target Start/End: Original strand, 39210611 - 39210648
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||| |||||||||||||| |||||||||||||||    
T  39210611 gtgtaggtaccaatgccaaaatttgatgaaagtgcagg 39210648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 40005470 - 40005437
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||| ||||||||||||||||||||||    
T  40005470 agggaccaatgtcaaaatctgatgaaagtgcagg 40005437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 49263928 - 49263895
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    |||||||||||||||||||| |||||||||||||    
T  49263928 agggaccaatgccaaaatctaatgaaagtgcagg 49263895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 53940703 - 53940736
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||| ||||||||||    
T  53940703 agggaccaatgccaaaatctgataaaagtgcagg 53940736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 11021357 - 11021309
Alignment:
Q  54 gaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    ||||||||||||||| |||||||| |||||||| ||||  |||||||||    
T  11021357 gaccaatgccaaaatttgatgaaaatgcaggaaataaaggcatatttaa 11021309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 105
Target Start/End: Complemental strand, 49148219 - 49148167
Alignment:
Q  53 ggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagcc 105  Q
    |||||||||||||||| || |||||||||||| | |||  |||||||||||||    
T  49148219 ggaccaatgccaaaatatggtgaaagtgcagggactaatgacatatttaagcc 49148167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 6e-21; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 15 - 106
Target Start/End: Original strand, 6390236 - 6390327
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagcct 106  Q
    |||||||||||| |||||||||||        |||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||    
T  6390236 aaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcagggactaaagacatatttaagcct 6390327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 5997548 - 5997608
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    |||||||||||||||||||||||||||||||||||||| | ||||  ||||||||||||||    
T  5997548 gtgtagggaccaatgccaaaatctgatgaaagtgcagggactaaaggcatatttaagccta 5997608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 21002858 - 21002771
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    |||||||| |||||||||||||||        |||||||||||||||||||||||||||||||||||| | | |||| ||||||||||    
T  21002858 aaagtgcatggatcaattccaaacaaaaaaatgtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaa 21002771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 33705891 - 33705804
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    |||||||||||| |||||||||||        |||||||||||||||||||||||||||||||||||| | | |||| ||||||||||    
T  33705891 aaagtgcagggaacaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaa 33705804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 102
Target Start/End: Complemental strand, 6535464 - 6535410
Alignment:
Q  48 tgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    ||||||||||||||||||||||||||||||||||| | | |||| ||||||||||    
T  6535464 tgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaa 6535410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 84
Target Start/End: Complemental strand, 3199365 - 3199328
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||||||    
T  3199365 gtgtagggaccaatgccaaaatctgatgaaagtgcagg 3199328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 12396019 - 12396079
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    ||||||||||||||||||||||||||| |||||||| | | |||| |||||||||| ||||    
T  12396019 gtgtagggaccaatgccaaaatctgattaaagtgcaaggactaaagacatatttaaaccta 12396079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 14630871 - 14630811
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    |||||||||||||||||||||||||||||||||||| | | ||||  ||||||||| ||||    
T  14630871 gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaaccta 14630811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 605797 - 605852
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    ||||||||| |||||||||||||||||||||||||| | | |||| ||||||||||    
T  605797 gtgtagggatcaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaa 605852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 102
Target Start/End: Complemental strand, 5146876 - 5146821
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    |||||||||||||||||||||||| ||||||||||| | | |||| ||||||||||    
T  5146876 gtgtagggaccaatgccaaaatctaatgaaagtgcaaggactaaagacatatttaa 5146821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 9566399 - 9566454
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    ||||||||||||||| |||||||||||||||||||| | | |||| ||||||||||    
T  9566399 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaggactaaagacatatttaa 9566454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 10143536 - 10143623
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    |||||||||||| |||||||||||        ||||||||||||||| |||||||||||||||||| | | | ||||| |||||||||    
T  10143536 aaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgacaaaatctgatgaaagtgtaaggactaaaagcatatttaa 10143623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 86
Target Start/End: Original strand, 14444928 - 14444967
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaa 86  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  14444928 gtgtagggaccaataccaaaatctgatgaaagtgcaggaa 14444967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 16408828 - 16408761
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgca 82  Q
    |||||||||||| |||||||||||        |||||||||||||||||||||| |||||||||||||    
T  16408828 aaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatatgatgaaagtgca 16408761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 106
Target Start/End: Original strand, 17204217 - 17204276
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagcct 106  Q
    |||||||||| ||||| ||||||||||||||||||||| | |||| | ||||||||||||    
T  17204217 gtgtagggacgaatgctaaaatctgatgaaagtgcagggactaaagatatatttaagcct 17204276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 82
Target Start/End: Complemental strand, 32218900 - 32218865
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgca 82  Q
    ||||||||||||||||||||||||||||||||||||    
T  32218900 gtgtagggaccaatgccaaaatctgatgaaagtgca 32218865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 107
Target Start/End: Original strand, 33243527 - 33243586
Alignment:
Q  48 tgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    ||||||||||||||||||||||||||||||||||| | | ||||  ||||||||| ||||    
T  33243527 tgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaacccta 33243586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 6535739 - 6535772
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  6535739 agggaccaatgccaaaatctgatgaaagtgcagg 6535772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 9566050 - 9566017
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  9566050 agggaccaatgccaaaatctgatgaaagtgcagg 9566017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 10143265 - 10143232
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  10143265 agggaccaatgccaaaatctgatgaaagtgcagg 10143232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 112
Target Start/End: Original strand, 16409100 - 16409161
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagcctacttta 112  Q
    ||||||||||| ||||||||||||||||||||||||| ||  ||| |||||| || ||||||    
T  16409100 agggaccaatgtcaaaatctgatgaaagtgcaggaatcaatgacacatttaaaccaacttta 16409161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 33360501 - 33360468
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  33360501 agggaccaatgccaaaatctgatgaaagtgcagg 33360468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 80
Target Start/End: Complemental strand, 33877847 - 33877814
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtg 80  Q
    ||||||||||||||||||||||||||||||||||    
T  33877847 gtgtagggaccaatgccaaaatctgatgaaagtg 33877814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 83
Target Start/End: Complemental strand, 1827110 - 1827078
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcag 83  Q
    |||||||||||||||||||||||||||||||||    
T  1827110 agggaccaatgccaaaatctgatgaaagtgcag 1827078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 82
Target Start/End: Complemental strand, 583714 - 583683
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgca 82  Q
    ||||||||||||||||||||||||||||||||    
T  583714 agggaccaatgccaaaatctgatgaaagtgca 583683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 82
Target Start/End: Original strand, 32219205 - 32219236
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgca 82  Q
    ||||||||||||||||||||||||||||||||    
T  32219205 agggaccaatgccaaaatctgatgaaagtgca 32219236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 82
Target Start/End: Original strand, 33360805 - 33360840
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgca 82  Q
    ||||||||||||||| ||||||||||||||||||||    
T  33360805 gtgtagggaccaatgtcaaaatctgatgaaagtgca 33360840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 102
Target Start/End: Original strand, 3199548 - 3199602
Alignment:
Q  48 tgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    |||||||||||||||||||||||||| |||||| | | | |||| ||||||||||    
T  3199548 tgtagggaccaatgccaaaatctgataaaagtgtaaggactaaagacatatttaa 3199602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 102
Target Start/End: Complemental strand, 21904922 - 21904868
Alignment:
Q  48 tgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    ||||||||| ||| ||||||||||||||||||||| | | |||| ||||||||||    
T  21904922 tgtagggactaataccaaaatctgatgaaagtgcaaggactaaagacatatttaa 21904868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 2793088 - 2793055
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    |||||||||||||||||| |||||||||||||||    
T  2793088 agggaccaatgccaaaatatgatgaaagtgcagg 2793055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 5997247 - 5997214
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    |||||||||||||||||| |||||||||||||||    
T  5997247 agggaccaatgccaaaatttgatgaaagtgcagg 5997214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 84
Target Start/End: Original strand, 16120574 - 16120603
Alignment:
Q  55 accaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||    
T  16120574 accaatgccaaaatctgatgaaagtgcagg 16120603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 17203919 - 17203886
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    |||||||||| |||||||||||||||||||||||    
T  17203919 agggaccaataccaaaatctgatgaaagtgcagg 17203886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 21905418 - 21905451
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||| ||||||||||||||||||||||    
T  21905418 agggaccaatggcaaaatctgatgaaagtgcagg 21905451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 22695609 - 22695576
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||| ||||||||||||||||||||||    
T  22695609 agggaccaatgtcaaaatctgatgaaagtgcagg 22695576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 33243223 - 33243190
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||| ||||||    
T  33243223 agggaccaatgccaaaatctgatgaaaatgcagg 33243190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 4e-19; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 107
Target Start/End: Original strand, 14556336 - 14556428
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    ||||||||||||||||||||||||        |||||||||| ||||||||||||||||||||||||||| | |||| | |||||||||||||    
T  14556336 aaagtgcagggatcaattccaaacaaaaaaaagtgtagggacaaatgccaaaatctgatgaaagtgcagggactaaagatatatttaagccta 14556428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 116
Target Start/End: Complemental strand, 5132516 - 5132415
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagcctactttatt 114  Q
    |||||||||||| |||||||||||        |||||||||||||||||||||||||||||||||||| | | |||| |||||||||| |||| ||| ||    
T  5132516 aaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaacctattttctt 5132417  T
Q  115 tt 116  Q
    ||    
T  5132416 tt 5132415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 107
Target Start/End: Complemental strand, 28486710 - 28486618
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    |||||||||||| |||||||||||        |||||||||||||||||||||||||||||||||||| | | |||| |||||||||| ||||    
T  28486710 aaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaaccta 28486618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 5905088 - 5905143
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    |||||||||||||||||||||||||||||||||||| | | |||||||||||||||    
T  5905088 gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaaacatatttaa 5905143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 6782656 - 6782589
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgca 82  Q
    ||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  6782656 aaagtgcagggatcaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgca 6782589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 107
Target Start/End: Complemental strand, 38872600 - 38872508
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    |||||||||||| |||||||||||        |||||||||||||||||||||||||||||||||||| | | ||||  ||||||||| ||||    
T  38872600 aaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagtcatatttaaaccta 38872508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 44396397 - 44396457
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    |||||||||||||||||||||||||||||||||||| | | |||| |||||||||| ||||    
T  44396397 gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaaccta 44396457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 44519694 - 44519754
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    |||||||||||||| ||||||||||||||||||||| | |||||| |||||||||| ||||    
T  44519694 gtgtagggaccaataccaaaatctgatgaaagtgcaaggattaaagacatatttaaaccta 44519754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 1342756 - 1342843
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    |||||||||||| |||||||||||        |||||||||||||||||||||||||||||||||| | | | |||| ||||||||||    
T  1342756 aaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgtaaggactaaagacatatttaa 1342843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 2937132 - 2937187
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    |||||||||||||||||||||||||||||||||||| | | |||| ||||||||||    
T  2937132 gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaa 2937187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 47 - 106
Target Start/End: Original strand, 29721441 - 29721500
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagcct 106  Q
    ||||||| |||||||||||||||||||||||||||||| | || | ||||||||||||||    
T  29721441 gtgtaggaaccaatgccaaaatctgatgaaagtgcagggactagagacatatttaagcct 29721500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 32487217 - 32487272
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    |||||||||||||||||||||||||||||||||||||| | ||||  |||||||||    
T  32487217 gtgtagggaccaatgccaaaatctgatgaaagtgcagggactaaaggcatatttaa 32487272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 37351030 - 37350943
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    |||||||||||| |||||||||||         ||||||||||||||||||||||||||||||||||| | ||||||  |||||||||    
T  37351030 aaagtgcagggaccaattccaaacaaaaaaaaatgtagggaccaatgccaaaatctgatgaaagtgcaaggattaaaggcatatttaa 37350943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 40125138 - 40125193
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    |||||||||||||||||||||||||||||||||||||| | ||||  |||||||||    
T  40125138 gtgtagggaccaatgccaaaatctgatgaaagtgcagggactaaaggcatatttaa 40125193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 106
Target Start/End: Original strand, 36302784 - 36302842
Alignment:
Q  48 tgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagcct 106  Q
    |||||| |||||||||||||||||||||||||||||| | ||||  |||||||||||||    
T  36302784 tgtaggaaccaatgccaaaatctgatgaaagtgcagggactaaaggcatatttaagcct 36302842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 1342522 - 1342453
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||| ||||||        ||| ||||||||||||||||||||||||||||||||||    
T  1342522 aaagtgcagggatcaatgccaaacaaaaaaaagtgcagggaccaatgccaaaatctgatgaaagtgcagg 1342453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 1366360 - 1366300
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    |||||||||||||||||||||||||||||||||||| | | ||||  ||||||||| ||||    
T  1366360 gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaaccta 1366300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 28838159 - 28838099
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    |||||||||||||||||||||||||||||||||||| | | |||| | |||||||| ||||    
T  28838159 gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagagatatttaaaccta 28838099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 83
Target Start/End: Complemental strand, 30056985 - 30056949
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcag 83  Q
    |||||||||||||||||||||||||||||||||||||    
T  30056985 gtgtagggaccaatgccaaaatctgatgaaagtgcag 30056949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 47648212 - 47648272
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    |||||||||||||||||||||||||||||||||||| | | ||||  ||||||||| ||||    
T  47648212 gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaaccta 47648272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 2731063 - 2731118
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    |||||||||||||| ||||||||||||||||||||| | | |||| ||||||||||    
T  2731063 gtgtagggaccaataccaaaatctgatgaaagtgcaaggactaaagacatatttaa 2731118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 23253649 - 23253716
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgca 82  Q
    |||||||||||| |||||||||||         |||||||||||||||||||||||||||||||||||    
T  23253649 aaagtgcagggaccaattccaaacaaaaaaaattgtagggaccaatgccaaaatctgatgaaagtgca 23253716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 36466259 - 36466326
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgca 82  Q
    ||||| ||||||||||||||||||         |||||||||||||||||||||||||||||||||||    
T  36466259 aaagtacagggatcaattccaaacaaaaaaaaatgtagggaccaatgccaaaatctgatgaaagtgca 36466326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 38019320 - 38019375
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    ||||||||||||||| |||||||||||||||||||| | | |||| ||||||||||    
T  38019320 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaggactaaagacatatttaa 38019375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 45951228 - 45951295
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgca 82  Q
    |||||||||||| |||||||||||        ||||||| ||||||||||||||||||||||||||||    
T  45951228 aaagtgcagggaccaattccaaacaaaaaaaagtgtaggaaccaatgccaaaatctgatgaaagtgca 45951295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 47672267 - 47672334
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgca 82  Q
    |||||||||||| |||||||||||        |||||||||||||| |||||||||||||||||||||    
T  47672267 aaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaataccaaaatctgatgaaagtgca 47672334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 50755983 - 50756050
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgca 82  Q
    |||||||||||| |||||||||||         |||||||||||||||||||||||||||||||||||    
T  50755983 aaagtgcagggaccaattccaaacaaaaaaaattgtagggaccaatgccaaaatctgatgaaagtgca 50756050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 1366632 - 1366665
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  1366632 agggaccaatgccaaaatctgatgaaagtgcagg 1366665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 2931015 - 2930982
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  2931015 agggaccaatgccaaaatctgatgaaagtgcagg 2930982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 32486913 - 32486880
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  32486913 agggaccaatgccaaaatctgatgaaagtgcagg 32486880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 39524323 - 39524290
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  39524323 agggaccaatgccaaaatctgatgaaagtgcagg 39524290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 45950957 - 45950924
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  45950957 agggaccaatgccaaaatctgatgaaagtgcagg 45950924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 82
Target Start/End: Complemental strand, 29548636 - 29548604
Alignment:
Q  50 tagggaccaatgccaaaatctgatgaaagtgca 82  Q
    |||||||||||||||||||||||||||||||||    
T  29548636 tagggaccaatgccaaaatctgatgaaagtgca 29548604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 49628447 - 49628507
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    |||||||||||||||||||||||| ||||||||||| | | |||| | |||||||| ||||    
T  49628447 gtgtagggaccaatgccaaaatctaatgaaagtgcaaggactaaagagatatttaaaccta 49628507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 105
Target Start/End: Original strand, 4487039 - 4487094
Alignment:
Q  50 tagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagcc 105  Q
    ||||||||||||  ||||||||||||||||||| | | |||| |||||||||||||    
T  4487039 tagggaccaatgtaaaaatctgatgaaagtgcaaggagtaaagacatatttaagcc 4487094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 82
Target Start/End: Original strand, 6782920 - 6782951
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgca 82  Q
    ||||||||||||||||||||||||||||||||    
T  6782920 agggaccaatgccaaaatctgatgaaagtgca 6782951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 82
Target Start/End: Original strand, 17077684 - 17077719
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgca 82  Q
    ||||||||||||||| ||||||||||||||||||||    
T  17077684 gtgtagggaccaatgtcaaaatctgatgaaagtgca 17077719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 82
Target Start/End: Complemental strand, 25378742 - 25378711
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgca 82  Q
    ||||||||||||||||||||||||||||||||    
T  25378742 agggaccaatgccaaaatctgatgaaagtgca 25378711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 82
Target Start/End: Original strand, 30057287 - 30057318
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgca 82  Q
    ||||||||||||||||||||||||||||||||    
T  30057287 agggaccaatgccaaaatctgatgaaagtgca 30057318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 84
Target Start/End: Original strand, 37351294 - 37351325
Alignment:
Q  53 ggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||    
T  37351294 ggaccaatgccaaaatctgatgaaagtgcagg 37351325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 84
Target Start/End: Original strand, 38717691 - 38717722
Alignment:
Q  53 ggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||    
T  38717691 ggaccaatgccaaaatctgatgaaagtgcagg 38717722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 86
Target Start/End: Original strand, 39950557 - 39950592
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcaggaa 86  Q
    ||||| ||||||||||||||||||||||||||||||    
T  39950557 agggatcaatgccaaaatctgatgaaagtgcaggaa 39950592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 52346283 - 52346232
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    |||||||||||||||||||||||||||||||| | |  || |||||||||||    
T  52346283 agggaccaatgccaaaatctgatgaaagtgcatggaccaataacatatttaa 52346232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 84
Target Start/End: Original strand, 25378969 - 25378999
Alignment:
Q  54 gaccaatgccaaaatctgatgaaagtgcagg 84  Q
    |||||||||||||||||||||||||||||||    
T  25378969 gaccaatgccaaaatctgatgaaagtgcagg 25378999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 84
Target Start/End: Original strand, 28838465 - 28838495
Alignment:
Q  54 gaccaatgccaaaatctgatgaaagtgcagg 84  Q
    |||||||||||||||||||||||||||||||    
T  28838465 gaccaatgccaaaatctgatgaaagtgcagg 28838495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 84
Target Start/End: Complemental strand, 47647909 - 47647879
Alignment:
Q  54 gaccaatgccaaaatctgatgaaagtgcagg 84  Q
    |||||||||||||||||||||||||||||||    
T  47647909 gaccaatgccaaaatctgatgaaagtgcagg 47647879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 2730791 - 2730758
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||| ||||||||||    
T  2730791 agggaccaatgccaaaatctgataaaagtgcagg 2730758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 5132690 - 5132723
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||| ||||||||||||||||||||||    
T  5132690 agggaccaatgtcaaaatctgatgaaagtgcagg 5132723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 28486980 - 28487013
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||| ||||||||||||||||||    
T  28486980 agggaccaatgccaatatctgatgaaagtgcagg 28487013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 84
Target Start/End: Original strand, 32005713 - 32005742
Alignment:
Q  55 accaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||    
T  32005713 accaatgccaaaatctgatgaaagtgcagg 32005742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 82
Target Start/End: Complemental strand, 36302480 - 36302451
Alignment:
Q  53 ggaccaatgccaaaatctgatgaaagtgca 82  Q
    ||||||||||||||||||||||||||||||    
T  36302480 ggaccaatgccaaaatctgatgaaagtgca 36302451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 38872868 - 38872901
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||| ||||||||||||||||||||||    
T  38872868 agggaccaatgtcaaaatctgatgaaagtgcagg 38872901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 80
Target Start/End: Complemental strand, 39759005 - 39758976
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtg 80  Q
    ||||||||||||||||||||||||||||||    
T  39759005 agggaccaatgccaaaatctgatgaaagtg 39758976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 80
Target Start/End: Complemental strand, 39764359 - 39764330
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtg 80  Q
    ||||||||||||||||||||||||||||||    
T  39764359 agggaccaatgccaaaatctgatgaaagtg 39764330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 80
Target Start/End: Complemental strand, 39950290 - 39950257
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtg 80  Q
    |||||||||||||| |||||||||||||||||||    
T  39950290 gtgtagggaccaataccaaaatctgatgaaagtg 39950257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 47672054 - 47672021
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||| ||||||||||||||||||||    
T  47672054 agggaccaatgcctaaatctgatgaaagtgcagg 47672021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 49628181 - 49628148
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    |||||| |||||||||||||||||||||||||||    
T  49628181 agggactaatgccaaaatctgatgaaagtgcagg 49628148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 80
Target Start/End: Complemental strand, 50755711 - 50755682
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtg 80  Q
    ||||||||||||||||||||||||||||||    
T  50755711 agggaccaatgccaaaatctgatgaaagtg 50755682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 79
Target Start/End: Original strand, 7838963 - 7838995
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagt 79  Q
    |||||| ||||||||||||||||||||||||||    
T  7838963 gtgtagagaccaatgccaaaatctgatgaaagt 7838995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 79
Target Start/End: Complemental strand, 23253379 - 23253351
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagt 79  Q
    |||||||||||||||||||||||||||||    
T  23253379 agggaccaatgccaaaatctgatgaaagt 23253351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 79
Target Start/End: Complemental strand, 38717384 - 38717352
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagt 79  Q
    |||||||||||||||| ||||||||||||||||    
T  38717384 gtgtagggaccaatgctaaaatctgatgaaagt 38717352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 83
Target Start/End: Complemental strand, 44519394 - 44519362
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcag 83  Q
    ||||||||||||||||||||||||||| |||||    
T  44519394 agggaccaatgccaaaatctgatgaaaatgcag 44519362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 47 - 106
Target Start/End: Original strand, 50071 - 50130
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagcct 106  Q
    |||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||    
T  50071 gtgtagggaccaatgccaaaatctgatgaaagtgcagggactaaagacatatttaagcct 50130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 49771 - 49738
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    |||||||||| |||||||||||||||||||||||    
T  49771 agggaccaataccaaaatctgatgaaagtgcagg 49738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 6e-18; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 105
Target Start/End: Original strand, 9855662 - 9855720
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagcc 105  Q
    |||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||    
T  9855662 gtgtagggaccaatgccaaaatctgatgaaagtgcagggactaaagacatatttaagcc 9855720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 10496013 - 10496100
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    |||||||||||| |||||||||||        |||||||||||||||||||||||||||||||||||| | | |||| ||||||||||    
T  10496013 aaagtgcagggaacaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaa 10496100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 107
Target Start/End: Original strand, 43857778 - 43857870
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    |||||||||||| |||||||||||        |||||||||||||||||||||||||||||||||||| | | ||||  ||||||||| ||||    
T  43857778 aaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaatgcatatttaaaccta 43857870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 47 - 102
Target Start/End: Complemental strand, 4528699 - 4528644
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    |||||||||||||||||||||||||||||||||||| | | |||| ||||||||||    
T  4528699 gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaa 4528644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 27696990 - 27697077
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    |||||||||||| |||||||||||        ||||||||||||||||||||||||||||||| |||| | | |||| ||||||||||    
T  27696990 aaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaaatgcaaggactaaagacatatttaa 27697077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 32924047 - 32924104
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagc 104  Q
    ||||||||||||||| |||||||||||||||||||||| | ||||  |||||||||||    
T  32924047 gtgtagggaccaatgtcaaaatctgatgaaagtgcagggactaaaggcatatttaagc 32924104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 7050527 - 7050467
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    |||||||||||||||||||||||||||||||||||| | | ||||  ||||||||| ||||    
T  7050527 gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaaccta 7050467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 10837524 - 10837579
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    ||||||||||||||||||||||||||| |||||||| | | |||| ||||||||||    
T  10837524 gtgtagggaccaatgccaaaatctgataaaagtgcaaggactaaagacatatttaa 10837579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 17696956 - 17697011
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    ||||| |||||||||||||||||||||||||||||| | | |||| ||||||||||    
T  17696956 gtgtatggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaa 17697011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 106
Target Start/End: Complemental strand, 26695466 - 26695407
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagcct 106  Q
    |||||||||||||||||||||| ||||||||||| | | | |||| ||||||||||||||    
T  26695466 gtgtagggaccaatgccaaaatatgatgaaagtggatggactaaagacatatttaagcct 26695407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 102
Target Start/End: Complemental strand, 37405931 - 37405876
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    |||||||||||||||||||||||||||||||||| | ||| ||||  |||||||||    
T  37405931 gtgtagggaccaatgccaaaatctgatgaaagtgtaagaactaaaggcatatttaa 37405876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 34181244 - 34181178
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgc 81  Q
    |||||||||||| |||||||||||        ||||||||||||||| |||||||||||||||||||    
T  34181244 aaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgtcaaaatctgatgaaagtgc 34181178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 105
Target Start/End: Complemental strand, 42686081 - 42686023
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagcc 105  Q
    ||||||||||||||| |||||||||||||||||||||  | |||  |||||||||||||    
T  42686081 gtgtagggaccaatgtcaaaatctgatgaaagtgcagagactaatgacatatttaagcc 42686023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 2705498 - 2705531
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  2705498 agggaccaatgccaaaatctgatgaaagtgcagg 2705531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 7050884 - 7050917
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  7050884 agggaccaatgccaaaatctgatgaaagtgcagg 7050917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 10837220 - 10837187
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  10837220 agggaccaatgccaaaatctgatgaaagtgcagg 10837187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 27696750 - 27696717
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  27696750 agggaccaatgccaaaatctgatgaaagtgcagg 27696717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 30794861 - 30794828
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  30794861 agggaccaatgccaaaatctgatgaaagtgcagg 30794828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 34181491 - 34181524
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  34181491 agggaccaatgccaaaatctgatgaaagtgcagg 34181524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 41441468 - 41441435
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  41441468 agggaccaatgccaaaatctgatgaaagtgcagg 41441435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 2705218 - 2705166
Alignment:
Q  50 tagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    ||||||||||| ||||||||||||||||||||| | | |||| ||||||||||    
T  2705218 tagggaccaataccaaaatctgatgaaagtgcaaggactaaagacatatttaa 2705166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 103
Target Start/End: Complemental strand, 7230026 - 7229970
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaag 103  Q
    ||||||||| |||| |||||||||||| |||||||||| | |||| |||||||||||    
T  7230026 gtgtagggatcaataccaaaatctgataaaagtgcagggactaaagacatatttaag 7229970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 82
Target Start/End: Original strand, 2057079 - 2057114
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgca 82  Q
    ||||||||||||||||||||||||||||||| ||||    
T  2057079 gtgtagggaccaatgccaaaatctgatgaaaatgca 2057114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 2232977 - 2233032
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    ||||||||||||||||||||| || ||||||||||| | | |||| ||||||||||    
T  2232977 gtgtagggaccaatgccaaaagctaatgaaagtgcaaggactaaagacatatttaa 2233032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 10495776 - 10495725
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    ||||||||||| |||||||||||||||||||||| || ||  ||||||||||    
T  10495776 agggaccaatgtcaaaatctgatgaaagtgcagggatcaatgacatatttaa 10495725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 30795133 - 30795188
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    ||||||||  |||||||||||||||||||||||||| | | |||| ||||||||||    
T  30795133 gtgtaggggtcaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaa 30795188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 102
Target Start/End: Complemental strand, 42216313 - 42216258
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    ||||||| |||||||||||||| |||| |||||||| | |||||| ||||||||||    
T  42216313 gtgtaggaaccaatgccaaaatatgataaaagtgcaaggattaaagacatatttaa 42216258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 84
Target Start/End: Complemental strand, 32923775 - 32923745
Alignment:
Q  54 gaccaatgccaaaatctgatgaaagtgcagg 84  Q
    |||||||||||||||||||||||||||||||    
T  32923775 gaccaatgccaaaatctgatgaaagtgcagg 32923745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 84
Target Start/End: Complemental strand, 2056770 - 2056741
Alignment:
Q  55 accaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||    
T  2056770 accaatgccaaaatctgatgaaagtgcagg 2056741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 2232786 - 2232753
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||| ||||||||||||||||||||||    
T  2232786 agggaccaatgtcaaaatctgatgaaagtgcagg 2232753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 4528975 - 4529008
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||| ||||||||||||||||||||||    
T  4528975 agggaccaatgtcaaaatctgatgaaagtgcagg 4529008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 9855361 - 9855328
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||| ||||    
T  9855361 agggaccaatgccaaaatctgatgaaagtacagg 9855328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 17696664 - 17696631
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||| ||||||||||||||||||||||    
T  17696664 agggaccaatgtcaaaatctgatgaaagtgcagg 17696631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 26695765 - 26695798
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    |||||||||| |||||||||||||||||||||||    
T  26695765 agggaccaataccaaaatctgatgaaagtgcagg 26695798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 42216615 - 42216648
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||| ||||||||||||||    
T  42216615 agggaccaatgccaaaatccgatgaaagtgcagg 42216648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 6e-18; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 48 - 106
Target Start/End: Complemental strand, 19987892 - 19987834
Alignment:
Q  48 tgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagcct 106  Q
    ||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||    
T  19987892 tgtagggaccaatgccaaaatctgatgaaagtgcagggactaaagacatatttaagcct 19987834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 107
Target Start/End: Complemental strand, 21441058 - 21440966
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    |||||||||||| |||||||||||        ||||||||| |||||||||||||||||||||||||| | |||||| |||||||||| ||||    
T  21441058 aaagtgcagggaccaattccaaacaaaaaaaagtgtagggatcaatgccaaaatctgatgaaagtgcaaggattaaagacatatttaaaccta 21440966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 111
Target Start/End: Original strand, 49665651 - 49665715
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagcctacttt 111  Q
    |||||||| ||||||||||||||||||||||||||| | | |||| |||||||||| ||||||||    
T  49665651 gtgtaggggccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaacctacttt 49665715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 47 - 106
Target Start/End: Complemental strand, 16222533 - 16222474
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagcct 106  Q
    |||||||||||||||||||||| ||||||||||||||| | ||||  |||||||||||||    
T  16222533 gtgtagggaccaatgccaaaatttgatgaaagtgcagggactaaaggcatatttaagcct 16222474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 48 - 111
Target Start/End: Complemental strand, 40790866 - 40790803
Alignment:
Q  48 tgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagcctacttt 111  Q
    ||||||||||||||||||||||||||||||||||| | | |||| |||||||||| ||| ||||    
T  40790866 tgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaaccttcttt 40790803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 44398015 - 44397948
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgca 82  Q
    |||||||||||| |||||||||||        ||||||||||||||||||||||||||||||||||||    
T  44398015 aaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgca 44397948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 47358479 - 47358546
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgca 82  Q
    |||||||||||| |||||||||||        ||||||||||||||||||||||||||||||||||||    
T  47358479 aaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgca 47358546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 35565426 - 35565486
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    ||||| |||||||||||||||||||||||||||||| | | |||| |||||||||| ||||    
T  35565426 gtgtatggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaaccta 35565486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 107
Target Start/End: Complemental strand, 40036736 - 40036644
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    |||||||||||| |||||||||||        ||||||||||||||  |||||||| ||||||||||| | | |||| |||||||||||||||    
T  40036736 aaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatatcaaaatctaatgaaagtgcaaggactaaagacatatttaagccta 40036644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 84
Target Start/End: Original strand, 44638620 - 44638656
Alignment:
Q  48 tgtagggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    |||||||||||||||||||||||||||||||||||||    
T  44638620 tgtagggaccaatgccaaaatctgatgaaagtgcagg 44638656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 82
Target Start/End: Original strand, 21561155 - 21561190
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgca 82  Q
    ||||||||||||||||||||||||||||||||||||    
T  21561155 gtgtagggaccaatgccaaaatctgatgaaagtgca 21561190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 23461031 - 23460964
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgca 82  Q
    |||||||||||| |||||||||||        ||||||||||||||||||||||||||| ||||||||    
T  23461031 aaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgataaaagtgca 23460964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 29352677 - 29352732
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    ||||||||| |||||||||||||||||||||||||| | | |||| ||||||||||    
T  29352677 gtgtagggatcaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaa 29352732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 102
Target Start/End: Complemental strand, 33092092 - 33092037
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    ||||||||||||||||||||| |||||||||||||| | | |||| ||||||||||    
T  33092092 gtgtagggaccaatgccaaaaactgatgaaagtgcaaggactaaagacatatttaa 33092037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 51437322 - 51437377
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    ||||||| |||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  51437322 gtgtaggaaccaatgccaaaatccaatgaaagtgcaagaattaaagacatatttaa 51437377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 82
Target Start/End: Complemental strand, 16731976 - 16731942
Alignment:
Q  48 tgtagggaccaatgccaaaatctgatgaaagtgca 82  Q
    |||||||||||||||||||||||||||||||||||    
T  16731976 tgtagggaccaatgccaaaatctgatgaaagtgca 16731942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 82
Target Start/End: Original strand, 27957817 - 27957851
Alignment:
Q  48 tgtagggaccaatgccaaaatctgatgaaagtgca 82  Q
    |||||||||||||||||||||||||||||||||||    
T  27957817 tgtagggaccaatgccaaaatctgatgaaagtgca 27957851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 21441297 - 21441330
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  21441297 agggaccaatgccaaaatctgatgaaagtgcagg 21441330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 107
Target Start/End: Original strand, 27940733 - 27940786
Alignment:
Q  54 gaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    ||||||||| |||||||| ||||||||||||||||||   ||||||||||||||    
T  27940733 gaccaatgctaaaatctggtgaaagtgcaggaattaatgtcatatttaagccta 27940786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 27957514 - 27957481
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  27957514 agggaccaatgccaaaatctgatgaaagtgcagg 27957481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 47358204 - 47358171
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  47358204 agggaccaatgccaaaatctgatgaaagtgcagg 47358171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 51754256 - 51754289
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  51754256 agggaccaatgccaaaatctgatgaaagtgcagg 51754289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 102
Target Start/End: Complemental strand, 3017310 - 3017254
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgat-gaaagtgcaggaattaaaaacatatttaa 102  Q
    ||||||||||||||||||||||||||| ||||||||| | | |||| ||||||||||    
T  3017310 gtgtagggaccaatgccaaaatctgatcgaaagtgcaaggactaaagacatatttaa 3017254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 83
Target Start/End: Complemental strand, 29352458 - 29352426
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcag 83  Q
    |||||||||||||||||||||||||||||||||    
T  29352458 agggaccaatgccaaaatctgatgaaagtgcag 29352426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 47982683 - 47982743
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    |||||||||||||||||||||| ||||||||||||| | | ||||  ||||||||| ||||    
T  47982683 gtgtagggaccaatgccaaaatatgatgaaagtgcaaggactaaaggcatatttaaaccta 47982743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 47991970 - 47992030
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    |||||||||||||||||||||| ||||||||||||| | | ||||  ||||||||| ||||    
T  47991970 gtgtagggaccaatgccaaaatatgatgaaagtgcaaggactaaaggcatatttaaaccta 47992030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 48001257 - 48001317
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    |||||||||||||||||||||| ||||||||||||| | | ||||  ||||||||| ||||    
T  48001257 gtgtagggaccaatgccaaaatatgatgaaagtgcaaggactaaaggcatatttaaaccta 48001317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 48010544 - 48010604
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    |||||||||||||||||||||| ||||||||||||| | | ||||  ||||||||| ||||    
T  48010544 gtgtagggaccaatgccaaaatatgatgaaagtgcaaggactaaaggcatatttaaaccta 48010604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 51753953 - 51753901
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatt 99  Q
    |||||||||||||| ||||||||||||||||||||| | | |||| |||||||    
T  51753953 gtgtagggaccaataccaaaatctgatgaaagtgcaaggactaaagacatatt 51753901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 107
Target Start/End: Original strand, 54090168 - 54090224
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    |||||||||||||||||||| ||||||||||| | | |||| |||||||||| ||||    
T  54090168 agggaccaatgccaaaatctaatgaaagtgcaaggactaaagacatatttaaaccta 54090224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 102
Target Start/End: Complemental strand, 29015776 - 29015721
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    ||||||||||||||| |||||||| ||||||||||| | | |||| ||||||||||    
T  29015776 gtgtagggaccaatgtcaaaatctaatgaaagtgcaaggactaaagacatatttaa 29015721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 82
Target Start/End: Original strand, 38443639 - 38443674
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgca 82  Q
    |||||||||||||| |||||||||||||||||||||    
T  38443639 gtgtagggaccaataccaaaatctgatgaaagtgca 38443674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 82
Target Start/End: Complemental strand, 44638471 - 44638436
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgca 82  Q
    ||||||||||||||||||||||||||| ||||||||    
T  44638471 gtgtagggaccaatgccaaaatctgataaaagtgca 44638436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 3017531 - 3017564
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||| ||||||    
T  3017531 agggaccaatgccaaaatctgatgaaaatgcagg 3017564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 80
Target Start/End: Original strand, 16222836 - 16222865
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtg 80  Q
    ||||||||||||||||||||||||||||||    
T  16222836 agggaccaatgccaaaatctgatgaaagtg 16222865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 19988196 - 19988229
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    |||||||||||||||||||||| |||||||||||    
T  19988196 agggaccaatgccaaaatctgaagaaagtgcagg 19988229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 19988227 - 19988260
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    |||||||||||||||||||||| |||||||||||    
T  19988227 agggaccaatgccaaaatctgaagaaagtgcagg 19988260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 80
Target Start/End: Original strand, 23461190 - 23461219
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtg 80  Q
    ||||||||||||||||||||||||||||||    
T  23461190 agggaccaatgccaaaatctgatgaaagtg 23461219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 34682333 - 34682300
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    |||||||||| |||||||||||||||||||||||    
T  34682333 agggaccaataccaaaatctgatgaaagtgcagg 34682300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 80
Target Start/End: Complemental strand, 35565096 - 35565067
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtg 80  Q
    ||||||||||||||||||||||||||||||    
T  35565096 agggaccaatgccaaaatctgatgaaagtg 35565067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 44398235 - 44398268
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||| ||||||||||||||||||||||||||||    
T  44398235 agggatcaatgccaaaatctgatgaaagtgcagg 44398268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 80
Target Start/End: Complemental strand, 55328498 - 55328466
Alignment:
Q  48 tgtagggaccaatgccaaaatctgatgaaagtg 80  Q
    |||||||||||||| ||||||||||||||||||    
T  55328498 tgtagggaccaatgtcaaaatctgatgaaagtg 55328466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 6e-18; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 105
Target Start/End: Complemental strand, 18906982 - 18906924
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagcc 105  Q
    |||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||    
T  18906982 gtgtagggaccaatgccaaaatctgatgaaagtgcagggactaaagacatatttaagcc 18906924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 9777295 - 9777382
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    |||||||||||| |||||||||||        |||||||||||||||||||||||||||||||||||| | | |||| ||||||||||    
T  9777295 aaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaa 9777382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 106
Target Start/End: Original strand, 11108762 - 11108821
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagcct 106  Q
    |||||||||||||||||||||||||||||||||||||| | |||| | ||||||||||||    
T  11108762 gtgtagggaccaatgccaaaatctgatgaaagtgcagggactaaagatatatttaagcct 11108821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 32928037 - 32928124
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    |||||||||||| |||||||||||        |||||||||||||||||||||||||||||||||||| | | |||| ||||||||||    
T  32928037 aaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaa 32928124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 32504037 - 32503968
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagcctactttatttt 116  Q
    |||||||||||||||||||||||||||||||||| | | | |||| |||||||||| |||| ||||||||    
T  32504037 gtgtagggaccaatgccaaaatctgatgaaagtgtaaggactaaagacatatttaaacctattttatttt 32503968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 42434974 - 42435063
Alignment:
Q  17 agtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagcct 106  Q
    |||| |||||||||||||||||        |||||||||||||||||||||||||||||||||||||  | |||  ||||||||||||||    
T  42434974 agtgtagggatcaattccaaacaaaataaagtgtagggaccaatgccaaaatctgatgaaagtgcagagactaatgacatatttaagcct 42435063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 106
Target Start/End: Original strand, 3963379 - 3963439
Alignment:
Q  47 gtgtagggaccaa-tgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagcct 106  Q
    ||||||||||||| ||||||||||||||||||||||||| | |||| ||||||||||||||    
T  3963379 gtgtagggaccaaatgccaaaatctgatgaaagtgcagggactaaagacatatttaagcct 3963439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 7900318 - 7900258
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    |||||||||||||||| ||||||||||||||||||||| | |||| | |||||||||||||    
T  7900318 gtgtagggaccaatgctaaaatctgatgaaagtgcagggactaaagatatatttaagccta 7900258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 25263704 - 25263764
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    |||||||||||||||||||||||||||||||||||| | | ||||| ||||||||| ||||    
T  25263704 gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaagcatatttaaaccta 25263764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 34825740 - 34825680
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    |||||||||||||||||||||| ||||||||||||||  | |||| |||||||||||||||    
T  34825740 gtgtagggaccaatgccaaaatatgatgaaagtgcagagactaaagacatatttaagccta 34825680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 107
Target Start/End: Complemental strand, 40691486 - 40691394
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    |||||||||||| |||||||||||         ||||||||||||||||||||||||||||||||||| | | |||| |||||||||| ||||    
T  40691486 aaagtgcagggaccaattccaaacaaaaaaaaatgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaaccta 40691394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 42813933 - 42813873
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    ||||||||||||||| |||||||||||||||||||| | | ||||||||||||||| ||||    
T  42813933 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaggactaaaaacatatttaaaccta 42813873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 47 - 102
Target Start/End: Complemental strand, 430631 - 430576
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    |||||||||||||||||||||||||||||||||||| | | |||| ||||||||||    
T  430631 gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaa 430576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 18707846 - 18707933
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    |||||||| |||||||||||||||        |||||| ||||||||||||||||||||||||||||| | | |||| ||||||||||    
T  18707846 aaagtgcaaggatcaattccaaacaaaaaaaagtgtagagaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaa 18707933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 32653904 - 32653837
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgca 82  Q
    |||||||||||| |||||||||||        ||||||||||||||||||||||||||||||||||||    
T  32653904 aaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgca 32653837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 51 - 105
Target Start/End: Complemental strand, 39060460 - 39060406
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagcc 105  Q
    |||||||||| ||||||||||||||||||||||| | |||| |||||||||||||    
T  39060460 agggaccaataccaaaatctgatgaaagtgcagggactaaagacatatttaagcc 39060406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 4902921 - 4902990
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    |||||||||||| |||||||||||        ||| ||||||||||||||||||||||||||||||||||    
T  4902921 aaagtgcagggaccaattccaaacaaaaaaaagtgcagggaccaatgccaaaatctgatgaaagtgcagg 4902990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 107
Target Start/End: Original strand, 33850777 - 33850869
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    |||||||||||| |||||||||||        |||||||| ||||||||||||||||||||||||||| | | ||||  ||||||||| ||||    
T  33850777 aaagtgcagggaccaattccaaacaaaaaaaagtgtaggggccaatgccaaaatctgatgaaagtgcaaggactaaatgcatatttaaaccta 33850869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 82
Target Start/End: Original strand, 970793 - 970828
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgca 82  Q
    ||||||||||||||||||||||||||||||||||||    
T  970793 gtgtagggaccaatgccaaaatctgatgaaagtgca 970828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 3952269 - 3952324
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    ||||| |||||||||||||||||||||||||||||| | | |||| ||||||||||    
T  3952269 gtgtatggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaa 3952324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 5674348 - 5674403
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    |||||||||||||||| |||||||||| |||||||| ||| |||| ||||||||||    
T  5674348 gtgtagggaccaatgctaaaatctgataaaagtgcaagaactaaagacatatttaa 5674403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 11278085 - 11277998
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    ||||||||||||||||||| ||||        || ||||||| ||||| ||||||||||||||||||| | | |||||||||||||||    
T  11278085 aaagtgcagggatcaattctaaacaaaaaaaagtttagggactaatgctaaaatctgatgaaagtgcaaggactaaaaacatatttaa 11277998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 106
Target Start/End: Original strand, 19591678 - 19591769
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagcct 106  Q
    |||||||||||| |||||||||||        ||||||||||||||| ||||||||||||||||| ||||   |||| |||| |||||||||    
T  19591678 aaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgacaaaatctgatgaaagtacaggggctaaagacatgtttaagcct 19591769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 105
Target Start/End: Complemental strand, 18478466 - 18478376
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagcc 105  Q
    |||||||||||| |||||||||||        |||||||||| |||| ||||||||||||||| |||||| | ||||  ||||||||||||    
T  18478466 aaagtgcagggaccaattccaaacaaaaaaaagtgtagggactaatgtcaaaatctgatgaaaatgcagggactaaaggcatatttaagcc 18478376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 430878 - 430911
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  430878 agggaccaatgccaaaatctgatgaaagtgcagg 430911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 2098624 - 2098657
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  2098624 agggaccaatgccaaaatctgatgaaagtgcagg 2098657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 9777025 - 9776992
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  9777025 agggaccaatgccaaaatctgatgaaagtgcagg 9776992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 18707547 - 18707514
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  18707547 agggaccaatgccaaaatctgatgaaagtgcagg 18707514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 32504340 - 32504373
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  32504340 agggaccaatgccaaaatctgatgaaagtgcagg 32504373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 32927764 - 32927731
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  32927764 agggaccaatgccaaaatctgatgaaagtgcagg 32927731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 40691643 - 40691676
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  40691643 agggaccaatgccaaaatctgatgaaagtgcagg 40691676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 8031129 - 8031069
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    ||||| ||||||||| |||||||||||||||||||| | | |||| |||||||||| ||||    
T  8031129 gtgtatggaccaatgtcaaaatctgatgaaagtgcaaggactaaagacatatttaaaccta 8031069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 14102662 - 14102598
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagt 79  Q
    |||||||||||| |||||||||||        ||||||||||||||||||||||||||| |||||    
T  14102662 aaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgataaaagt 14102598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 107
Target Start/End: Complemental strand, 28625517 - 28625461
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    |||||| |||||||||||| |||||||||||||| | |||| |||||||||| ||||    
T  28625517 agggactaatgccaaaatccgatgaaagtgcagggagtaaagacatatttaaaccta 28625461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 41186307 - 41186247
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    |||||| ||||||||||||||||||||||||||||| | |  ||| |||||||||| ||||    
T  41186307 gtgtagagaccaatgccaaaatctgatgaaagtgcatggaccaaagacatatttaaaccta 41186247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 82
Target Start/End: Original strand, 14827855 - 14827886
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgca 82  Q
    ||||||||||||||||||||||||||||||||    
T  14827855 agggaccaatgccaaaatctgatgaaagtgca 14827886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 970491 - 970458
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||| ||||||||||||||||||||||||||||    
T  970491 agggatcaatgccaaaatctgatgaaagtgcagg 970458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 4902677 - 4902644
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||| ||||||||||||||||||||||    
T  4902677 agggaccaatgacaaaatctgatgaaagtgcagg 4902644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 4950075 - 4950042
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||| ||||||||||||||||||||||    
T  4950075 agggaccaatgtcaaaatctgatgaaagtgcagg 4950042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 84
Target Start/End: Complemental strand, 5674053 - 5674016
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||| ||||||||||| ||||||||||    
T  5674053 gtgtagggaccaatgtcaaaatctgataaaagtgcagg 5674016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 16265639 - 16265606
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||| ||||||||||||||||||||||    
T  16265639 agggaccaatgtcaaaatctgatgaaagtgcagg 16265606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 18478652 - 18478685
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||| ||||    
T  18478652 agggaccaatgccaaaatctgatgaaagtccagg 18478685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 33850507 - 33850474
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||| ||||||||||||||||||||||||||||    
T  33850507 agggatcaatgccaaaatctgatgaaagtgcagg 33850474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 34826043 - 34826076
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    |||||||||| |||||||||||||||||||||||    
T  34826043 agggaccaataccaaaatctgatgaaagtgcagg 34826076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 41186605 - 41186638
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||| ||||||||||||||||||||||    
T  41186605 agggaccaatgtcaaaatctgatgaaagtgcagg 41186638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 42814315 - 42814348
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    |||||| |||||||||||||||||||||||||||    
T  42814315 agggactaatgccaaaatctgatgaaagtgcagg 42814348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 45002899 - 45002866
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||| ||||||||    
T  45002899 agggaccaatgccaaaatctgatgagagtgcagg 45002866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 83
Target Start/End: Original strand, 28625826 - 28625858
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcag 83  Q
    ||||||||||| |||||||||||||||||||||    
T  28625826 agggaccaatgtcaaaatctgatgaaagtgcag 28625858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 107
Target Start/End: Complemental strand, 30415263 - 30415207
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    ||||||||||| ||||||  | |||||||||||||| |||  |||||||||||||||    
T  30415263 agggaccaatgtcaaaattgggtgaaagtgcaggaactaatcacatatttaagccta 30415207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 2e-17; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 112
Target Start/End: Complemental strand, 5214356 - 5214259
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagcctacttta 112  Q
    |||||||||||| |||||||||||        |||||||||||||||||||||||||||||||||||| | | |||| |||||||||| |||| ||||    
T  5214356 aaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaacctaattta 5214259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 47 - 103
Target Start/End: Complemental strand, 3578057 - 3578001
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaag 103  Q
    |||||||||||||||||||||||||||||||||||||| | |||| |||||||||||    
T  3578057 gtgtagggaccaatgccaaaatctgatgaaagtgcagggactaaagacatatttaag 3578001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 48 - 107
Target Start/End: Original strand, 974182 - 974241
Alignment:
Q  48 tgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    ||||||||||||| ||||||||||||||||||||||| | |||| |||||||||||||||    
T  974182 tgtagggaccaataccaaaatctgatgaaagtgcagggactaaagacatatttaagccta 974241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 106
Target Start/End: Original strand, 4717136 - 4717227
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagcct 106  Q
    |||||||||||| |||||||||||        ||||||||| |||||||||||||||||||||||||||| | ||||  |||||||||||||    
T  4717136 aaagtgcagggaccaattccaaacaaaaaaaagtgtagggatcaatgccaaaatctgatgaaagtgcagggactaaaggcatatttaagcct 4717227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 11062438 - 11062351
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    |||||||||||| |||||||||||        |||||||||||||||||||||||||||||||||||| | | |||| ||||||||||    
T  11062438 aaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaa 11062351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 26408960 - 26409047
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    |||||||||||| |||||||||||        |||||||||||||||||||||||||||||||||||| | | |||| ||||||||||    
T  26408960 aaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaa 26409047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 107
Target Start/End: Original strand, 2268577 - 2268669
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    |||||||| |||||||||||||||        |||||||||||||| ||||||||||||||||||||| | | |||| |||||||||| ||||    
T  2268577 aaagtgcaaggatcaattccaaacaaaaaaaagtgtagggaccaataccaaaatctgatgaaagtgcaaggactaaagacatatttaaaccta 2268669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 103
Target Start/End: Original strand, 9177214 - 9177270
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaag 103  Q
    |||||||||||||||||||||| ||||||||||||||||| |||| | |||||||||    
T  9177214 gtgtagggaccaatgccaaaatatgatgaaagtgcaggaactaaagatatatttaag 9177270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 22619788 - 22619843
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    |||||||||||||||||||||||||||||||||||| | | |||| ||||||||||    
T  22619788 gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaa 22619843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 23910623 - 23910690
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgca 82  Q
    |||||||||||| |||||||||||        ||||||||||||||||||||||||||||||||||||    
T  23910623 aaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgca 23910690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 39412242 - 39412155
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    |||||||||||| |||||||||||        ||||||||||||||| |||||||||||||||||||| | | |||| ||||||||||    
T  39412242 aaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgtcaaaatctgatgaaagtgcaaggactaaatacatatttaa 39412155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 102
Target Start/End: Original strand, 4621026 - 4621080
Alignment:
Q  48 tgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    ||||||||||||||||||||||||||||||||||| | | ||||| |||||||||    
T  4621026 tgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaagcatatttaa 4621080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 102
Target Start/End: Complemental strand, 8343099 - 8343045
Alignment:
Q  48 tgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    ||||||||||||||||||||||||||||||||||| | | |||| ||||||||||    
T  8343099 tgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaa 8343045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 8145030 - 8145082
Alignment:
Q  50 tagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    ||||||||||||||||||||||||||||||||| | | |||| ||||||||||    
T  8145030 tagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaa 8145082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 20166120 - 20166060
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    ||||||||| |||||||||||||||||||||||||| ||| ||||  ||||||||| ||||    
T  20166120 gtgtagggatcaatgccaaaatctgatgaaagtgcaagaactaaaggcatatttaaaccta 20166060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 17964972 - 17965039
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgca 82  Q
    |||||||||||| |||||||||||        ||||||||||||||||||||||||||| ||||||||    
T  17964972 aaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgataaaagtgca 17965039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 82
Target Start/End: Complemental strand, 18036277 - 18036242
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgca 82  Q
    ||||||||||||||||||||||||||||||||||||    
T  18036277 gtgtagggaccaatgccaaaatctgatgaaagtgca 18036242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 38245064 - 38245131
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgca 82  Q
    |||||||||||| |||||||||||        ||||| ||||||||||||||||||||||||||||||    
T  38245064 aaagtgcagggaccaattccaaacaaaaaaaagtgtatggaccaatgccaaaatctgatgaaagtgca 38245131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 38790039 - 38789972
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgca 82  Q
    |||||||||||| |||||||||||        ||||||||||||||| ||||||||||||||||||||    
T  38790039 aaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgtcaaaatctgatgaaagtgca 38789972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 2268281 - 2268248
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  2268281 agggaccaatgccaaaatctgatgaaagtgcagg 2268248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 9177048 - 9176979
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||| ||||||        ||| |||||||||| |||||||||||||||||||||||    
T  9177048 aaagtgcagggatcaatgccaaacaaaaacaagtgcagggaccaataccaaaatctgatgaaagtgcagg 9176979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 16969044 - 16969077
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  16969044 agggaccaatgccaaaatctgatgaaagtgcagg 16969077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 82
Target Start/End: Original strand, 18674205 - 18674238
Alignment:
Q  49 gtagggaccaatgccaaaatctgatgaaagtgca 82  Q
    ||||||||||||||||||||||||||||||||||    
T  18674205 gtagggaccaatgccaaaatctgatgaaagtgca 18674238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 20166425 - 20166458
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  20166425 agggaccaatgccaaaatctgatgaaagtgcagg 20166458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 84
Target Start/End: Complemental strand, 23910353 - 23910316
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  23910353 gtgtagggaccaatgtcaaaatctgatgaaagtgcagg 23910316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 25945383 - 25945350
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  25945383 agggaccaatgccaaaatctgatgaaagtgcagg 25945350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 26408691 - 26408658
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  26408691 agggaccaatgccaaaatctgatgaaagtgcagg 26408658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 27858442 - 27858409
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  27858442 agggaccaatgccaaaatctgatgaaagtgcagg 27858409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 39412478 - 39412511
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  39412478 agggaccaatgccaaaatctgatgaaagtgcagg 39412511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 25945685 - 25945717
Alignment:
Q  50 tagggaccaatgccaaaatctgatgaaagtgca 82  Q
    |||||||||||||||||||||||||||||||||    
T  25945685 tagggaccaatgccaaaatctgatgaaagtgca 25945717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 82
Target Start/End: Original strand, 13198243 - 13198274
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgca 82  Q
    ||||||||||||||||||||||||||||||||    
T  13198243 agggaccaatgccaaaatctgatgaaagtgca 13198274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 102
Target Start/End: Complemental strand, 15440578 - 15440523
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    |||||||||||||| |||||||||||| |||||||| | | |||| ||||||||||    
T  15440578 gtgtagggaccaataccaaaatctgataaaagtgcaaggactaaatacatatttaa 15440523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 84
Target Start/End: Original strand, 15442980 - 15443011
Alignment:
Q  53 ggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||    
T  15442980 ggaccaatgccaaaatctgatgaaagtgcagg 15443011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 86
Target Start/End: Complemental strand, 17964703 - 17964668
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcaggaa 86  Q
    |||||||||||| |||||||||||||||||||||||    
T  17964703 agggaccaatgcaaaaatctgatgaaagtgcaggaa 17964668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 102
Target Start/End: Complemental strand, 30491951 - 30491896
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    |||||||||||||||| |||||||||| |||||||| | | |||| ||||||||||    
T  30491951 gtgtagggaccaatgcaaaaatctgataaaagtgcaaggactaaagacatatttaa 30491896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 107
Target Start/End: Complemental strand, 34929595 - 34929536
Alignment:
Q  48 tgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    |||||||| ||||| |||||||||||||||||||| | | |||| |||||||||| ||||    
T  34929595 tgtagggatcaatgtcaaaatctgatgaaagtgcaaggactaaagacatatttaaaccta 34929536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 82
Target Start/End: Complemental strand, 2033795 - 2033761
Alignment:
Q  48 tgtagggaccaatgccaaaatctgatgaaagtgca 82  Q
    |||||| ||||||||||||||||||||||||||||    
T  2033795 tgtaggaaccaatgccaaaatctgatgaaagtgca 2033761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 973880 - 973847
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    |||||||||||||||||| |||||||||||||||    
T  973880 agggaccaatgccaaaatttgatgaaagtgcagg 973847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 5907314 - 5907281
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    |||||||||||||||||| |||||||||||||||    
T  5907314 agggaccaatgccaaaatttgatgaaagtgcagg 5907281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 84
Target Start/End: Original strand, 8343392 - 8343421
Alignment:
Q  55 accaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||    
T  8343392 accaatgccaaaatctgatgaaagtgcagg 8343421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 11062677 - 11062710
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    |||||||||| |||||||||||||||||||||||    
T  11062677 agggaccaataccaaaatctgatgaaagtgcagg 11062710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 18705577 - 18705544
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    |||||||||| |||||||||||||||||||||||    
T  18705577 agggaccaataccaaaatctgatgaaagtgcagg 18705544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 23592811 - 23592844
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||| ||||||||||||||||||||||    
T  23592811 agggaccaatgtcaaaatctgatgaaagtgcagg 23592844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 80
Target Start/End: Original strand, 30492194 - 30492227
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtg 80  Q
    ||||||||||||||||||||||||||| ||||||    
T  30492194 gtgtagggaccaatgccaaaatctgataaaagtg 30492227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 83
Target Start/End: Complemental strand, 3023451 - 3023419
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcag 83  Q
    |||||||||| ||||||||||||||||||||||    
T  3023451 agggaccaataccaaaatctgatgaaagtgcag 3023419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 83
Target Start/End: Complemental strand, 22619501 - 22619469
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcag 83  Q
    ||||| |||||||||||||||||||||||||||    
T  22619501 agggaacaatgccaaaatctgatgaaagtgcag 22619469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 1356 - 1269
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    |||||||||||| |||||||||||        |||||||||||||||||||||||||||||||||||| | | |||| ||||||||||    
T  1356 aaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaa 1269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 5599 - 5512
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    |||||||||||| |||||||||||        |||||||||||||||||||||||||||||||||||| | | |||| ||||||||||    
T  5599 aaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaa 5512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 5814 - 5847
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  5814 agggaccaatgccaaaatctgatgaaagtgcagg 5847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 35392 - 35332
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    |||||| ||||||||||||||||||||||||||||| | |||||| |||||||||| ||||    
T  35392 gtgtagtgaccaatgccaaaatctgatgaaagtgcaaggattaaagacatatttaaaccta 35332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 35698 - 35731
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||| ||||||||||||||||||||||||||||    
T  35698 agggatcaatgccaaaatctgatgaaagtgcagg 35731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1095 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold1095
Description:

Target: scaffold1095; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 22 - 77
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    |||||||||||||||||||||||||||||||||||| | | |||| ||||||||||    
T  22 gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaa 77  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 6382 - 6437
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    |||||||||||||||||||||||||||||||||||| | | |||| ||||||||||    
T  6382 gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaa 6437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 83
Target Start/End: Complemental strand, 6088 - 6052
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcag 83  Q
    |||||||||||||||||||||||||||||||||||||    
T  6088 gtgtagggaccaatgccaaaatctgatgaaagtgcag 6052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 47 - 106
Target Start/End: Complemental strand, 13026 - 12967
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagcct 106  Q
    |||||||||||||||||||||| ||||||||||||||| | ||||  |||||||||||||    
T  13026 gtgtagggaccaatgccaaaatttgatgaaagtgcagggactaaaggcatatttaagcct 12967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 9859 - 9946
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaa 102  Q
    |||||||||||| |||||||||||        ||||||||||||||||||||||||||| |||||||| | ||||||  |||||||||    
T  9859 aaagtgcagggaccaattccaaacaaaaaatggtgtagggaccaatgccaaaatctgataaaagtgcaaggattaaaggcatatttaa 9946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 9640 - 9607
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  9640 agggaccaatgccaaaatctgatgaaagtgcagg 9607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0838 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 57 - 111
Target Start/End: Complemental strand, 5316 - 5262
Alignment:
Q  57 caatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagcctacttt 111  Q
    |||||| ||||||||||||||||||| ||| |||| |||||||||||||||||||    
T  5316 caatgctaaaatctgatgaaagtgcatgaactaaagacatatttaagcctacttt 5262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0832 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 57 - 111
Target Start/End: Complemental strand, 5347 - 5293
Alignment:
Q  57 caatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagcctacttt 111  Q
    |||||| ||||||||||||||||||| ||| |||| |||||||||||||||||||    
T  5347 caatgctaaaatctgatgaaagtgcatgaactaaagacatatttaagcctacttt 5293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 57714 - 57783
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||| ||||||        ||| ||||||||||||||||||||||||||||||||||    
T  57714 aaagtgcagggatcaatgccaaacgaaaaaaagtgcagggaccaatgccaaaatctgatgaaagtgcagg 57783  T

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Target: scaffold0079; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 107
Target Start/End: Complemental strand, 57479 - 57387
Alignment:
Q  15 aaagtgcagggatcaattccaaacnnnnnnnngtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    |||||||||||| |||||||||||        |||||||||||||||||||||| ||||||||||| | | | |||| |||||||||| ||||    
T  57479 aaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatatgatgaaagtgtaaggactaaatacatatttaaaccta 57387  T

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Target: scaffold0302 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 14179 - 14146
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    ||||||||||||||||||||||||||||||||||    
T  14179 agggaccaatgccaaaatctgatgaaagtgcagg 14146  T

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Target: scaffold0302; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 14480 - 14540
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgcaggaattaaaaacatatttaagccta 107  Q
    |||||||||||||| ||||||||||||||||||||| | | ||||  ||||||||| ||||    
T  14480 gtgtagggaccaataccaaaatctgatgaaagtgcaaggactaaaggcatatttaaaccta 14540  T

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Target: scaffold0825 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0825
Description:

Target: scaffold0825; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 82
Target Start/End: Complemental strand, 1232 - 1197
Alignment:
Q  47 gtgtagggaccaatgccaaaatctgatgaaagtgca 82  Q
    ||||||||| ||||||||||||||||||||||||||    
T  1232 gtgtagggatcaatgccaaaatctgatgaaagtgca 1197  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 82
Target Start/End: Original strand, 58778 - 58809
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgca 82  Q
    ||||||||||||||||||||||||||||||||    
T  58778 agggaccaatgccaaaatctgatgaaagtgca 58809  T

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Target: scaffold0036 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 17195 - 17228
Alignment:
Q  51 agggaccaatgccaaaatctgatgaaagtgcagg 84  Q
    |||||||||||||||||||| |||||||||||||    
T  17195 agggaccaatgccaaaatctaatgaaagtgcagg 17228  T

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