View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11374_low_44 (Length: 240)

Name: NF11374_low_44
Description: NF11374
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11374_low_44
NF11374_low_44
[»] chr7 (7 HSPs)
chr7 (18-240)||(26762690-26762912)
chr7 (33-203)||(16203848-16204020)
chr7 (37-238)||(16986891-16987091)
chr7 (128-240)||(5863277-5863389)
chr7 (33-178)||(16204442-16204589)
chr7 (122-240)||(9135245-9135362)
chr7 (132-240)||(43171929-43172037)
[»] chr2 (5 HSPs)
chr2 (21-240)||(3586453-3586673)
chr2 (21-164)||(23493807-23493950)
chr2 (21-177)||(12127444-12127601)
chr2 (21-105)||(24500010-24500094)
chr2 (50-178)||(36267650-36267778)
[»] chr6 (10 HSPs)
chr6 (29-240)||(19305554-19305763)
chr6 (49-189)||(33597002-33597143)
chr6 (29-231)||(689648-689850)
chr6 (21-67)||(17380308-17380354)
chr6 (54-172)||(22572202-22572320)
chr6 (21-191)||(11087641-11087813)
chr6 (132-240)||(18147396-18147504)
chr6 (122-238)||(20148407-20148523)
chr6 (122-238)||(22184305-22184421)
chr6 (164-240)||(27860873-27860949)
[»] chr4 (6 HSPs)
chr4 (30-172)||(29157260-29157400)
chr4 (132-225)||(2674467-2674560)
chr4 (18-114)||(12684001-12684098)
chr4 (32-191)||(47253415-47253576)
chr4 (21-105)||(17218778-17218862)
chr4 (118-240)||(19643792-19643913)
[»] chr3 (6 HSPs)
chr3 (150-240)||(16704492-16704582)
chr3 (49-178)||(17143559-17143688)
chr3 (29-103)||(20622634-20622708)
chr3 (132-184)||(9800978-9801030)
chr3 (29-88)||(8122704-8122763)
chr3 (159-238)||(25496030-25496109)
[»] chr8 (8 HSPs)
chr8 (132-236)||(5859909-5860013)
chr8 (149-240)||(17698195-17698286)
chr8 (124-236)||(18323037-18323149)
chr8 (118-188)||(13754899-13754970)
chr8 (165-240)||(23269324-23269399)
chr8 (123-177)||(30477794-30477848)
chr8 (132-177)||(6927987-6928032)
chr8 (21-94)||(21416961-21417033)
[»] chr1 (3 HSPs)
chr1 (21-92)||(26977986-26978057)
chr1 (21-178)||(22414927-22415085)
chr1 (137-199)||(2140846-2140909)
[»] scaffold0291 (1 HSPs)
scaffold0291 (21-103)||(8363-8445)
[»] scaffold0023 (2 HSPs)
scaffold0023 (134-240)||(95705-95811)
scaffold0023 (21-111)||(93395-93485)
[»] chr5 (2 HSPs)
chr5 (21-191)||(32418268-32418438)
chr5 (32-95)||(19990868-19990932)
[»] scaffold0360 (1 HSPs)
scaffold0360 (135-240)||(14012-14117)
[»] scaffold0126 (1 HSPs)
scaffold0126 (59-176)||(31655-31772)
[»] scaffold0002 (1 HSPs)
scaffold0002 (167-240)||(379806-379879)
[»] scaffold0101 (1 HSPs)
scaffold0101 (124-156)||(10620-10652)


Alignment Details
Target: chr7 (Bit Score: 191; Significance: 1e-104; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 18 - 240
Target Start/End: Original strand, 26762690 - 26762912
Alignment:
Q  18 cataagaccattcacacgttgacatgtggtctaacttacaccgccttaaggctccgcctctgatggaacacgccaactcaagtgcaccacgccacaccgt 117  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  26762690 cataagaccaatcacacgttgacacgtggtctaacttacaccgccttaaggctcagcctctgagggaacacgccaactcaagtgcaccacgccacaccgt 26762789  T
Q  118 agcacgcccccgcacgaggatcaccatacaagtgtcctctaaccgttcctaatcacacgccccaaaatccggaggtggttatcaacaacacgcgcctata 217  Q
    |||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26762790 agcacgcccctgcgcgaggatcaccatacaagtgtcctctaaccgtccctaatcacacgccccaaaacccggaggtggttatcaacaacacgcgcctata 26762889  T
Q  218 tatgggtgtccttgcttcaccct 240  Q
    |||||||||||||||||||||||    
T  26762890 tatgggtgtccttgcttcaccct 26762912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 203
Target Start/End: Complemental strand, 16204020 - 16203848
Alignment:
Q  33 acgttgacatgtggtctaa-cttacaccgccttaaggctccgcctctgatggaacacgccaactcaagtgcaccacgccacaccgtagcacgcccccgca 131  Q
    ||||||||| |||| |||| |||||||||||||||||||||||  |||| |||||||  |||||  |||||||| || | ||||  ||||| |  || ||    
T  16204020 acgttgacacgtggcctaagcttacaccgccttaaggctccgcacctgaaggaacacaacaactttagtgcaccgcgtctcaccaaagcacacatccaca 16203921  T
Q  132 cgaggatcaccatacaagtgtcctctaaccg-ttcctaatcacacgccccaaaatccggaggtggttatcaac 203  Q
    ||||||||||| |||| |||||||||||||| | |||||||||||||| | |||  |||||  ||||||||||    
T  16203920 cgaggatcaccctacacgtgtcctctaaccgctccctaatcacacgccacgaaacacggagacggttatcaac 16203848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 37 - 238
Target Start/End: Original strand, 16986891 - 16987091
Alignment:
Q  37 tgacatgtggtctaacttacaccgccttaaggctccgcctctgatggaacacgccaactcaagtgcaccacgccacaccgtagcacgcccccgcacgagg 136  Q
    ||||| |||||| ||||| ||||||||||||||||||| ||||| ||| |||||||||||   ||||||  ||||||  | ||   |||| ||||| |||    
T  16986891 tgacacgtggtcaaacttgcaccgccttaaggctccgcgtctgaaggagcacgccaactcgcatgcaccgtgccacataggagtgtgccctcgcacaagg 16986990  T
Q  137 atcaccatacaagtgtcct-ctaaccgttcctaatcacacgccccaaaatccggaggtggttatcaacaacacgcgcctatatatgggtgtccttgcttc 235  Q
    |||||| | || ||||||| ||  || | ||||||||||| || || |||||||||  ||||||   |||| |||||||||||| |||||  ||||||||    
T  16986991 atcaccctgcacgtgtcctgct--ccatccctaatcacacaccgcataatccggagacggttatggccaacgcgcgcctatataagggtgaacttgcttc 16987088  T
Q  236 acc 238  Q
    |||    
T  16987089 acc 16987091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 128 - 240
Target Start/End: Complemental strand, 5863389 - 5863277
Alignment:
Q  128 cgcacgaggatcaccatacaagtgtcctctaaccgttcctaatcacacgccccaaaatccggaggtggttatcaacaacacgcgcctatatatgggtgtc 227  Q
    ||||||||||||||  |||| ||||||||||||||| |||||||||| |||   ||| ||||||| ||||||   |||| |||||||||| | ||||| |    
T  5863389 cgcacgaggatcacgttacacgtgtcctctaaccgtccctaatcacatgccgtgaaacccggaggcggttatttccaacgcgcgcctatacaagggtgac 5863290  T
Q  228 cttgcttcaccct 240  Q
     ||||| ||||||    
T  5863289 attgctccaccct 5863277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 178
Target Start/End: Complemental strand, 16204589 - 16204442
Alignment:
Q  33 acgttgacatgtggtctaa-cttacaccgccttaaggctccgcctctgatggaacacgccaactcaagtgcaccacgccacaccgtagcacgcccccgca 131  Q
    ||||||||| |||| |||| |||||||||||||||||||||||  |||| | ||||| ||||||  |||||||   | | ||||  ||| | |  || |     
T  16204589 acgttgacacgtggcctaagcttacaccgccttaaggctccgcacctgacgcaacacaccaactttagtgcactgtgtctcaccaaagctcacatccacg 16204490  T
Q  132 cgaggatcaccatacaagtgtcctctaaccg-ttcctaatcacacgcc 178  Q
    ||||||||||| |||| |||||||||||||| | ||||||||||||||    
T  16204489 cgaggatcaccctacacgtgtcctctaaccgctccctaatcacacgcc 16204442  T

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Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 9135245 - 9135362
Alignment:
Q  122 cgcccccgcacgaggatcaccatacaagtgtcctctaaccgttcctaatcacacgccccaaaatccggaggtggttatcaacaacacgcgcctatatatg 221  Q
    ||||||||||||||||||||| |||| ||||||||   |||| |||||||||||||  || || ||||||  |||||| | ||| ||| | ||||||| |    
T  9135245 cgcccccgcacgaggatcaccttacatgtgtcctc-ctccgtccctaatcacacgctacataacccggagacggttatgaccaatacgtgtctatataag 9135343  T
Q  222 ggtgtccttgcttcaccct 240  Q
    ||||   ||||||||||||    
T  9135344 ggtgaatttgcttcaccct 9135362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 240
Target Start/End: Original strand, 43171929 - 43172037
Alignment:
Q  132 cgaggatcaccatacaagtgtcctctaaccgttcctaatcacacgccccaaaatccggaggtggttatcaacaacacgcgcctatatatgggtgtccttg 231  Q
    ||||||||||| | |  |||||||||||| ||||||||||| | ||| ||||| |||||||  |||||   |||  |||||||||||| |||||   |||    
T  43171929 cgaggatcaccctccccgtgtcctctaactgttcctaatcaaatgccgcaaaacccggaggcagttattctcaatccgcgcctatataagggtgaagttg 43172028  T
Q  232 cttcaccct 240  Q
    |||||||||    
T  43172029 cttcaccct 43172037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 6e-24; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 21 - 240
Target Start/End: Complemental strand, 3586673 - 3586453
Alignment:
Q  21 aagaccattcacacgttgacatgtggtctaa-cttacaccgccttaaggctccgcctctgatggaacacgccaactcaagtgcaccacgccacaccgtag 119  Q
    ||||||| ||||||||| ||| ||||  ||| |||||| || |||||||||||||   ||| ||||||||||| ||| |||  ||| | |||||| | ||    
T  3586673 aagaccaatcacacgttaacacgtggcataaacttacatcgtcttaaggctccgcgcttgagggaacacgccagctcgagtaaaccgcaccacacagaag 3586574  T
Q  120 cacgcccccgcacgaggatcaccatacaagtgtcctctaaccgttcctaatcacacgccccaaaatccggaggtggttatcaacaacacgcgcctatata 219  Q
    ||| || |||||||||||||| | |||| ||||||||||||||| |||| ||||||||| || || |  || | |||||| | |||| ||||||||||||    
T  3586573 cacacctccgcacgaggatcatcctacatgtgtcctctaaccgtccctattcacacgccgcataaccaagaagcggttatgaccaacgcgcgcctatata 3586474  T
Q  220 tgggtgtccttgcttcaccct 240  Q
     |||||  |||||||||||||    
T  3586473 agggtgaacttgcttcaccct 3586453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 164
Target Start/End: Complemental strand, 23493950 - 23493807
Alignment:
Q  21 aagaccattcacacgttgacatgtggtctaacttacaccgccttaaggctccgcctctgatggaacacgccaactcaagtgcaccacgccacaccgtagc 120  Q
    ||||||| || |||||||||| |||| ||||||||||||||||| |||||||||   ||| || |||| ||| || || |||| | |||||||| | |||    
T  23493950 aagaccaatcgcacgttgacacgtggcctaacttacaccgccttcaggctccgcgcttgaaggtacacaccagcttaaatgcatcgcgccacacaggagc 23493851  T
Q  121 acgcccccgcacgaggatcaccatacaagtgtcctctaaccgtt 164  Q
     ||| ||| | | ||||||||| |||| ||||||||||||||||    
T  23493850 gcgctcccacgcaaggatcaccctacatgtgtcctctaaccgtt 23493807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 177
Target Start/End: Original strand, 12127444 - 12127601
Alignment:
Q  21 aagaccattcacacgttgacatgtggtctaacttacaccgccttaaggctccgcctctgatggaacacgccaactcaagtgcaccacgccacaccgtagc 120  Q
    ||||||| || | |||||||| |||  ||||||||||| || |||||||||||| ||||| ||||||||||| ||  | |||||  | |||||   |||     
T  12127444 aagaccaatccctcgttgacacgtgacctaacttacactgcattaaggctccgcatctgaaggaacacgccagctttaatgcacagcaccacatactaga 12127543  T
Q  121 acg-cccccgcacgaggatcaccatacaagtgtcctctaaccgttcctaatcacacgc 177  Q
     || ||||| | ||||||||||  |||| |||| |||||||||| |||||||||||||    
T  12127544 gcgccccccacgcgaggatcactctacacgtgttctctaaccgtccctaatcacacgc 12127601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 24500094 - 24500010
Alignment:
Q  21 aagaccattcacacgttgacatgtggtctaacttacaccgccttaaggctccgcctctgatggaacacgccaactcaagtgcacc 105  Q
    ||||||| ||||| ||||||| || |  |||||||||||| |||||||||| ||  |||| | |||||| |||||||||||||||    
T  24500094 aagaccaatcacatgttgacacgtagcataacttacaccgacttaaggctctgctcctgaagaaacacgtcaactcaagtgcacc 24500010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 36267778 - 36267650
Alignment:
Q  50 aacttacaccgccttaaggctccgcctctgatggaacacgccaactcaagtgcaccacgccacaccgtagcacgcccccgcacgaggatcaccatacaag 149  Q
    ||||||||||| |||||||||  ||  | || | ||||||||| ||||| ||||||   ||| || | ||||||||||||| ||||||||||| || | |    
T  36267778 aacttacaccgtcttaaggctttgcgccggaagaaacacgccagctcaattgcaccgtcccatactgaagcacgcccccgcgcgaggatcaccctatacg 36267679  T
Q  150 tgtcctctaaccgttcctaatcacacgcc 178  Q
    |||| ||||||||| || ||||| |||||    
T  36267678 tgtcttctaaccgtcccaaatcatacgcc 36267650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 2e-23; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 29 - 240
Target Start/End: Complemental strand, 19305763 - 19305554
Alignment:
Q  29 tcacacgttgacatgtggtctaacttacaccgccttaaggctccgcctctgatggaacacgccaactcaagtgcaccacgccacaccgtagcacgccccc 128  Q
    |||||||||||||||| | |||| |||||||||  |||||||||||  |||| ||||||||||| |||||||||||| |||||||  |||||  |||| |    
T  19305763 tcacacgttgacatgtagcctaa-ttacaccgctataaggctccgctcctgaaggaacacgccatctcaagtgcaccgcgccacaaagtagcttgcccgc 19305665  T
Q  129 gcacgaggatcaccatacaagtgtcctctaaccgttcctaatcacacgccccaaaatccggaggtggttatcaacaacacgcgcctatatatgggtgtcc 228  Q
     | ||||||||||| |||| ||||||||||| | | ||||||||||| || |||||  || | | | |||||   ||| ||||||||| || ||||| ||    
T  19305664 -cgcgaggatcaccctacacgtgtcctctaatcttccctaatcacaccccgcaaaactcgaaagagtttatccttaactcgcgcctatttaagggtgacc 19305566  T
Q  229 ttgcttcaccct 240  Q
    ||||||||||||    
T  19305565 ttgcttcaccct 19305554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 49 - 189
Target Start/End: Complemental strand, 33597143 - 33597002
Alignment:
Q  49 taacttacaccgccttaaggctccgcctctgatggaacacgccaactcaagtgcaccacgccacaccgtagcacgcc-cccgcacgaggatcaccataca 147  Q
    ||||||||||| ||||||||||||||  |||| ||||||||||||||||||||| ||  |||||||   ||  |||| ||||| ||||| ||| | ||||    
T  33597143 taacttacaccaccttaaggctccgcgcctgagggaacacgccaactcaagtgctccgtgccacacatgagtgcgcctcccgcgcgagggtcatcctaca 33597044  T
Q  148 agtgtcctctaaccgttcctaatcacacgccccaaaatccgg 189  Q
     ||||||||||||||  |||||||| ||||| || |||||||    
T  33597043 tgtgtcctctaaccgcccctaatcatacgccgcataatccgg 33597002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 231
Target Start/End: Original strand, 689648 - 689850
Alignment:
Q  29 tcacacgttgacatgtggtctaacttacaccgccttaaggctccgcctctgatggaacacgccaactcaagtgcaccacgccacaccgtagcacgccccc 128  Q
    |||||||| |||| || | |||| ||||||||||||||| ||||||  |||| || ||| | |  ||||||||||||  |||||||   |||||| ||||    
T  689648 tcacacgtcgacacgttgcctaagttacaccgccttaagactccgcacctgagggtacatgtctgctcaagtgcaccgtgccacacaagagcacgtcccc 689747  T
Q  129 gcacgaggatcaccatacaagtgtcctctaaccgttcctaatcacacgccccaaaatccggaggtggttatcaacaacacgcgcctatatatgggtgtcc 228  Q
    || |||||| |||| | || || ||||||||| || | |||||||||||| |||||  |||||  | |||| | ||||  ||||||||||| ||||| ||    
T  689748 gcgcgaggaccacccttcacgtatcctctaactgtccttaatcacacgccgcaaaactcggagacgattatgatcaacgtgcgcctatataagggtgacc 689847  T
Q  229 ttg 231  Q
    |||    
T  689848 ttg 689850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 17380354 - 17380308
Alignment:
Q  21 aagaccattcacacgttgacatgtggtctaacttacaccgccttaag 67  Q
    ||||||| || ||||||||||||||| ||||||||||||||||||||    
T  17380354 aagaccaatcccacgttgacatgtggcctaacttacaccgccttaag 17380308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 172
Target Start/End: Complemental strand, 22572320 - 22572202
Alignment:
Q  54 tacaccgccttaaggctccgcctctgatggaacacgccaactcaagtgcaccacgccacaccgtagcacgcccccgcacgaggatcaccatacaagtgtc 153  Q
    ||||||| ||||||||||||| ||| | ||| ||||  | ||| |||||||||| ||| || | ||||| |||  | ||||||||||||  ||| |||||    
T  22572320 tacaccgtcttaaggctccgcatctaaaggagcacgtaagctctagtgcaccacaccagacagaagcacacccatgtacgaggatcaccccacacgtgtc 22572221  T
Q  154 ctctaaccgttcctaatca 172  Q
    |||||||||| ||||||||    
T  22572220 ctctaaccgtccctaatca 22572202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 191
Target Start/End: Complemental strand, 11087813 - 11087641
Alignment:
Q  21 aagaccattcacacgttgacatgtggtctaa-cttacaccgccttaaggctccgc-ctctgatggaacacgccaactcaagtgcaccacgccacaccgta 118  Q
    ||||||| ||||||||| ||| ||||  ||| ||||||||| ||||||||||||| ||| || ||||||| |||||| || | |||   ||||||| | |    
T  11087813 aagaccaatcacacgttaacacgtggcataaacttacaccgtcttaaggctccgcgctc-gagggaacactccaacttaaatacactgtgccacacagaa 11087715  T
Q  119 gcacg-cccccgcacgaggatcaccatacaagtgtcctctaaccgttcctaatcacacgccccaaaatccggag 191  Q
    || || |||||   ||||||||||| |||| ||||||||||||||| | |||| ||||||| || |||||||||    
T  11087714 gcgcggcccccatgcgaggatcaccctacacgtgtcctctaaccgtccttaattacacgccgcataatccggag 11087641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 240
Target Start/End: Complemental strand, 18147504 - 18147396
Alignment:
Q  132 cgaggatcaccatacaagtgtcctctaaccgttcctaatcacacgccccaaaatccggaggtggttatcaacaacacgcgcctatatatgggtgtccttg 231  Q
    ||||||||||| ||||  |||||||||||||| |||||||||||||  ||||| || |||| |||||    |||  ||| |||||||| ||||| | |||    
T  18147504 cgaggatcaccttacacatgtcctctaaccgtccctaatcacacgctgcaaaacccagaggcggttaatcccaatgcgcacctatataagggtgacattg 18147405  T
Q  232 cttcaccct 240  Q
    |||||||||    
T  18147404 cttcaccct 18147396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 238
Target Start/End: Complemental strand, 20148523 - 20148407
Alignment:
Q  122 cgcccccgcacgaggatcaccatacaagtgtcctctaaccgttcctaatcacacgccccaaaatccggaggtggttatcaacaacacgcgcctatatatg 221  Q
    |||||||||  ||||||||| |||||||| |||| |||||   |||||| ||| ||| | ||| |||||||  |||||   |||| || ||||||||| |    
T  20148523 cgcccccgcgtgaggatcactatacaagtatcctataaccaaccctaatgacatgccgcgaaacccggaggcagttattctcaacgcgtgcctatataag 20148424  T
Q  222 ggtgtccttgcttcacc 238  Q
    |||| ||||||||||||    
T  20148423 ggtgaccttgcttcacc 20148407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 238
Target Start/End: Original strand, 22184305 - 22184421
Alignment:
Q  122 cgcccccgcacgaggatcaccatacaagtgtcctctaaccgttcctaatcacacgccccaaaatccggaggtggttatcaacaacacgcgcctatatatg 221  Q
    |||||||||  ||||||||| |||||||| |||| |||||   |||||| ||| ||| | ||| |||||||  |||||   |||| || ||||||||| |    
T  22184305 cgcccccgcgtgaggatcactatacaagtatcctataaccaaccctaatgacatgccgcgaaacccggaggcagttattctcaacgcgtgcctatataag 22184404  T
Q  222 ggtgtccttgcttcacc 238  Q
    |||| ||||||||||||    
T  22184405 ggtgaccttgcttcacc 22184421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 240
Target Start/End: Original strand, 27860873 - 27860949
Alignment:
Q  164 tcctaatcacacgccccaaaatccggaggtggttatcaacaacacgcgcctatatatgggtgtccttgcttcaccct 240  Q
    ||||||||||||||| || || ||||||  ||||||   ||||||||||||||| | |||||  |||||||||||||    
T  27860873 tcctaatcacacgccgcataacccggagacggttatggccaacacgcgcctataaaagggtgaacttgcttcaccct 27860949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 2e-23; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 29157400 - 29157260
Alignment:
Q  30 cacacgttgacatgtggtctaacttacaccgccttaaggctccgcctctgatggaacacgccaactcaagtgcaccacgccacaccgtagcacgcccccg 129  Q
    |||| |||||||  |||| |||||||||||| |||||||||||||||  || ||||||||||| ||||| |||||| |||||||| | ||| |||| |||    
T  29157400 cacatgttgacacatggtataacttacaccgacttaaggctccgcct--gaaggaacacgccagctcaaatgcaccgcgccacacaggagcgcgccaccg 29157303  T
Q  130 cacgaggatcaccatacaagtgtcctctaaccgttcctaatca 172  Q
    |  |||||||| | |||| ||||||||||||||| ||||||||    
T  29157302 cgtgaggatcatcctacatgtgtcctctaaccgtccctaatca 29157260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 132 - 225
Target Start/End: Original strand, 2674467 - 2674560
Alignment:
Q  132 cgaggatcaccatacaagtgtcctctaaccgttcctaatcacacgccccaaaatccggaggtggttatcaacaacacgcgcctatatatgggtg 225  Q
    ||||||||||| |||| |||||||||||| || |||||||||||||| ||||||||||||  ||||||   |||| ||||| |||||| |||||    
T  2674467 cgaggatcaccctacacgtgtcctctaactgtccctaatcacacgccgcaaaatccggagacggttatgctcaacgcgcgcttatataagggtg 2674560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 12684098 - 12684001
Alignment:
Q  18 cataagaccattcacacgttgacatgtggtctaa-cttacaccgccttaaggctccgcctctgatggaacacgccaactcaagtgcaccacgccacac 114  Q
    |||||||||| ||||||||||||| ||||  ||| |||||| ||  |||||| |||||  |||| | ||||||||| |||||||||||| ||||||||    
T  12684098 cataagaccaatcacacgttgacacgtggcataaacttacatcgtattaagggtccgctcctgaagaaacacgccagctcaagtgcaccgcgccacac 12684001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 191
Target Start/End: Complemental strand, 47253576 - 47253415
Alignment:
Q  32 cacgttgacatgtggtctaa-cttacaccgccttaaggctccgcctctgatggaacacgccaactcaagtgcaccacgccacaccgtagcacgcccccgc 130  Q
    |||||||||| |||||| || ||| ||||||||||||||||||| ||||| |||||||  ||||    |||||||||  |||| |  || ||||| ||||    
T  47253576 cacgttgacacgtggtccaaacttgcaccgccttaaggctccgcgtctgaaggaacacatcaacgttggtgcaccacatcacatccaagtacgcctccgc 47253477  T
Q  131 acgaggatcaccatacaagtgtcctctaaccgttc-ctaatcacacgccccaaaatccggag 191  Q
     ||||||||||  |||| |||||||||||  | || |||||||||| || ||||| ||||||    
T  47253476 gcgaggatcactctacatgtgtcctctaattgctctctaatcacacaccgcaaaacccggag 47253415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 17218862 - 17218778
Alignment:
Q  21 aagaccattcacacgttgacatgtggtctaacttacaccgccttaaggctccgcctctgatggaacacgccaactcaagtgcacc 105  Q
    |||||||  |||||||| ||  ||||| ||||||||| || ||||||||||||  ||||| || |||||||||||| ||||||||    
T  17218862 aagaccaaacacacgttaacgcgtggtataacttacatcgtcttaaggctccgtgtctgaggggacacgccaactcgagtgcacc 17218778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 240
Target Start/End: Complemental strand, 19643913 - 19643792
Alignment:
Q  118 agcacgcccccgcacgaggatcaccatacaagtgtcctctaaccgttcctaatcacacgccccaaaatccggaggtggttatcaacaacacgcgcctata 217  Q
    ||||||||||||| ||||||||||| || | ||||||||| ||||| ||||||| |||||| || ||  | |||  |||||||  |||| | ||||||||    
T  19643913 agcacgcccccgcgcgaggatcaccttatatgtgtcctct-accgtccctaatctcacgccgcataactcagagacggttatcctcaacgcacgcctata 19643815  T
Q  218 tatgggtgtccttgcttcaccct 240  Q
    || |||||  |||| ||||||||    
T  19643814 taagggtgaacttgtttcaccct 19643792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 150 - 240
Target Start/End: Complemental strand, 16704582 - 16704492
Alignment:
Q  150 tgtcctctaaccgttcctaatcacacgccccaaaatccggaggtggttatcaacaacacgcgcctatatatgggtgtccttgcttcaccct 240  Q
    ||||||||||||||  ||||||||||    ||||||||||||| |||||||| |||| |||||||||||| |||||  |||||||||||||    
T  16704582 tgtcctctaaccgtctctaatcacacatagcaaaatccggaggcggttatcaccaacgcgcgcctatataagggtgaacttgcttcaccct 16704492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 49 - 178
Target Start/End: Original strand, 17143559 - 17143688
Alignment:
Q  49 taacttacaccgccttaaggctccgcctctgatggaacacgccaactcaagtgcaccacgccacaccgtagcacgcccccgcacgaggatcaccatacaa 148  Q
    ||||||||||||||||||||||| || ||||| ||||||| |||||| || | | |   | ||||| | ||||||||||| || ||||||| || ||||     
T  17143559 taacttacaccgccttaaggctctgcgtctgagggaacacaccaacttaaattctctgtgacacacagaagcacgcccccacatgaggatcgccctacat 17143658  T
Q  149 gtgtcctctaaccgttcctaatcacacgcc 178  Q
    ||||||||||  ||| ||||||||||||||    
T  17143659 gtgtcctctagtcgtccctaatcacacgcc 17143688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 20622708 - 20622634
Alignment:
Q  29 tcacacgttgacatgtggtctaacttacaccgccttaaggctccgcctctgatggaacacgccaactcaagtgca 103  Q
    ||||||||| ||||||||  ||||||||||||| ||||||||||||  |||| | | ||||||||||||||||||    
T  20622708 tcacacgttaacatgtggcataacttacaccgctttaaggctccgcgcctgaggtagcacgccaactcaagtgca 20622634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 9800978 - 9801030
Alignment:
Q  132 cgaggatcaccatacaagtgtcctctaaccgttcctaatcacacgccccaaaa 184  Q
    ||||| ||||| |||| ||||||||||||||| |||||||||||||| |||||    
T  9800978 cgagggtcaccctacatgtgtcctctaaccgtccctaatcacacgccgcaaaa 9801030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 8122704 - 8122763
Alignment:
Q  29 tcacacgttgacatgtggtctaacttacaccgccttaaggctccgcctctgatggaacac 88  Q
    |||||| ||||||  || |||||||||||||||||||||||||| | ||||| |||||||    
T  8122704 tcacacattgacacatgatctaacttacaccgccttaaggctccacgtctgaaggaacac 8122763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 238
Target Start/End: Complemental strand, 25496109 - 25496030
Alignment:
Q  159 accgttcctaatcacacgccccaaaatccggaggtggttatcaacaacacgcgcctatatatgggtgtccttgcttcacc 238  Q
    |||||||||||||||||||| || || ||||||  |||||| | ||||  ||||||||||| |||||  |||||||||||    
T  25496109 accgttcctaatcacacgccgcataacccggagacggttatgatcaacgtgcgcctatataagggtgaacttgcttcacc 25496030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 236
Target Start/End: Complemental strand, 5860013 - 5859909
Alignment:
Q  132 cgaggatcaccatacaagtgtcctctaaccgttcctaatcacacgccccaaaatccggaggtggttatcaacaacacgcgcctatatatgggtgtccttg 231  Q
    ||||||||||  |||| ||||| | ||||||| ||||||||| |||| |||||||| |||| ||||||   |||| |||||||||||| ||||| |||||    
T  5860013 cgaggatcactctacacgtgtcatttaaccgtccctaatcactcgccgcaaaatccagaggcggttatttccaacgcgcgcctatataagggtgaccttg 5859914  T
Q  232 cttca 236  Q
    |||||    
T  5859913 cttca 5859909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 240
Target Start/End: Original strand, 17698195 - 17698286
Alignment:
Q  149 gtgtcctctaaccgttcctaatcacacgccccaaaatccggaggtggttatcaacaacacgcgcctatatatgggtgtccttgcttcaccct 240  Q
    ||||||| ||||||| |||||||||||||| | |||| || ||  ||||||   | || |||||||||||||||||| ||||||||||||||    
T  17698195 gtgtcctttaaccgtccctaatcacacgccgctaaattcgaagacggttatgctcgacgcgcgcctatatatgggtggccttgcttcaccct 17698286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 236
Target Start/End: Complemental strand, 18323149 - 18323037
Alignment:
Q  124 cccccgcacgaggatcaccatacaagtgtcctctaaccgttcctaatcacacgccccaaaatccggaggtggttatcaacaacacgcgcctatatatggg 223  Q
    |||||||||||||||||   |||  ||||||||||||| | |||||||||||||| | ||| |||||||  |||||   |||| |  ||||||||| |||    
T  18323149 cccccgcacgaggatcatgctacgtgtgtcctctaaccatccctaatcacacgccgcgaaacccggaggcagttattctcaactcttgcctatataaggg 18323050  T
Q  224 tgtccttgcttca 236  Q
    || ||||||||||    
T  18323049 tgaccttgcttca 18323037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 188
Target Start/End: Complemental strand, 13754970 - 13754899
Alignment:
Q  118 agcacgcccccgcacgaggatcaccatacaagtgtcctctaaccgttc-ctaatcacacgccccaaaatccg 188  Q
    |||||||| |||| ||| ||||||||| ||  | |||||||||||||| ||||||||||||| |||||||||    
T  13754970 agcacgcctccgcgcgacgatcaccattcacatttcctctaaccgttcactaatcacacgccgcaaaatccg 13754899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 240
Target Start/End: Complemental strand, 23269399 - 23269324
Alignment:
Q  165 cctaatcacacgccccaaaatccggaggtggttatcaacaacacgcgcctatatatgggtgtccttgcttcaccct 240  Q
    |||| ||||||||  |||||  |||||  |||||||  ||||||||||||||||||||||| | ||||||||||||    
T  23269399 cctattcacacgctgcaaaactcggagacggttatcctcaacacgcgcctatatatgggtgacattgcttcaccct 23269324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 30477848 - 30477794
Alignment:
Q  123 gcccccgcacgaggatcaccatacaagtgtcctctaaccgttcctaatcacacgc 177  Q
    |||||||||||||| ||||| |||| ||||||||||||  ||| |||||||||||    
T  30477848 gcccccgcacgaggttcaccctacatgtgtcctctaactattcttaatcacacgc 30477794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 177
Target Start/End: Original strand, 6927987 - 6928032
Alignment:
Q  132 cgaggatcaccatacaagtgtcctctaaccgttcctaatcacacgc 177  Q
    ||||||||||  |||| ||||||||| |||||||||||||||||||    
T  6927987 cgaggatcactctacacgtgtcctcttaccgttcctaatcacacgc 6928032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 21417033 - 21416961
Alignment:
Q  21 aagaccattcacacgttgacatgtggtctaacttacaccgccttaaggctccgcctctgatggaacacgccaac 94  Q
    ||||||| ||||||||| ||||||||  |||||| ||||||||||||||||||   |||| ||||||| |||||    
T  21417033 aagaccaatcacacgtt-acatgtggcataacttgcaccgccttaaggctccgtgcctgagggaacacaccaac 21416961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 26978057 - 26977986
Alignment:
Q  21 aagaccattcacacgttgacatgtggtctaacttacaccgccttaaggctccgcctctgatggaacacgcca 92  Q
    ||||||| ||||||| |||||||||| ||||||||||||||||||||||| |||  |||| | |||||||||    
T  26978057 aagaccaatcacacgctgacatgtggcctaacttacaccgccttaaggcttcgcgcctgaggaaacacgcca 26977986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 178
Target Start/End: Complemental strand, 22415085 - 22414927
Alignment:
Q  21 aagaccattcacacgttgacatgtggtctaa-cttacaccgccttaaggctccgcctctgatggaacacgccaactcaagtgcaccacgccacaccgtag 119  Q
    ||||||| ||||| ||||||| ||||  ||| |||||||| ||||||||||||||  |||| |||||||| || |||||||||||  ||||||||   ||    
T  22415085 aagaccaatcacatgttgacacgtggcataaacttacacctccttaaggctccgcacctgaaggaacacgtcagctcaagtgcactgcgccacacataag 22414986  T
Q  120 cacgcccccgcacgaggatcaccatacaagtgtcctctaaccgttcctaatcacacgcc 178  Q
    | | |||| ||  |||||||||| |||| ||||| |||||| || | |||||| |||||    
T  22414985 cgcacccctgcgtgaggatcaccttacatgtgtcatctaactgtccataatcatacgcc 22414927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 199
Target Start/End: Original strand, 2140846 - 2140909
Alignment:
Q  137 atcaccatacaagtgtcctctaaccg-ttcctaatcacacgccccaaaatccggaggtggttat 199  Q
    ||||||||||| |||||||||||||| ||||||||||||| || ||||| ||| | ||||||||    
T  2140846 atcaccatacacgtgtcctctaaccgtttcctaatcacacaccacaaaacccgaaagtggttat 2140909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 103
Target Start/End: Original strand, 8363 - 8445
Alignment:
Q  21 aagaccattcacacgttgacatgtggtctaacttacaccgccttaaggctccgcctctgatggaacacgccaactcaagtgca 103  Q
    ||||||| ||||||||| ||| ||||| |||| |||| ||||||||||||| |  || || ||||||||||| ||||||||||    
T  8363 aagaccaatcacacgttaacacgtggtataacctacatcgccttaaggctctgtgtcagagggaacacgccagctcaagtgca 8445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 134 - 240
Target Start/End: Original strand, 95705 - 95811
Alignment:
Q  134 aggatcaccatacaagtgtcctctaaccgttcctaatcacacgccccaaaatccggaggtggttatcaacaacacgcgcctatatatgggtgtccttgct 233  Q
    ||||||||  |||| ||||||||||||||| |||||||||||||| |||||  ||||||| | |||    ||| || ||||||||| ||||| | |||||    
T  95705 aggatcactctacatgtgtcctctaaccgtccctaatcacacgccgcaaaactcggaggtagatattccaaacgcgtgcctatataagggtgacgttgct 95804  T
Q  234 tcaccct 240  Q
    |||||||    
T  95805 tcaccct 95811  T

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Target: scaffold0023; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 111
Target Start/End: Original strand, 93395 - 93485
Alignment:
Q  21 aagaccattcacacgttgacatgtggtctaacttacaccgccttaaggctccgcctctgatggaacacgccaactcaagtgcaccacgcca 111  Q
    ||||||| ||| | ||||||| |||| |||||||||||| |||||| |||||||  |||| ||||||| ||| || || ||||||| ||||    
T  93395 aagaccaatcatatgttgacacgtggcctaacttacaccaccttaaagctccgcgcctgaaggaacacaccagcttaaatgcaccaagcca 93485  T

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Target: chr5 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 191
Target Start/End: Original strand, 32418268 - 32418438
Alignment:
Q  21 aagaccattcacacgttgacatgtggtctaacttacaccgccttaaggctccgcctctgatggaacacgccaactcaagtgcaccacgccacaccgtagc 120  Q
    ||||||| || |||||||||| |||   ||||||||||||||||||||||  |  | ||| | |||||| |||||  |||||| | || || || | |      
T  32418268 aagaccaatcgcacgttgacacgtgacataacttacaccgccttaaggctttgtgtatgaggaaacacgtcaacttgagtgcatcgcgtcatacaggaag 32418367  T
Q  121 acgcccccgcacgaggatcaccatacaagtgtcctctaaccgttcctaatcacacgccccaaaatccggag 191  Q
     ||||||||| ||||||||||| |||| |||||| |||||| | |||||||||||||| || || ||||||    
T  32418368 gcgcccccgcgcgaggatcaccctacacgtgtcccctaaccatccctaatcacacgccgcataacccggag 32418438  T

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Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 95
Target Start/End: Original strand, 19990868 - 19990932
Alignment:
Q  32 cacgttgacatgtggtctaa-cttacaccgccttaaggctccgcctctgatggaacacgccaact 95  Q
    ||||||||||||||| |||| ||| |||||||||||||||||||  |||| ||||||| ||||||    
T  19990868 cacgttgacatgtggcctaaacttgcaccgccttaaggctccgcgcctgaaggaacacaccaact 19990932  T

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Target: scaffold0360 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 240
Target Start/End: Complemental strand, 14117 - 14012
Alignment:
Q  135 ggatcaccatacaagtgtcctctaaccgttcctaatcacacgccccaaaatccggaggtggttatcaacaacacgcgcctatatatgggtgtccttgctt 234  Q
    ||||||||||||  |||||||||||| || ||||||||||| || ||||| | ||||| ||||||   |||  | | |||||||| |||||  |||||||    
T  14117 ggatcaccatacgcgtgtcctctaacggtccctaatcacacaccgcaaaacctggaggcggttattcccaatgcacacctatataagggtgatcttgctt 14018  T
Q  235 caccct 240  Q
    ||||||    
T  14017 caccct 14012  T

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Target: scaffold0126 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 176
Target Start/End: Original strand, 31655 - 31772
Alignment:
Q  59 cgccttaaggctccgcctctgatggaacacgccaactcaagtgcaccacgccacaccgtagcacgcccccgcacgaggatcaccatacaagtgtcctcta 158  Q
    |||||||||||| |||  ||||  || |||| ||||||||||||| | |||||||| | ||| | ||||| ||||||||||||| ||||  | || | ||    
T  31655 cgccttaaggcttcgcggctgaaagagcacgtcaactcaagtgcaacgcgccacacagaagcgcacccccacacgaggatcaccctacacttttcatata 31754  T
Q  159 accgttcctaatcacacg 176  Q
    |||||  |||||||||||    
T  31755 accgtctctaatcacacg 31772  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 240
Target Start/End: Complemental strand, 379879 - 379806
Alignment:
Q  167 taatcacacgccccaaaatccggaggtggttatcaacaacacgcgcctatatatgggtgtccttgcttcaccct 240  Q
    |||||||||||| || ||| | ||| ||||||| | ||||| ||||||||||| |||||  |||||||||||||    
T  379879 taatcacacgccgcataattcagagatggttatgaccaacatgcgcctatatacgggtgaacttgcttcaccct 379806  T

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Target: scaffold0101 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 156
Target Start/End: Original strand, 10620 - 10652
Alignment:
Q  124 cccccgcacgaggatcaccatacaagtgtcctc 156  Q
    |||||||||||||||||||||||| ||||||||    
T  10620 cccccgcacgaggatcaccatacacgtgtcctc 10652  T

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