View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11375_high_13 (Length: 520)

Name: NF11375_high_13
Description: NF11375
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11375_high_13
NF11375_high_13
[»] chr7 (25 HSPs)
chr7 (9-247)||(34875461-34875699)
chr7 (337-503)||(34875226-34875386)
chr7 (34-212)||(39007530-39007708)
chr7 (156-215)||(46346719-46346778)
chr7 (162-215)||(6797394-6797447)
chr7 (151-215)||(44141249-44141313)
chr7 (153-215)||(5757390-5757452)
chr7 (153-215)||(27335629-27335690)
chr7 (151-215)||(16933242-16933306)
chr7 (151-215)||(16938625-16938689)
chr7 (151-215)||(20000672-20000736)
chr7 (151-215)||(763701-763765)
chr7 (151-215)||(11732645-11732709)
chr7 (151-215)||(30884220-30884284)
chr7 (151-215)||(31660073-31660137)
chr7 (151-215)||(41911107-41911171)
chr7 (151-215)||(46358524-46358588)
chr7 (158-215)||(24359875-24359932)
chr7 (162-215)||(45402879-45402932)
chr7 (151-215)||(47340150-47340215)
chr7 (341-378)||(23709315-23709352)
chr7 (147-192)||(25778863-25778908)
chr7 (150-179)||(32090584-32090613)
chr7 (151-204)||(35736963-35737016)
chr7 (153-190)||(46024055-46024092)
[»] chr1 (35 HSPs)
chr1 (9-216)||(31529521-31529728)
chr1 (9-220)||(51801589-51801800)
chr1 (37-215)||(2741040-2741215)
chr1 (149-219)||(33097405-33097475)
chr1 (144-217)||(44688601-44688674)
chr1 (37-148)||(28323177-28323288)
chr1 (151-217)||(44260520-44260586)
chr1 (153-215)||(37639345-37639407)
chr1 (150-215)||(28323329-28323394)
chr1 (153-215)||(35198181-35198243)
chr1 (162-211)||(20372213-20372262)
chr1 (151-215)||(51420349-51420412)
chr1 (151-205)||(34369674-34369728)
chr1 (162-215)||(13590471-13590524)
chr1 (151-215)||(11421598-11421662)
chr1 (151-215)||(49936935-49936999)
chr1 (151-215)||(50351807-50351871)
chr1 (162-215)||(5077457-5077510)
chr1 (162-211)||(13673899-13673948)
chr1 (158-215)||(21256777-21256834)
chr1 (126-190)||(23921871-23921935)
chr1 (151-215)||(24635930-24635994)
chr1 (151-215)||(30788352-30788414)
chr1 (151-215)||(4097906-4097970)
chr1 (151-215)||(18618839-18618903)
chr1 (151-215)||(19897758-19897822)
chr1 (151-215)||(20434720-20434784)
chr1 (151-215)||(23175520-23175584)
chr1 (151-215)||(25889026-25889090)
chr1 (151-215)||(28375468-28375532)
chr1 (151-215)||(43452546-43452610)
chr1 (151-215)||(48762329-48762393)
chr1 (153-190)||(18056812-18056849)
chr1 (151-215)||(6314119-6314183)
chr1 (151-203)||(16975970-16976022)
[»] chr3 (32 HSPs)
chr3 (34-217)||(53594970-53595153)
chr3 (151-215)||(47728392-47728456)
chr3 (151-216)||(37319458-37319523)
chr3 (151-215)||(51682000-51682064)
chr3 (156-215)||(23699331-23699390)
chr3 (156-215)||(23717786-23717845)
chr3 (156-215)||(23736242-23736301)
chr3 (162-215)||(32232995-32233048)
chr3 (160-215)||(23755289-23755344)
chr3 (151-215)||(26662536-26662600)
chr3 (151-215)||(33414011-33414075)
chr3 (150-217)||(39195105-39195172)
chr3 (153-211)||(28299952-28300010)
chr3 (151-215)||(3475405-3475469)
chr3 (151-215)||(9106271-9106335)
chr3 (151-215)||(19284675-19284739)
chr3 (151-215)||(46237756-46237820)
chr3 (151-215)||(47335036-47335100)
chr3 (158-215)||(34563352-34563409)
chr3 (158-215)||(41192355-41192412)
chr3 (158-215)||(51846785-51846842)
chr3 (151-215)||(2941924-2941988)
chr3 (151-215)||(9595978-9596042)
chr3 (151-215)||(10986356-10986420)
chr3 (151-215)||(30947909-30947973)
chr3 (162-214)||(41568836-41568888)
chr3 (151-215)||(54379167-54379231)
chr3 (151-190)||(19385313-19385352)
chr3 (151-190)||(51362436-51362475)
chr3 (153-190)||(50754034-50754071)
chr3 (153-190)||(52987650-52987687)
chr3 (151-215)||(6097682-6097746)
[»] chr8 (31 HSPs)
chr8 (34-215)||(12355426-12355607)
chr8 (36-215)||(2522871-2523050)
chr8 (36-217)||(28698463-28698645)
chr8 (143-217)||(13526661-13526735)
chr8 (143-217)||(13616196-13616270)
chr8 (156-217)||(40247288-40247349)
chr8 (151-215)||(30413918-30413982)
chr8 (165-216)||(10443582-10443633)
chr8 (143-210)||(30651958-30652025)
chr8 (158-215)||(9852274-9852331)
chr8 (158-215)||(34648133-34648190)
chr8 (151-215)||(10237358-10237422)
chr8 (151-215)||(19784275-19784339)
chr8 (151-215)||(41099186-41099250)
chr8 (151-215)||(43690644-43690708)
chr8 (153-215)||(15181794-15181856)
chr8 (337-378)||(10650574-10650615)
chr8 (158-215)||(35302591-35302648)
chr8 (151-215)||(7857684-7857748)
chr8 (151-215)||(15227034-15227098)
chr8 (151-203)||(34633319-34633371)
chr8 (151-215)||(41451109-41451173)
chr8 (147-190)||(42433729-42433772)
chr8 (151-215)||(1671803-1671870)
chr8 (153-190)||(4836701-4836738)
chr8 (153-190)||(4842146-4842183)
chr8 (153-190)||(7614096-7614133)
chr8 (153-190)||(8550532-8550569)
chr8 (153-190)||(32987445-32987482)
chr8 (151-215)||(1150021-1150085)
chr8 (162-214)||(44509061-44509113)
[»] chr4 (35 HSPs)
chr4 (38-217)||(43852506-43852684)
chr4 (143-216)||(16298924-16298997)
chr4 (150-215)||(25574125-25574190)
chr4 (157-215)||(24686576-24686634)
chr4 (151-215)||(10472501-10472565)
chr4 (151-215)||(13635723-13635787)
chr4 (151-215)||(49492510-49492574)
chr4 (151-205)||(26578187-26578241)
chr4 (118-215)||(38010145-38010243)
chr4 (153-215)||(50563729-50563790)
chr4 (151-215)||(1621879-1621943)
chr4 (151-200)||(6386539-6386590)
chr4 (151-215)||(15051134-15051198)
chr4 (151-215)||(30597703-30597767)
chr4 (151-215)||(36011847-36011911)
chr4 (151-215)||(46672443-46672507)
chr4 (151-215)||(51921263-51921327)
chr4 (151-215)||(53441324-53441388)
chr4 (151-215)||(55765485-55765549)
chr4 (153-215)||(1729615-1729677)
chr4 (158-203)||(30357823-30357868)
chr4 (162-214)||(2848118-2848170)
chr4 (151-215)||(11785978-11786042)
chr4 (151-215)||(11798145-11798209)
chr4 (151-215)||(27865735-27865799)
chr4 (151-215)||(35291546-35291610)
chr4 (151-215)||(49426055-49426119)
chr4 (147-190)||(29826600-29826643)
chr4 (147-190)||(50643771-50643814)
chr4 (186-216)||(48740608-48740638)
chr4 (153-190)||(4168386-4168423)
chr4 (153-190)||(26447412-26447449)
chr4 (153-190)||(36621701-36621738)
chr4 (153-189)||(637883-637919)
chr4 (151-215)||(38244948-38245012)
[»] chr2 (22 HSPs)
chr2 (51-217)||(16141973-16142139)
chr2 (38-132)||(40853586-40853680)
chr2 (143-217)||(39548044-39548118)
chr2 (150-215)||(36636934-36636999)
chr2 (151-215)||(5098720-5098784)
chr2 (150-217)||(13081857-13081924)
chr2 (159-214)||(40853685-40853740)
chr2 (151-215)||(25995290-25995354)
chr2 (151-215)||(8149835-8149899)
chr2 (151-215)||(8154459-8154523)
chr2 (153-215)||(4281788-4281850)
chr2 (151-215)||(1292177-1292241)
chr2 (151-215)||(15016564-15016628)
chr2 (162-214)||(24024633-24024685)
chr2 (151-215)||(39355039-39355103)
chr2 (151-215)||(7487252-7487316)
chr2 (151-215)||(9143589-9143653)
chr2 (151-215)||(34464715-34464779)
chr2 (157-215)||(2263577-2263635)
chr2 (153-190)||(18298111-18298148)
chr2 (158-215)||(18762871-18762928)
chr2 (158-215)||(41346045-41346102)
[»] chr6 (13 HSPs)
chr6 (143-217)||(16968013-16968087)
chr6 (143-216)||(4338610-4338683)
chr6 (162-214)||(27079939-27079991)
chr6 (153-215)||(18611192-18611254)
chr6 (165-215)||(32556348-32556398)
chr6 (151-215)||(31216666-31216730)
chr6 (151-217)||(6900805-6900871)
chr6 (158-215)||(30908656-30908713)
chr6 (151-215)||(1449546-1449610)
chr6 (151-215)||(1536894-1536958)
chr6 (151-215)||(7089086-7089150)
chr6 (151-215)||(34870084-34870148)
chr6 (153-190)||(35119263-35119300)
[»] chr5 (21 HSPs)
chr5 (151-215)||(33868159-33868223)
chr5 (153-215)||(16668794-16668856)
chr5 (153-215)||(18465556-18465618)
chr5 (154-214)||(4674965-4675025)
chr5 (151-215)||(16552637-16552701)
chr5 (162-215)||(39056461-39056514)
chr5 (162-214)||(15913140-15913192)
chr5 (151-215)||(26637835-26637899)
chr5 (337-378)||(15024333-15024374)
chr5 (162-214)||(7183142-7183194)
chr5 (151-215)||(13552987-13553051)
chr5 (151-215)||(14940354-14940418)
chr5 (151-215)||(15416668-15416732)
chr5 (151-215)||(30783439-30783503)
chr5 (151-215)||(3884033-3884097)
chr5 (151-215)||(14394472-14394536)
chr5 (162-217)||(6054367-6054422)
chr5 (153-190)||(13362798-13362835)
chr5 (153-190)||(25017217-25017254)
chr5 (153-189)||(34329156-34329192)
chr5 (151-215)||(37456684-37456748)
[»] scaffold0006 (2 HSPs)
scaffold0006 (162-215)||(209330-209383)
scaffold0006 (162-211)||(171513-171562)
[»] scaffold0069 (1 HSPs)
scaffold0069 (162-211)||(51367-51416)
[»] scaffold0460 (1 HSPs)
scaffold0460 (162-211)||(1612-1661)
[»] scaffold0571 (1 HSPs)
scaffold0571 (151-215)||(674-738)
[»] scaffold0045 (1 HSPs)
scaffold0045 (151-215)||(33688-33752)
[»] scaffold0002 (1 HSPs)
scaffold0002 (165-215)||(450206-450256)
[»] scaffold0012 (1 HSPs)
scaffold0012 (162-215)||(119206-119259)
[»] scaffold0717 (1 HSPs)
scaffold0717 (162-214)||(7351-7403)
[»] scaffold0581 (1 HSPs)
scaffold0581 (151-215)||(8419-8483)
[»] scaffold0238 (1 HSPs)
scaffold0238 (151-190)||(25230-25269)


Alignment Details
Target: chr7 (Bit Score: 191; Significance: 1e-103; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 9 - 247
Target Start/End: Complemental strand, 34875699 - 34875461
Alignment:
Q  9 gagagaagaatgacaaagaagtaatgtcgtgaacatgtccgtataaatcacgttggagcggcgagcaagggtgagaatcatgtcggcatcggagctacaa 108  Q
    |||||||||| ||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||| |||||| |||||||||| |    
T  34875699 gagagaagaacgacaaagaagtaatgtcgtgaacctgtccggataaatcacgtcggagcggcgagcaagggtgagaatcacgtcggcgtcggagctacga 34875600  T
Q  109 tgagcttctgcgtgtgtgcgatcagatattgagagtgcgatcaaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataa 208  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||    
T  34875599 tgagcttctgcgtgtgtgcaatcagatattgagagtgcgatcaaatctgatggttgtgaagtgtttatgcagggtgcataaggaaatggcttatgcataa 34875500  T
Q  209 taactttgctctcatttagacacccacacacaaaagcac 247  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  34875499 taactttgccctcatttagacacccacacacaaaagcac 34875461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 337 - 503
Target Start/End: Complemental strand, 34875386 - 34875226
Alignment:
Q  337 aaaccaagtgctcaaacccttgtacccaattaagtattttccgagatgaacatcatgttttcttctttccgtacgtaggggaaggggctgcatatataaa 436  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||      |||||||||||||    
T  34875386 aaaccaagtgctcaaacccttctacccaattaagtattttccgggatgaacatcatgttttcttctttccgtacgtagggg------ctgcatatataaa 34875293  T
Q  437 tatcattacgatcatgtctcattaattagacgtgaatgatctactaatatgtaaccaacctaccatg 503  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  34875292 tatcattacgatcatgtctcattaattagacgtgaatgatctactaatatgcaaccaacctaccatg 34875226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 34 - 212
Target Start/End: Original strand, 39007530 - 39007708
Alignment:
Q  34 gtcgtgaacatgtccgtataaatcacgttggagcggcgagcaagggtgagaatcatgtcggcatcggagctacaatgagcttctgcgtgtgtgcgatcag 133  Q
    ||||||||| || ||| |||||||||||  ||||||||||||||||||||||||| |||||  |||||||||| ||||||||||||||||||||||||||    
T  39007530 gtcgtgaacctggccggataaatcacgtcagagcggcgagcaagggtgagaatcacgtcggtgtcggagctacgatgagcttctgcgtgtgtgcgatcag 39007629  T
Q  134 atattgagagtgcgatcaaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataac 212  Q
    ||  ||| ||||| ||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  39007630 attgtgaaagtgcaatcaaatatgatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataac 39007708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 156 - 215
Target Start/End: Original strand, 46346719 - 46346778
Alignment:
Q  156 tgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  46346719 tgatggttgtgaagtgtttatacaggatgcataagaaaatgacttatgcataataacttt 46346778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 162 - 215
Target Start/End: Original strand, 6797394 - 6797447
Alignment:
Q  162 ttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6797394 ttgtgaagtgtttatgcaggatgcataaggaaatgacttatgcataataacttt 6797447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 44141249 - 44141313
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||    
T  44141249 aaatcagatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcatgataacttt 44141313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 153 - 215
Target Start/End: Complemental strand, 5757452 - 5757390
Alignment:
Q  153 atctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||||||||||||| | |||||||| ||||| ||||||||||||||||||    
T  5757452 atctgatggttgtgaagtgtttatgcacggtgcataaggaaatgtcttatgcataataacttt 5757390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 153 - 215
Target Start/End: Original strand, 27335629 - 27335690
Alignment:
Q  153 atctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||    
T  27335629 atctgatggttgtgaagtgtttatgcagg-tgcataagaaaatgacttatttataataacttt 27335690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 16933242 - 16933306
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | |||||||| ||||||||||||||  ||||||||    
T  16933242 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttt 16933306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 16938625 - 16938689
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | |||||||| ||||||||||||||  ||||||||    
T  16938625 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttt 16938689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 20000672 - 20000736
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | |||||||| ||||||||||||||  ||||||||    
T  20000672 aaatctgatggttgtgatgtgtttatgcacggtgcataagtaaatgacttatgcaccataacttt 20000736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 763765 - 763701
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | |||||||| ||||| ||||||||  ||||||||    
T  763765 aaatctgatggttgtgacgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 763701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 11732645 - 11732709
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||||| ||||||||||||||||||||||   |||||||||||||| ||||||||  ||||||||    
T  11732645 aaatctaatggttgtgaagtgtttatgcacagtgcataagaaaatggcttatgcaccataacttt 11732709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 30884220 - 30884284
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | |||||||| |||| |||||||||  ||||||||    
T  30884220 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 30884284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 31660137 - 31660073
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | |||||||| |||| |||||||||  ||||||||    
T  31660137 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 31660073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 41911107 - 41911171
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | |||||||| |||| |||||||||  ||||||||    
T  41911107 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 41911171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 46358588 - 46358524
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | |||||||| |||| |||||||||  ||||||||    
T  46358588 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 46358524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 24359932 - 24359875
Alignment:
Q  158 atggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||||||||||||||| ||||| | |||||||| ||||||||||||||  ||||||||    
T  24359932 atggttgtgaagtgttgatgcacggtgcataaggaaatgacttatgcaccataacttt 24359875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 162 - 215
Target Start/End: Original strand, 45402879 - 45402932
Alignment:
Q  162 ttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||| |||||||||||| || |||||||| |||| |||||||||||||||||||    
T  45402879 ttgtaaagtgtttatgctgggtgcataaggaaataacttatgcataataacttt 45402932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 47340215 - 47340150
Alignment:
Q  151 aaatctgatggttgtgaagtgttt-atgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| |||||| ||||| | ||||||||||||| |||||||||  ||||||||    
T  47340215 aaatctgatggttgtgatgtgttttatgcacggtgcataagaaaataacttatgcaccataacttt 47340150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 378
Target Start/End: Complemental strand, 23709352 - 23709315
Alignment:
Q  341 caagtgctcaaacccttgtacccaattaagtattttcc 378  Q
    ||||||||||||||||||| ||||||||| ||||||||    
T  23709352 caagtgctcaaacccttgtgcccaattaaatattttcc 23709315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 192
Target Start/End: Complemental strand, 25778908 - 25778863
Alignment:
Q  147 gatcaaatctgatggttgtgaagtgtttatgcaggatgcataagaa 192  Q
    ||||||||||||||||||||||||| |||||||   ||||||||||    
T  25778908 gatcaaatctgatggttgtgaagtgcttatgcacagtgcataagaa 25778863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 179
Target Start/End: Original strand, 32090584 - 32090613
Alignment:
Q  150 caaatctgatggttgtgaagtgtttatgca 179  Q
    ||||||||||||||||||||||||||||||    
T  32090584 caaatctgatggttgtgaagtgtttatgca 32090613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 204
Target Start/End: Complemental strand, 35737016 - 35736963
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgc 204  Q
    |||| |||||||||||| ||||||||||| | |||||||| |||| ||||||||    
T  35737016 aaatatgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgc 35736963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 190
Target Start/End: Complemental strand, 46024092 - 46024055
Alignment:
Q  153 atctgatggttgtgaagtgtttatgcaggatgcataag 190  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  46024092 atctgatggttgtgaagtgtttatgcacggtgcataag 46024055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 144; Significance: 2e-75; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 9 - 216
Target Start/End: Original strand, 31529521 - 31529728
Alignment:
Q  9 gagagaagaatgacaaagaagtaatgtcgtgaacatgtccgtataaatcacgttggagcggcgagcaagggtgagaatcatgtcggcatcggagctacaa 108  Q
    |||||||||| ||||||||||||||||||||||| || ||| ||||||||||| ||||||||||||||||||||||||||||||| | |||||||||| |    
T  31529521 gagagaagaacgacaaagaagtaatgtcgtgaacctggccggataaatcacgtcggagcggcgagcaagggtgagaatcatgtcgacgtcggagctacga 31529620  T
Q  109 tgagcttctgcgtgtgtgcgatcagatattgagagtgcgatcaaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataa 208  Q
    |||| || |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||| |||||||||||    
T  31529621 tgagtttatgcgtgtgtgcgatcagattgtgagagtgcgatcaaatctgatggttgtgaagtgtttatgcatggtgcataaggaaatggcttatgcataa 31529720  T
Q  209 taactttg 216  Q
    ||||||||    
T  31529721 taactttg 31529728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 9 - 220
Target Start/End: Original strand, 51801589 - 51801800
Alignment:
Q  9 gagagaagaatgacaaagaagtaatgtcgtgaacatgtccgtataaatcacgttggagcggcgagcaagggtgagaatcatgtcggcatcggagctacaa 108  Q
    |||||||||| |||||| |||||||||||||||| ||  || ||||||||||| || || | |||||||||||||||||| |||| | |||||||||| |    
T  51801589 gagagaagaacgacaaataagtaatgtcgtgaacctggtcggataaatcacgtcggtgcagtgagcaagggtgagaatcacgtcgccgtcggagctacga 51801688  T
Q  109 tgagcttctgcgtgtgtgcgatcagatattgagagtgcgatcaaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataa 208  Q
    ||||||||||||||||||||||||||   |||||| |||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  51801689 tgagcttctgcgtgtgtgcgatcagaatgtgagagcgcgatcaagtctgatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataa 51801788  T
Q  209 taactttgctct 220  Q
    ||||||||||||    
T  51801789 taactttgctct 51801800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 37 - 215
Target Start/End: Complemental strand, 2741215 - 2741040
Alignment:
Q  37 gtgaacatgtccgtataaatcacgttggagcggcgagcaagggtgagaatcatgtcggcatcggagctacaatgagcttctgcgtgtgtgcgatcagata 136  Q
    |||||| || ||| ||||||||||| |||||||||||||||| ||||||||| |||||| |||||||||| ||||||||||||||||||||||||||||     
T  2741215 gtgaacctggccggataaatcacgtcggagcggcgagcaaggatgagaatcacgtcggcgtcggagctacgatgagcttctgcgtgtgtgcgatcagatt 2741116  T
Q  137 ttgagagtgcgatcaaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
     ||||||||||   |||||| ||| ||||||| |||||||||||  | |||||  ||||||||||||||||||||||||    
T  2741115 gtgagagtgcg---aaatctaatgattgtgaaatgtttatgcagagtacataaagaaatgacttatgcataataacttt 2741040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 33097475 - 33097405
Alignment:
Q  149 tcaaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataactttgctc 219  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  33097475 tcaaatctgatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataactttgctc 33097405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 44688601 - 44688674
Alignment:
Q  144 tgcgatcaaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataactttgc 217  Q
    |||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||| ||||||||||    
T  44688601 tgcgatcaaatctgatggttgtgaagtgtttatgcagcgtgcataaggaaatgacttatgcatgataactttgc 44688674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 37 - 148
Target Start/End: Original strand, 28323177 - 28323288
Alignment:
Q  37 gtgaacatgtccgtataaatcacgttggagcggcgagcaagggtgagaatcatgtcggcatcggagctacaatgagcttctgcgtgtgtgcgatcagata 136  Q
    |||||| || ||| ||||||||||| | |||||||||||||||||| ||||| |||||| || ||||||| |||||||||||| |||||| ||||||||     
T  28323177 gtgaacctggccggataaatcacgtcgaagcggcgagcaagggtgaaaatcacgtcggcgtcagagctacgatgagcttctgcatgtgtgtgatcagatt 28323276  T
Q  137 ttgagagtgcga 148  Q
     |||||||||||    
T  28323277 gtgagagtgcga 28323288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 151 - 217
Target Start/End: Complemental strand, 44260586 - 44260520
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataactttgc 217  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||    
T  44260586 aaatctgatggttgtgaagtgtttatgcagggtgcataaggaaatgacttacgcataataactttgc 44260520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 153 - 215
Target Start/End: Complemental strand, 37639407 - 37639345
Alignment:
Q  153 atctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||    
T  37639407 atctgatggttgtgaagtgtttatgcagggtgcataaggaaatgtcttatgcataataacttt 37639345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 150 - 215
Target Start/End: Original strand, 28323329 - 28323394
Alignment:
Q  150 caaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| |||||||||| ||| ||||||| |||||||||||||||||||||||||    
T  28323329 caaatctgatggttgtgtagtgtttatggagggtgcataaaaaaatgacttatgcataataacttt 28323394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 153 - 215
Target Start/End: Original strand, 35198181 - 35198243
Alignment:
Q  153 atctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||| ||||||||||||||||||| |||||||| ||||| ||||||||||||||||||    
T  35198181 atctgatggctgtgaagtgtttatgcagggtgcataaggaaatgtcttatgcataataacttt 35198243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 20372262 - 20372213
Alignment:
Q  162 ttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataa 211  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20372262 ttgtgaagtgtttatgcagggtgcataagaaaatgacttatgcataataa 20372213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 51420412 - 51420349
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||||||||||||||||| ||||||||||||||||||||  || |||||||||||||||||||||    
T  51420412 aaatctgatggttgtgaa-tgtttatgcaggatgcataaagaattgacttatgcataataacttt 51420349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 151 - 205
Target Start/End: Complemental strand, 34369728 - 34369674
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgca 205  Q
    ||||||||||||||||||||||||||||| | |||||||||||||| ||||||||    
T  34369728 aaatctgatggttgtgaagtgtttatgcacggtgcataagaaaatggcttatgca 34369674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 162 - 215
Target Start/End: Complemental strand, 13590524 - 13590471
Alignment:
Q  162 ttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||| ||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  13590524 ttgtaaagtgtttatgcagggtgcataaggaaatgacttatgcataataacttt 13590471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 11421662 - 11421598
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||||||||||||||| | |||||||| |||||| |||||||  ||||||||    
T  11421662 aaatctgatggttgtgaagtgtttatgcacggtgcataaggaaatgatttatgcaccataacttt 11421598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 49936935 - 49936999
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | |||||||| ||||||||||||||  ||||||||    
T  49936935 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttt 49936999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 50351871 - 50351807
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | |||||||| ||||||||||||||  ||||||||    
T  50351871 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttt 50351807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 162 - 215
Target Start/End: Original strand, 5077457 - 5077510
Alignment:
Q  162 ttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||||||||| |||||||||  ||||||| ||||||||||||||||||||||||    
T  5077457 ttgtgaagtgcttatgcagggcgcataaggaaatgacttatgcataataacttt 5077510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 13673948 - 13673899
Alignment:
Q  162 ttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataa 211  Q
    ||||||||||||||| |||| |||||||| ||||||||||||||||||||    
T  13673948 ttgtgaagtgtttatacagggtgcataaggaaatgacttatgcataataa 13673899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 21256777 - 21256834
Alignment:
Q  158 atggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||||||||||||||||||||| | |||||||||||||| ||||||||  ||||||||    
T  21256777 atggttgtgaagtgtttatgcacggtgcataagaaaatggcttatgcaccataacttt 21256834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 126 - 190
Target Start/End: Original strand, 23921871 - 23921935
Alignment:
Q  126 gcgatcagatattgagagtgcgatcaaatctgatggttgtgaagtgtttatgcaggatgcataag 190  Q
    ||||||||||  | ||||||| |||||||||||||||| ||||||| ||||||| ||||||||||    
T  23921871 gcgatcagattgtaagagtgcaatcaaatctgatggttatgaagtgcttatgcacgatgcataag 23921935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 24635994 - 24635930
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | |||||||| |||| |||||||||  ||||||||    
T  24635994 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 24635930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 30788414 - 30788352
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||| ||||||||||||| |||  ||||||  |||||||| ||||||||||||||||||||||||    
T  30788414 aaatatgatggttgtgaaatgt--atgcagactgcataaggaaatgacttatgcataataacttt 30788352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 4097906 - 4097970
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||| |||||||||||||||||||||||| | |||||||| ||||  ||||||||  ||||||||    
T  4097906 aaatttgatggttgtgaagtgtttatgcacggtgcataaggaaatagcttatgcaccataacttt 4097970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 18618903 - 18618839
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | |||||||| |||| | |||||||  ||||||||    
T  18618903 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataatttatgcaccataacttt 18618839  T

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Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 19897758 - 19897822
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||||||||||||||||  |||||||||| | |||||||| |||| |||||||||  ||||||||    
T  19897758 aaatctgatggttgtgatatgtttatgcacggtgcataaggaaataacttatgcaccataacttt 19897822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 20434720 - 20434784
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||||| |||||||||| ||||||||||| | |||||||| ||||| ||||||||  ||||||||    
T  20434720 aaatctaatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 20434784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 23175520 - 23175584
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||| |||||||||||||||||||||||| |  ||||||| ||||| ||||||||  ||||||||    
T  23175520 aaatttgatggttgtgaagtgtttatgcacggcgcataaggaaatggcttatgcaccataacttt 23175584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 25889026 - 25889090
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | |||||||| ||||  ||||||||  ||||||||    
T  25889026 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatagcttatgcaccataacttt 25889090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 28375532 - 28375468
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | |||||||  |||| |||||||||  ||||||||    
T  28375532 aaatctgatggttgtgatgtgtttatgcacggtgcataaagaaataacttatgcaccataacttt 28375468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 43452610 - 43452546
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||| ||||||| ||||||||||| | |||||||| |||| |||||||||  ||||||||    
T  43452610 aaatctgatagttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 43452546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 48762329 - 48762393
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||||| |||||||||| ||||||||||| | |||||||| |||| |||||||||  ||||||||    
T  48762329 aaatctaatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 48762393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 190
Target Start/End: Complemental strand, 18056849 - 18056812
Alignment:
Q  153 atctgatggttgtgaagtgtttatgcaggatgcataag 190  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  18056849 atctgatggttgtgaagtgtttatgcacggtgcataag 18056812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 6314183 - 6314119
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||| |||||| ||||| ||||||||||| | |||||||| ||||| ||||||||  ||||||||    
T  6314183 aaatttgatggctgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 6314119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 151 - 203
Target Start/End: Complemental strand, 16976022 - 16975970
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatg 203  Q
    ||||||||||||||||| |||||||| || | |||||||| |||| |||||||    
T  16976022 aaatctgatggttgtgatgtgtttatacacggtgcataaggaaataacttatg 16975970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 136; Significance: 1e-70; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 34 - 217
Target Start/End: Complemental strand, 53595153 - 53594970
Alignment:
Q  34 gtcgtgaacatgtccgtataaatcacgttggagcggcgagcaagggtgagaatcatgtcggcatcggagctacaatgagcttctgcgtgtgtgcgatcag 133  Q
    ||||||||| || ||| ||||||||||| |||||||||||||||||||||||||| |||||| |||||||||| || |||||||||||||||||||||||    
T  53595153 gtcgtgaacctggccggataaatcacgtcggagcggcgagcaagggtgagaatcacgtcggcgtcggagctacgattagcttctgcgtgtgtgcgatcag 53595054  T
Q  134 atattgagagtgcgatcaaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataactttgc 217  Q
    ||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  53595053 attgtgagagtgcgatcaaatctgatggttgtgaagtgtttatgcagggtgcataagaaaatggcttatgcataataactttgc 53594970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 47728456 - 47728392
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  47728456 aaatctgatggttgtgaagtgtttatgcagggtgcataagaaaatgacttatgcataataacttt 47728392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 37319458 - 37319523
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataactttg 216  Q
    ||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  37319458 aaatctgatgaatgtgaagtgtttatgcagggtgcataagaaaatgacttatgcataataactttg 37319523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 51682000 - 51682064
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  51682000 aaatctgatggttgcgaagtgtttatgcagggtgcataaggaaatgacttatgcataataacttt 51682064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 156 - 215
Target Start/End: Complemental strand, 23699390 - 23699331
Alignment:
Q  156 tgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||    
T  23699390 tgatggttgtgaagtgtttatgcagggtgtataagaaaatgtcttatgcataataacttt 23699331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 156 - 215
Target Start/End: Complemental strand, 23717845 - 23717786
Alignment:
Q  156 tgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||    
T  23717845 tgatggttgtgaagtgtttatgcagggtgtataagaaaatgtcttatgcataataacttt 23717786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 156 - 215
Target Start/End: Complemental strand, 23736301 - 23736242
Alignment:
Q  156 tgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||    
T  23736301 tgatggttgtgaagtgtttatgcagggtgtataagaaaatgtcttatgcataataacttt 23736242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 162 - 215
Target Start/End: Complemental strand, 32233048 - 32232995
Alignment:
Q  162 ttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  32233048 ttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataacttt 32232995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 160 - 215
Target Start/End: Complemental strand, 23755344 - 23755289
Alignment:
Q  160 ggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||    
T  23755344 ggttgtgaagtgtttatgcagggtgcataaggaaatgtcttatgcataataacttt 23755289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 26662536 - 26662600
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | |||||||| ||||| |||||||| |||||||||    
T  26662536 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcacaataacttt 26662600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 33414011 - 33414075
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | |||||||| ||||||||||||||  ||||||||    
T  33414011 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttt 33414075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 150 - 217
Target Start/End: Original strand, 39195105 - 39195172
Alignment:
Q  150 caaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataactttgc 217  Q
    ||||| |||||||| | ||||||| ||||||| ||||| || ||||||||||||||||||||||||||    
T  39195105 caaatttgatggttataaagtgttcatgcagggtgcatgaggaaatgacttatgcataataactttgc 39195172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 28299952 - 28300010
Alignment:
Q  153 atctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataa 211  Q
    ||||||| ||||||||||||||||||| | | |||||| ||||||||||||||||||||    
T  28299952 atctgatagttgtgaagtgtttatgcatggtacataaggaaatgacttatgcataataa 28300010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 3475405 - 3475469
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | |||||||| |||| |||||||||  ||||||||    
T  3475405 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 3475469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 9106335 - 9106271
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||| | ||||||||||| | |||||||| ||||||||||||||  ||||||||    
T  9106335 aaatctgatggttgtaatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttt 9106271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 19284739 - 19284675
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | |||||||| |||| |||||||||  ||||||||    
T  19284739 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 19284675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 46237756 - 46237820
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | |||||||| |||| |||||||||  ||||||||    
T  46237756 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 46237820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 47335100 - 47335036
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | |||||||| |||| |||||||||  ||||||||    
T  47335100 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 47335036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 34563352 - 34563409
Alignment:
Q  158 atggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||| |||||||||| | |||||||||||||| ||||||||  ||||||||    
T  34563352 atggttgtgaaatgtttatgcacggtgcataagaaaatggcttatgcaccataacttt 34563409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 41192355 - 41192412
Alignment:
Q  158 atggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||||||||||||||||||| | | |||||||| ||||||||||||||  ||||||||    
T  41192355 atggttgtgaagtgtttatgtacggtgcataaggaaatgacttatgcaccataacttt 41192412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 51846785 - 51846842
Alignment:
Q  158 atggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||||||||||||||||||||| | |||||||| ||||| ||||||||  ||||||||    
T  51846785 atggttgtgaagtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 51846842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 2941924 - 2941988
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | | |||||| |||| |||||||||  ||||||||    
T  2941924 aaatctgatggttgtgatgtgtttatgcacggtacataaggaaataacttatgcaccataacttt 2941988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 9595978 - 9596042
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | |||||||| ||||  ||||||||  ||||||||    
T  9595978 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatagcttatgcaccataacttt 9596042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 10986420 - 10986356
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||| ||| ||||||||||| | |||||||| |||| |||||| ||| ||||||||    
T  10986420 aaatctgatggttatgatgtgtttatgcacggtgcataaggaaataacttatacatcataacttt 10986356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 30947909 - 30947973
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||| ||||| |||||| ||||||||||| | |||||||| ||||||||||||||  ||||||||    
T  30947909 aaatttgatgattgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttt 30947973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 214
Target Start/End: Complemental strand, 41568888 - 41568836
Alignment:
Q  162 ttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataactt 214  Q
    ||||||||| |||||||| | |||||||| || ||||||||||||||||||||    
T  41568888 ttgtgaagtatttatgcatggtgcataaggaattgacttatgcataataactt 41568836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 54379231 - 54379167
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||| |||||||||||| ||||||||||| | |||||||| |||| |||||||||  ||||||||    
T  54379231 aaatatgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 54379167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 151 - 190
Target Start/End: Original strand, 19385313 - 19385352
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataag 190  Q
    ||||||||||||||||||||||||||||| | ||||||||    
T  19385313 aaatctgatggttgtgaagtgtttatgcacggtgcataag 19385352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 151 - 190
Target Start/End: Original strand, 51362436 - 51362475
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataag 190  Q
    ||||||||||||||||||||||||||||| | ||||||||    
T  51362436 aaatctgatggttgtgaagtgtttatgcacggtgcataag 51362475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 190
Target Start/End: Complemental strand, 50754071 - 50754034
Alignment:
Q  153 atctgatggttgtgaagtgtttatgcaggatgcataag 190  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  50754071 atctgatggttgtgaagtgtttatgcacggtgcataag 50754034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 190
Target Start/End: Original strand, 52987650 - 52987687
Alignment:
Q  153 atctgatggttgtgaagtgtttatgcaggatgcataag 190  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  52987650 atctgatggttgtgaagtgtttatgcacggtgcataag 52987687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 6097682 - 6097746
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||| ||| ||| ||||||||||| | |||||||| |||| |||||||||  ||||||||    
T  6097682 aaatctgatagttatgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 6097746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 114; Significance: 1e-57; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 34 - 215
Target Start/End: Complemental strand, 12355607 - 12355426
Alignment:
Q  34 gtcgtgaacatgtccgtataaatcacgttggagcggcgagcaagggtgagaatcatgtcggcatcggagctacaatgagcttctgcgtgtgtgcgatcag 133  Q
    ||||||||| ||  || ||||||||||| |||||||||||||||||||||||||| |||||    |||||||| ||||||||||||||||||||||||||    
T  12355607 gtcgtgaacctggacggataaatcacgtcggagcggcgagcaagggtgagaatcacgtcggtgatggagctacgatgagcttctgcgtgtgtgcgatcag 12355508  T
Q  134 atattgagagtgcgatcaaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||  |||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  12355507 attgtgagagtgcgatcagatctaatggttgtgaagtgtttatgcagggtgcataagaaaatgacttatgcgtaataacttt 12355426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 36 - 215
Target Start/End: Complemental strand, 2523050 - 2522871
Alignment:
Q  36 cgtgaacatgtccgtataaatcacgttggagcggcgagcaagggtgagaatcatgtcggcatcggagctacaatgagcttctgcgtgtgtgcgatcagat 135  Q
    ||||||| || ||| || |||||||  |||||||||||||||||||||||||| | |||| |||||||||| ||||||||||||||||||||||||||||    
T  2523050 cgtgaacctggccggattaatcacgccggagcggcgagcaagggtgagaatcacgccggcgtcggagctacgatgagcttctgcgtgtgtgcgatcagat 2522951  T
Q  136 attgagagtgcgatcaaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
      |||||||||||||||||||  || |||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  2522950 tgtgagagtgcgatcaaatctattgattgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataacttt 2522871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 36 - 217
Target Start/End: Original strand, 28698463 - 28698645
Alignment:
Q  36 cgtgaacatgtccgtataaatcacgttggagcggcgagcaagggtgagaatcatgtcggcatcggagctacaatgagcttctgcgtgtgtgcgatcagat 135  Q
    ||||||| || ||| ||||||||||| |||||||||||||||||||||||||| |||  | || ||||||| |||||||||||| |||||||||||| ||    
T  28698463 cgtgaacctggccggataaatcacgtcggagcggcgagcaagggtgagaatcacgtcaacgtcagagctacgatgagcttctgcatgtgtgcgatcaaat 28698562  T
Q  136 attgagagtgcgatcaaatctgatggttgtgaagtgttt-atgcaggatgcataagaaaatgacttatgcataataactttgc 217  Q
      ||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||| ||||||||||||||||||||    
T  28698563 tgtgagagtgcgatcaaatctgatggttgtgaaatgtttaatgcagggtgcataagaaaatggcttatgcataataactttgc 28698645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 13526661 - 13526735
Alignment:
Q  143 gtgcgatcaaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataactttgc 217  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||| ||||| ||||||||||||||||||||    
T  13526661 gtgcgatcaaatctgatggttgtgaagtgtttatgcagagtacataaggaaatggcttatgcataataactttgc 13526735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 13616196 - 13616270
Alignment:
Q  143 gtgcgatcaaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataactttgc 217  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||| ||||| ||||||||||||||||||||    
T  13616196 gtgcgatcaaatctgatggttgtgaagtgtttatgcagagtacataaggaaatggcttatgcataataactttgc 13616270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 156 - 217
Target Start/End: Original strand, 40247288 - 40247349
Alignment:
Q  156 tgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataactttgc 217  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  40247288 tgatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataactttgc 40247349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 30413982 - 30413918
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | |||||||| ||||||||||||||  ||||||||    
T  30413982 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcagcataacttt 30413918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 10443582 - 10443633
Alignment:
Q  165 tgaagtgtttatgcaggatgcataagaaaatgacttatgcataataactttg 216  Q
    ||||||||||||||||| |||||||| ||||| |||||||||||||||||||    
T  10443582 tgaagtgtttatgcagggtgcataaggaaatggcttatgcataataactttg 10443633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 30652025 - 30651958
Alignment:
Q  143 gtgcgatcaaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataata 210  Q
    |||||||||||| || ||||||||||||||||||||||| |||||||| ||||   ||||||||||||    
T  30652025 gtgcgatcaaatttgctggttgtgaagtgtttatgcagggtgcataaggaaatagattatgcataata 30651958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 9852331 - 9852274
Alignment:
Q  158 atggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||||||||||||||||||||| | |||||||| ||||||||||||||  ||||||||    
T  9852331 atggttgtgaagtgtttatgcacggtgcataaggaaatgacttatgcaccataacttt 9852274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 34648133 - 34648190
Alignment:
Q  158 atggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||||||||||||||||||||| | |||||||| ||||||||||||||  ||||||||    
T  34648133 atggttgtgaagtgtttatgcacggtgcataaggaaatgacttatgcaccataacttt 34648190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 10237422 - 10237358
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | |||||||| |||| |||||||||  ||||||||    
T  10237422 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 10237358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 19784339 - 19784275
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | |||||||| ||||| ||||||||  ||||||||    
T  19784339 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 19784275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 41099250 - 41099186
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | |||||||| |||| |||||||||  ||||||||    
T  41099250 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 41099186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 43690708 - 43690644
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | |||||||| |||| |||||||||  ||||||||    
T  43690708 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 43690644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 215
Target Start/End: Complemental strand, 15181856 - 15181794
Alignment:
Q  153 atctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||||||| |||||||||||||||||||| |||||||| |||    |||||||||||||||||    
T  15181856 atctgatgcttgtgaagtgtttatgcagggtgcataaggaaacatattatgcataataacttt 15181794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 337 - 378
Target Start/End: Original strand, 10650574 - 10650615
Alignment:
Q  337 aaaccaagtgctcaaacccttgtacccaattaagtattttcc 378  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  10650574 aaaccaagtgctcaaaaccttgtgcccaattaagtattttcc 10650615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 35302591 - 35302648
Alignment:
Q  158 atggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||||||||||||||||||||| | |||||||||||||| | ||||||  ||||||||    
T  35302591 atggttgtgaagtgtttatgcacggtgcataagaaaatgtcctatgcaccataacttt 35302648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 7857748 - 7857684
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||||||||| |||||| ||||||||||| |  ||||||||||||| ||||||||  ||||||||    
T  7857748 aaatctgatgattgtgatgtgtttatgcacggcgcataagaaaatggcttatgcaccataacttt 7857684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 15227098 - 15227034
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||| | ||||||||||| | |||||||| |||| |||||||||  ||||||||    
T  15227098 aaatctgatggttgtaatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 15227034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 203
Target Start/End: Original strand, 34633319 - 34633371
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatg 203  Q
    ||||||||||||||||| ||||||||||| | |||||||| |||| |||||||    
T  34633319 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatg 34633371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 41451173 - 41451109
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||||||||| |||||| ||||||||||| | |||||||| ||||| ||||||||  ||||||||    
T  41451173 aaatctgatgattgtgacgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 41451109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 190
Target Start/End: Complemental strand, 42433772 - 42433729
Alignment:
Q  147 gatcaaatctgatggttgtgaagtgtttatgcaggatgcataag 190  Q
    ||||||||||||||||||||||||| ||||||| | ||||||||    
T  42433772 gatcaaatctgatggttgtgaagtgcttatgcacggtgcataag 42433729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 1671870 - 1671803
Alignment:
Q  151 aaatctgatggttgtgaagtg---tttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||||||||| ||||||||||   |||| ||| | ||||||||||||||  |||||||||||||||||    
T  1671870 aaatctgatgattgtgaagtgatgtttaagcatggtgcataagaaaatgttttatgcataataacttt 1671803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 190
Target Start/End: Original strand, 4836701 - 4836738
Alignment:
Q  153 atctgatggttgtgaagtgtttatgcaggatgcataag 190  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  4836701 atctgatggttgtgaagtgtttatgcacggtgcataag 4836738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 190
Target Start/End: Original strand, 4842146 - 4842183
Alignment:
Q  153 atctgatggttgtgaagtgtttatgcaggatgcataag 190  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  4842146 atctgatggttgtgaagtgtttatgcacggtgcataag 4842183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 190
Target Start/End: Complemental strand, 7614133 - 7614096
Alignment:
Q  153 atctgatggttgtgaagtgtttatgcaggatgcataag 190  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  7614133 atctgatggttgtgaagtgtttatgcatggtgcataag 7614096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 190
Target Start/End: Complemental strand, 8550569 - 8550532
Alignment:
Q  153 atctgatggttgtgaagtgtttatgcaggatgcataag 190  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  8550569 atctgatggttgtgaagtgtttatgcacggtgcataag 8550532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 190
Target Start/End: Original strand, 32987445 - 32987482
Alignment:
Q  153 atctgatggttgtgaagtgtttatgcaggatgcataag 190  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  32987445 atctgatggttgtgaagtgtttatgcacggtgcataag 32987482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 1150021 - 1150085
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||| |||||||||||| ||||||||||| | ||||||||  ||| |||||||||  ||||||||    
T  1150021 aaatatgatggttgtgatgtgtttatgcacggtgcataagggaataacttatgcaccataacttt 1150085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 214
Target Start/End: Original strand, 44509061 - 44509113
Alignment:
Q  162 ttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataactt 214  Q
    ||||||||||||| | |||| |||||| | || ||||||||||||||||||||    
T  44509061 ttgtgaagtgtttctacagggtgcatatggaactgacttatgcataataactt 44509113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 104; Significance: 1e-51; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 38 - 217
Target Start/End: Original strand, 43852506 - 43852684
Alignment:
Q  38 tgaacatgtccgtataaatcacgttggagcggcgagcaagggtgagaatcatgtcggcatcggagctacaatgagcttctgcgtgtgtgcgatcagatat 137  Q
    ||||| || ||| ||||||||||| |||||||||| ||||||||||||||| ||| || |||||||||| ||||||||||| |||||| |||||||||      
T  43852506 tgaacctggccggataaatcacgtcggagcggcgaacaagggtgagaatcacgtcagcgtcggagctacgatgagcttctgtgtgtgttcgatcagattg 43852605  T
Q  138 tgagagtgcgatcaaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataactttgc 217  Q
    ||||||||||||||||||||||| || |||||| |||||||| | |||||||||||||||||||||||||||||||||||    
T  43852606 tgagagtgcgatcaaatctgatgattatgaagtatttatgcatg-tgcataagaaaatgacttatgcataataactttgc 43852684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 143 - 216
Target Start/End: Complemental strand, 16298997 - 16298924
Alignment:
Q  143 gtgcgatcaaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataactttg 216  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||||    
T  16298997 gtgcgatcaaatctgatggttgtgaagtgattatgcagggtgcataaggaaatgacttatgcataataactttg 16298924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 150 - 215
Target Start/End: Original strand, 25574125 - 25574190
Alignment:
Q  150 caaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  25574125 caaatctgatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataacttt 25574190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 157 - 215
Target Start/End: Complemental strand, 24686634 - 24686576
Alignment:
Q  157 gatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  24686634 gatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataacttt 24686576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 10472565 - 10472501
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||||||||||||||||| |||||||||| | |||||||| ||||||||||||||  ||||||||    
T  10472565 aaatctgatggttgtgaaatgtttatgcacggtgcataaggaaatgacttatgcaccataacttt 10472501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 13635723 - 13635787
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | |||||||| ||||||||||||||  ||||||||    
T  13635723 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttt 13635787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 49492510 - 49492574
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | |||||||| ||||||||||||||  ||||||||    
T  49492510 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttt 49492574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 151 - 205
Target Start/End: Original strand, 26578187 - 26578241
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgca 205  Q
    ||||||||||||||||||||||||||||| |||||||||  ||||| ||||||||    
T  26578187 aaatctgatggttgtgaagtgtttatgcacgatgcataaagaaatggcttatgca 26578241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 118 - 215
Target Start/End: Complemental strand, 38010243 - 38010145
Alignment:
Q  118 gcgtgtgtgcgatcagatattgagagtgcgatc-aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||||  ||| |||| ||   |||||  |||||||||||||||||||||| | |||||||| ||||||||||||||  ||||||||    
T  38010243 gcgtgtgtgcgatcagattgtgaaagtgtgaaggaaatcaaatggttgtgaagtgtttatgcatggtgcataaggaaatgacttatgcaccataacttt 38010145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 153 - 215
Target Start/End: Original strand, 50563729 - 50563790
Alignment:
Q  153 atctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||||||||||||||| |||||| | ||||  ||||||||||||||||||    
T  50563729 atctgatggttgtgaagtgtttatgcagggtgcatatg-aaatatcttatgcataataacttt 50563790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 1621943 - 1621879
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | |||||||| ||||| ||||||||  ||||||||    
T  1621943 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 1621879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 200
Target Start/End: Original strand, 6386539 - 6386590
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggat--gcataagaaaatgactt 200  Q
    ||||||||||||||||||||||||||||||| |  |||||||||||||||||    
T  6386539 aaatctgatggttgtgaagtgtttatgcagggtgcgcataagaaaatgactt 6386590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 15051134 - 15051198
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | |||||||| |||| |||||||||  ||||||||    
T  15051134 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 15051198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 30597767 - 30597703
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | |||||||| |||| |||||||||  ||||||||    
T  30597767 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 30597703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 36011911 - 36011847
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | |||||||| |||| |||||||||  ||||||||    
T  36011911 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 36011847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 46672507 - 46672443
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | |||||||| |||| |||||||||  ||||||||    
T  46672507 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 46672443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 51921263 - 51921327
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | |||||||| |||| |||||||||  ||||||||    
T  51921263 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 51921327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 53441388 - 53441324
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||| |||||||||||| ||||||||||| |||||||||| |||| |||||||||  ||||||||    
T  53441388 aaatttgatggttgtgatgtgtttatgcacgatgcataaggaaataacttatgcaccataacttt 53441324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 55765549 - 55765485
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||| | ||||||||||| | |||||||| ||||||||||||||  ||||||||    
T  55765549 aaatctgatggttgtaatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttt 55765485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 215
Target Start/End: Original strand, 1729615 - 1729677
Alignment:
Q  153 atctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||||||||||||| | || ||||  ||||||||||||||  ||||||||    
T  1729615 atctgatggttgtgaagtgtttatgcacggtgtataaagaaatgacttatgcaccataacttt 1729677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 30357868 - 30357823
Alignment:
Q  158 atggttgtgaagtgtttatgcaggatgcataagaaaatgacttatg 203  Q
    |||||||||||||||||||||| | |||||||| ||||||||||||    
T  30357868 atggttgtgaagtgtttatgcacggtgcataaggaaatgacttatg 30357823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 214
Target Start/End: Original strand, 2848118 - 2848170
Alignment:
Q  162 ttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataactt 214  Q
    |||| |||| |||||||||| |||||||| || ||||||||||||||||||||    
T  2848118 ttgtaaagtatttatgcagggtgcataaggaactgacttatgcataataactt 2848170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 11786042 - 11785978
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | |||||||| |||||  |||||||  ||||||||    
T  11786042 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggtttatgcaccataacttt 11785978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 11798209 - 11798145
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | |||||||| |||||  |||||||  ||||||||    
T  11798209 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggtttatgcaccataacttt 11798145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 27865735 - 27865799
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | |||||| | ||||| ||||||||  ||||||||    
T  27865735 aaatctgatggttgtgatgtgtttatgcacggtgcatatggaaatggcttatgcactataacttt 27865799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 35291546 - 35291610
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||||| |||||||||| ||||||||||| | |||||||| |||| |||||||||  ||||||||    
T  35291546 aaatcttatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 35291610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 49426055 - 49426119
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||| |||||||||||| ||||||||||| | |||||||| |||| |||||||||  ||||||||    
T  49426055 aaatttgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 49426119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 190
Target Start/End: Original strand, 29826600 - 29826643
Alignment:
Q  147 gatcaaatctgatggttgtgaagtgtttatgcaggatgcataag 190  Q
    ||||||||||||||||||||||||| ||||||| | ||||||||    
T  29826600 gatcaaatctgatggttgtgaagtgcttatgcacggtgcataag 29826643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 190
Target Start/End: Complemental strand, 50643814 - 50643771
Alignment:
Q  147 gatcaaatctgatggttgtgaagtgtttatgcaggatgcataag 190  Q
    ||||||||||||||||| ||||||||||||||| | ||||||||    
T  50643814 gatcaaatctgatggttatgaagtgtttatgcacggtgcataag 50643771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 186 - 216
Target Start/End: Complemental strand, 48740638 - 48740608
Alignment:
Q  186 ataagaaaatgacttatgcataataactttg 216  Q
    |||||||||||||||||||||||||||||||    
T  48740638 ataagaaaatgacttatgcataataactttg 48740608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 190
Target Start/End: Complemental strand, 4168423 - 4168386
Alignment:
Q  153 atctgatggttgtgaagtgtttatgcaggatgcataag 190  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  4168423 atctgatggttgtgaagtgtttatgcacggtgcataag 4168386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 190
Target Start/End: Original strand, 26447412 - 26447449
Alignment:
Q  153 atctgatggttgtgaagtgtttatgcaggatgcataag 190  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  26447412 atctgatggttgtgaagtgtttatgcacggtgcataag 26447449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 190
Target Start/End: Original strand, 36621701 - 36621738
Alignment:
Q  153 atctgatggttgtgaagtgtttatgcaggatgcataag 190  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  36621701 atctgatggttgtgaagtgtttatgcacggtgcataag 36621738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 153 - 189
Target Start/End: Complemental strand, 637919 - 637883
Alignment:
Q  153 atctgatggttgtgaagtgtttatgcaggatgcataa 189  Q
    ||||||||||||||||||||||||||| | |||||||    
T  637919 atctgatggttgtgaagtgtttatgcacggtgcataa 637883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 38245012 - 38244948
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||||||||||||| |   |||| ||| ||||| ||||||||  ||||||||    
T  38245012 aaatctgatggttgtgaagtgtttatgaactgtgcagaaggaaatggcttatgcaccataacttt 38244948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 1e-36; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 51 - 217
Target Start/End: Original strand, 16141973 - 16142139
Alignment:
Q  51 ataaatcacgttggagcggcgagcaagggtgagaatcatgtcggcatcggagctacaatgagcttctgcgtgtgtgcgatcagatattgagagtgcgatc 150  Q
    ||||||||||| |||| ||| ||||||||||||||||| ||| || || ||||||| ||||||||| || ||||||| |||| ||  |||| ||||||||    
T  16141973 ataaatcacgtcggagtggcaagcaagggtgagaatcacgtcagcctcagagctaccatgagcttccgcatgtgtgcaatcaaattgtgagtgtgcgatc 16142072  T
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataactttgc 217  Q
    |||||| |||||||||||||||||||||||  |||||||| ||||| ||| |||||||||| |||||    
T  16142073 aaatctaatggttgtgaagtgtttatgcagcgtgcataaggaaatggcttgtgcataataaatttgc 16142139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 38 - 132
Target Start/End: Original strand, 40853586 - 40853680
Alignment:
Q  38 tgaacatgtccgtataaatcacgttggagcggcgagcaagggtgagaatcatgtcggcatcggagctacaatgagcttctgcgtgtgtgcgatca 132  Q
    ||||| || ||| |||||||| || |||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||    
T  40853586 tgaacctggccggataaatcaggtcggagcggcgagcaagggtgagaatcacgtcggcgtcggagctacgatgagcttctgcgtgtgtgcgatca 40853680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 143 - 217
Target Start/End: Complemental strand, 39548118 - 39548044
Alignment:
Q  143 gtgcgatcaaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataactttgc 217  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||    
T  39548118 gtgcgatcaaatttgatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgtataataactttgc 39548044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 150 - 215
Target Start/End: Original strand, 36636934 - 36636999
Alignment:
Q  150 caaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||    
T  36636934 caaatctgatggttgtgaagtgtttatgtagggtacataagaaaatgacttatgcataataacttt 36636999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 5098784 - 5098720
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  5098784 aaatttgatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataacttt 5098720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 150 - 217
Target Start/End: Original strand, 13081857 - 13081924
Alignment:
Q  150 caaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataactttgc 217  Q
    |||||| ||||||||||||||||||||| ||| |||||||  ||||||||||||||||||||||||||    
T  13081857 caaatcagatggttgtgaagtgtttatgtagggtgcataatgaaatgacttatgcataataactttgc 13081924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 40853685 - 40853740
Alignment:
Q  159 tggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataactt 214  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  40853685 tggttgtgaagtgtttatgcaggatgcataaggaaatggcttatgcataataactt 40853740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 25995354 - 25995290
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||||||||||||||||||| |||||||||  |||||||| ||||| ||||||||||||||||||    
T  25995354 aaatctgatggttgtgaagtatttatgcagagtgcataaggaaatgtcttatgcataataacttt 25995290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 8149899 - 8149835
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| |||||||||| ||||| ||||||||  ||||||||    
T  8149899 aaatctgatggttgtgatgtgtttatgcacgatgcataaggaaatggcttatgcaccataacttt 8149835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 8154523 - 8154459
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| |||||||||| ||||| ||||||||  ||||||||    
T  8154523 aaatctgatggttgtgatgtgtttatgcacgatgcataaggaaatggcttatgcaccataacttt 8154459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 153 - 215
Target Start/End: Original strand, 4281788 - 4281850
Alignment:
Q  153 atctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||||||||||||||||||||||| |||  | |||||| ||||| ||||||||||||||||||    
T  4281788 atctgatggttgtgaagtgtttatacagagtacataaggaaatgtcttatgcataataacttt 4281850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 1292177 - 1292241
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||| | | ||||||||||||| |||||||||  ||||||||    
T  1292177 aaatctgatggttgtgatgtgtttatgtacggtgcataagaaaataacttatgcaccataacttt 1292241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 15016564 - 15016628
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | |||||||| |||| |||||||||  ||||||||    
T  15016564 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 15016628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 162 - 214
Target Start/End: Original strand, 24024633 - 24024685
Alignment:
Q  162 ttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataactt 214  Q
    |||||||||||||||||| | |||||||| || ||||||||||||||||||||    
T  24024633 ttgtgaagtgtttatgcatggtgcataaggaattgacttatgcataataactt 24024685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 39355103 - 39355039
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | |||||||| |||| |||||||||  ||||||||    
T  39355103 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 39355039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 7487252 - 7487316
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | |||||||| ||||  ||||||||  ||||||||    
T  7487252 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatagcttatgcaccataacttt 7487316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 9143653 - 9143589
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||||||||| |||||| ||||||||||| | |||||||| |||| |||||||||  ||||||||    
T  9143653 aaatctgatgattgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 9143589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 34464779 - 34464715
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||||||||||||||||  |||||||||| | |||||||| |||| |||||||||  ||||||||    
T  34464779 aaatctgatggttgtgatatgtttatgcacggtgcataaggaaataacttatgcaccataacttt 34464715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 157 - 215
Target Start/End: Complemental strand, 2263635 - 2263577
Alignment:
Q  157 gatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||||||||| | |||||||  ||||| ||||||||  ||||||||    
T  2263635 gatggttgtgaagtgtttatgcacggtgcataaagaaatggcttatgcaccataacttt 2263577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 190
Target Start/End: Original strand, 18298111 - 18298148
Alignment:
Q  153 atctgatggttgtgaagtgtttatgcaggatgcataag 190  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  18298111 atctgatggttgtgaagtgtttatgcacggtgcataag 18298148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 18762928 - 18762871
Alignment:
Q  158 atggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||||||||| ||||||||||| | |||||||| |||| |||||||||  ||||||||    
T  18762928 atggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 18762871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 41346045 - 41346102
Alignment:
Q  158 atggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||||||||||||||||||  | | |||||||||||||| ||||||||  ||||||||    
T  41346045 atggttgtgaagtgtttatatacggtgcataagaaaatggcttatgcaccataacttt 41346102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 2e-22; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 16968013 - 16968087
Alignment:
Q  143 gtgcgatcaaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataactttgc 217  Q
    |||||||||||| |||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||| ||||    
T  16968013 gtgcgatcaaatttgatggttatgaagtgtttatgcagggtgcataagaaaatggcttatgcataataacgttgc 16968087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 143 - 216
Target Start/End: Original strand, 4338610 - 4338683
Alignment:
Q  143 gtgcgatcaaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataactttg 216  Q
    |||||||||||||||||| || ||||||||||||||||| |||||||||||||| ||||||||||| |||||||    
T  4338610 gtgcgatcaaatctgatgattttgaagtgtttatgcagggtgcataagaaaatggcttatgcataacaactttg 4338683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 162 - 214
Target Start/End: Original strand, 27079939 - 27079991
Alignment:
Q  162 ttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataactt 214  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  27079939 ttgtgaagtgtttatgcacggtgcataagaaaatgacttatgcataataactt 27079991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 153 - 215
Target Start/End: Complemental strand, 18611254 - 18611192
Alignment:
Q  153 atctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||||||||||||||  |||||||  ||||| ||||||||||||||||||    
T  18611254 atctgatggttgtgaagtgtttatgcagagtgcataaagaaatgtcttatgcataataacttt 18611192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 165 - 215
Target Start/End: Complemental strand, 32556398 - 32556348
Alignment:
Q  165 tgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  32556398 tgaattgtttatgcagggtgcataagaaaatgacttatgcataataacttt 32556348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 31216730 - 31216666
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | |||||||| ||||||||||||||  ||||||||    
T  31216730 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttt 31216666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 151 - 217
Target Start/End: Complemental strand, 6900871 - 6900805
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataactttgc 217  Q
    ||||||||||||||||| ||||||||||| | |||||||| |||| |||||||||  ||||||||||    
T  6900871 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataactttgc 6900805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 30908713 - 30908656
Alignment:
Q  158 atggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||||||||||||||||||||| | |||||||| ||||||||||||||  ||||||||    
T  30908713 atggttgtgaagtgtttatgcacggtgcataaggaaatgacttatgcaccataacttt 30908656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 1449610 - 1449546
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | |||||||| ||||| ||||||||  ||||||||    
T  1449610 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 1449546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 1536894 - 1536958
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | |||||||| |||| |||||||||  ||||||||    
T  1536894 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 1536958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 7089150 - 7089086
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||||||||| |||||| ||||||||||| | |||||||| |||| |||||||||  ||||||||    
T  7089150 aaatctgatgattgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 7089086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 34870084 - 34870148
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| |||||||| || | |||||||| ||||| ||||||||  ||||||||    
T  34870084 aaatctgatggttgtgatgtgtttatacatggtgcataaggaaatggcttatgcaccataacttt 34870148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 190
Target Start/End: Complemental strand, 35119300 - 35119263
Alignment:
Q  153 atctgatggttgtgaagtgtttatgcaggatgcataag 190  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  35119300 atctgatggttgtgaagtgtttatgcacggtgcataag 35119263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 3e-21; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 33868223 - 33868159
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  33868223 aaatcagatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataacttt 33868159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 153 - 215
Target Start/End: Original strand, 16668794 - 16668856
Alignment:
Q  153 atctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||    
T  16668794 atctgatggttgtgaagtgtttatgcagggtgcataaggaaatgtcttatgcataataacttt 16668856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 153 - 215
Target Start/End: Original strand, 18465556 - 18465618
Alignment:
Q  153 atctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||    
T  18465556 atctgatggttgtgaagtgtttatgcaggatgcataatgaaatgtcttatgcataataacttt 18465618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 154 - 214
Target Start/End: Complemental strand, 4675025 - 4674965
Alignment:
Q  154 tctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataactt 214  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||    
T  4675025 tctgatggttgtgaagtgtttatgcagggtgcataaggaaatgacttacgcataataactt 4674965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 16552637 - 16552701
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||| |||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||    
T  16552637 aaatatgatggttgtgaagtgtttatgcatggtgcataaggaaatgacttatgcataataacttt 16552701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 162 - 215
Target Start/End: Original strand, 39056461 - 39056514
Alignment:
Q  162 ttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||||||||||||| ||||| ||||||||||||||| |||||||||||||||||    
T  39056461 ttgtgaagtgtttaagcagggtgcataagaaaatgatttatgcataataacttt 39056514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 162 - 214
Target Start/End: Original strand, 15913140 - 15913192
Alignment:
Q  162 ttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataactt 214  Q
    |||| |||||||||||||||||||||||| || ||||||||||||||||||||    
T  15913140 ttgtaaagtgtttatgcaggatgcataaggaactgacttatgcataataactt 15913192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 26637835 - 26637899
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | |||||||||||||| ||||||||  ||||||||    
T  26637835 aaatctgatggttgtgatgtgtttatgcacggtgcataagaaaatggcttatgcaccataacttt 26637899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 337 - 378
Target Start/End: Original strand, 15024333 - 15024374
Alignment:
Q  337 aaaccaagtgctcaaacccttgtacccaattaagtattttcc 378  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  15024333 aaaccaagtgctcaaacccttgtgcccaattaagtattttcc 15024374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 162 - 214
Target Start/End: Complemental strand, 7183194 - 7183142
Alignment:
Q  162 ttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataactt 214  Q
    |||||||||||||||||||  |||||||| || ||||||||||||||||||||    
T  7183194 ttgtgaagtgtttatgcagtgtgcataaggaactgacttatgcataataactt 7183142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 13553051 - 13552987
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | |||||||| |||| |||||||||  ||||||||    
T  13553051 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 13552987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 14940354 - 14940418
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | |||||||| |||| |||||||||  ||||||||    
T  14940354 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 14940418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 15416732 - 15416668
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | |||||||| |||| |||||||||  ||||||||    
T  15416732 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 15416668  T

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Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 30783503 - 30783439
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||||||||||||| || ||||||||||| | |||||||| ||||||||||||||  ||||||||    
T  30783503 aaatctgatggttgcgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttt 30783439  T

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Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 3884033 - 3884097
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||| |||||||||| | ||||||||||| | |||||||| ||||||||||||||  ||||||||    
T  3884033 aaatttgatggttgtaatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttt 3884097  T

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Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 14394536 - 14394472
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| || |||||||| | |||||||| |||| |||||||||  ||||||||    
T  14394536 aaatctgatggttgtgatgtatttatgcacggtgcataaggaaataacttatgcaccataacttt 14394472  T

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Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 217
Target Start/End: Complemental strand, 6054422 - 6054367
Alignment:
Q  162 ttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataactttgc 217  Q
    ||||||| || ||||  |||||||||| |||||||||||||||||||| |||||||    
T  6054422 ttgtgaaatgcttatataggatgcataggaaaatgacttatgcataatgactttgc 6054367  T

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Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 190
Target Start/End: Complemental strand, 13362835 - 13362798
Alignment:
Q  153 atctgatggttgtgaagtgtttatgcaggatgcataag 190  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  13362835 atctgatggttgtgaagtgtttatgcacggtgcataag 13362798  T

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Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 190
Target Start/End: Original strand, 25017217 - 25017254
Alignment:
Q  153 atctgatggttgtgaagtgtttatgcaggatgcataag 190  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  25017217 atctgatggttgtgaagtgtttatgcacggtgcataag 25017254  T

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Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 153 - 189
Target Start/End: Complemental strand, 34329192 - 34329156
Alignment:
Q  153 atctgatggttgtgaagtgtttatgcaggatgcataa 189  Q
    ||||||||||||||||||||||||||| | |||||||    
T  34329192 atctgatggttgtgaagtgtttatgcacggtgcataa 34329156  T

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Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 37456748 - 37456684
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||| | | |||||||| ||||| || |||||  ||||||||    
T  37456748 aaatctgatggttgtgatgtgtttatgtacggtgcataaggaaatggctcatgcaccataacttt 37456684  T

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Target: scaffold0006 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 162 - 215
Target Start/End: Complemental strand, 209383 - 209330
Alignment:
Q  162 ttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  209383 ttgtgaagtgtttatgcagggtgcataagaaaatgacttatgcataataacttt 209330  T

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Target: scaffold0006; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 171562 - 171513
Alignment:
Q  162 ttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataa 211  Q
    ||||||||||||||| |||| |||||||| ||||||||||||||||||||    
T  171562 ttgtgaagtgtttatacagggtgcataaggaaatgacttatgcataataa 171513  T

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Target: scaffold0069 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 51416 - 51367
Alignment:
Q  162 ttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataa 211  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  51416 ttgtgaagtgtttatgcagggtgcataagaaaatgacttatgcataataa 51367  T

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Target: scaffold0460 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 1661 - 1612
Alignment:
Q  162 ttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataa 211  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  1661 ttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataa 1612  T

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Target: scaffold0571 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 674 - 738
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | |||||||| ||||| ||||||||  ||||||||    
T  674 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 738  T

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Target: scaffold0045 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 33752 - 33688
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| ||||||||||| | |||||||| ||||| ||||||||  ||||||||    
T  33752 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 33688  T

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Target: scaffold0002 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 215
Target Start/End: Complemental strand, 450256 - 450206
Alignment:
Q  165 tgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||| | || ||||| ||||||||||||||||||||||||    
T  450256 tgaagtgtttatgcaaggtgtataaggaaatgacttatgcataataacttt 450206  T

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Target: scaffold0012 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 162 - 215
Target Start/End: Complemental strand, 119259 - 119206
Alignment:
Q  162 ttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    |||||||||||||||||||| ||||||   |||||||||||| |||||||||||    
T  119259 ttgtgaagtgtttatgcagggtgcatatagaaatgacttatgtataataacttt 119206  T

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Target: scaffold0717 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 214
Target Start/End: Original strand, 7351 - 7403
Alignment:
Q  162 ttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataactt 214  Q
    |||||||||||||||||||| |||||||| |  ||| ||||||||||||||||    
T  7351 ttgtgaagtgtttatgcagggtgcataaggatctgatttatgcataataactt 7403  T

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Target: scaffold0581 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0581
Description:

Target: scaffold0581; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 8419 - 8483
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataagaaaatgacttatgcataataacttt 215  Q
    ||||||||||||||||| |||||||||||   |||||||| ||||| ||||||||  ||||||||    
T  8419 aaatctgatggttgtgatgtgtttatgcacagtgcataaggaaatggcttatgcaccataacttt 8483  T

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Target: scaffold0238 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 151 - 190
Target Start/End: Original strand, 25230 - 25269
Alignment:
Q  151 aaatctgatggttgtgaagtgtttatgcaggatgcataag 190  Q
    ||||||||||||||||||||||||||||| | ||||||||    
T  25230 aaatctgatggttgtgaagtgtttatgcacggtgcataag 25269  T

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