View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11375_high_6 (Length: 576)

Name: NF11375_high_6
Description: NF11375
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11375_high_6
NF11375_high_6
[»] chr7 (2 HSPs)
chr7 (151-557)||(38176970-38177376)
chr7 (155-528)||(42414256-42414620)
[»] chr2 (6 HSPs)
chr2 (402-556)||(28627088-28627242)
chr2 (14-519)||(18977953-18978452)
chr2 (277-519)||(34211875-34212117)
chr2 (284-540)||(35582087-35582343)
chr2 (124-210)||(34211722-34211808)
chr2 (14-78)||(34211657-34211721)
[»] chr8 (1 HSPs)
chr8 (254-519)||(8619084-8619349)
[»] scaffold0094 (1 HSPs)
scaffold0094 (155-519)||(14214-14578)
[»] chr5 (2 HSPs)
chr5 (404-519)||(22498411-22498526)
chr5 (413-520)||(12169085-12169192)
[»] chr1 (1 HSPs)
chr1 (372-465)||(19024112-19024205)
[»] chr3 (2 HSPs)
chr3 (414-520)||(8689686-8689792)
chr3 (414-520)||(9041555-9041661)
[»] chr6 (1 HSPs)
chr6 (416-542)||(31973257-31973385)
[»] chr4 (1 HSPs)
chr4 (479-555)||(49110185-49110261)


Alignment Details
Target: chr7 (Bit Score: 399; Significance: 0; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 399; E-Value: 0
Query Start/End: Original strand, 151 - 557
Target Start/End: Complemental strand, 38177376 - 38176970
Alignment:
Q  151 aaattggaattgggatttgattgcagccatttttaatgaacaagataggaaggctatatccaaactggtgctgttgcatcgagatagagaggacaagcgc 250  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38177376 aaattggaattgggatttgattgcagccatttttaatgaacaagataggaaggctatatccaaactggtgctgttgcatcgagatagagaggacaagcgc 38177277  T
Q  251 atatggaaatttaatagtcagggagtttatacggtaaagtccgcatatagatatgccatggaaacacttgttgatagtgaagaatatcgagtaccgggag 350  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38177276 atatggaaatttaatagtcagggagtttatacggtaaagtccgcatatagatatgccatggaaacacttgttgatagtgaagaatatcgagtaccgggag 38177177  T
Q  351 aatggactcgaatgtggagtttgaagataccacaaagagtaaaagtctttgtctggagagcattgagaggtgttcttcctacgcgtatgcgactgcaaga 450  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  38177176 aatggactcgaatgtggagtttgaagataccacaaagagtaaaagtctttctctggagagcgttgagaggtgttcttcctacgcgtatgcgactgcaaga 38177077  T
Q  451 caaaggtgtgccatgtacagattgttgtcctttttgtgaaacaaattatgagaatgactggcatgtttttcttggatgcgatgaggcgaagacagtttgg 550  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38177076 caaaggtgtgccatgtacagattgttgtcctttttgtgaaacaaattatgagaatgactggcatgtttttcttggatgcgatgaggcgaagacagtttgg 38176977  T
Q  551 cgaacag 557  Q
    |||||||    
T  38176976 cgaacag 38176970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 155 - 528
Target Start/End: Original strand, 42414256 - 42414620
Alignment:
Q  155 tggaattgggatttgattgcagccatttttaatgaacaagataggaaggctatatccaaactggtgctgttgcatcgagatagagaggacaagcgcatat 254  Q
    |||||||||||  |||||||||  ||||| ||||| |||||| |  ||||| |||| ||| |||||||| || | |||||||| || || |||| ||| |    
T  42414256 tggaattgggagctgattgcaggaattttcaatgagcaagatcgagaggctgtatcaaaattggtgctgctgaaccgagatagggatgataagctcatct 42414355  T
Q  255 ggaaatttaatagtcagggagtttatacggtaaagtccgcatatagata-tgccatggaaacacttgttgatagtgaagaatatcgagtaccgggagaat 353  Q
    |||| || |||| ||| |||   || || ||||| || || ||||| || ||| |||||||||||||||||||           ||||||||||| || |    
T  42414356 ggaagttcaataatcaaggaaactacacagtaaaatcggcctataggtaatgctatggaaacacttgttgataa----------cgagtaccgggggact 42414445  T
Q  354 ggactcgaatgtggagtttgaagataccacaaagagtaaaagtctttgtctggagagcattgagaggtgttcttcctacgcgtatgcgactgcaagacaa 453  Q
    ||||  |||||||||   ||||||| ||  ||||| | ||||| ||| | ||||| ||| ||||||| || || || |||||||||||||| ||||| ||    
T  42414446 ggacaagaatgtggaaaatgaagattccggaaagaattaaagtatttttatggagggcactgagaggagtactccccacgcgtatgcgacttcaagataa 42414545  T
Q  454 aggtgtgccatgtacagattgttgtcctttttgtgaaacaaattatgagaatgactggcatgtttttcttggatg 528  Q
    |||||| || || || ||| | || |||||||| |||||||||||||| ||||| ||| || ||||  |||||||    
T  42414546 aggtgttccgtgcacggatagctgccctttttgcgaaacaaattatgaaaatgattggtatattttcattggatg 42414620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 115; Significance: 4e-58; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 402 - 556
Target Start/End: Complemental strand, 28627242 - 28627088
Alignment:
Q  402 tctggagagcattgagaggtgttcttcctacgcgtatgcgactgcaagacaaaggtgtgccatgtacagattgttgtcctttttgtgaaacaaattatga 501  Q
    |||||||||  ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||| | ||||||||||||||||||||||||    
T  28627242 tctggagagtgttgagaggtgttcttcctacgcgtatgcgactgccggacaaaggtgtgccatgtacatattgctctcctttttgtgaaacaaattatga 28627143  T
Q  502 gaatgactggcatgtttttcttggatgcgatgaggcgaagacagtttggcgaaca 556  Q
    ||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  28627142 gaacgactggcatgtttttattggatgcgacgaggcgaagacagtttggcgaaca 28627088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 14 - 519
Target Start/End: Complemental strand, 18978452 - 18977953
Alignment:
Q  14 agatggagaattggaaatggaaagagcataacggtgtgggcagatccgtggctgagggaggatgaaaattcgtatgtctctagtgaaaaaattcaaggca 113  Q
    |||||| |||| | |||||| ||||| ||  |||||||| |||||| |||||| ||||| ||||| |||||||||||  | || |||||| | |||||      
T  18978452 agatggtgaatcgaaaatggtaagagtattgcggtgtggacagatctgtggctaagggaagatgagaattcgtatgttacaagcgaaaaa-tccaaggtt 18978354  T
Q  114 tggaaagaatgaaggtagcagatttgatgagtggagaaaattggaattgggatttgattgcagccatttttaatgaacaagataggaaggctatatccaa 213  Q
    ||||||  |||||||| ||||||||||||||||||||||  ||||||||||   |||| ||||  ||||||||||| || || ||||| || ||||| ||    
T  18978353 tggaaaatatgaaggttgcagatttgatgagtggagaaagctggaattgggggatgatagcagggatttttaatgatcatgacaggaaagcgatatctaa 18978254  T
Q  214 actggtgctgttgcatcgagatagagaggacaagcgcatatggaaatttaatagtcagggagtttatacggtaaagtccgcatatagatatgccatggaa 313  Q
      | |   |  || | || ||| | || || | || ||| ||||| |||||| |||| |||  ||||||||||| ||| |||||||||||||| ||||||    
T  18978253 tttagcattactgaaccgggatggggaagataggctcatttggaagtttaatcgtcatggaaattatacggtaaggtcggcatatagatatgcaatggaa 18978154  T
Q  314 acacttgttgatagtgaagaatatcgagtaccgggagaatggactcgaatgtggagtttgaagataccacaaagagtaaaagtctttgtctggagagcat 413  Q
    |||||||| |||| ||  ||||| ||||| || || ||||||     |||||||||||||||||| || ||||| ||||     ||  | ||||||||      
T  18978153 acacttgtggataatgtggaataccgagttcccggggaatggttaaaaatgtggagtttgaagattccgcaaagggtaa-----ttcctttggagagctg 18978059  T
Q  414 tgagaggtgttcttcctacgcgtatgcgactgcaagacaaaggtgtgccatgtacagattgttgtcctttttgtgaaacaaattatgagaatgactggca 513  Q
    |||| |||||| ||| || |||||||||  ||| ||| |||||||| |||||||| ||||| ||||||||||||||||||||||| || || || |||||    
T  18978058 tgaggggtgtttttcttatgcgtatgcggttgccagataaaggtgttccatgtacggattgctgtcctttttgtgaaacaaattacgaaaacgattggca 18977959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 277 - 519
Target Start/End: Original strand, 34211875 - 34212117
Alignment:
Q  277 ttatacggtaaagtccgcatatagatatgccatggaaacacttgttgatagtgaagaatatcgagtaccgggagaatggactcgaatgtggagtttgaag 376  Q
    ||||||||||| ||| |||||||||||||| |||||||||||||| |||| ||  ||||| |||||  |||||||||||     |||||||||||| |||    
T  34211875 ttatacggtaaggtcggcatatagatatgcaatggaaacacttgtggataatgttgaataccgagtttcgggagaatggttaaaaatgtggagtttaaag 34211974  T
Q  377 ataccacaaagagtaaaagtctttgtctggagagcattgagaggtgttcttcctacgcgtatgcgactgcaagacaaaggtgtgccatgtacagattgtt 476  Q
    || || |||||  ||||||| ||  | ||||||||  |||| |||| | | ||||||||||||||  ||||||| |||| ||| || ||||| ||||| |    
T  34211975 attcctcaaaggataaaagttttcctttggagagctgtgaggggtgctttgcctacgcgtatgcggttgcaagataaagttgttccgtgtacggattgct 34212074  T
Q  477 gtcctttttgtgaaacaaattatgagaatgactggcatgtttt 519  Q
    |||||||||||||||||||||| |||||  | |||||||||||    
T  34212075 gtcctttttgtgaaacaaattacgagaacaattggcatgtttt 34212117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 540
Target Start/End: Complemental strand, 35582343 - 35582087
Alignment:
Q  284 gtaaagtccgcatatagatatgccatggaaacacttgttgatagtgaagaatatcgagtaccgggagaatggactcgaatgtggagtttgaagataccac 383  Q
    |||| ||| |||||||| ||||| | | ||||||||||||||| ||| ||||||| |||||| || |||||||    ||||||| |  ||||||| |  |    
T  35582343 gtaaggtctgcatataggtatgcaacgaaaacacttgttgataatgaggaatatcaagtaccaggggaatggagaaaaatgtggtggatgaagattctgc 35582244  T
Q  384 aaagagtaaaagtctttgtctggagagcattgagaggtgttcttcctacgcgtatgcgactgcaagacaaaggtgtgccatgtacagattgttgtccttt 483  Q
    ||||  ||||||| ||| | ||||| |  |||||||| || ||||| || |||||||  |  ||||| |||||||||   || ||||   | || |||||    
T  35582243 aaaggataaaagtttttatatggagggtgttgagaggagtgcttcccacacgtatgcatcatcaagataaaggtgtgtagtgcacaggaagatgcccttt 35582144  T
Q  484 ttgtgaaacaaattatgagaatgactggcatgtttttcttggatgcgatgaggcgaa 540  Q
    ||| ||||||||||||||||||||||  ||| ||||  |||| ||||| ||||||||    
T  35582143 ttgcgaaacaaattatgagaatgactaacatattttcattgggtgcgaagaggcgaa 35582087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 210
Target Start/End: Original strand, 34211722 - 34211808
Alignment:
Q  124 gaaggtagcagatttgatgagtggagaaaattggaattgggatttgattgcagccatttttaatgaacaagataggaaggctatatc 210  Q
    |||||| ||||||||||||||||||||||  ||||||||||   |||| ||||  ||||||||||| || |||||||| || |||||    
T  34211722 gaaggttgcagatttgatgagtggagaaagctggaattgggggatgatagcagggatttttaatgatcatgataggaaagcgatatc 34211808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 34211657 - 34211721
Alignment:
Q  14 agatggagaattggaaatggaaagagcataacggtgtgggcagatccgtggctgagggaggatga 78  Q
    |||||| ||||||||||||| ||||| ||  |||||||| ||||||||||||| ||||| |||||    
T  34211657 agatggcgaattggaaatggtaagagtattgcggtgtggacagatccgtggctaagggaagatga 34211721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 254 - 519
Target Start/End: Complemental strand, 8619349 - 8619084
Alignment:
Q  254 tggaaatttaatagtcagggagtttatacggtaaagtccgcatatagatatgccatggaaacacttgttgatagtgaagaatatcgagtaccgggagaat 353  Q
    ||||| |||||| |||| | | |||||||||||| ||| |||||||||||||| ||| |||||||||| |||| ||  ||||| ||| | | ||| ||||    
T  8619349 tggaagtttaatcgtcatgaaatttatacggtaaggtcggcatatagatatgcaatgaaaacacttgtggataatgtggaataccgaattctgggggaat 8619250  T
Q  354 ggactcgaatgtggagtttgaagataccacaaagagtaaaagtctttgtctggagagcattgagaggtgttcttcctacgcgtatgcgactgcaagacaa 453  Q
    ||     |||||||||||||||||| || ||||| |||||||| ||  | ||||||||  | || |||||| ||||||||||||||||  ||||||| ||    
T  8619249 ggttaaaaatgtggagtttgaagattccgcaaagggtaaaagttttcctttggagagctgtaaggggtgtttttcctacgcgtatgcggatgcaagataa 8619150  T
Q  454 aggtgtgccatgtacagattgttgtcctttttgtgaaacaaattatgagaatgactggcatgtttt 519  Q
    |||||| |||||||| ||||||||||||||||||||||||||||| ||||| || |||||||||||    
T  8619149 aggtgttccatgtacggattgttgtcctttttgtgaaacaaattacgagaacgattggcatgtttt 8619084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 73; Significance: 4e-33; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 155 - 519
Target Start/End: Original strand, 14214 - 14578
Alignment:
Q  155 tggaattgggatttgattgcagccatttttaatgaacaagataggaaggctatatccaaactggtgctgttgcatcgagatagagaggacaagcgcatat 254  Q
    ||||||||| |  |||||||||  ||||| ||||| |||||| |  |||||||||| ||| |||||||| || | |||||||| || || |||| ||| |    
T  14214 tggaattggaagctgattgcaggaattttcaatgagcaagatcgagaggctatatcgaaattggtgctgctgaaccgagatagggatgataagctcatct 14313  T
Q  255 ggaaatttaatagtcagggagtttatacggtaaagtccgcatatagatatgccatggaaacacttgttgatagtgaagaatatcgagtaccgggagaatg 354  Q
    |||| || |||| ||| |||   || || ||||| || || ||||| ||||| |||||||||||||||||||  || || |||||||||||||| || ||    
T  14314 ggaagttcaataatcaaggaaactacacagtaaaatcggcctataggtatgctatggaaacacttgttgataacgaggagtatcgagtaccgggggactg 14413  T
Q  355 gactcgaatgtggagtttgaagataccacaaagagtaaaagtctttgtctggagagcattgagaggtgttcttcctacgcgtatgcgactgcaagacaaa 454  Q
     ||  |||||||||   ||||||| || |||||| | ||||| ||| | ||||| ||| ||||||| || || || |||||||||||||| ||||| |||    
T  14414 tacaagaatgtggaaaatgaagattccgcaaagaattaaagtatttttatggagggcactgagaggagtactccccacgcgtatgcgacttcaagataaa 14513  T
Q  455 ggtgtgccatgtacagattgttgtcctttttgtgaaacaaattatgagaatgactggcatgtttt 519  Q
    ||||| || || || ||| | |  |||||||| |||||||||||||| ||||| |||||| ||||    
T  14514 ggtgttccgtgcacggatagctaccctttttgcgaaacaaattatgaaaatgattggcatatttt 14578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 6e-23; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 404 - 519
Target Start/End: Complemental strand, 22498526 - 22498411
Alignment:
Q  404 tggagagcattgagaggtgttcttcctacgcgtatgcgactgcaagacaaaggtgtgccatgtacagattgttgtcctttttgtgaaacaaattatgaga 503  Q
    ||||||||  |||| |||||| | ||||||||||||||  ||||||| |||||||| || ||||| ||||| ||||||||||||||||||||||| ||||    
T  22498526 tggagagctgtgaggggtgttttgcctacgcgtatgcggttgcaagataaaggtgttccgtgtacggattgctgtcctttttgtgaaacaaattacgaga 22498427  T
Q  504 atgactggcatgtttt 519  Q
    | || |||||||||||    
T  22498426 acgattggcatgtttt 22498411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 413 - 520
Target Start/End: Original strand, 12169085 - 12169192
Alignment:
Q  413 ttgagaggtgttcttcctacgcgtatgcgactgcaagacaaaggtgtgccatgtacagattgttgtcctttttgtgaaacaaattatgagaatgactggc 512  Q
    |||||||||||||| || || |||||| |||| ||||||||||| |||| |||||| ||| | ||||| ||||||||||| |||||||||||||| || |    
T  12169085 ttgagaggtgttctcccaactcgtatgagactacaagacaaaggcgtgcaatgtacggatagctgtccattttgtgaaactaattatgagaatgattgac 12169184  T
Q  513 atgttttt 520  Q
    | ||||||    
T  12169185 acgttttt 12169192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 372 - 465
Target Start/End: Complemental strand, 19024205 - 19024112
Alignment:
Q  372 tgaagataccacaaagagtaaaagtctttgtctggagagcattgagaggtgttcttcctacgcgtatgcgactgcaagacaaaggtgtgccatg 465  Q
    ||||| |||| ||||| |||||||  ||| | ||||| ||||| ||||||||||||||||| || ||| |||| |||||||||||||| |||||    
T  19024205 tgaagttaccgcaaagggtaaaagcgtttttatggagggcattaagaggtgttcttcctacccggatgagacttcaagacaaaggtgttccatg 19024112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 414 - 520
Target Start/End: Original strand, 8689686 - 8689792
Alignment:
Q  414 tgagaggtgttcttcctacgcgtatgcgactgcaagacaaaggtgtgccatgtacagattgttgtcctttttgtgaaacaaattatgagaatgactggca 513  Q
    ||||||||||||| |  || |||||| |||| ||||| ||||||||||  ||| |  || |||| || ||||||| |||||||||||||||||| | |||    
T  8689686 tgagaggtgttctccaaactcgtatgagactacaagataaaggtgtgcagtgttcgaatagttggccattttgtgcaacaaattatgagaatgattagca 8689785  T
Q  514 tgttttt 520  Q
    |||||||    
T  8689786 tgttttt 8689792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 414 - 520
Target Start/End: Original strand, 9041555 - 9041661
Alignment:
Q  414 tgagaggtgttcttcctacgcgtatgcgactgcaagacaaaggtgtgccatgtacagattgttgtcctttttgtgaaacaaattatgagaatgactggca 513  Q
    ||||||||||||| |  || |||||| |||| ||||| ||||||||||  ||| |  || |||| || ||||||| |||||||||||||||||| | |||    
T  9041555 tgagaggtgttctccaaactcgtatgagactacaagataaaggtgtgcagtgttcgaatagttggccattttgtgcaacaaattatgagaatgattagca 9041654  T
Q  514 tgttttt 520  Q
    |||||||    
T  9041655 tgttttt 9041661  T

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Target: chr6 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 31973385 - 31973257
Alignment:
Q  416 agaggtgttcttcctacgcgtatgcgactgcaagacaaaggtgtgccatgtaca--gattgttgtcctttttgtgaaacaaattatgagaatgactggca 513  Q
    ||||||||||||||||| || ||   ||| ||||| ||| |||||||||||||   ||| ||||||||  |||||| ||||||||||| ||||| |||||    
T  31973385 agaggtgttcttcctacacgaataaaactacaagaaaaatgtgtgccatgtacgaggatagttgtcctcattgtgagacaaattatgaaaatgattggca 31973286  T
Q  514 tgtttttcttggatgcgatgaggcgaaga 542  Q
    |||  || | |||||| | ||||||||||    
T  31973285 tgtcgttataggatgcaaggaggcgaaga 31973257  T

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Target: chr4 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 479 - 555
Target Start/End: Original strand, 49110185 - 49110261
Alignment:
Q  479 cctttttgtgaaacaaattatgagaatgactggcatgtttttcttggatgcgatgaggcgaagacagtttggcgaac 555  Q
    ||||||||| ||||||| ||||||||||| || ||||| ||  |||| ||||| |||||||| |  |||||||||||    
T  49110185 cctttttgtcaaacaaactatgagaatgattgacatgtgttcattggctgcgaagaggcgaaaaatgtttggcgaac 49110261  T

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