View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11379_high_42 (Length: 363)
Name: NF11379_high_42
Description: NF11379
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11379_high_42 |
 | |
|
Alignment Details
Target: chr5 (Bit Score: 338; Significance: 0; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 338; E-Value: 0
Query Start/End: Original strand, 1 - 342
Target Start/End: Complemental strand, 34645972 - 34645631
Alignment:
| Q |
1 |
tgtttttgtaactagatgattttgatggattaaaaatgggagtggtttggttgtaacattgttcacaaggctcgcattgaagccaaacaatgtcactacc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34645972 |
tgtttttgtaactagatgattttgatggattaaaaatgggagtggtttggttgtaacattgttcacaaggctcgcattgaagccaaacaatgtcactacc |
34645873 |
T |
|
| Q |
101 |
tgtatcagcaataccgtatatcttagttggaggggtaccaactgaataggtcatgagataaccacccctatcggggattacagttgattcaggtgtactt |
200 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34645872 |
tgtatcagcaataccatatatcttagttggaggggtaccaactgaataggtcatgagataaccacccctatcggggattacagttgattcaggtgtactt |
34645773 |
T |
|
| Q |
201 |
gtgtcagaatctttaaagaaatgattggcacgattgatggaacgacgtgctgcatcgacaaagtgttggtatttattttcggtaggtttgtagtatggtg |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34645772 |
gtgtcagaatctttaaagaaatgattggcacgattgatggaacgacgtgctgcatcgacaaagtgttggtatttattttcggtaggtttgtagtatggtg |
34645673 |
T |
|
| Q |
301 |
attttggggagtcacggtggatgagttcaacactaaaaccat |
342 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34645672 |
attttggggagtcacggtggatgagttcaacactaaaaccat |
34645631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 338; E-Value: 0
Query Start/End: Original strand, 1 - 342
Target Start/End: Complemental strand, 34665666 - 34665325
Alignment:
| Q |
1 |
tgtttttgtaactagatgattttgatggattaaaaatgggagtggtttggttgtaacattgttcacaaggctcgcattgaagccaaacaatgtcactacc |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
34665666 |
tgtttttgtaactagatgattttgatggattaaaaatgggagtggtttggttgtaacattgttcacaaggctcacattgaagccaaacaatgtcactacc |
34665567 |
T |
|
| Q |
101 |
tgtatcagcaataccgtatatcttagttggaggggtaccaactgaataggtcatgagataaccacccctatcggggattacagttgattcaggtgtactt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34665566 |
tgtatcagcaataccgtatatcttagttggaggggtaccaactgaataggtcatgagataaccacccctatcggggattacagttgattcaggtgtactt |
34665467 |
T |
|
| Q |
201 |
gtgtcagaatctttaaagaaatgattggcacgattgatggaacgacgtgctgcatcgacaaagtgttggtatttattttcggtaggtttgtagtatggtg |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34665466 |
gtgtcagaatctttaaagaaatgattggcacgattgatggaacgacgtgctgcatcgacaaagtgttggtatttattttcggtaggtttgtagtatggtg |
34665367 |
T |
|
| Q |
301 |
attttggggagtcacggtggatgagttcaacactaaaaccat |
342 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34665366 |
attttggggagtcacggtggatgagttcaacactaaaaccat |
34665325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 3 - 339
Target Start/End: Original strand, 19649575 - 19649911
Alignment:
| Q |
3 |
tttttgtaactagatgattttgatggattaaaaatgggagtggtttggttgtaacattgttcacaaggctcgcattgaagccaaacaatgtcactacctg |
102 |
Q |
| |
|
||||||||||| ||||||||||| |||||||| || ||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
19649575 |
tttttgtaacttgatgattttgaaggattaaatataggagtggtttgcttgtagcattgttcacaaggcttacattgaagccaaacaatgtcactacctg |
19649674 |
T |
|
| Q |
103 |
tatcagcaataccgtatatcttagttggaggggtaccaactgaataggtcatgagataaccacccctatcggggattacagttgattcaggtgtacttgt |
202 |
Q |
| |
|
||||| ||| ||| |||| ||| ||||| |||||||| ||||| ||||| | ||| |||| | || | ||| ||||||||||||||| | | |
|
|
| T |
19649675 |
tatcaacaacaccatatacattaaacggaggtgtaccaaccgaataagtcatcaaatactcacctccattgacatatacggttgattcaggtgtattgga |
19649774 |
T |
|
| Q |
203 |
gtcagaatctttaaagaaatgattggcacgattgatggaacgacgtgctgcatcgacaaagtgttggtatttattttcggtaggtttgtagtatggtgat |
302 |
Q |
| |
|
| ||||||||||| ||| ||||||||||||||||||| |||||||| |||| ||||| || ||| |||| |||| | |||||||||| ||||||| |
|
|
| T |
19649775 |
gagggaatctttaaataaacgattggcacgattgatggaccgacgtgcagcattgacaacatgctggaatttgttttgtgcaggtttgtagagtggtgat |
19649874 |
T |
|
| Q |
303 |
tttggggagtcacggtggatgagttcaacactaaaac |
339 |
Q |
| |
|
|||| || || |||||||||||||||| |||||||| |
|
|
| T |
19649875 |
tttgaagaatcgcggtggatgagttcaaaactaaaac |
19649911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 146; Significance: 8e-77; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 1 - 342
Target Start/End: Complemental strand, 14191857 - 14191516
Alignment:
| Q |
1 |
tgtttttgtaactagatgattttgatggattaaaaatgggagtggtttggttgtaacattgttcacaaggctcgcattgaagccaaacaatgtcactacc |
100 |
Q |
| |
|
||||||||||||| || ||||| || |||||||| || |||||||||||||||||||||| || ||||||||| ||||||||||||||||| |||||||| |
|
|
| T |
14191857 |
tgtttttgtaacttgacgatttcgacggattaaacataggagtggtttggttgtaacattcttgacaaggctcacattgaagccaaacaatatcactacc |
14191758 |
T |
|
| Q |
101 |
tgtatcagcaataccgtatatcttagttggaggggtaccaactgaataggtcatgagataaccacccctatcggggattacagttgattcaggtgtactt |
200 |
Q |
| |
|
|||||| ||||||| |||| |||| ||| || |||||||||||||||||||| ||||| | || ||||||||||||||||||||| |||| || || |
|
|
| T |
14191757 |
ggtatcaacaataccatataacttaaatggtggtgtaccaactgaataggtcattagatactcgccgatatcggggattacagttgattgaggtatattt |
14191658 |
T |
|
| Q |
201 |
gtgtcagaatctttaaagaaatgattggcacgattgatggaacgacgtgctgcatcgacaaagtgttggtatttattttcggtaggtttgtagtatggtg |
300 |
Q |
| |
|
| |||| ||| | |||||||||||||| ||||||||||||||||| ||||||||||| | |||||||||||||| |||||||| ||| ||||| |
|
|
| T |
14191657 |
gcaagggaatatttgtaaaaatgattggcacggttgatggaacgacgtgcggcatcgacaaaatattggtatttattttgagtaggtttatagagtggtg |
14191558 |
T |
|
| Q |
301 |
attttggggagtcacggtggatgagttcaacactaaaaccat |
342 |
Q |
| |
|
||||| ||||| |||||||||||||||||||||||||||| |
|
|
| T |
14191557 |
attttaaagagtcgcggtggatgagttcaacactaaaaccat |
14191516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 342
Target Start/End: Complemental strand, 14182917 - 14182576
Alignment:
| Q |
1 |
tgtttttgtaactagatgattttgatggattaaaaatgggagtggtttggttgtaacattgttcacaaggctcgcattgaagccaaacaatgtcactacc |
100 |
Q |
| |
|
||||||||||| | || ||||||||||| ||||| | ||||| ||||| |||||||||| || ||||||||||||||||||||||||||||||||||| |
|
|
| T |
14182917 |
tgtttttgtaagttgacgattttgatggtttaaacttaggagttgtttgattgtaacattctttgcaaggctcgcattgaagccaaacaatgtcactacc |
14182818 |
T |
|
| Q |
101 |
tgtatcagcaataccgtatatcttagttggaggggtaccaactgaataggtcatgagataaccacccctatcggggattacagttgattcaggtgtactt |
200 |
Q |
| |
|
|||||||||||| || |||| |||| ||| ||||||||||||||||||||||||||||| | || |||||||||||||||||||| |||||| || |
|
|
| T |
14182817 |
tgtatcagcaatgccatataacttaaatggtggggtaccaactgaataggtcatgagatactcgccatgatcggggattacagttgattgaggtgtgttt |
14182718 |
T |
|
| Q |
201 |
gtgtcagaatctttaaagaaatgattggcacgattgatggaacgacgtgctgcatcgacaaagtgttggtatttattttcggtaggtttgtagtatggtg |
300 |
Q |
| |
|
||| | | ||| |||||||||||||||||||||| ||||| ||||| |||| ||||| ||||||||||| |||| ||||||| ||| ||||| |
|
|
| T |
14182717 |
gtgagggcagttttgtagaaatgattggcacgattgatagaacggcgtgcggcattgacaatatgttggtatttgttttgtgtaggttggtatagtggtg |
14182618 |
T |
|
| Q |
301 |
attttggggagtcacggtggatgagttcaacactaaaaccat |
342 |
Q |
| |
|
|||||| |||||| |||||||||||||||||||||||||||| |
|
|
| T |
14182617 |
attttgaggagtcgcggtggatgagttcaacactaaaaccat |
14182576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 3 - 342
Target Start/End: Complemental strand, 40717674 - 40717335
Alignment:
| Q |
3 |
tttttgtaactagatgattttgatggattaaaaatgggagtggtttggttgtaacattgttcacaaggctcgcattgaagccaaacaatgtcactacctg |
102 |
Q |
| |
|
||||||||| | |||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40717674 |
tttttgtaagttgatgattttgatggtttaaacttaggagtggtttggttgtaacattgttcacaaggctcgcattgaagccaaacaatgtcactacctg |
40717575 |
T |
|
| Q |
103 |
tatcagcaataccgtatatcttagttggaggggtaccaactgaataggtcatgagataaccacccctatcggggattacagttgattcaggtgtacttgt |
202 |
Q |
| |
|
| ||| |||| || |||| |||| ||| ||| |||||| |||||||||||| ||||| |||| |||| ||||||||| |||||||||||| |||||| |
|
|
| T |
40717574 |
tgtcaacaatgccatataacttaaatggtgggctaccaattgaataggtcatcagatactcaccattatcagggattacatttgattcaggtgaacttgt |
40717475 |
T |
|
| Q |
203 |
gtcagaatctttaaagaaatgattggcacgattgatggaacgacgtgctgcatcgacaaagtgttggtatttattttcggtaggtttgtagtatggtgat |
302 |
Q |
| |
|
|||| ||| |||||||||| ||||| ||||| ||||||||||| |||| |||| | |||||| || |||| ||||||| |||| |||||||| |
|
|
| T |
40717474 |
aagtgaatttttgtagaaatgattagcacggttgatagaacgacgtgcggcattcacaactttttggtacttgttttgtgtaggttggtagaatggtgat |
40717375 |
T |
|
| Q |
303 |
tttggggagtcacggtggatgagttcaacactaaaaccat |
342 |
Q |
| |
|
|||| ||||| |||||||| |||||||| |||||||||| |
|
|
| T |
40717374 |
tttgaagagtcgcggtggataagttcaacgctaaaaccat |
40717335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 53 - 330
Target Start/End: Complemental strand, 14200819 - 14200542
Alignment:
| Q |
53 |
gtaacattgttcacaaggctcgcattgaagccaaacaatgtcactacctgtatcagcaataccgtatatcttagttggaggggtaccaactgaataggtc |
152 |
Q |
| |
|
||||||||||| ||||||||| |||||||||||||||| |||||||||||||||| ||| || ||| |||| ||| || ||||||| |||||| || |
|
|
| T |
14200819 |
gtaacattgtttacaaggctcacattgaagccaaacaaggtcactacctgtatcaacaaagccaaataccttaaatggtggagtaccaattgaataactc |
14200720 |
T |
|
| Q |
153 |
atgagataaccacccctatcggggattacagttgattcaggtgtacttgtgtcagaatctttaaagaaatgattggcacgattgatggaacgacgtgctg |
252 |
Q |
| |
|
|||||||| |||| |||| | | |||||||||||| ||||||||| ||| ||||| ||| ||||||| ||| |||| |||||||||||||| | | |
|
|
| T |
14200719 |
atgagatactcacctttatcagagtttacagttgattgaggtgtactagtgagagaatatttgtagaaatggttgacacggttgatggaacgacgcaccg |
14200620 |
T |
|
| Q |
253 |
catcgacaaagtgttggtatttattttcggtaggtttgtagtatggtgattttggggagtcacggtggatgagttcaa |
330 |
Q |
| |
|
||| | ||| | ||| |||||| |||| ||||||| |||| |||||||||||| ||||| || ||||||||||||| |
|
|
| T |
14200619 |
cattggcaatgcgttcgtatttgttttgtgtaggttggtagaatggtgattttgaagagtcgcgatggatgagttcaa |
14200542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 140; Significance: 3e-73; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 340
Target Start/End: Complemental strand, 34302630 - 34302291
Alignment:
| Q |
1 |
tgtttttgtaactagatgattttgatggattaaaaatgggagtggtttggttgtaacattgttcacaaggctcgcattgaagccaaacaatgtcactacc |
100 |
Q |
| |
|
||||||||||||| ||||| |||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
34302630 |
tgtttttgtaactcgatgactttgatggattaaacttaggagtggtttgattgtaacattgttcacaaggctcgcattgtagccatacaatgtcactacc |
34302531 |
T |
|
| Q |
101 |
tgtatcagcaataccgtatatcttagttggaggggtaccaactgaataggtcatgagataaccacccctatcggggattacagttgattcaggtgtactt |
200 |
Q |
| |
|
|||||| ||||||| ||| |||| |||| ||||| |||||||||||| |||||| |||| ||||| || | ||||||||||||||||||||||||| |
|
|
| T |
34302530 |
tgtatcgacaataccatatgacttaattggtggggtgccaactgaatagctcatgatataatcaccctcataagagattacagttgattcaggtgtactt |
34302431 |
T |
|
| Q |
201 |
gtgtcagaatctttaaagaaatgattggcacgattgatggaacgacgtgctgcatcgacaaagtgttggtatttattttcggtaggtttgtagtatggtg |
300 |
Q |
| |
|
| ||||| ||| | |||||| |||||||||| |||||| || |||||||||||| ||||||||||| |||| |||||||||||| | |||| |
|
|
| T |
34302430 |
gcaagagaatttttgttagagtgattgacacgattgatcgaacgatgtactgcatcgacaacatgttggtatttgttttgtgtaggtttgtagaaaggtg |
34302331 |
T |
|
| Q |
301 |
attttggggagtcacggtggatgagttcaacactaaaacc |
340 |
Q |
| |
|
|||||| |||||||||||| || ||||||| ||||||||| |
|
|
| T |
34302330 |
attttgaggagtcacggtgtataagttcaatactaaaacc |
34302291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 342
Target Start/End: Original strand, 33890023 - 33890068
Alignment:
| Q |
297 |
ggtgattttggggagtcacggtggatgagttcaacactaaaaccat |
342 |
Q |
| |
|
|||||||||| ||||||||| || |||||||||||||| ||||||| |
|
|
| T |
33890023 |
ggtgattttgaggagtcacgatgaatgagttcaacactgaaaccat |
33890068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 130; Significance: 3e-67; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 45645168 - 45644907
Alignment:
| Q |
1 |
tgtttttgtaactagatgattttgatggattaaaaatgggagtggtttggttgtaacattgttcacaaggctcgcattgaagccaaacaatgtcactacc |
100 |
Q |
| |
|
||||| ||||||| |||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
45645168 |
tgtttatgtaacttgatgattttgatggattaaacttaggagtggtttggttgtaacattgtttacaaggctcgcattgaagccaaacaatgtcactacc |
45645069 |
T |
|
| Q |
101 |
tgtatcagcaataccgtat-atcttagttggaggggtaccaactgaataggtcatgagataaccacccctatcggggattacagttgattcaggtgtact |
199 |
Q |
| |
|
|||||| |||||| ||| | |||| ||| |||||||||||| ||||| ||||||||||| ||| ||| |||||| |||||||||||||||||||| |
|
|
| T |
45645068 |
tgtatcgataataccatataaacttaaatggtggggtaccaactcaatagttcatgagataagaacctgtattggggatcacagttgattcaggtgtact |
45644969 |
T |
|
| Q |
200 |
tgtgtcagaatctttaaagaaatgattggcacgattgatggaacgacgtgctgcatcgacaa |
261 |
Q |
| |
|
|| | ||||| |||| ||||||||||| ||||| ||||||||||| ||||||||| ||||| |
|
|
| T |
45644968 |
tgcgagagaatttttatagaaatgattgacacgaatgatggaacgatgtgctgcattgacaa |
45644907 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 342
Target Start/End: Complemental strand, 1390194 - 1389912
Alignment:
| Q |
62 |
ttcacaaggctcgcattgaagccaaacaatgtcactacctgtatcagcaataccgtatat---cttagttggaggggtaccaactgaataggtcatgaga |
158 |
Q |
| |
|
||||||||||| |||||||||||||| |||||||||||||||||| ||||||| |||| ||| ||| |||||||| |||||||||||||| ||| |
|
|
| T |
1390194 |
ttcacaaggcttacattgaagccaaaccatgtcactacctgtatcaacaataccatataataactttaatggtggggtaccgactgaataggtcataaga |
1390095 |
T |
|
| Q |
159 |
taaccacccctatcggggattacagttgattcaggtgtacttgtgtcagaatctttaaagaaatgattggcacgattgatggaacgacgtgctgcatcga |
258 |
Q |
| |
|
| |||| || ||||||| ||||| |||| |||| | | || |||| || ||||||||| | |||||| ||||||||| | |||| || |
|
|
| T |
1390094 |
aactcacctttagcggggatcacagtggatttaggtttgttagtaagggaatgttagtagaaatgatcgacacgatcaatggaacgatgcatggcattga |
1389995 |
T |
|
| Q |
259 |
caaagtgttggtatttattttcggtaggtttgtagtatggtgattttggggagtcacggtggatgagttcaacactaaaaccat |
342 |
Q |
| |
|
|| | ||||||||||||||| ||||||| |||| ||||||||||| ||||||||||||||||||||||||||||| |||| |
|
|
| T |
1389994 |
cacac-gttggtatttattttgtgtaggttggtagagtggtgattttgaagagtcacggtggatgagttcaacactaaagccat |
1389912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 341
Target Start/End: Complemental strand, 45644898 - 45644853
Alignment:
| Q |
296 |
tggtgattttggggagtcacggtggatgagttcaacactaaaacca |
341 |
Q |
| |
|
||||||||||| |||||| ||||| || |||||||||||||||||| |
|
|
| T |
45644898 |
tggtgattttgaggagtcgcggtgaataagttcaacactaaaacca |
45644853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 44; Significance: 6e-16; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 28402797 - 28402694
Alignment:
| Q |
3 |
tttttgtaactagatgattttgatggattaaaaatgggagtggtttggttgtaacattgttcacaaggctcgcattgaagccaaacaatgtcactacctg |
102 |
Q |
| |
|
||||||||||| || |||||||| |||||||| || |||| |||||| ||| ||||| | |||||||| ||||||||||||||| |||| |||||||| |
|
|
| T |
28402797 |
tttttgtaacttgaagattttgaaggattaaatataggagaggtttgattgaaacatgtatgacaaggctggcattgaagccaaactatgttactacctg |
28402698 |
T |
|
| Q |
103 |
tatc |
106 |
Q |
| |
|
|||| |
|
|
| T |
28402697 |
tatc |
28402694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 106
Target Start/End: Original strand, 45396688 - 45396791
Alignment:
| Q |
3 |
tttttgtaactagatgattttgatggattaaaaatgggagtggtttggttgtaacattgttcacaaggctcgcattgaagccaaacaatgtcactacctg |
102 |
Q |
| |
|
||||||||||| || |||||||| |||||||| || |||| |||||| ||| ||||| | |||||||| ||||||||||||||| |||| |||||||| |
|
|
| T |
45396688 |
tttttgtaacttgaagattttgaaggattaaatataggagaggtttgattgaaacatgtattacaaggctggcattgaagccaaactatgttactacctg |
45396787 |
T |
|
| Q |
103 |
tatc |
106 |
Q |
| |
|
|||| |
|
|
| T |
45396788 |
tatc |
45396791 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 44491543 - 44491645
Alignment:
| Q |
4 |
ttttgtaactagatgattttgatggattaaaaatgggagtggtttggttgtaacattgttcacaaggctcgcattgaagccaaacaatgtcactacctgt |
103 |
Q |
| |
|
|||||||||| || |||||||| |||||||| || || | |||||| ||||||||| | ||||||| ||||||||||||||| | |||||||||||| |
|
|
| T |
44491543 |
ttttgtaacttgaagattttgaaggattaaatataggcgaggtttgcttgtaacatatattgcaaggcttgcattgaagccaaactaagtcactacctgt |
44491642 |
T |
|
| Q |
104 |
atc |
106 |
Q |
| |
|
||| |
|
|
| T |
44491643 |
atc |
44491645 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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