View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11379_high_50 (Length: 338)
Name: NF11379_high_50
Description: NF11379
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11379_high_50 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 313; Significance: 1e-176; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 14 - 338
Target Start/End: Original strand, 25471150 - 25471474
Alignment:
| Q |
14 |
caaaggcaagatattatccgaatttagaacgaacattgccgaaatcgtcgtcggacacagttacgtagtatccgcacacgtgattaaagataaccccgca |
113 |
Q |
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| T |
25471150 |
caaaggcaagatattatccgaatttagaacgaacattgccgaaatcgtcgtcggacacagttacgtagtatccgcacacgtgattaaagataaccccaca |
25471249 |
T |
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| Q |
114 |
attgtggtacgatgcggttgtgcaggctatcataactgcaatgttgcggccgcaattgcggatgcagaccgctaatttgaaaccatgacctcattacaca |
213 |
Q |
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| T |
25471250 |
attgtggtacgatgcggttgtgcaggctatcacaactgcaatgttgcggccgcaattgcggatgcagaccgctaatttgaaaccatgacctcattacaca |
25471349 |
T |
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| Q |
214 |
agaagaagcatggataccgctaaatgcataaagtaacaactatattgtgaaaagttgatctcggactccatggatgtatagaaaaggttgcaaataagca |
313 |
Q |
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| T |
25471350 |
agaagaagcatgaataccgctaaatgcataaagtaacaactatattgtgaaaagttgatctcggactccatggatgtatagaaaaggttgcaaataagca |
25471449 |
T |
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| Q |
314 |
tagagaacaaattaaagaagaagca |
338 |
Q |
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| T |
25471450 |
tagagaacaaattaaagaagaagca |
25471474 |
T |
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