View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11379_high_72 (Length: 256)
Name: NF11379_high_72
Description: NF11379
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11379_high_72 |
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Alignment Details
Target: chr1 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 31486574 - 31486819
Alignment:
| Q |
1 |
gtttatcaccgtcgttctcaagattagcagttgcatttgttcggatctctctagggtgaagccctcctttggcatcaacaactgctctgctatctaaaga |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31486574 |
gtttatcaccgtcgttctcaagattagcagttgcatttgttcggatctctctagggtgaagccctcctttggcatcaacaactgctctgctatctaaaga |
31486673 |
T |
|
| Q |
101 |
aagcctaggagcctctcttgagaatttccatgaagaccttgtaccttccttaagttccagaacaggaaggacttgttttgtttcacttttgatctcttta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31486674 |
aagcctaggagcctctcttgagaatttccatgaagaccttgtaccttccttaagttccagaacaggaaggacttgttttgtttcacttttgatctcttta |
31486773 |
T |
|
| Q |
201 |
accggtgacggtgatgacaacaccggtttgccatcatctttctctg |
246 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
31486774 |
accggtgacggtgatgaaaacaccggtttgccatcatctttctctg |
31486819 |
T |
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