View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11379_low_3 (Length: 684)

Name: NF11379_low_3
Description: NF11379
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11379_low_3
NF11379_low_3
[»] chr4 (59 HSPs)
chr4 (301-622)||(11127455-11127774)
chr4 (127-288)||(8108965-8109129)
chr4 (127-288)||(43771135-43771299)
chr4 (127-286)||(722168-722330)
chr4 (127-288)||(39471166-39471330)
chr4 (128-287)||(50164405-50164567)
chr4 (127-273)||(754587-754736)
chr4 (127-273)||(20454564-20454711)
chr4 (127-288)||(24834587-24834751)
chr4 (127-273)||(47009213-47009362)
chr4 (127-255)||(26361315-26361446)
chr4 (1-73)||(11127963-11128035)
chr4 (127-287)||(49242180-49242343)
chr4 (127-270)||(34129407-34129553)
chr4 (135-260)||(24938430-24938558)
chr4 (127-267)||(19447161-19447305)
chr4 (127-244)||(45310955-45311075)
chr4 (127-288)||(40991596-40991760)
chr4 (127-254)||(22542424-22542554)
chr4 (142-273)||(33653511-33653645)
chr4 (131-272)||(25719123-25719268)
chr4 (196-271)||(48339419-48339494)
chr4 (127-267)||(13069971-13070114)
chr4 (138-264)||(29699522-29699650)
chr4 (153-261)||(50652369-50652479)
chr4 (128-273)||(49077273-49077421)
chr4 (176-291)||(46242000-46242116)
chr4 (214-291)||(47237838-47237915)
chr4 (196-271)||(42862500-42862575)
chr4 (214-272)||(21776942-21777000)
chr4 (199-273)||(22592328-22592402)
chr4 (127-267)||(10169652-10169795)
chr4 (228-273)||(16178697-16178742)
chr4 (196-273)||(33996014-33996091)
chr4 (214-270)||(2088762-2088818)
chr4 (170-249)||(31250933-31251015)
chr4 (165-267)||(20225386-20225491)
chr4 (214-271)||(37315589-37315643)
chr4 (218-273)||(39016687-39016742)
chr4 (196-256)||(11127794-11127854)
chr4 (124-165)||(11127854-11127894)
chr4 (159-259)||(50481584-50481687)
chr4 (196-273)||(50571888-50571965)
chr4 (199-271)||(16178610-16178681)
chr4 (214-273)||(27654501-27654560)
chr4 (130-185)||(37451023-37451078)
chr4 (199-270)||(41153280-41153351)
chr4 (210-257)||(43124607-43124654)
chr4 (228-271)||(51206157-51206200)
chr4 (127-165)||(5545714-5545752)
chr4 (127-259)||(38636375-38636508)
chr4 (231-273)||(40812061-40812103)
chr4 (210-274)||(18421922-18421984)
chr4 (236-277)||(30111787-30111828)
chr4 (240-277)||(37422921-37422958)
chr4 (127-184)||(38537520-38537577)
chr4 (203-271)||(2187899-2187967)
chr4 (214-262)||(48608115-48608163)
chr4 (252-288)||(53870998-53871034)
[»] chr6 (34 HSPs)
chr6 (127-273)||(34905360-34905509)
chr6 (127-287)||(5106308-5106471)
chr6 (124-287)||(10133162-10133328)
chr6 (142-288)||(31116146-31116295)
chr6 (142-273)||(445842-445976)
chr6 (127-242)||(16851980-16852098)
chr6 (134-272)||(21987317-21987458)
chr6 (127-287)||(1392640-1392800)
chr6 (142-262)||(2675930-2676053)
chr6 (134-237)||(12780773-12780879)
chr6 (128-250)||(32112725-32112850)
chr6 (127-273)||(31443983-31444132)
chr6 (127-288)||(12753767-12753931)
chr6 (127-271)||(19090221-19090369)
chr6 (196-273)||(35128802-35128879)
chr6 (127-244)||(16187441-16187557)
chr6 (127-244)||(16187659-16187775)
chr6 (196-273)||(4595766-4595843)
chr6 (149-273)||(32122819-32122946)
chr6 (127-273)||(10060883-10061033)
chr6 (174-268)||(17144725-17144822)
chr6 (199-273)||(12327287-12327361)
chr6 (214-270)||(6531395-6531451)
chr6 (233-273)||(8441953-8441993)
chr6 (233-273)||(8450757-8450797)
chr6 (198-273)||(2931585-2931660)
chr6 (214-273)||(12690276-12690335)
chr6 (228-273)||(373513-373558)
chr6 (228-273)||(9940382-9940427)
chr6 (128-207)||(8441857-8441939)
chr6 (128-207)||(8450661-8450743)
chr6 (229-273)||(12488156-12488200)
chr6 (227-271)||(19737545-19737589)
chr6 (235-287)||(32439486-32439538)
[»] chr3 (56 HSPs)
chr3 (127-288)||(28529262-28529424)
chr3 (127-288)||(20493452-20493616)
chr3 (127-288)||(37776710-37776874)
chr3 (127-288)||(41451902-41452066)
chr3 (127-288)||(24734714-24734878)
chr3 (127-288)||(52123963-52124127)
chr3 (134-261)||(18427164-18427294)
chr3 (127-288)||(5452069-5452231)
chr3 (130-272)||(20791321-20791466)
chr3 (127-273)||(27243069-27243219)
chr3 (130-267)||(46160977-46161117)
chr3 (174-273)||(26310500-26310602)
chr3 (142-267)||(46450095-46450224)
chr3 (133-253)||(29588746-29588869)
chr3 (133-288)||(48351445-48351603)
chr3 (127-272)||(14236044-14236192)
chr3 (128-288)||(29755509-29755672)
chr3 (199-271)||(46237128-46237200)
chr3 (142-267)||(138793-138921)
chr3 (135-288)||(45515512-45515666)
chr3 (124-241)||(50156664-50156784)
chr3 (198-271)||(41707520-41707593)
chr3 (196-273)||(46575972-46576049)
chr3 (148-287)||(10948588-10948730)
chr3 (199-271)||(37600212-37600284)
chr3 (228-271)||(24748933-24748976)
chr3 (196-267)||(30624661-30624732)
chr3 (196-271)||(54140972-54141047)
chr3 (127-268)||(8824986-8825130)
chr3 (174-287)||(22604570-22604686)
chr3 (199-273)||(50661604-50661678)
chr3 (142-258)||(55452037-55452156)
chr3 (235-287)||(13639412-13639464)
chr3 (174-249)||(19345054-19345132)
chr3 (128-184)||(43016529-43016585)
chr3 (127-257)||(2009035-2009167)
chr3 (127-273)||(15790377-15790525)
chr3 (124-195)||(39186069-39186140)
chr3 (174-288)||(40715916-40716033)
chr3 (137-195)||(2419481-2419539)
chr3 (199-272)||(13809107-13809179)
chr3 (228-277)||(42780690-42780739)
chr3 (214-271)||(43657093-43657150)
chr3 (127-269)||(24748916-24749062)
chr3 (212-288)||(29389108-29389184)
chr3 (235-286)||(29235658-29235709)
chr3 (228-271)||(38928032-38928075)
chr3 (214-271)||(10769822-10769879)
chr3 (127-180)||(49418426-49418479)
chr3 (237-286)||(54187050-54187099)
chr3 (199-259)||(21232604-21232664)
chr3 (127-163)||(27243054-27243090)
chr3 (137-208)||(29388611-29388685)
chr3 (205-273)||(36750960-36751028)
chr3 (235-287)||(48543262-48543314)
chr3 (232-288)||(52951475-52951531)
[»] chr7 (56 HSPs)
chr7 (127-273)||(22189963-22190112)
chr7 (127-269)||(11824099-11824242)
chr7 (127-288)||(27949282-27949446)
chr7 (127-288)||(27888291-27888455)
chr7 (127-267)||(11692209-11692352)
chr7 (127-287)||(32212877-32213039)
chr7 (127-288)||(32205088-32205249)
chr7 (127-288)||(33008113-33008274)
chr7 (127-273)||(7775024-7775172)
chr7 (127-273)||(39254107-39254256)
chr7 (127-273)||(44350809-44350958)
chr7 (127-288)||(46517302-46517464)
chr7 (142-273)||(12263458-12263592)
chr7 (127-273)||(6442189-6442338)
chr7 (134-288)||(14795140-14795297)
chr7 (134-288)||(15242132-15242289)
chr7 (160-288)||(31502504-31502635)
chr7 (127-235)||(6580009-6580120)
chr7 (199-271)||(17354609-17354681)
chr7 (127-242)||(25686842-25686960)
chr7 (127-272)||(24539129-24539278)
chr7 (136-288)||(19422850-19423005)
chr7 (127-196)||(30742547-30742616)
chr7 (127-267)||(48374446-48374589)
chr7 (195-259)||(8073366-8073430)
chr7 (127-272)||(17749719-17749868)
chr7 (127-223)||(27320448-27320547)
chr7 (196-273)||(44511015-44511092)
chr7 (196-271)||(13919806-13919881)
chr7 (196-258)||(19494418-19494480)
chr7 (199-268)||(26703522-26703591)
chr7 (139-267)||(32178823-32178953)
chr7 (235-286)||(43930078-43930129)
chr7 (127-271)||(45909481-45909630)
chr7 (138-287)||(7459353-7459505)
chr7 (196-273)||(12271010-12271086)
chr7 (196-256)||(10477278-10477338)
chr7 (199-271)||(22786177-22786249)
chr7 (246-277)||(22155939-22155970)
chr7 (246-277)||(22211854-22211885)
chr7 (214-273)||(32055600-32055659)
chr7 (127-182)||(38065333-38065388)
chr7 (199-262)||(46067973-46068036)
chr7 (142-192)||(12167315-12167365)
chr7 (235-277)||(25980769-25980811)
chr7 (225-267)||(31874061-31874103)
chr7 (228-270)||(45909570-45909612)
chr7 (232-273)||(2520657-2520698)
chr7 (205-258)||(25428567-25428620)
chr7 (228-273)||(27320249-27320294)
chr7 (127-196)||(36845498-36845567)
chr7 (165-257)||(36845567-36845661)
chr7 (229-286)||(47821990-47822047)
chr7 (214-270)||(14759670-14759726)
chr7 (231-271)||(19840908-19840948)
chr7 (234-278)||(49160366-49160410)
[»] chr2 (49 HSPs)
chr2 (127-269)||(9470109-9470253)
chr2 (127-288)||(26767768-26767932)
chr2 (127-288)||(45554576-45554732)
chr2 (127-273)||(6980127-6980276)
chr2 (127-288)||(12989200-12989364)
chr2 (131-273)||(38464187-38464332)
chr2 (127-271)||(44274260-44274407)
chr2 (141-273)||(10981542-10981677)
chr2 (174-288)||(18511263-18511380)
chr2 (128-258)||(35316409-35316542)
chr2 (132-272)||(15884458-15884597)
chr2 (128-273)||(11539447-11539598)
chr2 (135-283)||(19639107-19639258)
chr2 (135-283)||(19837700-19837851)
chr2 (127-259)||(32856142-32856277)
chr2 (148-287)||(36471866-36472008)
chr2 (199-271)||(42182915-42182987)
chr2 (205-271)||(28898125-28898191)
chr2 (199-268)||(1110227-1110296)
chr2 (196-286)||(3804595-3804686)
chr2 (199-273)||(15508938-15509012)
chr2 (133-290)||(30718340-30718499)
chr2 (214-272)||(41805873-41805931)
chr2 (214-271)||(1107064-1107121)
chr2 (214-270)||(4964770-4964826)
chr2 (214-258)||(6315697-6315741)
chr2 (133-288)||(37652258-37652416)
chr2 (127-273)||(34142146-34142295)
chr2 (231-273)||(42579771-42579813)
chr2 (175-266)||(2476565-2476659)
chr2 (153-288)||(16719463-16719601)
chr2 (210-270)||(17188092-17188152)
chr2 (225-273)||(25666701-25666749)
chr2 (204-271)||(37228524-37228592)
chr2 (142-258)||(4602890-4603008)
chr2 (228-271)||(37719860-37719903)
chr2 (214-273)||(43400157-43400216)
chr2 (218-272)||(11775859-11775913)
chr2 (229-279)||(23403802-23403852)
chr2 (228-270)||(28898061-28898103)
chr2 (127-172)||(8009522-8009567)
chr2 (127-238)||(25238284-25238399)
chr2 (127-180)||(30706390-30706443)
chr2 (214-271)||(31395542-31395599)
chr2 (214-267)||(31494236-31494289)
chr2 (212-288)||(2122804-2122880)
chr2 (127-195)||(4552847-4552915)
chr2 (218-266)||(24895368-24895416)
chr2 (198-254)||(32701513-32701569)
[»] chr8 (48 HSPs)
chr8 (127-267)||(34861199-34861337)
chr8 (128-284)||(1977181-1977340)
chr8 (134-273)||(17499247-17499389)
chr8 (127-273)||(8903876-8904025)
chr8 (127-288)||(16983403-16983567)
chr8 (142-273)||(32072121-32072255)
chr8 (122-288)||(24055927-24056096)
chr8 (127-273)||(9952765-9952913)
chr8 (127-273)||(5979904-5980052)
chr8 (127-273)||(36804846-36804995)
chr8 (160-269)||(8914799-8914911)
chr8 (131-288)||(28413881-28414040)
chr8 (127-288)||(35151736-35151900)
chr8 (127-274)||(6098784-6098932)
chr8 (148-267)||(43506566-43506687)
chr8 (127-272)||(13407330-13407479)
chr8 (142-288)||(41727439-41727588)
chr8 (124-272)||(45246459-45246610)
chr8 (196-259)||(31301153-31301216)
chr8 (196-271)||(35689506-35689581)
chr8 (148-276)||(17741555-17741686)
chr8 (199-267)||(6387591-6387659)
chr8 (131-273)||(7493353-7493503)
chr8 (165-266)||(35797426-35797530)
chr8 (228-273)||(13856506-13856551)
chr8 (129-196)||(5727335-5727403)
chr8 (142-273)||(14236362-14236496)
chr8 (229-273)||(16441919-16441963)
chr8 (127-273)||(17915840-17915985)
chr8 (214-273)||(16314372-16314431)
chr8 (128-186)||(5095768-5095826)
chr8 (170-267)||(17716881-17716981)
chr8 (214-272)||(23685156-23685214)
chr8 (196-269)||(1961310-1961383)
chr8 (204-273)||(7599509-7599578)
chr8 (134-286)||(11962696-11962850)
chr8 (214-267)||(45218614-45218667)
chr8 (127-258)||(9193421-9193555)
chr8 (228-272)||(44709296-44709340)
chr8 (198-273)||(9192025-9192100)
chr8 (213-271)||(29011079-29011137)
chr8 (127-236)||(34952504-34952616)
chr8 (218-288)||(39023439-39023509)
chr8 (236-277)||(14195225-14195266)
chr8 (228-273)||(16441828-16441873)
chr8 (229-269)||(9905839-9905879)
chr8 (127-250)||(13214542-13214668)
chr8 (250-286)||(28700564-28700600)
[»] chr1 (66 HSPs)
chr1 (127-288)||(26980269-26980433)
chr1 (131-272)||(19101612-19101756)
chr1 (133-274)||(41948159-41948303)
chr1 (127-288)||(6133632-6133795)
chr1 (128-267)||(2225254-2225396)
chr1 (138-274)||(33193073-33193212)
chr1 (142-273)||(29673499-29673633)
chr1 (128-288)||(25543349-25543511)
chr1 (127-257)||(30678918-30679051)
chr1 (127-269)||(28218053-28218200)
chr1 (135-288)||(10659784-10659940)
chr1 (127-273)||(32211791-32211940)
chr1 (127-288)||(11987635-11987799)
chr1 (142-259)||(41958121-41958241)
chr1 (142-273)||(44271942-44272076)
chr1 (127-288)||(8899023-8899187)
chr1 (127-273)||(15928579-15928726)
chr1 (127-256)||(8741230-8741362)
chr1 (127-273)||(14094007-14094157)
chr1 (131-273)||(37552962-37553105)
chr1 (197-261)||(50539160-50539224)
chr1 (127-289)||(27570233-27570398)
chr1 (127-271)||(41095615-41095763)
chr1 (199-269)||(50773193-50773263)
chr1 (196-273)||(32848662-32848739)
chr1 (199-271)||(11135765-11135837)
chr1 (199-271)||(11430467-11430539)
chr1 (174-273)||(49730888-49730990)
chr1 (127-272)||(13114676-13114825)
chr1 (214-273)||(18157062-18157121)
chr1 (142-265)||(35336896-35337018)
chr1 (196-267)||(41918025-41918096)
chr1 (132-261)||(15468256-15468388)
chr1 (214-272)||(15523235-15523293)
chr1 (214-272)||(15531229-15531287)
chr1 (130-180)||(21466630-21466680)
chr1 (214-272)||(22540393-22540451)
chr1 (148-261)||(45179274-45179390)
chr1 (214-267)||(4578674-4578727)
chr1 (127-187)||(39974207-39974267)
chr1 (178-288)||(3872692-3872804)
chr1 (127-186)||(16948536-16948595)
chr1 (151-288)||(931383-931523)
chr1 (228-270)||(13388361-13388403)
chr1 (235-277)||(24886057-24886099)
chr1 (174-266)||(37525560-37525655)
chr1 (195-267)||(43851113-43851185)
chr1 (133-184)||(12767341-12767392)
chr1 (214-273)||(14341018-14341077)
chr1 (214-261)||(15660929-15660976)
chr1 (128-271)||(28109894-28110040)
chr1 (214-273)||(44739142-44739201)
chr1 (231-270)||(50424980-50425019)
chr1 (228-270)||(11135853-11135895)
chr1 (178-291)||(31074722-31074838)
chr1 (214-259)||(9165340-9165385)
chr1 (214-259)||(13388436-13388481)
chr1 (236-277)||(19078931-19078972)
chr1 (236-277)||(19126819-19126860)
chr1 (236-273)||(28274810-28274847)
chr1 (214-266)||(5602657-5602709)
chr1 (196-268)||(36566925-36566997)
chr1 (131-163)||(36567027-36567059)
chr1 (127-163)||(39019704-39019740)
chr1 (232-288)||(39039470-39039526)
chr1 (133-259)||(39499433-39499564)
[»] chr5 (36 HSPs)
chr5 (127-270)||(28490729-28490875)
chr5 (142-259)||(10141998-10142118)
chr5 (127-258)||(5413741-5413878)
chr5 (127-273)||(34368384-34368533)
chr5 (148-273)||(28434846-28434972)
chr5 (127-273)||(41105577-41105726)
chr5 (129-272)||(30325883-30326029)
chr5 (127-287)||(37455359-37455525)
chr5 (148-273)||(17537130-17537258)
chr5 (134-255)||(41330407-41330531)
chr5 (130-288)||(34384701-34384862)
chr5 (124-272)||(27592456-27592607)
chr5 (150-259)||(43405431-43405543)
chr5 (199-271)||(42224673-42224745)
chr5 (157-267)||(10253124-10253232)
chr5 (127-288)||(28223783-28223947)
chr5 (127-288)||(28611785-28611949)
chr5 (158-267)||(39246638-39246750)
chr5 (204-261)||(25564033-25564090)
chr5 (214-271)||(40971550-40971607)
chr5 (142-273)||(25710494-25710628)
chr5 (127-233)||(1923559-1923668)
chr5 (210-288)||(2525583-2525661)
chr5 (148-236)||(14553573-14553664)
chr5 (127-242)||(25919266-25919384)
chr5 (226-273)||(1649574-1649621)
chr5 (196-267)||(13456244-13456315)
chr5 (225-271)||(4959304-4959350)
chr5 (214-271)||(6263909-6263966)
chr5 (196-273)||(43541875-43541952)
chr5 (227-271)||(4959391-4959435)
chr5 (236-272)||(7584863-7584899)
chr5 (229-277)||(16875377-16875425)
chr5 (214-270)||(17568799-17568855)
chr5 (174-249)||(31885885-31885963)
chr5 (220-268)||(32050413-32050461)
[»] scaffold0018 (1 HSPs)
scaffold0018 (127-259)||(27850-27985)
[»] scaffold0543 (1 HSPs)
scaffold0543 (198-273)||(9688-9763)
[»] scaffold0492 (1 HSPs)
scaffold0492 (198-273)||(11234-11309)
[»] scaffold0204 (1 HSPs)
scaffold0204 (196-271)||(26941-27016)
[»] scaffold0005 (1 HSPs)
scaffold0005 (217-273)||(296860-296916)
[»] scaffold0838 (1 HSPs)
scaffold0838 (210-268)||(2251-2309)
[»] scaffold0832 (1 HSPs)
scaffold0832 (210-268)||(2282-2340)


Alignment Details
Target: chr4 (Bit Score: 182; Significance: 5e-98; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 182; E-Value: 5e-98
Query Start/End: Original strand, 301 - 622
Target Start/End: Complemental strand, 11127774 - 11127455
Alignment:
Q  301 tagcattcctaaatcttaaatacttattataaagctgaaatagtaacctaactcttttt----atcnnnnnnnggtggagtgtgaaggaaattattatta 396  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    |||       | | |||||||||||||||||||||||    
T  11127774 tagcatttctaaatcttaaatacttattataaagctgaaatagtaacctaactttttttttttatcaaaaaa-gattgagtgtgaaggaaattattatta 11127676  T
Q  397 tttattgatatgatctatttagcaccgacacttctgatcaagggtgtcgtgtccgtgtcaatgctttatagatcagaatataaccgtcatcggatgattt 496  Q
    ||| |||||||||||||||||||||||| ||||||||||||| ||||||     ||||||||||||||||||||| |||||||||| |||||||||||||    
T  11127675 tttgttgatatgatctatttagcaccgaaacttctgatcaagagtgtcg-----gtgtcaatgctttatagatcaaaatataaccgacatcggatgattt 11127581  T
Q  497 gaaatctgcagtacactatcaaacttgtatgatagaacgaaaaccctaatcttaaaaccctaaattaatacctaccttatagattattaccaatcatctc 596  Q
    |||||||| ||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||    
T  11127580 gaaatctgtagtacgctatcaaacttgtatgactgaacgaaaaccctaatcttaaaaccctaaattaatacctaccttatagattattagcaatcatgtc 11127481  T
Q  597 aatnnnnnnnccttaccttgttgatg 622  Q
    |||       ||||||||||||||||    
T  11127480 aataaaaaaaccttaccttgttgatg 11127455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 127 - 288
Target Start/End: Complemental strand, 8109129 - 8108965
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||| ||||||||   |||||||||||| |||||||| | ||||    
T  8109129 caacactctcttttgaacactctctctaatactcactttcttattggtttaaatcattgtgggtctacactttgaaaattgaacaaacacaaattagtgg 8109030  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
     |||||||||||||||| ||| |||||||||||||| |||||||||||||  || ||||||||||    
T  8109029 gacatacattgatttcacccaataaaagagtgagtgctagagagagtgttgaaaagtgagtgttg 8108965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 127 - 288
Target Start/End: Complemental strand, 43771299 - 43771135
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    |||| |||||||||||||||||||| ||||||||||| |||| ||| ||||||||||||| ||||||||   ||||||||||||| ||||| ||||||||    
T  43771299 caacgctctcttttgaacaccctctttaatactcactctcttattggtttaaatcattgtgggtctacactttgaaaattgaacccacacagagtggtgg 43771200  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
     |||||||||||||||||||| |||||||||||||  |||||||||||||  || ||||||||||    
T  43771199 gacatacattgatttcatccaataaaagagtgagtcatagagagagtgttcaaaagtgagtgttg 43771135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 127 - 286
Target Start/End: Complemental strand, 722330 - 722168
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    ||||||| |||||||||||| |||||||||||||||| |||| ||| ||||||||||||| ||||||||   | ||||||||||  ||||||||||||||    
T  722330 caacactttcttttgaacactctctctaatactcactctcttattggtttaaatcattgtgggtctacactttaaaaattgaacttacacaaagtggtgg 722231  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgt 286  Q
     |||||| ||||||||||||| ||||| |||||||| |||||||||||||  ||| |||||||    
T  722230 gacatactttgatttcatccaataaaaaagtgagtgctagagagagtgttgaaagatgagtgt 722168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 127 - 288
Target Start/End: Complemental strand, 39471330 - 39471166
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    |||||||||||||| ||||  |||||||||||||||| |||| ||| ||||||||||||| ||||||||   |||| |||||||||||||||||||||||    
T  39471330 caacactctcttttaaacattctctctaatactcactctcttattggtttaaatcattgtgggtctacactttgaagattgaaccaacacaaagtggtgg 39471231  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
     |||||||||||||||||| | |||||||||  |||||| ||||||| ||  || ||||||||||    
T  39471230 gacatacattgatttcatctaataaaagagttggtgttaaagagagtatttaaaagtgagtgttg 39471166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 128 - 287
Target Start/End: Complemental strand, 50164567 - 50164405
Alignment:
Q  128 aacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggc 224  Q
    |||||| |||||||||||| ||||||||| ||||||||||| ||| |||||||||||||  |||||||   |||||||||||||  |||||| ||||||     
T  50164567 aacactatcttttgaacactctctctaatgctcactttcttattggtttaaatcattgtgagtctacactttgaaaattgaacccccacaaaatggtggg 50164468  T
Q  225 acatacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgtt 287  Q
    | |||||||||||| ||||| |||| ||||||||| |||||||||||||| || |||||||||    
T  50164467 agatacattgattttatccaataaatgagtgagtgctagagagagtgttaaaaagtgagtgtt 50164405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 127 - 273
Target Start/End: Original strand, 754587 - 754736
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    ||||||| |||||||||||| |||||||||||||||| |||| ||| ||||||||||||| ||||||||   | ||||||||||  ||||||||||||||    
T  754587 caacactttcttttgaacactctctctaatactcactctcttattggtttaaatcattgtgggtctacactttaaaaattgaacttacacaaagtggtgg 754686  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
     |||||| |||| |||||||| ||||| ||||||||||||||| ||||||    
T  754687 gacatactttgagttcatccaataaaaaagtgagtgttagagaaagtgtt 754736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 127 - 273
Target Start/End: Complemental strand, 20454711 - 20454564
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    ||||| |||||||||||||| |||||||| ||||||| | || ||||||||||||||||| | ||||||   ||||||||||||||||||||||| ||||    
T  20454711 caacattctcttttgaacactctctctaacactcactctgttattgatttaaatcattgtggatctacactttgaaaattgaaccaacacaaagt-gtgg 20454613  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
     |||||||||||||| ||| | |||||||||||||| |||||||||||||    
T  20454612 -acatacattgattttatctaataaaagagtgagtgctagagagagtgtt 20454564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 127 - 288
Target Start/End: Complemental strand, 24834751 - 24834587
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    |||||||||||||| ||| | |||||||||| ||||| |||| ||| ||||||| ||||| ||||||||   ||||||||||||| ||||||| ||||||    
T  24834751 caacactctcttttaaactctctctctaatagtcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacccacacaaaatggtgg 24834652  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
     ||||||||||||| |||||| |||||  ||||| |||||||||||||| | || ||||||||||    
T  24834651 gacatacattgattccatccaataaaaatgtgagcgttagagagagtgtcaaaaagtgagtgttg 24834587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 127 - 273
Target Start/End: Complemental strand, 47009362 - 47009213
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||   ||||||   ||||||||||||  |||||||| ||||     
T  47009362 caacattctcttttgaacaccctctctaatactcactttcttattggtttaaatcattgtgtatctacactttgaaaattgaactcacacaaagcggtga 47009263  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
     ||| ||||| |||| ||||| |||||||||||||| |||| ||||||||    
T  47009262 gacaaacattaattttatccaataaaagagtgagtgctagaaagagtgtt 47009213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 127 - 255
Target Start/End: Original strand, 26361315 - 26361446
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    |||||||||||||||||||||||||||||||||||||  ||| ||| ||||||||||| | ||||||||   |||| |||||||| ||||||| ||||||    
T  26361315 caacactctcttttgaacaccctctctaatactcactcacttattggtttaaatcattatgggtctacactttgaatattgaacccacacaaaatggtgg 26361414  T
Q  224 cacatacattgatttcatccagtaaaagagtg 255  Q
      |||||||||| |||||||| ||||||||||    
T  26361415 gtcatacattgacttcatccaataaaagagtg 26361446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 11128035 - 11127963
Alignment:
Q  1 caaactcccaattatcagcaccaagacctgaattttcccccatcgcagattactatcactaaacacgaaaaca 73  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  11128035 caaactcccaattatcagcaccaagacctgaattttcccccatggcagattactatcactaaaaacgaaaaca 11127963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 127 - 287
Target Start/End: Complemental strand, 49242343 - 49242180
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    |||||||||||||| ||||| |||| | ||||||| | |||| ||| |||||||||||||   ||||||   ||||||||||||| |||||||||| |||    
T  49242343 caacactctcttttaaacactctctatgatactcattctcttattggtttaaatcattgtgaatctacacattgaaaattgaacccacacaaagtgatgg 49242244  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgtt 287  Q
     ||||| |||||||||||||| | ||| ||||| ||||||| ||||||||  || |||||||||    
T  49242243 gacatatattgatttcatccaattaaaaagtgactgttagatagagtgttcaaaagtgagtgtt 49242180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 127 - 270
Target Start/End: Original strand, 34129407 - 34129553
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    |||||||||||| |||||||  ||||||||||||||| | || ||| |||||| ||||||  ||| |||   ||||||||||||  ||||||||||||||    
T  34129407 caacactctcttctgaacacaatctctaatactcactcttttattggtttaaaccattgtgagtccacactttgaaaattgaacacacacaaagtggtgg 34129506  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagt 270  Q
     | |||||||||| ||||||| || ||||||||||| ||||||||||    
T  34129507 gatatacattgatctcatccaatagaagagtgagtgctagagagagt 34129553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 135 - 260
Target Start/End: Original strand, 24938430 - 24938558
Alignment:
Q  135 tcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacataca 231  Q
    |||||| |||||  ||||||||||| ||| |||| ||| ||||||||||||||||||||||   | ||||||||| | | ||||| |||||| |||||||    
T  24938430 tcttttcaacactttctctaatacttactctcttattggtttaaatcattgtaggtctacactttaaaaattgaatccaaacaaaatggtgggacataca 24938529  T
Q  232 ttgatttcatccagtaaaagagtgagtgt 260  Q
    |||||| |||||| |||||||||||||||    
T  24938530 ttgattacatccaataaaagagtgagtgt 24938558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 127 - 267
Target Start/End: Complemental strand, 19447305 - 19447161
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggt-ctaca---tgaaaattgaaccaacacaaagtggtg 222  Q
    |||||||||||||||||||| |||| ||||||||||| |||  |||| |||||||||||| ||| || ||   ||||||| ||||| ||| |||||||||    
T  19447305 caacactctcttttgaacactctctttaatactcactctctaattgagttaaatcattgtcggtcctgcattttgaaaatggaacccacataaagtggtg 19447206  T
Q  223 gcacatacattgatttcatccagtaaaagagtgagtgttagagag 267  Q
    | |||||||||| ||||| ||| ||| |||||| ||||| |||||    
T  19447205 ggacatacattggtttcacccaataagagagtgggtgtttgagag 19447161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 127 - 244
Target Start/End: Original strand, 45310955 - 45311075
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    ||||| ||||||||||||   |||||||||||| ||| |||| |||||||||||||||||| |||| ||   ||||||||||| |  |||||||||||||    
T  45310955 caacattctcttttgaactgactctctaatacttactctcttattgatttaaatcattgtaagtcttcactttgaaaattgaatccccacaaagtggtgg 45311054  T
Q  224 cacatacattgatttcatcca 244  Q
     ||||| ||||||||||||||    
T  45311055 gacatatattgatttcatcca 45311075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 127 - 288
Target Start/End: Original strand, 40991596 - 40991760
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca--tga-aaattgaaccaacacaaagtggtgg 223  Q
    ||||||| | |||||||||| |||||| ||||||||| | || ||| ||||||||||||| ||||||||  | | |||| |  |||| |||| | |||||    
T  40991596 caacacttttttttgaacactctctctgatactcactcttttattggtttaaatcattgtgggtctacacttcagaaatagtgccaatacaatggggtgg 40991695  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
     ||||| |||||||||||||| | |||||||||||| |||||||||||||  || ||||||||||    
T  40991696 gacatatattgatttcatccaatgaaagagtgagtgatagagagagtgttgaaaagtgagtgttg 40991760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 127 - 254
Target Start/End: Complemental strand, 22542554 - 22542424
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    ||||||| |||||||||||| || | ||||||||||| |||| ||  ||||||||||||| || |||     ||||||||||||| ||||||||||||||    
T  22542554 caacactatcttttgaacactctttttaatactcactctcttattagtttaaatcattgtgggactattctttgaaaattgaacccacacaaagtggtgg 22542455  T
Q  224 cacatacattgatttcatccagtaaaagagt 254  Q
     |||||| |||||||||| || |||||||||    
T  22542454 aacatactttgatttcattcaataaaagagt 22542424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 142 - 273
Target Start/End: Original strand, 33653511 - 33653645
Alignment:
Q  142 aacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctacat---gaaaattgaaccaacacaaagtggtggcacatacattgattt 238  Q
    ||||| ||||||||||||||||||||| ||| ||||||||||||| | || | ||   |||||||||| |  |||||| |||||| ||||||||||||||    
T  33653511 aacactctctctaatactcactttcttattggtttaaatcattgtggatcaatattttgaaaattgaaaccccacaaaatggtgggacatacattgattt 33653610  T
Q  239 catccagtaaaagagtgagtgttagagagagtgtt 273  Q
    |||| | |||| |||||| |  |||||||||||||    
T  33653611 catcaaataaatgagtgattaatagagagagtgtt 33653645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 131 - 272
Target Start/End: Original strand, 25719123 - 25719268
Alignment:
Q  131 actctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtc-tacat---gaaaattgaaccaacacaaagtggtggcac 226  Q
    |||||||||||||||   ||||||||||||||| |||  |||  |||||||||||| |||| |||||   | ||||  |||| ||| |||||||||| ||    
T  25719123 actctcttttgaacaatttctctaatactcactctctgattgggttaaatcattgtgggtcctacattttggaaatgaaacccacataaagtggtgggac 25719222  T
Q  227 atacattgatttcatccagtaaaagagtgagtgttagagagagtgt 272  Q
    |||||||||||||| ||| ||| |||||||||||| ||||||||||    
T  25719223 atacattgatttcaaccaataagagagtgagtgtttgagagagtgt 25719268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 196 - 271
Target Start/End: Original strand, 48339419 - 48339494
Alignment:
Q  196 tgaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtg 271  Q
    ||||||||||||| |||||||||||||| ||||||||||||||  |||| ||| ||||||||||||| ||||||||    
T  48339419 tgaaaattgaacccacacaaagtggtggaacatacattgatttattccaataagagagtgagtgttaaagagagtg 48339494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 127 - 267
Target Start/End: Complemental strand, 13070114 - 13069971
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtc-taca---tgaaaattgaaccaacacaaagtggtg 222  Q
    |||||||||||||||||||   ||||||| ||||||| | || |||| | |||||| |||||| | ||||   ||||||| ||||| ||| |||||||||    
T  13070114 caacactctcttttgaacattttctctaacactcactcttttattgagtaaaatcaatgtaggacctacactttgaaaatggaacccacataaagtggtg 13070015  T
Q  223 gcacatacattgatttcatccagtaaaagagtgagtgttagagag 267  Q
    | |||||||||||||||| ||| |||||||||||||| |||||||    
T  13070014 gaacatacattgatttca-ccaataaaagagtgagtgctagagag 13069971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 138 - 264
Target Start/End: Complemental strand, 29699650 - 29699522
Alignment:
Q  138 tttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca--tgaaaattgaaccaacacaaagtggtggcacatacattga 235  Q
    |||| |||| || ||||||| ||||| |||| ||| ||||||||||||| || ||| |  |  |||| |||||||||||||||||||| ||||  |||||    
T  29699650 tttgtacactctatctaatattcactctcttattgttttaaatcattgtcgggctatactttgaaatagaaccaacacaaagtggtgggacatgtattga 29699551  T
Q  236 tttcatccagtaaaagagtgagtgttaga 264  Q
    ||||||||| |||||||||||||| ||||    
T  29699550 tttcatccaataaaagagtgagtgctaga 29699522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 153 - 261
Target Start/End: Original strand, 50652369 - 50652479
Alignment:
Q  153 taatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaa 249  Q
    ||||| |||||||||| ||||||||||| |||||| |||||||   ||||||||||||| |||||||||||||  | |||||||||||| || || ||||    
T  50652369 taatattcactttcttattgatttaaattattgtacgtctacattttgaaaattgaacctacacaaagtggtgagatatacattgattttatgcaataaa 50652468  T
Q  250 agagtgagtgtt 261  Q
    || |||||||||    
T  50652469 ag-gtgagtgtt 50652479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 128 - 273
Target Start/End: Complemental strand, 49077421 - 49077273
Alignment:
Q  128 aacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggc 224  Q
    ||||||||||||| |||||| |||  | ||||||   |||| ||| ||||||||||||| ||||||||   | ||||||||||| ||||||||||||||     
T  49077421 aacactctcttttaaacaccttcttgagtactcaaactcttattggtttaaatcattgtgggtctacactttaaaaattgaacccacacaaagtggtggg 49077322  T
Q  225 acatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    ||||| ||| |||| ||| | ||||||| |||||| || ||||| ||||    
T  49077321 acatatattaattttatctaataaaagaatgagtgctaaagagaatgtt 49077273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 291
Target Start/End: Original strand, 46242000 - 46242116
Alignment:
Q  176 taaatcattgtaggtctacat---gaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgt 272  Q
    ||||||||||| |||||| ||   |||||||||||| ||||||| |||||| ||||||| |||||||||||  |||||| ||||  |||  |||||||||    
T  46242000 taaatcattgtgggtctatattttgaaaattgaacctacacaaaatggtgggacatacaatgatttcatcccataaaagtgtga--gttctagagagtgt 46242097  T
Q  273 tagaaggtgagtgttgata 291  Q
    || || |||||||||||||    
T  46242098 taaaaagtgagtgttgata 46242116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 214 - 291
Target Start/End: Original strand, 47237838 - 47237915
Alignment:
Q  214 aaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttgata 291  Q
    |||||||||| ||||| |||||||||||||| ||||||||||| || |||||||||||||  || | |||||||||||    
T  47237838 aaagtggtgggacatatattgatttcatccaataaaagagtgaatgctagagagagtgttcaaaagagagtgttgata 47237915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 196 - 271
Target Start/End: Original strand, 42862500 - 42862575
Alignment:
Q  196 tgaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtg 271  Q
    ||||||| ||||| ||| |||||||||| |||||||||||||||| ||| ||||| |||||||| |||||| ||||    
T  42862500 tgaaaatggaacccacataaagtggtgggacatacattgatttcacccaataaaaaagtgagtgctagagaaagtg 42862575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 21776942 - 21777000
Alignment:
Q  214 aaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgt 272  Q
    |||||||| | |||||||||||||| ||||| ||||||||||| |||||||||||||||    
T  21776942 aaagtggtaggacatacattgattttatccaataaaagagtgaatgttagagagagtgt 21777000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 199 - 273
Target Start/End: Complemental strand, 22592402 - 22592328
Alignment:
Q  199 aaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    |||| ||||| |||||||||||||| ||| ||||| |||||||||| ||||||||||||||  ||||||| ||||    
T  22592402 aaatagaacctacacaaagtggtgggacaaacatttatttcatccaataaaagagtgagtgccagagagaatgtt 22592328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 127 - 267
Target Start/End: Original strand, 10169652 - 10169795
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctacat---gaaaattgaaccaacacaaagtggtgg 223  Q
    ||||||||| |||| |||| ||| | ||||| ||||| |||| ||| ||||||| ||||| | ||||  |   |||||||||||  |||||||||||| |    
T  10169652 caacactctttttttaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtag 10169751  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagag 267  Q
     ||||| |||||||||||||| ||| ||||||| | ||||||||    
T  10169752 gacatatattgatttcatccaataatagagtgaatattagagag 10169795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 228 - 273
Target Start/End: Original strand, 16178697 - 16178742
Alignment:
Q  228 tacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||    
T  16178697 tacattgatttcatccaataaaagagtgagagttagagagagtgtt 16178742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 196 - 273
Target Start/End: Original strand, 33996014 - 33996091
Alignment:
Q  196 tgaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    ||||||||||||| ||| |||||||||  |||||||||||||| ||  | ||||||||||| |||||||||| |||||    
T  33996014 tgaaaattgaacccacaaaaagtggtgagacatacattgatttgatttaataaaagagtgaatgttagagagtgtgtt 33996091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 214 - 270
Target Start/End: Original strand, 2088762 - 2088818
Alignment:
Q  214 aaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagt 270  Q
    |||||||||| ||||||||||||||||  || | |||||||||||||||||||||||    
T  2088762 aaagtggtgggacatacattgatttcactcaattaaagagtgagtgttagagagagt 2088818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 249
Target Start/End: Original strand, 31250933 - 31251015
Alignment:
Q  170 ttgatttaaatcattgtaggtctacat---gaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaa 249  Q
    ||||||||||||||||| |||||||||   |||||||||||   || ||| |||||| |||||||||||||||||||| ||||    
T  31250933 ttgatttaaatcattgtgggtctacattttgaaaattgaacgtccataaaatggtgggacatacattgatttcatccaataaa 31251015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 165 - 267
Target Start/End: Original strand, 20225386 - 20225491
Alignment:
Q  165 tcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgtt 261  Q
    |||| ||| |||||||||||||  |||||||   || |||| ||||| ||| |||||||||| |||| ||| |||| |||||| |||||||||||||| |    
T  20225386 tcttattggtttaaatcattgtgagtctacactttggaaatagaacccacaaaaagtggtgggacatgcatggattccatccaataaaagagtgagtgct 20225485  T
Q  262 agagag 267  Q
    ||||||    
T  20225486 agagag 20225491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 37315643 - 37315589
Alignment:
Q  214 aaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtg 271  Q
    |||||||||| |||||||||||||||| |||   ||||||||||||||||||||||||    
T  37315643 aaagtggtgggacatacattgatttcaccca---aaagagtgagtgttagagagagtg 37315589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 218 - 273
Target Start/End: Complemental strand, 39016742 - 39016687
Alignment:
Q  218 tggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    |||||| |||||||||||||||||||| ||||| ||| ||||||| ||||||||||    
T  39016742 tggtgggacatacattgatttcatccaataaaatagtaagtgttatagagagtgtt 39016687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 256
Target Start/End: Complemental strand, 11127854 - 11127794
Alignment:
Q  196 tgaaaatt-gaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtga 256  Q
    |||||||| ||||||| |||||||||||| |||||||||||||||||||  |||||||||||    
T  11127854 tgaaaattagaaccaatacaaagtggtgg-acatacattgatttcatcccataaaagagtga 11127794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 165
Target Start/End: Complemental strand, 11127894 - 11127854
Alignment:
Q  124 tatcaacactctcttttgaacaccctctctaatactcacttt 165  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  11127894 tatcaacactct-ttttgaacaccctctctaatactcacttt 11127854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 259
Target Start/End: Original strand, 50481584 - 50481687
Alignment:
Q  159 tcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtg 255  Q
    ||||| |||| ||| ||||||| |||||  |||||||   ||||||| ||| | | |||||||||||  |||||| ||||||||||||| ||||||||||    
T  50481584 tcactctcttattggtttaaatgattgtgtgtctacactttgaaaatagaaaccatacaaagtggtgagacatactttgatttcatccaataaaagagtg 50481683  T
Q  256 agtg 259  Q
    ||||    
T  50481684 agtg 50481687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 273
Target Start/End: Complemental strand, 50571965 - 50571888
Alignment:
Q  196 tgaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    ||||||||||| | ||| ||| || |||  ||||||||||||||||| | ||||||||| |||| |||||||||||||    
T  50571965 tgaaaattgaagccacataaattgatggggcatacattgatttcatctaataaaagagtaagtgctagagagagtgtt 50571888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 16178681 - 16178610
Alignment:
Q  199 aaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtg 271  Q
    |||| ||||| ||| |||||||||| ||||||||||||||||  || | |||||||||||| |||||||||||    
T  16178681 aaatggaacccacataaagtggtgggacatacattgatttcactcaat-aaagagtgagtgctagagagagtg 16178610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 273
Target Start/End: Complemental strand, 27654560 - 27654501
Alignment:
Q  214 aaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    |||||||||| |||||||||  ||| ||||| ||| ||| ||||||||||||||||||||    
T  27654560 aaagtggtgggacatacattagttttatccaataagagaatgagtgttagagagagtgtt 27654501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 185
Target Start/End: Original strand, 37451023 - 37451078
Alignment:
Q  130 cactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattg 185  Q
    ||||||||||| |||||| ||||||||||||||| | || ||| ||||||||||||    
T  37451023 cactctcttttaaacaccttctctaatactcactcttttattggtttaaatcattg 37451078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 270
Target Start/End: Original strand, 41153280 - 41153351
Alignment:
Q  199 aaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagt 270  Q
    |||| ||||| |||||||||||||| |||| |||  |||||||||| ||||||||| |||| || |||||||    
T  41153280 aaatagaacctacacaaagtggtgggacatgcatgaatttcatccaataaaagagtaagtgataaagagagt 41153351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 257
Target Start/End: Original strand, 43124607 - 43124654
Alignment:
Q  210 acacaaagtggtggcacatacattgatttcatccagtaaaagagtgag 257  Q
    ||||||| |||||| |||||||||||||||||||| |||| |||||||    
T  43124607 acacaaaatggtgggacatacattgatttcatccattaaatgagtgag 43124654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 51206157 - 51206200
Alignment:
Q  228 tacattgatttcatccagtaaaagagtgagtgttagagagagtg 271  Q
    ||||||||||||| ||| |||||||||||||| |||||||||||    
T  51206157 tacattgatttcacccaataaaagagtgagtgctagagagagtg 51206200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 127 - 165
Target Start/End: Complemental strand, 5545752 - 5545714
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcacttt 165  Q
    |||||||||||||||||||| |||||||||||| |||||    
T  5545752 caacactctcttttgaacactctctctaatacttacttt 5545714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 127 - 259
Target Start/End: Complemental strand, 38636508 - 38636375
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    ||||||||| |||||| |||  ||||||||| | | |||||| ||||| ||||||||||| | ||||||   | ||||||  ||| ||| ||||| |||     
T  38636508 caacactcttttttgaccac--tctctaatatttattttcttattgatataaatcattgtggatctacactttaaaaattagacccacataaagtagtga 38636411  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtg 259  Q
     |||||||||||||| ||| | ||||||||||||||    
T  38636410 gacatacattgattttatcaaataaaagagtgagtg 38636375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 273
Target Start/End: Complemental strand, 40812103 - 40812061
Alignment:
Q  231 attgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    |||||||||| ||| |||||||||||||| |||||||||||||    
T  40812103 attgatttcacccaataaaagagtgagtgctagagagagtgtt 40812061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 18421922 - 18421984
Alignment:
Q  210 acacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtta 274  Q
    ||||| |||||||| |||||||||||||||||| | ||||| |||  |||||||||| |||||||    
T  18421922 acacacagtggtgggacatacattgatttcatctaataaaaaagt--gtgttagagaaagtgtta 18421984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 277
Target Start/End: Complemental strand, 30111828 - 30111787
Alignment:
Q  236 tttcatccagtaaaagagtgagtgttagagagagtgttagaa 277  Q
    ||||||||| ||| | ||||||||||||||||||||||||||    
T  30111828 tttcatccaataagaaagtgagtgttagagagagtgttagaa 30111787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 277
Target Start/End: Complemental strand, 37422958 - 37422921
Alignment:
Q  240 atccagtaaaagagtgagtgttagagagagtgttagaa 277  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  37422958 atccaataaaagagtgagtattagagagagtgttagaa 37422921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 38537520 - 38537577
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcatt 184  Q
    ||||||| |||||||||||| |||||||||| ||| | | || |||||||||||||||    
T  38537520 caacactttcttttgaacactctctctaataatcattcttttattgatttaaatcatt 38537577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 203 - 271
Target Start/End: Original strand, 2187899 - 2187967
Alignment:
Q  203 tgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtg 271  Q
    |||||| ||| |||||||||| |||| ||||||||||| ||| |||||||| ||  | |||||||||||    
T  2187899 tgaacccacataaagtggtgggacattcattgatttcacccaataaaagagcgaaagctagagagagtg 2187967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 214 - 262
Target Start/End: Complemental strand, 48608163 - 48608115
Alignment:
Q  214 aaagtggtggcacatacattgatttcatccagtaaaagagtgagtgtta 262  Q
    |||||||||| ||||||||| |||| ||||| ||||||||||| |||||    
T  48608163 aaagtggtgggacatacattaattttatccaataaaagagtgaatgtta 48608115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 252 - 288
Target Start/End: Original strand, 53870998 - 53871034
Alignment:
Q  252 agtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  53870998 agtgagtgttagagagagtgttggaaagtgagtgttg 53871034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 104; Significance: 2e-51; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 127 - 273
Target Start/End: Complemental strand, 34905509 - 34905360
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||| ||||||||   ||||||||||||| | ||||||||||||    
T  34905509 caacactctcttttgaacaccctctctaatactcactctcttattggtttaaatcattgtgggtctacactttgaaaattgaacccaaacaaagtggtgg 34905410  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
     |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  34905409 gacatacattgatttcatccaataaaagagtgagtgttagagagagtgtt 34905360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 127 - 287
Target Start/End: Complemental strand, 5106471 - 5106308
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    |||||| ||||||||||||| |||||||||| ||||| | || ||| |||||||| |||| ||| ||||   |||||||||| || ||||||||||||||    
T  5106471 caacaccctcttttgaacacactctctaatattcactctattattggtttaaatccttgtgggtgtacactttgaaaattgatcccacacaaagtggtgg 5106372  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgtt 287  Q
     |||||||||||||| ||||| ||||| ||||||||||||||| ||||||  || |||||||||    
T  5106371 gacatacattgattttatccaataaaaaagtgagtgttagagaaagtgttgaaaagtgagtgtt 5106308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 124 - 287
Target Start/End: Original strand, 10133162 - 10133328
Alignment:
Q  124 tatcaacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtgg 220  Q
    |||||||||||||||||||| || | || ||||||||||| | || ||| ||||||||||||| | ||||||   |||||||||||||  || |||||||    
T  10133162 tatcaacactctcttttgaatactcactttaatactcactcttttattggtttaaatcattgtggttctacactttgaaaattgaacccccataaagtgg 10133261  T
Q  221 tggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgtt 287  Q
    ||| ||||||| | |||||||||| |||| |||||||||||||||||||||||  || |||||||||    
T  10133262 tgggacatacaataatttcatccaataaatgagtgagtgttagagagagtgttgaaaagtgagtgtt 10133328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 142 - 288
Target Start/End: Original strand, 31116146 - 31116295
Alignment:
Q  142 aacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatacattgattt 238  Q
    ||||| |||||||||||||||| |||| ||| ||||||||||||| ||| ||||   || |||| ||||  ||||||||| |||| ||||||||||||||    
T  31116146 aacactctctctaatactcactctcttattggtttaaatcattgtgggtttacacattggaaatagaacacacacaaagtagtgggacatacattgattt 31116245  T
Q  239 catccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
    |||||| || |||||||| ||||||||||||||||  || ||||||||||    
T  31116246 catccaatagaagagtgaatgttagagagagtgttcaaaagtgagtgttg 31116295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 142 - 273
Target Start/End: Complemental strand, 445976 - 445842
Alignment:
Q  142 aacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatacattgattt 238  Q
    ||||| |||||||||||||| | |||| ||| |||||||||||||   |||| |   ||||||||||||| |||||||||||||  ||||||||||||||    
T  445976 aacactctctctaatactcattctcttattggtttaaatcattgtgactctagactttgaaaattgaacccacacaaagtggtgtgacatacattgattt 445877  T
Q  239 catccagtaaaagagtgagtgttagagagagtgtt 273  Q
    |||||| ||||| |||||||| |||||| ||||||    
T  445876 catccaataaaaaagtgagtgctagagatagtgtt 445842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 127 - 242
Target Start/End: Original strand, 16851980 - 16852098
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    ||||||||||||||||||| |||| ||||||| |||| |||| ||| ||||||||||||| ||||||||   |||||||||||||   ||||||||||||    
T  16851980 caacactctcttttgaacatcctccctaatacccactctcttattggtttaaatcattgtgggtctacactttgaaaattgaacccctacaaagtggtgg 16852079  T
Q  224 cacatacattgatttcatc 242  Q
     ||||||||| ||||||||    
T  16852080 gacatacatttatttcatc 16852098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 134 - 272
Target Start/End: Complemental strand, 21987458 - 21987317
Alignment:
Q  134 ctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatac 230  Q
    ||||||||||||| ||||||||||||||||||||| ||| ||||||||||||  | ||||||   || |||| ||||   || |||||||||| | ||||    
T  21987458 ctcttttgaacactctctctaatactcactttcttattggtttaaatcattgcggatctacactttggaaatagaactcgcataaagtggtgggatatac 21987359  T
Q  231 attgatttcatccagtaaaagagtgagtgttagagagagtgt 272  Q
    |||||||||||||| ||||| |||||||| || |||||||||    
T  21987358 attgatttcatccaataaaatagtgagtgctaaagagagtgt 21987317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 127 - 287
Target Start/End: Complemental strand, 1392800 - 1392640
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    ||||||||||||||||||||||| ||||||||||||| |||| ||| ||||||||||||| || |||||   | ||||||||||  | ||||||| |||     
T  1392800 caacactctcttttgaacaccctatctaatactcactctcttattggtttaaatcattgt-gggctacattttaaaaattgaacacatacaaagtagtga 1392702  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgtt 287  Q
     |||||||||||||||||||| ||||| |  ||||| |  ||||||||||| || |||||||||    
T  1392701 gacatacattgatttcatccaataaaaaatagagtgct--agagagtgttaaaaagtgagtgtt 1392640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 142 - 262
Target Start/End: Complemental strand, 2676053 - 2675930
Alignment:
Q  142 aacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctacat---gaaaattgaaccaacacaaagtggtggcacatacattgattt 238  Q
    ||||| |||||||||||||||||| || ||| |||||| |||||| |||||||||   ||||||| |||| | |||||||||||| ||||||||||| ||    
T  2676053 aacactctctctaatactcacttttttattggtttaaaccattgtgggtctacattttgaaaattaaacctaaacaaagtggtgggacatacattgaatt 2675954  T
Q  239 catccagtaaaagagtgagtgtta 262  Q
    ||| || ||||||||||| |||||    
T  2675953 cattcaataaaagagtgaatgtta 2675930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 12780773 - 12780879
Alignment:
Q  134 ctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatac 230  Q
    |||||||||||||||||||||||| ||| |  ||| ||| ||||||||||||| | ||||||   ||||||||||||||||||||||| |||  ||||||    
T  12780773 ctcttttgaacaccctctctaatattcattcccttattggtttaaatcattgtggatctacactttgaaaattgaaccaacacaaagtagtgagacatac 12780872  T
Q  231 attgatt 237  Q
    |||||||    
T  12780873 attgatt 12780879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 128 - 250
Target Start/End: Original strand, 32112725 - 32112850
Alignment:
Q  128 aacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggc 224  Q
    ||||||||||||||||||  |||||||||| ||||| |||| ||| ||||||||||||| | ||||||   |||||||  |||| ||||||| |||||      
T  32112725 aacactctcttttgaacattctctctaatattcactctcttattgttttaaatcattgtggatctacactttgaaaataaaacccacacaaaatggtgtg 32112824  T
Q  225 acatacattgatttcatccagtaaaa 250  Q
    |||| ||||||||||||||| |||||    
T  32112825 acatgcattgatttcatccaataaaa 32112850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 273
Target Start/End: Complemental strand, 31444132 - 31443983
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    ||||||||||| |||||||  |||||||||| |||| |  |  || ||||||||| ||||  ||| |||   ||||||||||||| ||||||| ||||||    
T  31444132 caacactctctcttgaacattctctctaatattcacgtgttcattaatttaaatccttgtgagtcaacactttgaaaattgaaccgacacaaaatggtgg 31444033  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
     ||||| ||| |||||||||| ||||||| ||||||||| | ||||||||    
T  31444032 aacataaattaatttcatccaataaaagaatgagtgttaaaaagagtgtt 31443983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 127 - 288
Target Start/End: Original strand, 12753767 - 12753931
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    |||||||||||||| ||||| ||||||||||||| || | || ||  |||||||||||||  || ||||   ||||||| ||||| ||||||||||||||    
T  12753767 caacactctcttttcaacactctctctaatactcgctcttttattagtttaaatcattgtgagtgtacaccctgaaaatagaacccacacaaagtggtgg 12753866  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
     |||| |||  |||| ||||| | ||||||||| || || | ||||||||  || ||||||||||    
T  12753867 gacatgcatgtattttatccaatgaaagagtgattgctataaagagtgttcaaaagtgagtgttg 12753931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 127 - 271
Target Start/End: Original strand, 19090221 - 19090369
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtc-taca---tgaaaattgaaccaacacaaagtggtg 222  Q
    |||||||||||||||| ||| |||||||  ||||||| | || ||| || || ||| |||||| | ||||   || |||| ||||| ||| |||||||||    
T  19090221 caacactctcttttgagcactctctctagcactcactcttttattggttgaattcaatgtaggacctacactttggaaatggaacccacataaagtggtg 19090320  T
Q  223 gcacatacattgatttcatccagtaaaagagtgagtgttagagagagtg 271  Q
    | |||||||||||||||| ||| |||||||||| ||| |||||||||||    
T  19090321 ggacatacattgatttcacccaataaaagagtgggtgctagagagagtg 19090369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 196 - 273
Target Start/End: Original strand, 35128802 - 35128879
Alignment:
Q  196 tgaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    ||||||| ||||| ||| |||||||||| |||||||||||||| | ||| ||||||||||| || |||||||||||||    
T  35128802 tgaaaatggaacccacataaagtggtgggacatacattgattttacccaataaaagagtgactgctagagagagtgtt 35128879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 127 - 244
Target Start/End: Original strand, 16187441 - 16187557
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    |||||||||||||| |||||  |||||||||||||||  ||| ||| ||||||| ||||||||||||||   ||||||||||||  ||||||| ||||||    
T  16187441 caacactctcttttcaacac--tctctaatactcactcgcttattggtttaaataattgtaggtctacactttgaaaattgaacttacacaaaatggtgg 16187538  T
Q  224 cacatacattgatttcatcca 244  Q
       |||||||||||| |||||    
T  16187539 --gatacattgatttaatcca 16187557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 127 - 244
Target Start/End: Original strand, 16187659 - 16187775
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    |||||||||||||| |||||  |||||||||||||||  ||| ||| ||||||| ||||||||||||||   ||||||||||||  ||||||| ||||||    
T  16187659 caacactctcttttcaacac--tctctaatactcactcgcttattggtttaaataattgtaggtctacactttgaaaattgaacttacacaaaatggtgg 16187756  T
Q  224 cacatacattgatttcatcca 244  Q
       |||||||||||| |||||    
T  16187757 --gatacattgatttaatcca 16187775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 196 - 273
Target Start/End: Complemental strand, 4595843 - 4595766
Alignment:
Q  196 tgaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    ||||||| ||||| | | |||||||||  ||||||||||||||||  || |||||||||||||| |||||||||||||    
T  4595843 tgaaaatggaacccataaaaagtggtgagacatacattgatttcactcaataaaagagtgagtgctagagagagtgtt 4595766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 149 - 273
Target Start/End: Complemental strand, 32122946 - 32122819
Alignment:
Q  149 tctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatacattgatttcatccag 245  Q
    |||||| || ||||||| || |||  |||||||||||| ||||||||   ||||||||||||   |||||| |||||| ||||| ||||||||||||||     
T  32122946 tctctattattcacttttttattggcttaaatcattgtgggtctacactttgaaaattgaactcccacaaaatggtgggacatatattgatttcatccaa 32122847  T
Q  246 taaaagagtgagtgttagagagagtgtt 273  Q
    ||||  |||||||| | || ||||||||    
T  32122846 taaataagtgagtggtggaaagagtgtt 32122819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 273
Target Start/End: Complemental strand, 10061033 - 10060883
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtc-taca---tgaaaattgaaccaacacaaagtggtg 222  Q
    |||||||||||||||| ||| |||||||| ||||||||| || |||  | | |||| |||||| | ||||   ||||||| ||||| ||| ||||||| |    
T  10061033 caacactctcttttgagcactctctctaacactcacttttttattgggtgagatcaatgtaggacctacactttgaaaatggaacccacataaagtggcg 10060934  T
Q  223 gcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    | ||||||||||||||||   | ||||||||||| ||||| | ||||||||    
T  10060933 ggacatacattgatttcacataataaaagagtgattgttataaagagtgtt 10060883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 174 - 268
Target Start/End: Original strand, 17144725 - 17144822
Alignment:
Q  174 tttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagaga 268  Q
    ||||||||||||| ||||||||   |||||||| |||| |||||||  ||||| ||||| ||||||||||| || ||||| ||| |||| ||||||||    
T  17144725 tttaaatcattgtgggtctacactttgaaaatttaacctacacaaaacggtggaacatatattgatttcattcaataaaatagtaagtgctagagaga 17144822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 199 - 273
Target Start/End: Original strand, 12327287 - 12327361
Alignment:
Q  199 aaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    |||| ||||| ||||||| |||| | |||||||||||||  ||||| ||||||||||| || |||||||||||||    
T  12327287 aaatagaacccacacaaaatggtaggacatacattgattctatccaataaaagagtgactgctagagagagtgtt 12327361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 214 - 270
Target Start/End: Original strand, 6531395 - 6531451
Alignment:
Q  214 aaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagt 270  Q
    ||||| |||| |||||||||||||||| ||| |||||||||||||| | ||||||||    
T  6531395 aaagtagtgggacatacattgatttcacccaataaaagagtgagtgctggagagagt 6531451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 233 - 273
Target Start/End: Original strand, 8441953 - 8441993
Alignment:
Q  233 tgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    |||||||||||| |||| |||||||||||||||||||||||    
T  8441953 tgatttcatccaataaatgagtgagtgttagagagagtgtt 8441993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 233 - 273
Target Start/End: Original strand, 8450757 - 8450797
Alignment:
Q  233 tgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    |||||||||||| |||| |||||||||||||||||||||||    
T  8450757 tgatttcatccaataaatgagtgagtgttagagagagtgtt 8450797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 273
Target Start/End: Complemental strand, 2931660 - 2931585
Alignment:
Q  198 aaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    |||||||||||| |||||| |||| | |||||||||||||||||| | ||||  || || || |||||||||||||    
T  2931660 aaaattgaaccaccacaaaatggtaggacatacattgatttcatcaaataaataagcgaatgatagagagagtgtt 2931585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 273
Target Start/End: Complemental strand, 12690335 - 12690276
Alignment:
Q  214 aaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    |||||||||  |||| |||| |||||||||| ||||||||  ||||||||||||||||||    
T  12690335 aaagtggtgagacatgcattaatttcatccaataaaagagcaagtgttagagagagtgtt 12690276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 273
Target Start/End: Original strand, 373513 - 373558
Alignment:
Q  228 tacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    ||||||||||| ||||| ||||| ||| ||||||||||||||||||    
T  373513 tacattgattttatccaataaaatagtaagtgttagagagagtgtt 373558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 9940427 - 9940382
Alignment:
Q  228 tacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    ||||||||||||| ||| |||||||||||||| |||||||| ||||    
T  9940427 tacattgatttcacccaataaaagagtgagtgctagagagaatgtt 9940382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 8441857 - 8441939
Alignment:
Q  128 aacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaac 207  Q
    |||||| | |||||||||| |||||||||||||||| | || ||| |||| || |||| |||||||||   ||||||||||||    
T  8441857 aacactattttttgaacactctctctaatactcactcttttattggtttagattattgaaggtctacactttgaaaattgaac 8441939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 8450661 - 8450743
Alignment:
Q  128 aacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaac 207  Q
    |||||| | |||||||||| |||||||||||||||| | || ||| |||| || |||| |||||||||   ||||||||||||    
T  8450661 aacactattttttgaacactctctctaatactcactcttttattggtttagattattgaaggtctacactttgaaaattgaac 8450743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 229 - 273
Target Start/End: Original strand, 12488156 - 12488200
Alignment:
Q  229 acattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    |||||||||||||||| ||||||||||||| ||||| | ||||||    
T  12488156 acattgatttcatccaataaaagagtgagtattagaaaaagtgtt 12488200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 227 - 271
Target Start/End: Original strand, 19737545 - 19737589
Alignment:
Q  227 atacattgatttcatccagtaaaagagtgagtgttagagagagtg 271  Q
    |||||||||||||| ||| | |||||||||||| |||||||||||    
T  19737545 atacattgatttcacccaattaaagagtgagtgctagagagagtg 19737589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 32439538 - 32439486
Alignment:
Q  235 atttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgtt 287  Q
    |||||| ||| ||| |||||||||||||||||||||||| ||| | |||||||    
T  32439538 atttcacccaataagagagtgagtgttagagagagtgtttgaaagagagtgtt 32439486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 96; Significance: 1e-46; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 127 - 288
Target Start/End: Complemental strand, 28529424 - 28529262
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||| ||||||||   |||||||||||||  |||| ||||||||    
T  28529424 caacactctcttttgaacaccctctctaatactcactctcttattggtttaaatcattgtgggtctacactttgaaaattgaacc--cacacagtggtgg 28529327  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
     |||||||||||||||||||| |||||||||||||| |||||||||||||  || ||||||||||    
T  28529326 gacatacattgatttcatccaataaaagagtgagtgctagagagagtgttgaaaagtgagtgttg 28529262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 127 - 288
Target Start/End: Original strand, 20493452 - 20493616
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    |||||||||||||||||||| ||||||| |||||||| |||| ||| ||||||||||||| ||||||||   |||| ||||||||  ||||||||||| |    
T  20493452 caacactctcttttgaacactctctctattactcactctcttattggtttaaatcattgtgggtctacactttgaatattgaacccccacaaagtggtag 20493551  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
     |||||||||||||||||||| |||| |||||||||||||||||||||||  || ||||||||||    
T  20493552 gacatacattgatttcatccaataaatgagtgagtgttagagagagtgttgaaaagtgagtgttg 20493616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 127 - 288
Target Start/End: Original strand, 37776710 - 37776874
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    ||||||||| || |||||||||||||||||||||||| ||||  || ||||||||||||||||||||||   ||||||||||||| |||||||||||| |    
T  37776710 caacactcttttatgaacaccctctctaatactcactctcttagtggtttaaatcattgtaggtctacactttgaaaattgaacccacacaaagtggtag 37776809  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
     |||||||||||||||||| | |||||||||||||| | |||| ||||||  || ||||||||||    
T  37776810 gacatacattgatttcatctaataaaagagtgagtgctggagaaagtgttgaaaagtgagtgttg 37776874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 127 - 288
Target Start/End: Original strand, 41451902 - 41452066
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    |||||||||||||||||||| |||||||||||||||| |||| ||| ||||||||||||| |||||||    ||||||||||||| ||||||||||||||    
T  41451902 caacactctcttttgaacactctctctaatactcactctcttattggtttaaatcattgtgggtctactctttgaaaattgaacccacacaaagtggtgg 41452001  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
     |||||| ||||||||||||| |||||||||||||  ||||||  |||||  || ||||||||||    
T  41452002 gacatactttgatttcatccaataaaagagtgagtactagagattgtgttgaaaagtgagtgttg 41452066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 127 - 288
Target Start/End: Complemental strand, 24734878 - 24734714
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    |||||||||||||||||||| |||||||||||||||| |||| ||| ||||||||||||| || ||||    ||||||||||||| ||||||||||||||    
T  24734878 caacactctcttttgaacactctctctaatactcactctcttattggtttaaatcattgtgggcctactctttgaaaattgaacccacacaaagtggtgg 24734779  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
     |||||| ||||||||||||| |||||||||||||  ||||||  |||||  || ||||||||||    
T  24734778 gacatactttgatttcatccaataaaagagtgagtactagagattgtgttgaaaagtgagtgttg 24734714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 127 - 288
Target Start/End: Original strand, 52123963 - 52124127
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||| ||||||||   |||||||||||||  |||||| | ||||    
T  52123963 caacactctcttttgaacactctctctaatactcactttcttattggtttaaatcattgtgggtctacactttgaaaattgaacccccacaaaatagtgg 52124062  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
     ||||||||| ||||||||||  |||  |||||||| ||||||||| |||| || ||||||||||    
T  52124063 gacatacattaatttcatccaacaaataagtgagtgctagagagagcgttaaaaagtgagtgttg 52124127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 134 - 261
Target Start/End: Original strand, 18427164 - 18427294
Alignment:
Q  134 ctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatac 230  Q
    |||| ||||||||||||||||||||||||| |||| ||| ||||||||||||| ||||||||   ||||||| ||||| ||||||| |||||| ||||||    
T  18427164 ctctcttgaacaccctctctaatactcactctcttattggtttaaatcattgtgggtctacactttgaaaatagaacccacacaaaatggtgggacatac 18427263  T
Q  231 attgatttcatccagtaaaagagtgagtgtt 261  Q
    |||||||||||||| |||| |||||||||||    
T  18427264 attgatttcatccaataaatgagtgagtgtt 18427294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 127 - 288
Target Start/End: Original strand, 5452069 - 5452231
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctacat---gaaaattgaaccaacacaaagtggtgg 223  Q
    |||||||||||||||||||| ||||| ||||||| || |||| |||||||||||| |||  ||||||||    |||||||||| | ||||||||||||||    
T  5452069 caacactctcttttgaacactctctccaatactcgctctcttattgatttaaatccttg--ggtctacacttagaaaattgaatccacacaaagtggtgg 5452166  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
     | |||||||||||||||||| ||||||||||| ||||| ||||||||||  || ||||||||||    
T  5452167 gaaatacattgatttcatccaataaaagagtgaatgttaaagagagtgttgaaaagtgagtgttg 5452231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 130 - 272
Target Start/End: Complemental strand, 20791466 - 20791321
Alignment:
Q  130 cactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcac 226  Q
    ||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||  | ||||||   || |||| ||||   || |||||||||| ||    
T  20791466 cactctcttttgaacactctctctaatactcactttcttattggtttaaatcattgcggatctacactttggaaatagaactcgcataaagtggtgggac 20791367  T
Q  227 atacattgatttcatccagtaaaagagtgagtgttagagagagtgt 272  Q
    |||||||||||||||||| ||||| |||||||| || |||||||||    
T  20791366 atacattgatttcatccaataaaatagtgagtgctaaagagagtgt 20791321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 127 - 273
Target Start/End: Complemental strand, 27243219 - 27243069
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtc-taca---tgaaaattgaaccaacacaaagtggtg 222  Q
    |||||||||||||||||||| || ||||||||||||| |||  |||  |||||||| ||| |||| ||||   || |||| ||||| ||| |||||||||    
T  27243219 caacactctcttttgaacactctttctaatactcactctctcattgggttaaatcaatgtgggtcatacactttggaaatggaacccacataaagtggtg 27243120  T
Q  223 gcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    | |||| ||||||||| ||||| ||||||||||||||||||||||||||||    
T  27243119 ggacatgcattgattttatccaataaaagagtgagtgttagagagagtgtt 27243069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 130 - 267
Target Start/End: Complemental strand, 46161117 - 46160977
Alignment:
Q  130 cactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcac 226  Q
    |||||||| ||| |||| |||||||||||||||| |||| ||| ||||||||||| | | ||||||   || |||| |||||||||||||||||| | ||    
T  46161117 cactctctcttggacactctctctaatactcactctcttattggtttaaatcattatggatctacactttggaaatagaaccaacacaaagtggtcggac 46161018  T
Q  227 atacattgatttcatccagtaaaagagtgagtgttagagag 267  Q
    ||  |||||||||||||| |||||||||||||| |||||||    
T  46161017 atgtattgatttcatccaataaaagagtgagtgctagagag 46160977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 174 - 273
Target Start/End: Original strand, 26310500 - 26310602
Alignment:
Q  174 tttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagt 270  Q
    ||||||||||| | ||||||||   ||||||||||||||||| ||| |||||| |||||||||||||||||||| ||||||||| |||| ||||||||||    
T  26310500 tttaaatcattatgggtctacactttgaaaattgaaccaacaaaaaatggtgggacatacattgatttcatccaataaaagagtaagtgctagagagagt 26310599  T
Q  271 gtt 273  Q
    |||    
T  26310600 gtt 26310602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 142 - 267
Target Start/End: Complemental strand, 46450224 - 46450095
Alignment:
Q  142 aacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaa-gtggtggcacatacattgatt 237  Q
    ||||| |||||||||||||||| |||| ||| ||||||||||||| ||||||||   || |||| ||||| ||||||| ||||||| |||||||||||||    
T  46450224 aacactctctctaatactcactctcttattggtttaaatcattgtgggtctacactttgcaaatagaacccacacaaaagtggtgggacatacattgatt 46450125  T
Q  238 tcatccagtaaaagagtgagtgttagagag 267  Q
     |||| | |||||||||||||| |||||||    
T  46450124 ccatctaataaaagagtgagtgctagagag 46450095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 133 - 253
Target Start/End: Original strand, 29588746 - 29588869
Alignment:
Q  133 tctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacata 229  Q
    |||||||||||||| |||| ||| ||||||| |||| ||||||||||||||||| ||||||||   ||||||||||||  ||| ||||||   | |||||    
T  29588746 tctcttttgaacactctctataacactcactctcttattgatttaaatcattgtgggtctacactttgaaaattgaactcacataaagtgaaaggacata 29588845  T
Q  230 cattgatttcatccagtaaaagag 253  Q
    ||||||||| ||||| ||||||||    
T  29588846 cattgattttatccaataaaagag 29588869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 133 - 288
Target Start/End: Complemental strand, 48351603 - 48351445
Alignment:
Q  133 tctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacata 229  Q
    |||||||||||||   ||||||||||||  | |||| ||||||||||||||| | | | ||||   ||||||||||||| ||||||||| |||  |||||    
T  48351603 tctcttttgaacattttctctaatactctttctcttattgatttaaatcattatggatatacactttgaaaattgaacccacacaaagtagtgagacata 48351504  T
Q  230 cattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
     |||||||| ||||| |||||||||| || ||| ||||||||||| ||  |||||||||    
T  48351503 tattgattttatccaataaaagagtgtgtcttaaagagagtgttaaaaactgagtgttg 48351445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 127 - 272
Target Start/End: Complemental strand, 14236192 - 14236044
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    ||||||||| |||||||||| || ||||||||||||||| || ||| | ||||| ||||| | ||||||   || |||| ||||   || ||||||||||    
T  14236192 caacactctgttttgaacactctttctaatactcacttttttattggtctaaattattgtggatctacactttggaaatagaactcgcataaagtggtgg 14236093  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgt 272  Q
     ||||| |||||||||||||| ||||| |||||||| || |||||||||    
T  14236092 gacatatattgatttcatccaataaaatagtgagtgctaaagagagtgt 14236044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 128 - 288
Target Start/End: Complemental strand, 29755672 - 29755509
Alignment:
Q  128 aacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggc 224  Q
    ||||||||||||||||||| | |||||||||  ||  |||| ||| ||||||||||||| | ||||||   ||||||||||||| ||||||||| |||      
T  29755672 aacactctcttttgaacactccctctaatacctaccctcttattggtttaaatcattgttgatctacactttgaaaattgaacccacacaaagtagtgaa 29755573  T
Q  225 acatacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
    ||||| |||||||  || |  |||||||||| |||||| ||||| ||||  || ||||||||||    
T  29755572 acatatattgattctattcgataaaagagtgggtgttaaagagaatgttgaaaagtgagtgttg 29755509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 46237128 - 46237200
Alignment:
Q  199 aaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtg 271  Q
    |||| ||||| ||| |||||||||| |||||||||||||||||||| ||||||||||| || |||||||||||    
T  46237128 aaatggaacccacataaagtggtgggacatacattgatttcatccaataaaagagtgattgctagagagagtg 46237200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 142 - 267
Target Start/End: Complemental strand, 138921 - 138793
Alignment:
Q  142 aacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctacatg---aaaattgaaccaacacaaagtggtggcacatacattgattt 238  Q
    |||||||||| ||||||| ||| | || |||||||||||||||||| || |||||    |||||||||   | ||||| |||||  ||||||||||||||    
T  138921 aacaccctctttaatacttactcttttattgatttaaatcattgtaagtttacattttaaaaattgaatacatacaaaatggtgagacatacattgattt 138822  T
Q  239 catccagtaaaagagtgagtgttagagag 267  Q
    ||| || |||||||||||||| |||||||    
T  138821 cattcaataaaagagtgagtgctagagag 138793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 135 - 288
Target Start/End: Original strand, 45515512 - 45515666
Alignment:
Q  135 tcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacataca 231  Q
    ||||||||| | ||||||||||| ||||| |||| ||| || |||||||  ||||||||||   ||||||||||||  ||||   ||| ||| | |||||    
T  45515512 tcttttgaataacctctctaatattcactctcttattggtt-aaatcata-taggtctacactttgaaaattgaactcacactctgtgatgggatataca 45515609  T
Q  232 ttgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
    ||||||||||||| ||||| |||||||||| |||||||||||| || ||||| ||||    
T  45515610 ttgatttcatccaataaaatagtgagtgttggagagagtgttaaaaagtgagcgttg 45515666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 124 - 241
Target Start/End: Original strand, 50156664 - 50156784
Alignment:
Q  124 tatcaacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtgg 220  Q
    |||| ||||| |||||||||||| || | ||||||||||| |||| ||| ||||||||||||| ||||||||   | |||||||||||  | |||||| |    
T  50156664 tatcgacactttcttttgaacactctttgtaatactcactctcttattggtttaaatcattgtgggtctacacttttaaaattgaacccccgcaaagttg 50156763  T
Q  221 tggcacatacattgatttcat 241  Q
    ||| ||||||||| |||||||    
T  50156764 tggaacatacattaatttcat 50156784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 198 - 271
Target Start/End: Original strand, 41707520 - 41707593
Alignment:
Q  198 aaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtg 271  Q
    ||||||||||| |||||||||| ||  |||||||||||||| ||||| | | ||||||||||||||||||||||    
T  41707520 aaaattgaacccacacaaagtgatgaaacatacattgattttatccaatgagagagtgagtgttagagagagtg 41707593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 196 - 273
Target Start/End: Complemental strand, 46576049 - 46575972
Alignment:
Q  196 tgaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    ||||||| ||||| ||| |||||||||| |||||||||| ||||| ||| ||| |||||||||||| |||||||||||    
T  46576049 tgaaaatggaacccacaaaaagtggtgggacatacattggtttcagccaataagagagtgagtgtttgagagagtgtt 46575972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 148 - 287
Target Start/End: Original strand, 10948588 - 10948730
Alignment:
Q  148 ctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatacattgatttcatcca 244  Q
    |||| ||||||||||| | || ||| ||||||||||||| ||| ||||   | |||||||||| ||||||||||||||| ||||||||| || || ||||    
T  10948588 ctctttaatactcactcttttattggtttaaatcattgtgggtttacactttaaaaattgaacaaacacaaagtggtggaacatacattaatatcgtcca 10948687  T
Q  245 gtaaaagagtgagtgttagagagagtgttagaaggtgagtgtt 287  Q
     ||||  |||||||| | |||| ||||||  || |||||||||    
T  10948688 ataaagaagtgagtgcttgagaaagtgttgaaaagtgagtgtt 10948730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 37600212 - 37600284
Alignment:
Q  199 aaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtg 271  Q
    |||| ||||| ||| |||||||||| |||||||||||||||| ||| |||||||||| ||| |||||||||||    
T  37600212 aaatggaacccacataaagtggtgggacatacattgatttcacccaataaaagagtgggtgctagagagagtg 37600284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 24748976 - 24748933
Alignment:
Q  228 tacattgatttcatccagtaaaagagtgagtgttagagagagtg 271  Q
    ||||||||||||||||| ||||||||||||||||||||||||||    
T  24748976 tacattgatttcatccaataaaagagtgagtgttagagagagtg 24748933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 196 - 267
Target Start/End: Complemental strand, 30624732 - 30624661
Alignment:
Q  196 tgaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagag 267  Q
    ||||||||||||  |||||||||||||  ||||||||| |||| || || ||||||||||||||||||||||    
T  30624732 tgaaaattgaactcacacaaagtggtgaaacatacattaattttattcaataaaagagtgagtgttagagag 30624661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 196 - 271
Target Start/End: Original strand, 54140972 - 54141047
Alignment:
Q  196 tgaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtg 271  Q
    ||||||| ||||| ||  |||||||||| |||||||||||||||| ||| |||| ||||||||| |||||||||||    
T  54140972 tgaaaatggaacccacgtaaagtggtgggacatacattgatttcacccaataaatgagtgagtgctagagagagtg 54141047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 268
Target Start/End: Original strand, 8824986 - 8825130
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    ||||| ||| |||||||||| |||| ||||||||||| |||| ||| ||||||| |||||  || || |   |||||||||||||  || ||| ||||||    
T  8824986 caacattctgttttgaacactctctttaatactcactctcttattggtttaaattattgtgagtgtagactttgaaaattgaacccgcataaaatggtgg 8825085  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagaga 268  Q
     ||||| |||||||||||| | |||||| ||||||  ||||||||    
T  8825086 gacatatattgatttcatctaataaaagggtgagtactagagaga 8825130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 287
Target Start/End: Complemental strand, 22604686 - 22604570
Alignment:
Q  174 tttaaatcattgtaggtctacat---gaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagt 270  Q
    |||||||||||||  ||||||||   |||||||||||   |||||| |||||| ||||||||| |||| ||||| |||| |||||||||||| |||||||    
T  22604686 tttaaatcattgtgagtctacattttgaaaattgaactcccacaaaatggtgggacatacattaattttatccaataaatgagtgagtgttaaagagagt 22604587  T
Q  271 gttagaaggtgagtgtt 287  Q
     ||| || || ||||||    
T  22604586 attaaaaagtaagtgtt 22604570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 199 - 273
Target Start/End: Original strand, 50661604 - 50661678
Alignment:
Q  199 aaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    |||| ||||| ||| |||||||||| |||| ||||||||| ||| | ||||||||| ||||||||||||||||||    
T  50661604 aaatggaacccacataaagtggtgggacatgcattgattttatctaataaaagagtaagtgttagagagagtgtt 50661678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 142 - 258
Target Start/End: Original strand, 55452037 - 55452156
Alignment:
Q  142 aacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatacattgattt 238  Q
    ||||| |||||||||||||||| | |  ||| ||||||||||| |  |||||||   || |||| ||||| |||||||||||||| ||||||||  |||     
T  55452037 aacactctctctaatactcactctttcattggtttaaatcattatgagtctacactttggaaatagaacccacacaaagtggtgggacatacatgtattc 55452136  T
Q  239 catccagtaaaagagtgagt 258  Q
    |||||| |||||||||||||    
T  55452137 catccaataaaagagtgagt 55452156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 13639464 - 13639412
Alignment:
Q  235 atttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgtt 287  Q
    |||||||||| ||||||||||| |||||||||||||||||||| | |||||||    
T  13639464 atttcatccaataaaagagtgactgttagagagagtgttagaaagagagtgtt 13639412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 249
Target Start/End: Original strand, 19345054 - 19345132
Alignment:
Q  174 tttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaa 249  Q
    |||||||||||||  |||||||   |||||||||||||   |||||||||||| |||||||||||||||||||| ||||    
T  19345054 tttaaatcattgtgagtctacaatttgaaaattgaaccccaacaaagtggtgggacatacattgatttcatccaataaa 19345132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 184
Target Start/End: Complemental strand, 43016585 - 43016529
Alignment:
Q  128 aacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcatt 184  Q
    |||||||| |||||||||||| || ||||||||||| |||| |||||||||||||||    
T  43016585 aacactctattttgaacacccactgtaatactcactctcttattgatttaaatcatt 43016529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 127 - 257
Target Start/End: Complemental strand, 2009167 - 2009035
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    ||||| |||||||| |||| ||||||||||| ||| ||| || ||||||||||| |||||  |||||||   | |||| |||| | ||| ||||||||||    
T  2009167 caacattctcttttaaacatcctctctaatattcatttttttattgatttaaattattgtgagtctacactttaaaaactgaaactacataaagtggtgg 2009068  T
Q  224 cacatacattgatttcatccagtaaaagagtgag 257  Q
     ||||||||| ||||||||   ||||||||||||    
T  2009067 -acatacattaatttcatctgataaaagagtgag 2009035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 127 - 273
Target Start/End: Original strand, 15790377 - 15790525
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    ||||||||| ||||||| |  |||||||||||||||| |||| ||| ||||||||||| | || |||||   |||||||||  ||| || ||| |||||     
T  15790377 caacactcttttttgaataatctctctaatactcactctcttattggtttaaatcattat-ggcctacactttgaaaattgtcccaccataaaatggtga 15790475  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
     |||||||||||||| ||||| ||||  ||| ||||||||| | ||||||    
T  15790476 gacatacattgattttatccaataaataagtaagtgttagaaaaagtgtt 15790525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 124 - 195
Target Start/End: Complemental strand, 39186140 - 39186069
Alignment:
Q  124 tatcaacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca 195  Q
    |||||||||||||||||||| || ||||| ||||| | || |||| |||||||||||||||| || ||||||    
T  39186140 tatcaacactctcttttgaatactctctccaataccctctctcttattgatttaaatcattgcagatctaca 39186069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 174 - 288
Target Start/End: Original strand, 40715916 - 40716033
Alignment:
Q  174 tttaaatcattgtaggtctacatg---aaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagt 270  Q
    |||||||||||||| ||| ||||    ||||||||||| |||||||||| ||   |||||||| |||||| |   |||||||||||||| ||||||||||    
T  40715916 tttaaatcattgtatgtcaacattttaaaaattgaacccacacaaagtgatgagtcatacattaatttcaccatataaaagagtgagtgctagagagagt 40716015  T
Q  271 gttagaaggtgagtgttg 288  Q
    |||  || ||||||||||    
T  40716016 gttgaaaagtgagtgttg 40716033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 195
Target Start/End: Original strand, 2419481 - 2419539
Alignment:
Q  137 ttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca 195  Q
    ||||||||||  ||| |||||||||||||||| ||| ||||||||||||| ||||||||    
T  2419481 ttttgaacactttctttaatactcactttcttattggtttaaatcattgtgggtctaca 2419539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 272
Target Start/End: Complemental strand, 13809179 - 13809107
Alignment:
Q  199 aaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgt 272  Q
    |||| ||||| ||| ||| |||||| |||||||||||||| ||||| |||||||||||  ||||||||||||||    
T  13809179 aaatggaacccacataaaatggtgggacatacattgattttatccaataaaagagtga-agttagagagagtgt 13809107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 228 - 277
Target Start/End: Complemental strand, 42780739 - 42780690
Alignment:
Q  228 tacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaa 277  Q
    ||||| ||||||||||| ||| ||| ||||||||||||||||||||||||    
T  42780739 tacatggatttcatccaataagagaatgagtgttagagagagtgttagaa 42780690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 43657093 - 43657150
Alignment:
Q  214 aaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtg 271  Q
    |||||||||| |||||||||||||||||| | ||||| |||||||| |||||| ||||    
T  43657093 aaagtggtgggacatacattgatttcatcaaataaaatagtgagtgctagagaaagtg 43657150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 127 - 269
Target Start/End: Original strand, 24748916 - 24749062
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtc-taca---tgaaaattgaaccaacacaaagtggtg 222  Q
    |||||||||||||||| ||| |||||||| ||||||| | || |||  | |||||| |||||| | ||||   |  |||| ||||| ||| ||| |||||    
T  24748916 caacactctcttttgagcactctctctaacactcactcttttattggatgaaatcaatgtaggacctacactttagaaatggaacccacataaaatggtg 24749015  T
Q  223 gcacatacattgatttcatccagtaaaagagtgagtgttagagagag 269  Q
    | |||||||||||| ||| ||  ||||||| ||||||||||||||||    
T  24749016 ggacatacattgatatcaccccataaaagaatgagtgttagagagag 24749062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 212 - 288
Target Start/End: Original strand, 29389108 - 29389184
Alignment:
Q  212 acaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
    |||||||||||| |||||||||||||| || || | ||||||||||||||| || ||||| |  || ||||||||||    
T  29389108 acaaagtggtgggacatacattgattttattcaatgaaagagtgagtgttaaagtgagtgctcaaaagtgagtgttg 29389184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 286
Target Start/End: Complemental strand, 29235709 - 29235658
Alignment:
Q  235 atttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgt 286  Q
    |||||| ||| ||| |||||||||||||||||||||||||||| | ||||||    
T  29235709 atttcacccaataagagagtgagtgttagagagagtgttagaaagagagtgt 29235658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 38928075 - 38928032
Alignment:
Q  228 tacattgatttcatccagtaaaagagtgagtgttagagagagtg 271  Q
    ||||||||||||| ||| ||||||||||||||||||||| ||||    
T  38928075 tacattgatttcacccaataaaagagtgagtgttagagaaagtg 38928032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 10769822 - 10769879
Alignment:
Q  214 aaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtg 271  Q
    |||||||||| |||||||||||||||| | | |||||||||  ||| |||||||||||    
T  10769822 aaagtggtgggacatacattgatttcaccaaataaaagagtcggtgatagagagagtg 10769879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 49418426 - 49418479
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaat 180  Q
    |||||||||||||||||||  ||||||| || ||||| |||| |||||||||||    
T  49418426 caacactctcttttgaacattctctctagtattcactctcttattgatttaaat 49418479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 286
Target Start/End: Original strand, 54187050 - 54187099
Alignment:
Q  237 ttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgt 286  Q
    |||| ||| ||| |||||||||||||||||||||||||||| | ||||||    
T  54187050 ttcacccaataagagagtgagtgttagagagagtgttagaaagagagtgt 54187099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 199 - 259
Target Start/End: Original strand, 21232604 - 21232664
Alignment:
Q  199 aaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtg 259  Q
    |||| ||||| ||| |||||||||| |||||||||||||||| ||| ||||| | ||||||    
T  21232604 aaatggaacccacataaagtggtggaacatacattgatttcacccaataaaaaaatgagtg 21232664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 127 - 163
Target Start/End: Original strand, 27243054 - 27243090
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcact 163  Q
    |||||||||||||||||||| |||||||| |||||||    
T  27243054 caacactctcttttgaacactctctctaacactcact 27243090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 137 - 208
Target Start/End: Original strand, 29388611 - 29388685
Alignment:
Q  137 ttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaacc 208  Q
    |||||||||| |||||||| || |||| |||| |||| ||||||||||||  |||||||   |||||||||||||    
T  29388611 ttttgaacactctctctaacacccactctcttattgacttaaatcattgtgagtctacactttgaaaattgaacc 29388685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 36751028 - 36750960
Alignment:
Q  205 aaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    |||| ||| |||||||| | |||| || ||||||||| |||||| |||||||||||||  |||||||||    
T  36751028 aacctacataaagtggtaggacatgcactgatttcattcagtaagagagtgagtgttaatgagagtgtt 36750960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 48543262 - 48543314
Alignment:
Q  235 atttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgtt 287  Q
    |||||| ||| ||| |||||||||||| ||||||||||||||| | |||||||    
T  48543262 atttcacccaataagagagtgagtgttggagagagtgttagaaagagagtgtt 48543314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 52951475 - 52951531
Alignment:
Q  232 ttgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
    ||||||||||||| | | |||||||||| |||||||||||||| || | ||||||||    
T  52951475 ttgatttcatccaatgagagagtgagtgctagagagagtgttaaaaagagagtgttg 52951531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 88; Significance: 6e-42; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 127 - 273
Target Start/End: Complemental strand, 22190112 - 22189963
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    |||||||||||||||||||||||||||||||||||||   || ||| ||||||||||||  ||||||||   ||||||||||||| ||||||||||||||    
T  22190112 caacactctcttttgaacaccctctctaatactcactcgtttattggtttaaatcattgcgggtctacactttgaaaattgaacccacacaaagtggtgg 22190013  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
      ||||||||||||||||||| |||||||||||||| |||||||||||||    
T  22190012 gccatacattgatttcatccaataaaagagtgagtgctagagagagtgtt 22189963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 127 - 269
Target Start/End: Complemental strand, 11824242 - 11824099
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||| ||| ||||   ||||||||||| | ||||||| ||||||    
T  11824242 caacactctcttttgaacac--tctctaatactcactttcttattgatttaaatcattgtgggtttacactttgaaaattgaagctacacaaaatggtgg 11824145  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagag 269  Q
     |||||||||||||||||||| |||||||||||||| |||||||||    
T  11824144 gacatacattgatttcatccaataaaagagtgagtgctagagagag 11824099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 127 - 288
Target Start/End: Complemental strand, 27949446 - 27949282
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    |||||||||||||||||||| |||||||||||||||| |||| ||  ||||||||||||| ||||||||   ||||| ||||||  ||||||| |||| |    
T  27949446 caacactctcttttgaacactctctctaatactcactctcttattagtttaaatcattgtgggtctacactttgaaatttgaactcacacaaaatggtag 27949347  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
     |||||  ||||||||||||| || |||||||||||||||||||||||||| || ||||||||||    
T  27949346 gacataacttgatttcatccaatacaagagtgagtgttagagagagtgttaaaaagtgagtgttg 27949282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 127 - 288
Target Start/End: Complemental strand, 27888455 - 27888291
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    |||||||||||||||| ||| |||||||| ||||||| |||| ||| ||||||||||||| ||||||||   | ||||||||||| ||||||||||||||    
T  27888455 caacactctcttttgagcactctctctaacactcactctcttattggtttaaatcattgtgggtctacactttaaaaattgaacccacacaaagtggtgg 27888356  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
     |||||||||||||| ||||| | | || ||||||||||||||||||| |  || ||||||||||    
T  27888355 gacatacattgattttatccaatgagagggtgagtgttagagagagtgctcaaaagtgagtgttg 27888291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 127 - 267
Target Start/End: Complemental strand, 11692352 - 11692209
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    |||||||||||||||||||| |||||||||||||||| || | ||  ||||||||| |||  || ||||   ||||||||||||| |||||||||||| |    
T  11692352 caacactctcttttgaacacactctctaatactcactctcatattagtttaaatcactgtgagtttacactttgaaaattgaacctacacaaagtggtag 11692253  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagag 267  Q
     |||||||||||||||||||| ||||||||||| | ||||||||    
T  11692252 gacatacattgatttcatccaataaaagagtgaatattagagag 11692209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 127 - 287
Target Start/End: Original strand, 32212877 - 32213039
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctacatg---aaaattgaaccaacacaaagtggtgg 223  Q
    ||||||||||||||||||||||| | ||||||||||| |||| ||| ||||||||||||| || ||||||    ||||||||||  | ||||||| |||     
T  32212877 caacactctcttttgaacaccctatataatactcactctcttattggtttaaatcattgtggg-ctacattttaaaaattgaacacatacaaagtagtga 32212975  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgtt 287  Q
     |||||||||||||||||||| |||||||  ||||| |||||||||||||| || |||||||||    
T  32212976 gacatacattgatttcatccaataaaagatagagtgctagagagagtgttaaaaagtgagtgtt 32213039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 127 - 288
Target Start/End: Complemental strand, 32205249 - 32205088
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    ||||||| ||||||||||| ||||||||||||||||| |||| ||  |||||||||||||||  ||| |   | ||||||||||| ||||||| |||| |    
T  32205249 caacactttcttttgaacatcctctctaatactcactctcttattagtttaaatcattgtagacctatactttaaaaattgaacccacacaaaatggtag 32205150  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
     |||||||||||||||||||| ||||||||||||   |||||||||||||  || ||||||||||    
T  32205149 gacatacattgatttcatccaataaaagagtgag---tagagagagtgttcaaaagtgagtgttg 32205088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 127 - 288
Target Start/End: Complemental strand, 33008274 - 33008113
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    |||||||||||||||||||| ||   |||||||| || | || ||| ||||||||||||| ||||||||   || |||| ||||| ||||||||||||||    
T  33008274 caacactctcttttgaacactct---taatactctctcttttattggtttaaatcattgtgggtctacacattggaaatagaacccacacaaagtggtgg 33008178  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
     ||||||| |||||||||||| |||||||||||||| |||||| ||||||  || ||||||||||    
T  33008177 gacatacaatgatttcatccaataaaagagtgagtgctagagatagtgttcaaaagtgagtgttg 33008113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 127 - 273
Target Start/End: Complemental strand, 7775172 - 7775024
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    ||||| |||||||||||||| |||||||||| |||||  ||| ||  ||||||||||| | |||| |||   ||||||||||||  ||||||||||||||    
T  7775172 caacattctcttttgaacactctctctaatattcactcacttatttgtttaaatcattct-ggtccacactttgaaaattgaactcacacaaagtggtgg 7775074  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
     |||||||||||||||||||| |||||||||||||| || ||||||||||    
T  7775073 gacatacattgatttcatccaataaaagagtgagtgctatagagagtgtt 7775024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 127 - 273
Target Start/End: Complemental strand, 39254256 - 39254107
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctacatg---aaaattgaaccaacacaaagtggtgg 223  Q
    ||||| |||||||||||||| |||| ||| ||||||| |||| ||||||||||| ||||| |||||||||    |||||||||||||||||||||||||     
T  39254256 caacattctcttttgaacactctctttaacactcactctcttattgatttaaattattgtgggtctacattttaaaaattgaaccaacacaaagtggtga 39254157  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
     ||||||||| |||| || || |||||||||||||| || ||||| ||||    
T  39254156 aacatacattaattttattcaataaaagagtgagtgctatagagaatgtt 39254107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 127 - 273
Target Start/End: Original strand, 44350809 - 44350958
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    ||||||||||||||||||||| ||||||||||||||| | |||||| |||||||||||||  |||||||   ||||||||||||| | ||||||||  |     
T  44350809 caacactctcttttgaacaccatctctaatactcactcttttgttggtttaaatcattgtgagtctacactttgaaaattgaacctaaacaaagtgacga 44350908  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
     |||||||||||||| ||||| ||||| ||||  ||||||||| ||||||    
T  44350909 gacatacattgatttgatccaataaaaaagtggatgttagagaaagtgtt 44350958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 127 - 288
Target Start/End: Complemental strand, 46517464 - 46517302
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    ||||||||||||||||||| ||||||||||||||| | |||| ||| |||||||||||||  |||||||   |||||||||||||  |||| | ||||||    
T  46517464 caacactctcttttgaacagcctctctaatactcattctcttattggtttaaatcattgtgagtctacactttgaaaattgaacccccacagaatggtgg 46517365  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
     | |||||||||||| ||||| |||| ||||||||| |  ||||||||||| || ||||||||||    
T  46517364 gatatacattgattttatccaataaatgagtgagtgct--agagagtgttaaaaagtgagtgttg 46517302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 142 - 273
Target Start/End: Original strand, 12263458 - 12263592
Alignment:
Q  142 aacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatacattgattt 238  Q
    ||||| |||||||||||||||| |||| ||| ||||||||||||| ||||||||   |||||||||| || |||||||||| ||| |||||||||||||     
T  12263458 aacactctctctaatactcactatcttattggtttaaatcattgtgggtctacactttgaaaattgatcctacacaaagtgatgggacatacattgattc 12263557  T
Q  239 catccagtaaaagagtgagtgttagagagagtgtt 273  Q
    |||||  ||||||||||  || |||||||||||||    
T  12263558 catccgataaaagagtggatgatagagagagtgtt 12263592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 127 - 273
Target Start/End: Complemental strand, 6442338 - 6442189
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    ||||||| ||||||||||||  ||| ||||||||||| | || ||| ||||||||||||| ||||||||   ||||||||||| |  |||||| ||||||    
T  6442338 caacactttcttttgaacactatctttaatactcactcttttattggtttaaatcattgtgggtctacactttgaaaattgaatccccacaaaatggtgg 6442239  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
     ||||||||||||||||| || |||| || |||||| |||||||||||||    
T  6442238 aacatacattgatttcatacaataaatgactgagtgatagagagagtgtt 6442189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 134 - 288
Target Start/End: Complemental strand, 14795297 - 14795140
Alignment:
Q  134 ctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatac 230  Q
    ||||||||||||| |||||| ||||||||| |||| ||  ||||||||||| | | | ||||   | ||||||||||||||| ||| |||||| ||||||    
T  14795297 ctcttttgaacactctctcttatactcactctcttattagtttaaatcattatggatatacactttaaaaattgaaccaacaaaaattggtgggacatac 14795198  T
Q  231 attgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
    |||||||||||||| ||||| ||||| || |||||||||||||  || ||||||||||    
T  14795197 attgatttcatccaataaaaaagtgactgatagagagagtgttgaaaagtgagtgttg 14795140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 134 - 288
Target Start/End: Complemental strand, 15242289 - 15242132
Alignment:
Q  134 ctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatac 230  Q
    ||||||||||||| |||||| ||||||||| |||| ||  ||||||||||| | | | ||||   | ||||||||||||||| ||| |||||| ||||||    
T  15242289 ctcttttgaacactctctcttatactcactctcttattagtttaaatcattatggatatacactttaaaaattgaaccaacaaaaattggtgggacatac 15242190  T
Q  231 attgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
    |||||||||||||| ||||| ||||| || |||||||||||||  || ||||||||||    
T  15242189 attgatttcatccaataaaaaagtgactgatagagagagtgttgaaaagtgagtgttg 15242132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 160 - 288
Target Start/End: Original strand, 31502504 - 31502635
Alignment:
Q  160 cactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtga 256  Q
    |||| |||| ||| |||||||||||||  |||||||   ||||||||||||  ||||||| |||||| |||||| ||||||||||||| |||||||||||    
T  31502504 cactctcttattggtttaaatcattgtgagtctacactttgaaaattgaacgcacacaaaatggtgggacataccttgatttcatccaataaaagagtga 31502603  T
Q  257 gtgttagagagagtgttagaaggtgagtgttg 288  Q
    |||||||||||| ||||  || ||||||||||    
T  31502604 gtgttagagagactgttgaaaagtgagtgttg 31502635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 127 - 235
Target Start/End: Original strand, 6580009 - 6580120
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    |||||||||||||||||||| |||||||||||||||| |||| ||| ||||||| ||||| |||| | |   ||||||||||||| ||||||||| |||     
T  6580009 caacactctcttttgaacactctctctaatactcactctcttattggtttaaattattgtgggtccatattttgaaaattgaacctacacaaagtagtga 6580108  T
Q  224 cacatacattga 235  Q
     |||||||||||    
T  6580109 gacatacattga 6580120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 17354609 - 17354681
Alignment:
Q  199 aaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtg 271  Q
    |||| ||||| ||| |||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||    
T  17354609 aaatagaacccacataaagtggtgggacatacattgatttcatccaataaaagaatgagtgttagagagagtg 17354681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 127 - 242
Target Start/End: Original strand, 25686842 - 25686960
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    |||||||||||||||||||  || ||||||||||| | |||| ||| ||||||||||||| ||||||||   ||||||||||||| | | ||||||||      
T  25686842 caacactctcttttgaacattctttctaatactcattatcttattggtttaaatcattgtgggtctacactttgaaaattgaacccataaaaagtggtat 25686941  T
Q  224 cacatacattgatttcatc 242  Q
     ||||||||||||||||||    
T  25686942 gacatacattgatttcatc 25686960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 127 - 272
Target Start/End: Original strand, 24539129 - 24539278
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtc-tacat---gaaaattgaaccaacacaaagtggtg 222  Q
    ||||||||||||||| |||| |||||||| ||||||| |||  |||  |||||||| ||| |||| |||||   | |||| ||| | | | |||||||||    
T  24539129 caacactctcttttggacactctctctaacactcactctctcattgggttaaatcaatgtgggtcatacattttggaaatggaatccatataaagtggtg 24539228  T
Q  223 gcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgt 272  Q
    | ||||| |||||||| ||||| |||||||||||||||||||||||||||    
T  24539229 ggacatatattgattttatccaataaaagagtgagtgttagagagagtgt 24539278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 136 - 288
Target Start/End: Original strand, 19422850 - 19423005
Alignment:
Q  136 cttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctacat---gaaaattgaaccaacacaaagtggtggcacatacat 232  Q
    |||||||||||  ||||| ||||||||| | || ||| ||||||||||||| | ||||||    |||||| |   ||| |||| | ||||| ||||||||    
T  19422850 cttttgaacactatctctgatactcactcttttattggtttaaatcattgtggatctacacttcgaaaatagtgacaatacaatggggtgggacatacat 19422949  T
Q  233 tgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
    |||||||||||| | |||||||||||| |||||||||||||  || ||||||||||    
T  19422950 tgatttcatccaatgaaagagtgagtgatagagagagtgttgaaaagtgagtgttg 19423005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 127 - 196
Target Start/End: Original strand, 30742547 - 30742616
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctacat 196  Q
    ||||||||| |||||||||| | |||||||| ||| |||||| |||||||||||||||||||||||||||    
T  30742547 caacactctattttgaacactcactctaatattcattttcttattgatttaaatcattgtaggtctacat 30742616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 127 - 267
Target Start/End: Original strand, 48374446 - 48374589
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    |||||||||||||||||||| |||||||||||||||| |||||||| ||||||| |||||  || ||||   || |||| ||||| | | ||||||||||    
T  48374446 caacactctcttttgaacactctctctaatactcactctcttgttggtttaaattattgtgagtatacactttggaaatagaacccatagaaagtggtgg 48374545  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagag 267  Q
     |||| |||  ||| ||| || |||||||||||||  |||||||    
T  48374546 gacatgcatgaattccattcaataaaagagtgagtactagagag 48374589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 8073366 - 8073430
Alignment:
Q  195 atgaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtg 259  Q
    |||||||||||||  |||||||||||||| |||||||||||||||||||  ||||||||||||||    
T  8073366 atgaaaattgaacttacacaaagtggtgggacatacattgatttcatccgataaaagagtgagtg 8073430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 272
Target Start/End: Complemental strand, 17749868 - 17749719
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtc-tacat---gaaaattgaaccaacacaaagtggtg 222  Q
    ||||||||||||||| |||| |||||||| ||||||| |||  |||  |||||||| ||| |||| |||||   | ||||  || | | | |||||||||    
T  17749868 caacactctcttttggacactctctctaacactcactctctcattgggttaaatcaatgtgggtcatacattttggaaatgaaatccatataaagtggtg 17749769  T
Q  223 gcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgt 272  Q
    | ||||| |||||||| ||||| |||||||||||||||||||||||||||    
T  17749768 ggacatatattgattttatccaataaaagagtgagtgttagagagagtgt 17749719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 223
Target Start/End: Complemental strand, 27320547 - 27320448
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    ||||| ||||||||||| || ||||||| ||||||||||||| || |||||||| ||||| ||||||||   | ||||||||||| ||||||| ||||||    
T  27320547 caacattctcttttgaatactctctctactactcactttcttattcatttaaataattgtgggtctacactttaaaaattgaacctacacaaaatggtgg 27320448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 196 - 273
Target Start/End: Original strand, 44511015 - 44511092
Alignment:
Q  196 tgaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    ||||||||||||  | |||||||| ||  |||||||||||||||||||| ||||| |||||||| |||||||||||||    
T  44511015 tgaaaattgaacacagacaaagtgatgagacatacattgatttcatccaataaaaaagtgagtgctagagagagtgtt 44511092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 196 - 271
Target Start/End: Complemental strand, 13919881 - 13919806
Alignment:
Q  196 tgaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtg 271  Q
    ||||||| ||||| ||| |||||||||| |||||||||||||||| ||| |||| ||| ||||| |||||||||||    
T  13919881 tgaaaatggaacccacataaagtggtgggacatacattgatttcacccaataaatgagcgagtgctagagagagtg 13919806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 196 - 258
Target Start/End: Original strand, 19494418 - 19494480
Alignment:
Q  196 tgaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagt 258  Q
    ||||||| ||||| ||| |||||||||| |||||||||||||||| ||| |||||||||||||    
T  19494418 tgaaaatggaacccacataaagtggtgggacatacattgatttcacccaataaaagagtgagt 19494480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 199 - 268
Target Start/End: Original strand, 26703522 - 26703591
Alignment:
Q  199 aaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagaga 268  Q
    |||| ||||| ||| |||||||||  |||||||||||||||| ||| |||||||||||||| ||||||||    
T  26703522 aaatggaacccacataaagtggtgagacatacattgatttcacccaataaaagagtgagtgctagagaga 26703591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 139 - 267
Target Start/End: Original strand, 32178823 - 32178953
Alignment:
Q  139 ttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatacattga 235  Q
    |||||||  |||||| ||| ||||| |||| |||||||||||||||||  || ||||   |||||||||||  || ||| |||||||| ||||||||| |    
T  32178823 ttgaacaatctctctgataatcactctcttattgatttaaatcattgtgtgtatacactttgaaaattgaa-taaaacagagtggtggaacatacattaa 32178921  T
Q  236 tttcatccagtaaaagagtgagtgttagagag 267  Q
    ||||||||| ||||| ||| |||| |||||||    
T  32178922 tttcatccaataaaatagtaagtgctagagag 32178953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 235 - 286
Target Start/End: Original strand, 43930078 - 43930129
Alignment:
Q  235 atttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgt 286  Q
    |||||| ||| |||||||||||||||||||||||||||||||| | ||||||    
T  43930078 atttcacccaataaaagagtgagtgttagagagagtgttagaaagagagtgt 43930129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 127 - 271
Target Start/End: Complemental strand, 45909630 - 45909481
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtc-taca---tgaaaattgaaccaacacaaagtggtg 222  Q
    ||||||||||||||||| || |||||||| ||||||| | || |||  | |||||| |||||| | ||||   || |||| ||||| ||| |||||||||    
T  45909630 caacactctcttttgaatactctctctaacactcactcttttattgggtaaaatcaatgtaggacctacaatttggaaatggaacccacataaagtggtg 45909531  T
Q  223 gcacatacattgatttcatccagt-aaaagagtgagtgttagagagagtg 271  Q
    | |||||||||||||||| ||| | |||||||||| || ||| |||||||    
T  45909530 ggacatacattgatttcacccaataaaaagagtgaatgctagggagagtg 45909481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 287
Target Start/End: Complemental strand, 7459505 - 7459353
Alignment:
Q  138 tttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctacat---gaaaattgaaccaacacaaagtggtggcacatacattg 234  Q
    |||||| || |||| ||||||||||| | || ||| ||||||| ||||| | |||| ||   ||||||||| |  ||| |||||||||| | ||||||||    
T  7459505 tttgaatactctctttaatactcactcttttattggtttaaattattgtggatctatattttgaaaattgagctcacataaagtggtggaatatacattg 7459406  T
Q  235 atttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgtt 287  Q
    |||| ||| | ||||||| ||||| ||| ||||| ||||| || |||||||||    
T  7459405 attttatcgaataaaagaatgagtattatagagaatgttaaaaagtgagtgtt 7459353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 273
Target Start/End: Complemental strand, 12271086 - 12271010
Alignment:
Q  196 tgaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    ||||||| |||||| ||||||||||||| ||||||||||||||||||   ||||||||||  || || ||||||||||    
T  12271086 tgaaaatagaacca-cacaaagtggtgggacatacattgatttcatctgataaaagagtggatgctatagagagtgtt 12271010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 196 - 256
Target Start/End: Complemental strand, 10477338 - 10477278
Alignment:
Q  196 tgaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtga 256  Q
    ||||||||||||| ||||||| |||||  ||||||| |||||||||||| ||||| |||||    
T  10477338 tgaaaattgaacctacacaaaatggtgaaacatacactgatttcatccaataaaatagtga 10477278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 22786249 - 22786177
Alignment:
Q  199 aaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtg 271  Q
    |||| ||||| ||| |||||||||  |||||||||||||||| | | ||||| |||||||| |||||||||||    
T  22786249 aaatggaacccacataaagtggtgagacatacattgatttcacctaataaaaaagtgagtgctagagagagtg 22786177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 246 - 277
Target Start/End: Original strand, 22155939 - 22155970
Alignment:
Q  246 taaaagagtgagtgttagagagagtgttagaa 277  Q
    ||||||||||||||||||||||||||||||||    
T  22155939 taaaagagtgagtgttagagagagtgttagaa 22155970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 246 - 277
Target Start/End: Original strand, 22211854 - 22211885
Alignment:
Q  246 taaaagagtgagtgttagagagagtgttagaa 277  Q
    ||||||||||||||||||||||||||||||||    
T  22211854 taaaagagtgagtgttagagagagtgttagaa 22211885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 273
Target Start/End: Complemental strand, 32055659 - 32055600
Alignment:
Q  214 aaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    |||||||||| ||||| | |||||||||||| |||| |||| ||||||||||| ||||||    
T  32055659 aaagtggtgggacataaaatgatttcatccaataaatgagttagtgttagagatagtgtt 32055600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 38065333 - 38065388
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatca 182  Q
    ||||||||||| || ||||| ||||| ||||||||||||||| ||| |||||||||    
T  38065333 caacactctctcttcaacactctctcaaatactcactttcttattggtttaaatca 38065388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 262
Target Start/End: Complemental strand, 46068036 - 46067973
Alignment:
Q  199 aaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgtta 262  Q
    |||| ||||| ||| |||||||||| |||||||||||||||| ||| |||  ||||||||||||    
T  46068036 aaatggaacccacataaagtggtggaacatacattgatttcaaccaataagggagtgagtgtta 46067973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 142 - 192
Target Start/End: Complemental strand, 12167365 - 12167315
Alignment:
Q  142 aacaccctctctaatactcactttcttgttgatttaaatcattgtaggtct 192  Q
    ||||| |||| |||||||||||||||| ||| ||||||||||||| |||||    
T  12167365 aacactctctttaatactcactttcttattggtttaaatcattgtgggtct 12167315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 235 - 277
Target Start/End: Complemental strand, 25980811 - 25980769
Alignment:
Q  235 atttcatccagtaaaagagtgagtgttagagagagtgttagaa 277  Q
    |||||||||| || |||||||||| ||||||||||||||||||    
T  25980811 atttcatccaatagaagagtgagttttagagagagtgttagaa 25980769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 225 - 267
Target Start/End: Complemental strand, 31874103 - 31874061
Alignment:
Q  225 acatacattgatttcatccagtaaaagagtgagtgttagagag 267  Q
    |||||||||||||||||||| ||||| |||||||| |||||||    
T  31874103 acatacattgatttcatccaataaaaaagtgagtgctagagag 31874061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 228 - 270
Target Start/End: Original strand, 45909570 - 45909612
Alignment:
Q  228 tacattgatttcatccagtaaaagagtgagtgttagagagagt 270  Q
    ||||||||||| | ||| |||||||||||||||||||||||||    
T  45909570 tacattgattttacccaataaaagagtgagtgttagagagagt 45909612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 273
Target Start/End: Complemental strand, 2520698 - 2520657
Alignment:
Q  232 ttgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    ||||||||| ||| |||||||||||||||| |||||||||||    
T  2520698 ttgatttcacccaataaaagagtgagtgttggagagagtgtt 2520657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 258
Target Start/End: Original strand, 25428567 - 25428620
Alignment:
Q  205 aaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagt 258  Q
    |||| ||| |||||||||| ||||||||||||||||  || |||||||||||||    
T  25428567 aacccacataaagtggtgggacatacattgatttcacacaataaaagagtgagt 25428620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 27320294 - 27320249
Alignment:
Q  228 tacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    ||||||||||| || || |||||||||||||||| |||||||||||    
T  27320294 tacattgattttattcaataaaagagtgagtgttggagagagtgtt 27320249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 196
Target Start/End: Original strand, 36845498 - 36845567
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctacat 196  Q
    ||||||||| ||||||| || ||||  |||| ||||| |||| ||| ||||||||||||| |||||||||    
T  36845498 caacactctattttgaatactctctagaatattcactctcttattggtttaaatcattgtgggtctacat 36845567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 257
Target Start/End: Original strand, 36845567 - 36845661
Alignment:
Q  165 tcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgag 257  Q
    |||| ||| ||||||||||||| |||||| |   ||||||||||||| ||||||| |||||  | ||| ||||||||||| || ||||||||||||    
T  36845567 tcttattggtttaaatcattgtgggtctatactttgaaaattgaacccacacaaattggtgaga-atatattgatttcattcaataaaagagtgag 36845661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 47822047 - 47821990
Alignment:
Q  229 acattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgt 286  Q
    |||| ||||||| ||| || ||||||||||||||||||||||| ||||| | ||||||    
T  47822047 acatggatttcacccaatataagagtgagtgttagagagagtgctagaaagagagtgt 47821990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 214 - 270
Target Start/End: Complemental strand, 14759726 - 14759670
Alignment:
Q  214 aaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagt 270  Q
    |||||||||| ||||| ||||||||||  || |||||||||||||| ||| ||||||    
T  14759726 aaagtggtgggacataaattgatttcactcaataaaagagtgagtgctagggagagt 14759670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 19840948 - 19840908
Alignment:
Q  231 attgatttcatccagtaaaagagtgagtgttagagagagtg 271  Q
    |||||||||| ||| |||||||||||||| |||||||||||    
T  19840948 attgatttcacccaataaaagagtgagtgctagagagagtg 19840908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 234 - 278
Target Start/End: Original strand, 49160366 - 49160410
Alignment:
Q  234 gatttcatccagtaaaagagtgagtgttagagagagtgttagaag 278  Q
    ||||||||||| ||| | ||| |||||||||||||||||||||||    
T  49160366 gatttcatccaataataaagtaagtgttagagagagtgttagaag 49160410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 1e-39; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 127 - 269
Target Start/End: Complemental strand, 9470253 - 9470109
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    |||||||||||| |||| ||||||||||||| ||||| |||| ||| ||||||||||||| ||||||||   ||||||||||||| | ||||||||||||    
T  9470253 caacactctcttctgaa-accctctctaatattcactctcttattggtttaaatcattgtgggtctacactttgaaaattgaacccaaacaaagtggtgg 9470155  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagag 269  Q
     |||||||||||||||||||| ||||||||||||||||||||||||    
T  9470154 gacatacattgatttcatccaataaaagagtgagtgttagagagag 9470109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 127 - 288
Target Start/End: Original strand, 26767768 - 26767932
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    ||||||| |||||||||||| || ||||||||||||| | || ||| |||||||||||||  |||||||   |||||||||||||  |||||||||||||    
T  26767768 caacactttcttttgaacactctatctaatactcactcttttattggtttaaatcattgtgagtctacaatttgaaaattgaaccctcacaaagtggtgg 26767867  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
     |||||||||||||||||||||||||||||| |||| |||||||| ||||  || ||||||||||    
T  26767868 gacatacattgatttcatccagtaaaagagtaagtgctagagagaatgttgaaaagtgagtgttg 26767932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 127 - 288
Target Start/End: Complemental strand, 45554732 - 45554576
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctacat---gaaaattgaaccaacacaaagtggtgg 223  Q
    |||||||||||||||||||  ||||||||||||||||||||| ||| ||||||||||||| ||||||||    ||||||||        |||||||||||    
T  45554732 caacactctcttttgaacattctctctaatactcactttcttattggtttaaatcattgtgggtctacacttggaaaattg--------caaagtggtgg 45554641  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
     |||||||||||||||||||| |||||||||||||| |||||||||||||  || ||||||||||    
T  45554640 gacatacattgatttcatccaataaaagagtgagtgctagagagagtgttgaaaagtgagtgttg 45554576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 127 - 273
Target Start/End: Original strand, 6980127 - 6980276
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    ||||||||||||||||||||  ||||||||||||||| |||| ||  || |||||||||| |||||| |   ||||||||||||  |||||||||||| |    
T  6980127 caacactctcttttgaacactttctctaatactcactctcttattagttgaaatcattgtgggtctatactttgaaaattgaactcacacaaagtggtag 6980226  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
     |||||| ||||||||||||| |||||||||||||| |||||||||||||    
T  6980227 aacataccttgatttcatccaataaaagagtgagtgctagagagagtgtt 6980276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 127 - 288
Target Start/End: Complemental strand, 12989364 - 12989200
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    |||||||||||||||||||| |||||||||||||||| |||| ||| ||||||||||||| ||||||||    | |||| ||| | | ||||||||||||    
T  12989364 caacactctcttttgaacactctctctaatactcactctcttattggtttaaatcattgtgggtctacacttcggaaatagaatccatacaaagtggtgg 12989265  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
     |||||||||||||||||||| | ||||||||||||  | ||||||||||  || ||||||||||    
T  12989264 gacatacattgatttcatccaatgaaagagtgagtgagaaagagagtgttgaaaagtgagtgttg 12989200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 131 - 273
Target Start/End: Complemental strand, 38464332 - 38464187
Alignment:
Q  131 actctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcaca 227  Q
    |||||||||||||||| |||||||||||| ||| |||| ||| ||||||||||||| ||||||||   ||||||||||||| || ||||||| ||  |||    
T  38464332 actctcttttgaacactctctctaatacttactctcttattggtttaaatcattgtgggtctacactttgaaaattgaacccacgcaaagtgatgagaca 38464233  T
Q  228 tacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    |||||||||||||| || ||||| ||| | ||| ||||||||||||    
T  38464232 tacattgatttcatacaataaaaaagtaattgtcagagagagtgtt 38464187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 127 - 271
Target Start/End: Complemental strand, 44274407 - 44274260
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    |||||||||||||| || |  |||||||| ||||||| | || ||| ||||||||||||| | ||||||   ||||| ||||||| ||||||||||||||    
T  44274407 caacactctcttttaaatattctctctaacactcactctgttattggtttaaatcattgtggatctacactttgaaagttgaacccacacaaagtggtgg 44274308  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtg 271  Q
     |||||||||||||| ||||| | ||||||||| ||||||||||||||    
T  44274307 gacatacattgattttatccaatgaaagagtgaatgttagagagagtg 44274260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 141 - 273
Target Start/End: Complemental strand, 10981677 - 10981542
Alignment:
Q  141 gaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatacattgatt 237  Q
    |||||| | |||||||||||||| |||| ||| ||||||||||||| ||||||||   || |||| ||||| |||||||||||||| |||||||||  ||    
T  10981677 gaacactccctctaatactcactctcttattggtttaaatcattgtgggtctacacattggaaatagaacccacacaaagtggtgggacatacatttttt 10981578  T
Q  238 tcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    |||| || || || ||||||||||||||||||||||    
T  10981577 tcattcaatagaaaagtgagtgttagagagagtgtt 10981542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 174 - 288
Target Start/End: Original strand, 18511263 - 18511380
Alignment:
Q  174 tttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagt 270  Q
    |||||| |||||||||||| ||   ||||||||||||| ||| ||| | |||| |||||||||||||| ||||| |||||||||||||| ||| ||||||    
T  18511263 tttaaaacattgtaggtcttcactttgaaaattgaacccacataaaatagtgggacatacattgattttatccaataaaagagtgagtgatagtgagagt 18511362  T
Q  271 gttagaaggtgagtgttg 288  Q
    |||| || ||||||||||    
T  18511363 gttaaaaagtgagtgttg 18511380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 128 - 258
Target Start/End: Original strand, 35316409 - 35316542
Alignment:
Q  128 aacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggc 224  Q
    ||||||||||||||| ||| || | | ||||||||| |||| ||||||||||||||||| ||||||||   | ||||||||| ||||| ||| ||||||     
T  35316409 aacactctcttttgagcactctttatgatactcactctcttattgatttaaatcattgtgggtctacaatttaaaaattgaatcaacataaaatggtggg 35316508  T
Q  225 acatacattgatttcatccagtaaaagagtgagt 258  Q
    ||||||||| |||| ||| | |||||||||||||    
T  35316509 acatacattaattttatctaataaaagagtgagt 35316542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 132 - 272
Target Start/End: Complemental strand, 15884597 - 15884458
Alignment:
Q  132 ctctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacat 228  Q
    ||||||||||| |||  ||||||||||||| | |||| ||| ||||||| ||||| ||||||||   ||||||||||||| ||||||||||||||         
T  15884597 ctctcttttgaccacaatctctaatactcattatcttattggtttaaataattgtgggtctacattttgaaaattgaacccacacaaagtggtgg----g 15884502  T
Q  229 acattgatttcatccagtaaaagagtgagtgttagagagagtgt 272  Q
    ||||||||||| |||| ||||||||| ||||||  |||||||||    
T  15884501 acattgatttcgtccaataaaagagtaagtgttgaagagagtgt 15884458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 128 - 273
Target Start/End: Complemental strand, 11539598 - 11539447
Alignment:
Q  128 aacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatca-ttgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    |||| ||||||||  |||| |||||||||||||||| |||| ||| ||||||||| || | | ||||||   ||||||| ||||  |||||||||| |||    
T  11539598 aacattctcttttacacactctctctaatactcactctcttattggtttaaatcaattctggatctacactttgaaaatagaactcacacaaagtgatgg 11539499  T
Q  224 cacatacat--tgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
     ||||||||  |||||||||||| |||||||||||||| |||| ||||||||    
T  11539498 aacatacatattgatttcatccaataaaagagtgagtgctagaaagagtgtt 11539447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 135 - 283
Target Start/End: Complemental strand, 19639258 - 19639107
Alignment:
Q  135 tcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacataca 231  Q
    ||||||||| | ||||| ||||| ||||| |||| ||| ||||||||||||||||||| ||   ||||||||||||  |||| | ||| ||  |||||||    
T  19639258 tcttttgaatagcctctataatattcactctcttattggtttaaatcattgtaggtctgcactttgaaaattgaactcacactatgtgatgagacataca 19639159  T
Q  232 ttgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgag 283  Q
    ||||||||||| | ||||| ||||| || | |||||||||||| || |||||    
T  19639158 ttgatttcatctaataaaatagtgaatgctggagagagtgttaaaaagtgag 19639107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 135 - 283
Target Start/End: Complemental strand, 19837851 - 19837700
Alignment:
Q  135 tcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacataca 231  Q
    ||||||||| | ||||| ||||| ||||| |||| ||| ||||||||||||||||||| ||   ||||||||||||  |||| | ||| ||  |||||||    
T  19837851 tcttttgaatagcctctataatattcactctcttattggtttaaatcattgtaggtctgcactttgaaaattgaactcacactatgtgatgagacataca 19837752  T
Q  232 ttgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgag 283  Q
    ||||||||||| | ||||| ||||| || | |||||||||||| || |||||    
T  19837751 ttgatttcatctaataaaatagtgaatgctggagagagtgttaaaaagtgag 19837700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 127 - 259
Target Start/End: Original strand, 32856142 - 32856277
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    ||||||||| ||||||||||||| ||||||||||| | |||| ||| ||||||||| | | | ||||||   |||||||| |||| |||||||||||||     
T  32856142 caacactctattttgaacaccctttctaatactcaatctcttattggtttaaatcactatggatctacactttgaaaattcaacccacacaaagtggtga 32856241  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtg 259  Q
     ||||| ||| |||||||||  ||||||||| ||||    
T  32856242 aacatatattaatttcatccgataaaagagtcagtg 32856277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 148 - 287
Target Start/End: Original strand, 36471866 - 36472008
Alignment:
Q  148 ctctctaatactcactttcttgttgatttaaatcattgtaggtctacat---gaaaattgaaccaacacaaagtggtggcacatacattgatttcatcca 244  Q
    |||||||||||||||| | || ||| |||||||||||||  || |||||   |||||||||| | | | |||||||||  |||||| |||||||||||||    
T  36471866 ctctctaatactcactcttttattggtttaaatcattgtgagtttacattttgaaaattgaatccataaaaagtggtgagacatactttgatttcatcca 36471965  T
Q  245 gtaaaagagtgagtgttagagagagtgttagaaggtgagtgtt 287  Q
     ||| ||| ||||||| ||||||||||||  || |||||||||    
T  36471966 ataagagattgagtgtcagagagagtgttgaaaagtgagtgtt 36472008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 42182987 - 42182915
Alignment:
Q  199 aaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtg 271  Q
    |||| ||||| ||| |||||||||| |||||||||||||||| ||| |||||||||||||| |||||||||||    
T  42182987 aaatggaacccacataaagtggtgggacatacattgatttcacccaataaaagagtgagtgctagagagagtg 42182915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 205 - 271
Target Start/End: Original strand, 28898125 - 28898191
Alignment:
Q  205 aaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtg 271  Q
    |||| ||| |||||||||| |||||||||||||||| ||| |||||||||||||| |||||||||||    
T  28898125 aacccacataaagtggtgggacatacattgatttcacccaataaaagagtgagtgctagagagagtg 28898191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 199 - 268
Target Start/End: Complemental strand, 1110296 - 1110227
Alignment:
Q  199 aaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagaga 268  Q
    |||| ||||| ||| |||||||||| ||||||||||||||||  || |||||||||||||||||||||||    
T  1110296 aaatggaacccacataaagtggtgggacatacattgatttcactcaataaaagagtgagtgttagagaga 1110227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 196 - 286
Target Start/End: Complemental strand, 3804686 - 3804595
Alignment:
Q  196 tgaaaattgaaccaacacaaagtggtggc-acatacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgt 286  Q
    |||||||| |||| ||| |||||| |||  |||||||||||||||||||| ||||||||||| ||||| ||||||||||  || ||||||||    
T  3804686 tgaaaattaaacctacataaagtgatggggacatacattgatttcatccaataaaagagtgaatgttaaagagagtgttgaaaagtgagtgt 3804595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 199 - 273
Target Start/End: Complemental strand, 15509012 - 15508938
Alignment:
Q  199 aaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    |||| ||||| ||| ||| |||||| ||||||||||||||||  || ||||||||||||||||||| ||||||||    
T  15509012 aaatggaacccacaaaaaatggtgggacatacattgatttcactcaataaaagagtgagtgttagaaagagtgtt 15508938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 290
Target Start/End: Original strand, 30718340 - 30718499
Alignment:
Q  133 tctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacata 229  Q
    ||||||||  |||| |||||||||| ||||||| || ||| |||||||||||||  |||||||   |||||||  || | ||||||| || ||| |||||    
T  30718340 tctcttttagacactctctctaatattcacttttttattggtttaaatcattgtgagtctacactttgaaaatacaatccacacaaaatgatgg-acata 30718438  T
Q  230 cattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttgat 290  Q
     || ||||||||||| |||||||||||||  |||||||| ||||  ||  |||||||||||    
T  30718439 tatcgatttcatccaataaaagagtgagtactagagagaatgtttaaaattgagtgttgat 30718499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 41805873 - 41805931
Alignment:
Q  214 aaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgt 272  Q
    |||||||||| |||||||||||||| ||||| ||||||||||||||||| ||| |||||    
T  41805873 aaagtggtgggacatacattgattttatccaataaaagagtgagtgttaaagaaagtgt 41805931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 1107121 - 1107064
Alignment:
Q  214 aaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtg 271  Q
    |||||||||| |||||||||||||||| ||| |||||||||| ||| |||||||||||    
T  1107121 aaagtggtgggacatacattgatttcacccaataaaagagtgggtgctagagagagtg 1107064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 214 - 270
Target Start/End: Original strand, 4964770 - 4964826
Alignment:
Q  214 aaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagt 270  Q
    |||||||||| |||||||||||||||| ||| ||||| |||||||| ||||||||||    
T  4964770 aaagtggtgggacatacattgatttcacccaataaaaaagtgagtgctagagagagt 4964826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 214 - 258
Target Start/End: Complemental strand, 6315741 - 6315697
Alignment:
Q  214 aaagtggtggcacatacattgatttcatccagtaaaagagtgagt 258  Q
    |||||||||| |||||||||||||||||||||||||| |||||||    
T  6315741 aaagtggtggaacatacattgatttcatccagtaaaaaagtgagt 6315697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 288
Target Start/End: Original strand, 37652258 - 37652416
Alignment:
Q  133 tctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacata 229  Q
    |||| ||||||||  |||||| ||| ||||||| || ||| |||||||||||||   ||||||   || |||||||||  |||||||| ||||| |||||    
T  37652258 tctcatttgaacattctctcttatattcacttttttattggtttaaatcattgtgaatctacacgttggaaattgaacatacacaaaggggtggaacata 37652357  T
Q  230 cattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
    ||||||||||||| | ||||| ||| |||| || | | ||||||  || ||||||||||    
T  37652358 cattgatttcatctaataaaaaagtaagtgctaaaaaaagtgttgaaatgtgagtgttg 37652416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 127 - 273
Target Start/End: Original strand, 34142146 - 34142295
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    ||||||||||||| ||| |   ||| ||||| ||||| |||| ||| |||||| ||||||   ||||||   ||||||||||||| ||||||||| |||     
T  34142146 caacactctctttagaatattttctttaatattcactctcttattggtttaaaccattgtgactctacactttgaaaattgaacccacacaaagtagtga 34142245  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
     ||||||||  |||||||||| ||||| ||||| |||| |||||| ||||    
T  34142246 gacatacatgaatttcatccaataaaaaagtgaatgtttgagagattgtt 34142295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 231 - 273
Target Start/End: Original strand, 42579771 - 42579813
Alignment:
Q  231 attgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    |||||||||||||| |||||||||||||||| |||||||||||    
T  42579771 attgatttcatccaataaaagagtgagtgtttgagagagtgtt 42579813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 175 - 266
Target Start/End: Complemental strand, 2476659 - 2476565
Alignment:
Q  175 ttaaatcattgtaggtctacat---gaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagaga 266  Q
    |||||||||| || ||||||||   ||||||||||   ||||||||| |||| |||||||||||||| ||| | ||||||||| |||| ||||||    
T  2476659 ttaaatcattataagtctacattttgaaaattgaagttacacaaagtagtgggacatacattgattttatctaataaaagagtaagtgctagaga 2476565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 288
Target Start/End: Original strand, 16719463 - 16719601
Alignment:
Q  153 taatactcactttcttgttgatttaaatcattgtaggtctacat---gaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaa 249  Q
    ||||||||| |||  | ||| ||||||||||||  |||||||||   |||||||||||| |||  || |||||| | |||||||||||||||| | ||||    
T  16719463 taatactcatttttgtattggtttaaatcattgcgggtctacattttgaaaattgaacctacatgaaatggtgggatatacattgatttcatctaataaa 16719562  T
Q  250 agagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
    |||||  ||| || ||| ||||||  || ||||||||||    
T  16719563 agagtatgtgctaaagacagtgttgaaaagtgagtgttg 16719601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 210 - 270
Target Start/End: Complemental strand, 17188152 - 17188092
Alignment:
Q  210 acacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagt 270  Q
    |||||||||||||  | | |||||||||||||||| ||||| |||||||| ||||||||||    
T  17188152 acacaaagtggtgagatacacattgatttcatccaataaaatagtgagtgatagagagagt 17188092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 225 - 273
Target Start/End: Original strand, 25666701 - 25666749
Alignment:
Q  225 acatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    |||||||||||||||||||  ||||||||||| |||| |||||||||||    
T  25666701 acatacattgatttcatccgataaaagagtgaatgtttgagagagtgtt 25666749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 204 - 271
Target Start/End: Complemental strand, 37228592 - 37228524
Alignment:
Q  204 gaaccaacacaaagtggtggcacatacattgattt-catccagtaaaagagtgagtgttagagagagtg 271  Q
    ||||| ||| |||||||||| ||||||||| |||| || ||| |||||||||||||| |||||||||||    
T  37228592 gaacccacataaagtggtgggacatacattaattttcacccaataaaagagtgagtgctagagagagtg 37228524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 258
Target Start/End: Original strand, 4602890 - 4603008
Alignment:
Q  142 aacaccctctctaatactcactttctt-gttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatacattgatt 237  Q
    ||||| |||||||||| ||||| |||| |  | ||||||||||| ||||||| ||   | |||||||||| ||||  ||||| ||| ||||| |||||||    
T  4602890 aacactctctctaatagtcactctctttggcggtttaaatcattataggtctgcactttaaaaattgaacaaaca--aagtgatggaacatatattgatt 4602987  T
Q  238 tcatccagtaaaagagtgagt 258  Q
    ||||||| |||||||||||||    
T  4602988 tcatccaataaaagagtgagt 4603008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 37719903 - 37719860
Alignment:
Q  228 tacattgatttcatccagtaaaagagtgagtgttagagagagtg 271  Q
    ||||||||||||||||| |||||||||||||| |||| ||||||    
T  37719903 tacattgatttcatccaataaaagagtgagtgctagaaagagtg 37719860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 273
Target Start/End: Complemental strand, 43400216 - 43400157
Alignment:
Q  214 aaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    |||||||||| ||||||| |  ||||||||| ||| | ||||||||||||||||||||||    
T  43400216 aaagtggtgggacatacactagtttcatccaataagaaagtgagtgttagagagagtgtt 43400157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 11775859 - 11775913
Alignment:
Q  218 tggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgt 272  Q
    ||||||||||| ||||||||| ||||| ||||| | | |||||||||||||||||    
T  11775859 tggtggcacattcattgattttatccaataaaacaataagtgttagagagagtgt 11775913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 229 - 279
Target Start/End: Original strand, 23403802 - 23403852
Alignment:
Q  229 acattgatttcatccagtaaaagagtgagtgttagagagagtgttagaagg 279  Q
    |||| ||||||| ||||||| |||||||| |||||| ||||||||||||||    
T  23403802 acatggatttcacccagtaagagagtgagggttagaaagagtgttagaagg 23403852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 228 - 270
Target Start/End: Complemental strand, 28898103 - 28898061
Alignment:
Q  228 tacattgatttcatccagtaaaagagtgagtgttagagagagt 270  Q
    ||||||||||||||||| |||||||||||||| || |||||||    
T  28898103 tacattgatttcatccaataaaagagtgagtgctaaagagagt 28898061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 172
Target Start/End: Original strand, 8009522 - 8009567
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttg 172  Q
    |||||||||||||||||||| || ||||| ||||||||| ||||||    
T  8009522 caacactctcttttgaacactctttctaacactcacttttttgttg 8009567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 238
Target Start/End: Original strand, 25238284 - 25238399
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacaca-aagtggtg 222  Q
    |||||||||||||| |||||  ||||||  ||||||||| || ||| ||||||||||||| | ||||||   ||||||| ||||| ||| | ||||| ||    
T  25238284 caacactctcttttaaacactttctctagcactcacttttttattggtttaaatcattgtggatctacactttgaaaatagaacccacaaagaagtgatg 25238383  T
Q  223 gcacatacattgattt 238  Q
      ||||||||||||||    
T  25238384 agacatacattgattt 25238399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 30706443 - 30706390
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaat 180  Q
    |||||||||||||| ||||| ||||| || ||||||||| |||||| |||||||    
T  30706443 caacactctcttttcaacactctctcaaacactcactttattgttggtttaaat 30706390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 31395542 - 31395599
Alignment:
Q  214 aaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtg 271  Q
    ||||||| || |||||||||||||||| ||| |||| ||||||||| || ||||||||    
T  31395542 aaagtggagggacatacattgatttcacccaataaaggagtgagtgctaaagagagtg 31395599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 267
Target Start/End: Complemental strand, 31494289 - 31494236
Alignment:
Q  214 aaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagag 267  Q
    ||||| |||| |||||||||  ||||||||| ||| ||||||||||||||||||    
T  31494289 aaagtagtgggacatacattattttcatccaataagagagtgagtgttagagag 31494236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 212 - 288
Target Start/End: Complemental strand, 2122880 - 2122804
Alignment:
Q  212 acaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
    |||||||||||  |||||||||||||||||||  | ||||||||| || |||||| ||| ||  || ||||||||||    
T  2122880 acaaagtggtgatacatacattgatttcatcctatgaaagagtgattgatagagaaagtattgaaaagtgagtgttg 2122804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 127 - 195
Target Start/End: Original strand, 4552847 - 4552915
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca 195  Q
    |||||||| ||||||||||   | ||| ||||||||| |||| ||| ||||||||||||| ||||||||    
T  4552847 caacactcacttttgaacattttttctgatactcactctcttattggtttaaatcattgtgggtctaca 4552915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 218 - 266
Target Start/End: Original strand, 24895368 - 24895416
Alignment:
Q  218 tggtggcacatacattgatttcatccagtaaaagagtgagtgttagaga 266  Q
    |||||| | |||||||||||| ||||| ||||||||||||| |||||||    
T  24895368 tggtggaatatacattgattttatccattaaaagagtgagtattagaga 24895416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 198 - 254
Target Start/End: Complemental strand, 32701569 - 32701513
Alignment:
Q  198 aaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagt 254  Q
    ||||||||||  ||| |||||||||| | |||||||||||| ||||| |||||||||    
T  32701569 aaaattgaacatacataaagtggtgggatatacattgattttatccaataaaagagt 32701513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 2e-38; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 127 - 267
Target Start/End: Original strand, 34861199 - 34861337
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctacatgaaaattgaaccaacacaaagtggtggcac 226  Q
    |||||||||||||||||||||||| |||||||||||| |||| ||| ||||||| ||||| || ||   ||||||||||||| |||||||||||||| ||    
T  34861199 caacactctcttttgaacaccctccctaatactcactctcttattggtttaaattattgtgggactt--tgaaaattgaacctacacaaagtggtgggac 34861296  T
Q  227 atacattgatttcatccagtaaaagagtgagtgttagagag 267  Q
    |||||||||||||||||| |||||||||||||| |||||||    
T  34861297 atacattgatttcatccaataaaagagtgagtgctagagag 34861337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 128 - 284
Target Start/End: Original strand, 1977181 - 1977340
Alignment:
Q  128 aacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggc 224  Q
    ||||| ||||||||||||| |||||||||||||||| | || ||| ||||||||||||| | ||||||   ||||||||||||| |||||||||||| |     
T  1977181 aacacactcttttgaacacactctctaatactcactcttttattggtttaaatcattgtggatctacactttgaaaattgaacccacacaaagtggttgg 1977280  T
Q  225 acatacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagt 284  Q
    ||||||||||||||||||||  | ||||||||||| |||||||||||||| || ||||||    
T  1977281 acatacattgatttcatccaacagaagagtgagtgctagagagagtgttaaaaagtgagt 1977340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 134 - 273
Target Start/End: Original strand, 17499247 - 17499389
Alignment:
Q  134 ctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatac 230  Q
    |||||||||  || |||||||||||||||| |||| ||| ||||||||||||| | ||||||   ||||||||||||||||||||| |||||| |||||     
T  17499247 ctcttttgacaactctctctaatactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaaccaacacaaaatggtgggacatat 17499346  T
Q  231 attgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    |||||||||||||| |||||||  ||||| |||||||||||||    
T  17499347 attgatttcatccaataaaagatagagtgctagagagagtgtt 17499389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 127 - 273
Target Start/End: Complemental strand, 8904025 - 8903876
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    ||||||||||||||||||| | | |||| |||| ||| |||| ||| ||||||||||||| ||||||||   ||||||||||||| ||||||||||||||    
T  8904025 caacactctcttttgaacatcttttctattacttactctcttattggtttaaatcattgtgggtctacactttgaaaattgaaccgacacaaagtggtgg 8903926  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
     |||||||||||||||||| | ||||  |||||||  |||||||||||||    
T  8903925 gacatacattgatttcatcaaataaacaagtgagtactagagagagtgtt 8903876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 127 - 288
Target Start/End: Complemental strand, 16983567 - 16983403
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    |||||||||||||||||||| |||||||||||||||| |||| ||| |||||||||||||  |||||||   |||||||||||||  ||||||||| |||    
T  16983567 caacactctcttttgaacactctctctaatactcactctcttattggtttaaatcattgtgagtctacactttgaaaattgaacccccacaaagtgatgg 16983468  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
     ||||| | |||||| ||||| ||||  |||||||| |||| ||||||||  || ||||||||||    
T  16983467 gacataaaatgattttatccaataaatcagtgagtgctagatagagtgttgaaaagtgagtgttg 16983403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 142 - 273
Target Start/End: Complemental strand, 32072255 - 32072121
Alignment:
Q  142 aacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatacattgattt 238  Q
    ||||| ||||||||| | || | |||| ||||||||||| ||||| ||||||||   | ||||||||||| |||||||||||||| ||||||||| ||||    
T  32072255 aacactctctctaatgcccattctcttattgatttaaataattgtgggtctacactttaaaaattgaacccacacaaagtggtgggacatacattcattt 32072156  T
Q  239 catccagtaaaagagtgagtgttagagagagtgtt 273  Q
    |||||| |||||||||||||| |||||||||||||    
T  32072155 catccaataaaagagtgagtgctagagagagtgtt 32072121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 24055927 - 24056096
Alignment:
Q  122 catatcaacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagt 218  Q
    |||| ||||||||||||||||||||  ||||||| ||||||| |||| ||| ||||||| ||||| ||||||||   ||||||||||||  |||||||||    
T  24055927 cataacaacactctcttttgaacactttctctaacactcactctcttattggtttaaataattgtgggtctacactttgaaaattgaacttacacaaagt 24056026  T
Q  219 ggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
    ||||| ||||||||| ||||||||   |||||||| ||||| || |||||| |||  || ||||||||||    
T  24056027 ggtgggacatacattaatttcatctgataaaagagcgagtgctaaagagagcgttgaaaagtgagtgttg 24056096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 127 - 273
Target Start/End: Original strand, 9952765 - 9952913
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    ||||||||||||| |||||| ||||  |||||||| | |||| ||| ||||||||||||| ||| ||||   ||||||||||||  ||||||||||||||    
T  9952765 caacactctcttt-gaacactctcttaaatactcattatcttattggtttaaatcattgtgggtttacactttgaaaattgaactcacacaaagtggtgg 9952863  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
     |||| ||||||||||||||| ||||| | |||||| |||||||||||||    
T  9952864 gacatgcattgatttcatccaataaaaaaatgagtgctagagagagtgtt 9952913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 127 - 273
Target Start/End: Complemental strand, 5980052 - 5979904
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    |||||||||||||||||||| |||||||||||||||| |||| ||| || ||| ||||||  ||  |||   ||||||||||||| ||||||||||||||    
T  5980052 caacactctcttttgaacactctctctaatactcactctcttattggtt-aaaccattgtgagttcacactttgaaaattgaacccacacaaagtggtgg 5979954  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
     |||||||||||| ||||||| || |||||||  |  |||||||||||||    
T  5979953 gacatacattgatctcatccaatagaagagtgtctactagagagagtgtt 5979904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 127 - 273
Target Start/End: Original strand, 36804846 - 36804995
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctacat---gaaaattgaaccaacacaaagtggtgg 223  Q
    |||||||||||||| ||||  |||||||||||| ||| |||| ||||||||||| ||||| | | || ||   |||||||||||| ||||||| ||||||    
T  36804846 caacactctcttttcaacattctctctaatacttactctcttattgatttaaattattgtggatgtatattttgaaaattgaacccacacaaaatggtgg 36804945  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
     ||||||||||||| |||||| ||| | ||| ||| ||||||||||||||    
T  36804946 gacatacattgattccatccaataatatagttagtattagagagagtgtt 36804995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 160 - 269
Target Start/End: Complemental strand, 8914911 - 8914799
Alignment:
Q  160 cactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtga 256  Q
    |||| |||| ||| ||||||||||||| ||||||||   |||||| |||||| |||||||||||||| |||||||||| ||| ||||| | |||||||||    
T  8914911 cactctcttattggtttaaatcattgtgggtctacactttgaaaaatgaacccacacaaagtggtgggacatacattggttttatccaatgaaagagtga 8914812  T
Q  257 gtgttagagagag 269  Q
    |||||||||||||    
T  8914811 gtgttagagagag 8914799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 131 - 288
Target Start/End: Original strand, 28413881 - 28414040
Alignment:
Q  131 actctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcaca 227  Q
    |||||||||||||||| | | |||||||||| | | || ||| ||||||||||| | |||||| |   ||||||||||||  |||||||||||||| |||    
T  28413881 actctcttttgaacactcgc-ctaatactcattcttttattggtttaaatcattatgggtctatactttgaaaattgaactcacacaaagtggtgggaca 28413979  T
Q  228 tacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
    ||||||||||||||| | ||||| |||||| | |||||||||||||  || ||||||||||    
T  28413980 tacattgatttcatcgaataaaaaagtgagcgctagagagagtgttgaaaagtgagtgttg 28414040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 127 - 288
Target Start/End: Original strand, 35151736 - 35151900
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    |||||||||||||||||||| || | ||||| |||||||||| ||  ||| ||| ||||| ||||||||   | ||||||||| |  |||||| ||||||    
T  35151736 caacactctcttttgaacactctatttaatattcactttcttattagtttgaattattgtgggtctacactttaaaaattgaatccccacaaaatggtgg 35151835  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
     |||||||||||||||||||| ||||||||| | || || | ||||||||| || ||||||||||    
T  35151836 gacatacattgatttcatccaataaaagagtaaatgctaaaaagagtgttaaaaagtgagtgttg 35151900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 127 - 274
Target Start/End: Original strand, 6098784 - 6098932
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    |||||||||||||| ||||  |||||||||||||||| |||| ||||||||||| ||||| | ||||||   ||||||||||||   |||||||||||||    
T  6098784 caacactctcttttaaacattctctctaatactcactctcttattgatttaaattattgtggatctacactttgaaaattgaacatgcacaaagtggtgg 6098883  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtta 274  Q
     | ||||  | |||||||||  |||||  ||||||||||||||||||||||    
T  6098884 gatatac--taatttcatcctataaaaatgtgagtgttagagagagtgtta 6098932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 148 - 267
Target Start/End: Complemental strand, 43506687 - 43506566
Alignment:
Q  148 ctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatacattgatttcatcca 244  Q
    |||||||||||||||| |||| |||  |||||||||||| ||||||||   ||||| | ||||| |||||||||||||| |||||||||||||  |||||    
T  43506687 ctctctaatactcactctcttattggcttaaatcattgtgggtctacacattgaaagtagaacccacacaaagtggtggaacatacattgattatatcca 43506588  T
Q  245 gtaaaagagtgagtgttagagag 267  Q
     ||||| ||||||||||||||||    
T  43506587 ataaaa-agtgagtgttagagag 43506566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 127 - 272
Target Start/End: Original strand, 13407330 - 13407479
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtc-taca---tgaaaattgaaccaacacaaagtggtg 222  Q
    |||||||||||||||||||| |||||||| ||||| | |||  |||  |||||||| ||| |||| ||||   ||||||| ||||| ||  ||| |||||    
T  13407330 caacactctcttttgaacactctctctaacactcattctctcattgggttaaatcaatgtgggtcatacactttgaaaatagaacccacttaaaatggtg 13407429  T
Q  223 gcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgt 272  Q
    | |||||||||||||| ||||| ||||| ||| |||||||||||||||||    
T  13407430 ggacatacattgattttatccaataaaaaagttagtgttagagagagtgt 13407479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 142 - 288
Target Start/End: Complemental strand, 41727588 - 41727439
Alignment:
Q  142 aacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatacattgattt 238  Q
    ||||| |||||||||||||||| |||||||| ||||||||||| |  |||||||   | ||||  ||||| |||||||| ||||| ||||||||||||||    
T  41727588 aacactctctctaatactcactctcttgttggtttaaatcattatgagtctacacattaaaaacagaacctacacaaagcggtgggacatacattgattt 41727489  T
Q  239 catccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
     ||| |  |||||||||| || || ||||||||||  || ||||||||||    
T  41727488 tatctaacaaaagagtgattgctaaagagagtgttcaaaagtgagtgttg 41727439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 124 - 272
Target Start/End: Complemental strand, 45246610 - 45246459
Alignment:
Q  124 tatcaacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtgg 220  Q
    |||||||||||||||||||| || |||||  |||| | || |||| |||||||||||||||| || ||||||   || |||| ||||   || |||||||    
T  45246610 tatcaacactctcttttgaatactctctcctataccccctctcttattgatttaaatcattgcagatctacactttggaaatagaactcgcataaagtgg 45246511  T
Q  221 tggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgt 272  Q
    ||  |||||||||||||| ||||| ||||| |||||||| || |||||||||    
T  45246510 tgagacatacattgattttatccaataaaatagtgagtgctaaagagagtgt 45246459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 196 - 259
Target Start/End: Complemental strand, 31301216 - 31301153
Alignment:
Q  196 tgaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtg 259  Q
    ||||||| ||||  |||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  31301216 tgaaaatagaactcacacaaagtggtggaacatacattgatttcatccaataaaagagtgagtg 31301153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 196 - 271
Target Start/End: Complemental strand, 35689581 - 35689506
Alignment:
Q  196 tgaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtg 271  Q
    ||||||| ||||  ||| |||||||||| |||||||||||||||||||| ||||| |||||||| |||||||||||    
T  35689581 tgaaaatggaactcacataaagtggtgggacatacattgatttcatccaataaaaaagtgagtgctagagagagtg 35689506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 276
Target Start/End: Original strand, 17741555 - 17741686
Alignment:
Q  148 ctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatacattgatttcatcca 244  Q
    |||||||||||||| ||  || ||| |||||| |||| ||||||||||   ||||||||||||   |||||| |||||| ||||||||||||||||||||    
T  17741555 ctctctaatactcatttctttattggtttaaaccattataggtctacactttgaaaattgaactctcacaaaatggtgggacatacattgatttcatcca 17741654  T
Q  245 gtaaaagagtgagtgttagagagagtgttaga 276  Q
     ||||  | |  ||| ||||||||||||||||    
T  17741655 ataaacaattacgtgctagagagagtgttaga 17741686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 199 - 267
Target Start/End: Complemental strand, 6387659 - 6387591
Alignment:
Q  199 aaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagag 267  Q
    |||| ||||| ||| ||| |||||| |||||||||||||| ||||| ||||||||||||||||||||||    
T  6387659 aaatggaacccacataaaatggtgggacatacattgattttatccaataaaagagtgagtgttagagag 6387591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 273
Target Start/End: Original strand, 7493353 - 7493503
Alignment:
Q  131 actctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaa-ccaacacaaagtggtggcac 226  Q
    |||||||| ||||||| || ||||||||||||| |||| ||| |||||||||||||  |||||||   ||||||| ||| |||||||||||||||   ||    
T  7493353 actctcttatgaacactctttctaatactcactctcttattggtttaaatcattgtgagtctacactttgaaaatagaacccaacacaaagtggtaagac 7493452  T
Q  227 ataca----ttgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    | |||     |||||||||||| ||||| | | ||||||||||||||||||    
T  7493453 acacaatatatgatttcatccaataaaaaaataagtgttagagagagtgtt 7493503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 266
Target Start/End: Complemental strand, 35797530 - 35797426
Alignment:
Q  165 tcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgtt 261  Q
    |||| ||||||||||||||||| | | ||||   | ||||||||||   ||||||||||||| |||||||||||||| ||||| ||||||||||| || |    
T  35797530 tcttattgatttaaatcattgtggatttacactttaaaaattgaactcgcacaaagtggtggaacatacattgattttatccaataaaagagtgaatgct 35797431  T
Q  262 agaga 266  Q
    |||||    
T  35797430 agaga 35797426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 228 - 273
Target Start/End: Original strand, 13856506 - 13856551
Alignment:
Q  228 tacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||    
T  13856506 tacattgatttcatccaataaaagagtgggtgttagagagagtgtt 13856551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 5727403 - 5727335
Alignment:
Q  129 acactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtag-gtctacat 196  Q
    ||||| |||||| ||||||||||||| |||||||||| || ||| ||||||||||||||| ||||||||    
T  5727403 acactttcttttaaacaccctctctagtactcacttttttattggtttaaatcattgtagagtctacat 5727335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 273
Target Start/End: Complemental strand, 14236496 - 14236362
Alignment:
Q  142 aacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatacattgattt 238  Q
    ||||| |||||||||||||||| |||||||| ||||||| |||||  | |||||   | ||||||||||  |||||||||||||| |||||  || ||||    
T  14236496 aacactctctctaatactcactctcttgttggtttaaattattgtgcgcctacactttcaaaattgaacttacacaaagtggtgggacatattttaattt 14236397  T
Q  239 catccagtaaaagagtgagtgttagagagagtgtt 273  Q
    | |||| ||||| | |||||| |||| | ||||||    
T  14236396 cttccaataaaaaaatgagtggtagaaaaagtgtt 14236362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 229 - 273
Target Start/End: Original strand, 16441919 - 16441963
Alignment:
Q  229 acattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||    
T  16441919 acattgatttcatccagtaaaagagtgagtgttatagatagtgtt 16441963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 273
Target Start/End: Complemental strand, 17915985 - 17915840
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggt-ctacatgaaaattgaaccaacacaaagtggtggca 225  Q
    ||||||||| |||| ||||| |||||||||||||||||| || ||  |||||||||||||| || ||   |||||||| |||||||||||| |||| | |    
T  17915985 caacactcttttttaaacactctctctaatactcactttattattagtttaaatcattgtaagtact--ttgaaaattaaaccaacacaaaatggtagga 17915888  T
Q  226 catacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    ||| | ||  ||| ||| | ||||||||| ||||||||| ||| ||||    
T  17915887 cattcgttatttttatctaataaaagagtaagtgttagatagaatgtt 17915840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 214 - 273
Target Start/End: Original strand, 16314372 - 16314431
Alignment:
Q  214 aaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    |||||||||| ||||||||| |||| ||||| ||||||||||||||| ||||||| ||||    
T  16314372 aaagtggtggaacatacattaattttatccaataaaagagtgagtgtaagagagaatgtt 16314431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 186
Target Start/End: Original strand, 5095768 - 5095826
Alignment:
Q  128 aacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgt 186  Q
    ||||||| ||||| |||| ||||||||||||||||| |||| ||| |||||||||||||    
T  5095768 aacactcacttttaaacatcctctctaatactcactctcttattggtttaaatcattgt 5095826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 267
Target Start/End: Complemental strand, 17716981 - 17716881
Alignment:
Q  170 ttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagaga 266  Q
    ||||||||| ||||||| ||||||||   |||||||| |||| ||| ||| | |||| ||||| |||||||||||||| |||||  |||||||||| |||    
T  17716981 ttgatttaactcattgtgggtctacactttgaaaattaaacccacataaaatagtgggacatatattgatttcatccaataaaactgtgagtgttaaaga 17716882  T
Q  267 g 267  Q
    |    
T  17716881 g 17716881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 214 - 272
Target Start/End: Complemental strand, 23685214 - 23685156
Alignment:
Q  214 aaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgt 272  Q
    |||||||||| |||||||||||||||||||| ||||| |||||||| |  |||||||||    
T  23685214 aaagtggtgggacatacattgatttcatccaataaaatagtgagtgcttaagagagtgt 23685156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 269
Target Start/End: Complemental strand, 1961383 - 1961310
Alignment:
Q  196 tgaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagag 269  Q
    ||||||||||||| || ||||||||||| || ||| ||||||| ||||| ||||||| | |||| |||||||||    
T  1961383 tgaaaattgaacccacgcaaagtggtgggacgtaccttgattttatccaataaaagattaagtggtagagagag 1961310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 204 - 273
Target Start/End: Original strand, 7599509 - 7599578
Alignment:
Q  204 gaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    ||||| ||| |||||| ||| | |||||||||||||||||| |||||||||  ||| |||||||||||||    
T  7599509 gaacccacataaagtgctgggatatacattgatttcatccaataaaagagtaggtgctagagagagtgtt 7599578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 286
Target Start/End: Original strand, 11962696 - 11962850
Alignment:
Q  134 ctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatac 230  Q
    ||||||||||||| ||   |||||||| |||| || ||| ||||||||||| | | ||||||   ||||||||||||| ||| ||| |||||| | ||||    
T  11962696 ctcttttgaacactcttgttaatactcgcttttttattggtttaaatcatt-tggatctacactttgaaaattgaacctacataaaatggtgggatatac 11962794  T
Q  231 attgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgt 286  Q
     ||||||| || || ||||||||||||| ||| |||| |||||  || ||||||||    
T  11962795 tttgattttattcaataaaagagtgagtattaaagagcgtgttgaaaagtgagtgt 11962850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 267
Target Start/End: Original strand, 45218614 - 45218667
Alignment:
Q  214 aaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagag 267  Q
    |||||||||| |||  ||||||||||||||| |||||||| |||||||||||||    
T  45218614 aaagtggtgggacacgcattgatttcatccaataaaagagcgagtgttagagag 45218667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 127 - 258
Target Start/End: Complemental strand, 9193555 - 9193421
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    ||||||||||||||| ||||  ||  |||||| || ||| || ||| ||| ||| ||||||||||||||   ||||||||||||  ||||||||| |||     
T  9193555 caacactctcttttgtacacgatcattaatacacatttttttattggttttaattattgtaggtctacactttgaaaattgaacttacacaaagtagtga 9193456  T
Q  224 cacatacattgatttcatccagtaaaagagtgagt 258  Q
     ||||||| | |||||||| | ||||||| |||||    
T  9193455 gacatacactaatttcatcaaataaaagaatgagt 9193421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 228 - 272
Target Start/End: Complemental strand, 44709340 - 44709296
Alignment:
Q  228 tacattgatttcatccagtaaaagagtgagtgttagagagagtgt 272  Q
    |||||||||||||  || |||||||||||||||||||||||||||    
T  44709340 tacattgatttcacacaataaaagagtgagtgttagagagagtgt 44709296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 273
Target Start/End: Complemental strand, 9192100 - 9192025
Alignment:
Q  198 aaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    ||||||||||| |||||||||||||| | |||||||||||| ||||  | ||||||| ||| ||| || |||||||    
T  9192100 aaaattgaacccacacaaagtggtgggatatacattgattttatccgatgaaagagtaagtattaaagtgagtgtt 9192025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 271
Target Start/End: Complemental strand, 29011137 - 29011079
Alignment:
Q  213 caaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtg 271  Q
    ||||||||| | |||||||||  ||||||||| ||| ||| ||||||||||||||||||    
T  29011137 caaagtggtaggacatacattagtttcatccattaagagaatgagtgttagagagagtg 29011079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 127 - 236
Target Start/End: Complemental strand, 34952616 - 34952504
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    ||||||| | |||||||||| |||||||||||| | |||  | ||| ||||||||||||  ||||||||   |||||||||||    |||||| ||||||    
T  34952616 caacactattttttgaacactctctctaatacttatttttctcttggtttaaatcattgcgggtctacatattgaaaattgaaatcccacaaaatggtgg 34952517  T
Q  224 cacatacattgat 236  Q
     ||||||||||||    
T  34952516 gacatacattgat 34952504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 218 - 288
Target Start/End: Complemental strand, 39023509 - 39023439
Alignment:
Q  218 tggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
    |||||| |||||||||||||||||||| ||||  | |||||| ||||||||  |||| || ||||||||||    
T  39023509 tggtgggacatacattgatttcatccaataaataaatgagtgctagagagaccgttaaaacgtgagtgttg 39023439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 277
Target Start/End: Complemental strand, 14195266 - 14195225
Alignment:
Q  236 tttcatccagtaaaagagtgagtgttagagagagtgttagaa 277  Q
    ||||||||| ||| ||| ||||||||||||||||||||||||    
T  14195266 tttcatccaataagagaatgagtgttagagagagtgttagaa 14195225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 16441873 - 16441828
Alignment:
Q  228 tacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    ||||| |||||||  || ||||||||||||||||||||||||||||    
T  16441873 tacatagatttcactcaataaaagagtgagtgttagagagagtgtt 16441828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 229 - 269
Target Start/End: Complemental strand, 9905879 - 9905839
Alignment:
Q  229 acattgatttcatccagtaaaagagtgagtgttagagagag 269  Q
    |||||||||||||||||||||||||||  ||||||| ||||    
T  9905879 acattgatttcatccagtaaaagagtggatgttagaaagag 9905839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 127 - 250
Target Start/End: Complemental strand, 13214668 - 13214542
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    ||||| ||| |||||||||| ||| ||||||||| || |||| ||  |||| |  ||||| ||||||||   ||||||||||| | ||||||| || |||    
T  13214668 caacattctattttgaacactctccctaatactcgctctcttattagtttataatattgtgggtctacactttgaaaattgaatctacacaaaatgatgg 13214569  T
Q  224 cacatacattgatttcatccagtaaaa 250  Q
     ||||||||| ||| |||||| |||||    
T  13214568 gacatacattaattccatccaataaaa 13214542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 250 - 286
Target Start/End: Complemental strand, 28700600 - 28700564
Alignment:
Q  250 agagtgagtgttagagagagtgttagaaggtgagtgt 286  Q
    |||||||||||||||||||||||||||| | ||||||    
T  28700600 agagtgagtgttagagagagtgttagaaagagagtgt 28700564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 3e-34; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 127 - 288
Target Start/End: Original strand, 26980269 - 26980433
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctacat---gaaaattgaaccaacacaaagtggtgg 223  Q
    |||||||||||||| ||||| |||| ||||||||||| |||| ||||||||||||||||| | | || ||   |||||||||||  ||||||| ||||||    
T  26980269 caacactctcttttcaacactctctataatactcactctcttattgatttaaatcattgtggatgtatattttgaaaattgaactcacacaaaatggtgg 26980368  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
     |||||||||||||||||||| ||| ||||||||| ||||||||||||||  || ||||||||||    
T  26980369 gacatacattgatttcatccaataatagagtgagtattagagagagtgttgaaaagtgagtgttg 26980433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 131 - 272
Target Start/End: Original strand, 19101612 - 19101756
Alignment:
Q  131 actctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcaca 227  Q
    |||||||||||||||| ||||||||||||||||||||| ||| |||||||||||| || ||||||   ||||||| ||||   || |||||||||| |||    
T  19101612 actctcttttgaacactctctctaatactcactttcttattggtttaaatcattgcagatctacactttgaaaatagaactcgcataaagtggtgggaca 19101711  T
Q  228 tacattgatttcatccagtaaaagagtgagtgttagagagagtgt 272  Q
    ||||||||||||||||| ||||| |||||||| || |||||||||    
T  19101712 tacattgatttcatccaataaaatagtgagtgctaaagagagtgt 19101756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 133 - 274
Target Start/End: Original strand, 41948159 - 41948303
Alignment:
Q  133 tctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacata 229  Q
    |||||||||||||| |||||||| ||||||| |||| ||||||||||||||||| | | ||||   |||||||||||||||||||||||||| | | |||    
T  41948159 tctcttttgaacactctctctaacactcactctcttattgatttaaatcattgtggatttacactttgaaaattgaaccaacacaaagtggtagaatata 41948258  T
Q  230 cattgatttcatccagtaaaagagtgagtgttagagagagtgtta 274  Q
    ||||||||| ||||| ||||||||||||| ||||| | |||||||    
T  41948259 cattgattttatccaataaaagagtgagtattagaaatagtgtta 41948303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 127 - 288
Target Start/End: Original strand, 6133632 - 6133795
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    ||||||||||||||||||| ||||||||||||||||| |||| ||| ||||| ||||||| ||| || |   ||||||||||||| ||||||  ||||||    
T  6133632 caacactctcttttgaacatcctctctaatactcactctcttattggtttaa-tcattgtgggtgtagactttgaaaattgaacccacacaatatggtgg 6133730  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
     ||||| |||||||||||||| |||||| ||||||| |||||||| ||||  || ||||||||||    
T  6133731 gacatatattgatttcatccaataaaagggtgagtgctagagagattgttgaaaagtgagtgttg 6133795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 128 - 267
Target Start/End: Complemental strand, 2225396 - 2225254
Alignment:
Q  128 aacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggc 224  Q
    ||||||||||||||||||| || | | |||||||||||||| ||| ||||||||| ||| ||||||||   || |||  ||||| ||||||||||||||     
T  2225396 aacactctcttttgaacacgctttgtgatactcactttcttattggtttaaatcactgtcggtctacactttgtaaaccgaacccacacaaagtggtggg 2225297  T
Q  225 acatacattgatttcatccagtaaaagagtgagtgttagagag 267  Q
    |||||||||||||||||||| |||||||||| ||| |||||||    
T  2225296 acatacattgatttcatccaataaaagagtgggtgctagagag 2225254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 138 - 274
Target Start/End: Complemental strand, 33193212 - 33193073
Alignment:
Q  138 tttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatacattg 234  Q
    |||||||||  ||||||||||||| | |||| ||| ||||||||||||| ||||||||   |||||||||||||  |||||| |||||||||||||||||    
T  33193212 tttgaacactttctctaatactcattctcttattggtttaaatcattgtgggtctacactttgaaaattgaaccctcacaaaatggtggcacatacattg 33193113  T
Q  235 atttcatccagtaaaagagtgagtgttagagagagtgtta 274  Q
    |||||||||| ||||  ||||||| ||| ||||| |||||    
T  33193112 atttcatccaataaataagtgagtattatagagaatgtta 33193073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 142 - 273
Target Start/End: Complemental strand, 29673633 - 29673499
Alignment:
Q  142 aacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatacattgattt 238  Q
    ||||| |||||||||||||||||| || ||| ||||||| ||||||| ||||||   ||||||||||| | ||||||| |||||| ||||| ||||||||    
T  29673633 aacactctctctaatactcacttttttattggtttaaataattgtagttctacactttgaaaattgaaactacacaaaatggtgggacatatattgattt 29673534  T
Q  239 catccagtaaaagagtgagtgttagagagagtgtt 273  Q
     ||||| ||||| | ||||||||||||||||||||    
T  29673533 tatccaataaaataatgagtgttagagagagtgtt 29673499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 128 - 288
Target Start/End: Complemental strand, 25543511 - 25543349
Alignment:
Q  128 aacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtct--acatgaaaattgaaccaacacaaagtggtggca 225  Q
    ||||||||||||||||||| |||||||||||||||| |||| ||| |||||||||||||  | ||  ||||    | |  ||| |||||||||||||| |    
T  25543511 aacactctcttttgaacactctctctaatactcactatcttattggtttaaatcattgtgaggctgcacattgggaatatacctacacaaagtggtggga 25543412  T
Q  226 catacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
    |||| |||||||||||| | ||||||||| ||||||||||||||||||  || ||||||||||    
T  25543411 catatattgatttcatcaaataaaagagtaagtgttagagagagtgtttaaaagtgagtgttg 25543349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 127 - 257
Target Start/End: Original strand, 30678918 - 30679051
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    ||||||||| |||||| ||| |||||||| ||||||| |||| |||  ||||||||||||  |||||||   ||||||||||||| ||||||||||||||    
T  30678918 caacactcttttttgagcactctctctaacactcactctcttattggcttaaatcattgtgagtctacactttgaaaattgaacccacacaaagtggtgg 30679017  T
Q  224 cacatacattgatttcatccagtaaaagagtgag 257  Q
     |||||||||||||| ||||| | ||||||||||    
T  30679018 gacatacattgattttatccattgaaagagtgag 30679051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 127 - 269
Target Start/End: Original strand, 28218053 - 28218200
Alignment:
Q  127 caacactctcttttgaacac--cctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggt 221  Q
    ||||||||||||||||||||  || |||||||||||||| |||| || |||||||| | ||| | ||||||   ||||||||||| | ||||||||||||    
T  28218053 caacactctcttttgaacactcccgctctaatactcactatcttattaatttaaattactgtggttctacactttgaaaattgaatccacacaaagtggt 28218152  T
Q  222 ggcacatacattgatttcatccagtaaaagagtgagtgttagagagag 269  Q
    |  |||||||||||||||||||| ||||||||||| || || ||||||    
T  28218153 gagacatacattgatttcatccaataaaagagtgaatgctaaagagag 28218200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 135 - 288
Target Start/End: Original strand, 10659784 - 10659940
Alignment:
Q  135 tcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacataca 231  Q
    ||||||||||||  |||||||||| |||| |||| ||| |||||||||| || ||||||||   ||||||||||||| |||||||||||| | |||| ||    
T  10659784 tcttttgaacactttctctaatac-cactctcttattggtttaaatcatcgtgggtctacactttgaaaattgaacctacacaaagtggtcggacatcca 10659882  T
Q  232 ttgatttcat-ccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
    |||||||||| |||  |||| ||||||||||||||||||| ||  || ||||||||||    
T  10659883 ttgatttcatcccataaaaaaagtgagtgttagagagagtattgaaaagtgagtgttg 10659940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 127 - 273
Target Start/End: Original strand, 32211791 - 32211940
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    |||||||||||||| |||||  ||| ||||  ||||| |||| ||| ||||||||||||| ||||||||   | ||||||||||  ||||||||| || |    
T  32211791 caacactctcttttcaacactttctttaatgatcactctcttattggtttaaatcattgtgggtctacaccttaaaaattgaactcacacaaagtagttg 32211890  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
     |||||||||||||||||| | |||||||||||||| | |||||||||||    
T  32211891 gacatacattgatttcatctaataaaagagtgagtgctggagagagtgtt 32211940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 127 - 288
Target Start/End: Complemental strand, 11987799 - 11987635
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    |||||||||||||| ||||| || |||||||  |||| ||||  || ||||||||||||| ||||||||   |||||||||||||  ||| |||||||||    
T  11987799 caacactctcttttaaacactctttctaatatccactctcttaatggtttaaatcattgtgggtctacactttgaaaattgaacccgcactaagtggtgg 11987700  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
     ||||||||| |||||||||| |||| || | | |||| |||||||||||  || ||||||||||    
T  11987699 aacatacattaatttcatccaataaatgaataaatgttggagagagtgttgaaaagtgagtgttg 11987635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 142 - 259
Target Start/End: Complemental strand, 41958241 - 41958121
Alignment:
Q  142 aacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatacattgattt 238  Q
    ||||| || ||||||||||||| |||| ||| ||||||||| ||| ||||||||   |||||||||||||  |||||| |||||| ||||||||||||||    
T  41958241 aacactctttctaatactcactctcttattggtttaaatcactgtgggtctacactttgaaaattgaacccccacaaaatggtgggacatacattgattt 41958142  T
Q  239 catccagtaaaagagtgagtg 259  Q
    |||||| |||| |||||||||    
T  41958141 catccaataaatgagtgagtg 41958121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 142 - 273
Target Start/End: Complemental strand, 44272076 - 44271942
Alignment:
Q  142 aacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatacattgattt 238  Q
    ||||| || ||||||||||| ||| || ||||||||||||||||| | ||||||   ||||||||||||| ||| ||| |||||| ||||||||||||||    
T  44272076 aacactctttctaatactcatttttttattgatttaaatcattgttgttctacactttgaaaattgaacctacaaaaaatggtggaacatacattgattt 44271977  T
Q  239 catccagtaaaagagtgagtgttagagagagtgtt 273  Q
    ||| || ||||| ||| |||| || ||||||||||    
T  44271976 cattcaataaaatagtaagtgctaaagagagtgtt 44271942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 127 - 288
Target Start/End: Complemental strand, 8899187 - 8899023
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    ||||| |||||||||||||| |||||||||||||||| |||| ||| ||||||| ||||| |  |||||   ||||||||||||| |||||||| |||||    
T  8899187 caacaatctcttttgaacactctctctaatactcactctcttattggtttaaattattgtggacctacactttgaaaattgaacccacacaaaggggtgg 8899088  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
     |||||| || |||||||| | | ||| ||  |||||||||| || ||||  || ||||||||||    
T  8899087 gacatacctttatttcatctaattaaatagcaagtgttagagggaatgttgaaaagtgagtgttg 8899023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 127 - 273
Target Start/End: Complemental strand, 15928726 - 15928579
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    ||||||||||||||||||||  ||||||||||||||| | || ||| ||||||||| |||| |||||||   ||||||| ||||  ||||||| |||||     
T  15928726 caacactctcttttgaacac--tctctaatactcactcttttattggtttaaatcactgtaagtctacaccttgaaaatagaactcacacaaaatggtga 15928629  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
     ||||||||  ||| |||| | |||||||||| ||| |||||||||||||    
T  15928628 gacatacatgaattccatcaaataaaagagtgggtgctagagagagtgtt 15928579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 127 - 256
Target Start/End: Original strand, 8741230 - 8741362
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    |||||||||||||||||||   ||||||||||||||| |||| ||  |||||||||||||  || || |   ||||||||||||| ||||||| | |||     
T  8741230 caacactctcttttgaacaatttctctaatactcactctcttattagtttaaatcattgtgtgtttatactttgaaaattgaacccacacaaattagtga 8741329  T
Q  224 cacatacattgatttcatccagtaaaagagtga 256  Q
     |||||||||||||||||||| ||||| |||||    
T  8741330 gacatacattgatttcatccaataaaaaagtga 8741362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 127 - 273
Target Start/End: Original strand, 14094007 - 14094157
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtc-taca---tgaaaattgaaccaacacaaagtggtg 222  Q
    |||||||||||||||||||| || | ||| ||||||||| |  |||| | |||||| |||||| | ||||   || |||| ||||| ||| |||||||||    
T  14094007 caacactctcttttgaacactctttgtaacactcactttttgattgagtgaaatcaatgtaggacctacactttggaaatggaacccacataaagtggtg 14094106  T
Q  223 gcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    | |||||||||||||||| ||| ||||| |||||||| | |||||||||||    
T  14094107 ggacatacattgatttcacccaataaaaaagtgagtgctggagagagtgtt 14094157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 131 - 273
Target Start/End: Original strand, 37552962 - 37553105
Alignment:
Q  131 actctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcaca 227  Q
    ||||||||||||||||  ||| ||||||||||| |||| ||||||||||||||||| | ||||||   |||||||  |||| ||  |||||| ||| |||    
T  37552962 actctcttttgaacac--tctttaatactcactctcttattgatttaaatcattgtggatctacactttgaaaataaaacccactaaaagtgatgggaca 37553059  T
Q  228 tacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
     ||||| |||||||||| ||| | ||| |||| |||||||||||||    
T  37553060 aacattaatttcatccaataagaaagtaagtgctagagagagtgtt 37553105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 197 - 261
Target Start/End: Complemental strand, 50539224 - 50539160
Alignment:
Q  197 gaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgtt 261  Q
    |||||||||||| ||| |||||||||| |||||| ||||||||||||| ||||||||||||||||    
T  50539224 gaaaattgaacccacataaagtggtggaacatactttgatttcatccaataaaagagtgagtgtt 50539160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 289
Target Start/End: Complemental strand, 27570398 - 27570233
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    ||||| |||||||||||||| |||||| | | |||||||||| ||  || |||||||||| ||| ||||   | |||||| |||  ||||||| ||||||    
T  27570398 caacattctcttttgaacactctctctcaaattcactttcttattagttcaaatcattgtgggtttacactttaaaaattaaactcacacaaattggtgg 27570299  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttga 289  Q
     |||||  || |||||| ||| ||||||| ||||||| ||||||||||||| || |||| ||||||    
T  27570298 gacatatcttaatttcaaccaataaaagaatgagtgtcagagagagtgttaaaaagtgactgttga 27570233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 127 - 271
Target Start/End: Original strand, 41095615 - 41095763
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtc-taca---tgaaaattgaaccaacacaaagtggtg 222  Q
    |||||||||||||||| ||| |||||||  ||||||||  || |||  | |||||| |||||| | ||||   ||||||| ||||| ||||| |||| ||    
T  41095615 caacactctcttttgagcactctctctagcactcacttatttattgggtgaaatcaatgtaggacctacactttgaaaatggaacccacacagagtgatg 41095714  T
Q  223 gcacatacattgatttcatccagtaaaagagtgagtgttagagagagtg 271  Q
    | |||||||||||||||| ||| |||| ||||||||| |||||||||||    
T  41095715 ggacatacattgatttcacccaataaatgagtgagtgctagagagagtg 41095763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 199 - 269
Target Start/End: Original strand, 50773193 - 50773263
Alignment:
Q  199 aaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagag 269  Q
    |||| ||||| ||| |||||||||| ||||| |||||||| ||||| ||||||||||||||||||||||||    
T  50773193 aaatggaacccacataaagtggtggaacatatattgattttatccaataaaagagtgagtgttagagagag 50773263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 196 - 273
Target Start/End: Original strand, 32848662 - 32848739
Alignment:
Q  196 tgaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    ||||||| ||| | ||| |||||||||| ||||||| |||||||| ||| |||||||||||||| |||||||||||||    
T  32848662 tgaaaatggaatccacataaagtggtgggacatacaatgatttcacccaataaaagagtgagtgctagagagagtgtt 32848739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 11135837 - 11135765
Alignment:
Q  199 aaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtg 271  Q
    |||| ||||| ||| |||||||||| |||||||||||||||| ||| ||||| |||||||| |||||||||||    
T  11135837 aaatggaacccacataaagtggtgggacatacattgatttcacccaataaaatagtgagtgctagagagagtg 11135765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 11430539 - 11430467
Alignment:
Q  199 aaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtg 271  Q
    |||| ||||| ||| |||||||||| |||||||||||||||| ||| |||||||||||||| |||| ||||||    
T  11430539 aaatggaacccacataaagtggtgggacatacattgatttcacccaataaaagagtgagtgctagaaagagtg 11430467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 174 - 273
Target Start/End: Complemental strand, 49730990 - 49730888
Alignment:
Q  174 tttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagt 270  Q
    ||||||||||||| ||||||||   ||||||||||||| ||||||||| |||  ||||| |||  ||| ||| | ||||||||||||||||| |||||||    
T  49730990 tttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtagtgtgacatatattagtttaatctaataaaagagtgagtgttatagagagt 49730891  T
Q  271 gtt 273  Q
    |||    
T  49730890 gtt 49730888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 272
Target Start/End: Original strand, 13114676 - 13114825
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtc-tacat---gaaaattgaaccaacacaaagtggtg 222  Q
    ||||||||||||||| |||| |||||||| ||||||| |||  |||  |||||||| ||| |||  |||||   | |||| ||| | | | |||||||||    
T  13114676 caacactctcttttggacactctctctaacactcactatctcattgggttaaatcaatgtgggttatacattttggaaatggaatccatataaagtggtg 13114775  T
Q  223 gcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgt 272  Q
    | ||||| |||||||| ||| | |||||||||||||||||||||||||||    
T  13114776 ggacatatattgattttatctaataaaagagtgagtgttagagagagtgt 13114825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 214 - 273
Target Start/End: Complemental strand, 18157121 - 18157062
Alignment:
Q  214 aaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    |||||||||| ||||||||| |||||||||| ||||| |||| |||||||||||||||||    
T  18157121 aaagtggtgggacatacattaatttcatccaataaaaaagtgggtgttagagagagtgtt 18157062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 265
Target Start/End: Complemental strand, 35337018 - 35336896
Alignment:
Q  142 aacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctacat---gaaaattgaaccaacacaaagtggtggcacatacattgattt 238  Q
    ||||| |||||||||||||  | |||| ||| |||||||||||||  ||||||||   |||||||||||| |||||||||||||    | ||||||||||    
T  35337018 aacactctctctaatactcgttctcttattggtttaaatcattgtgtgtctacattaagaaaattgaacccacacaaagtggtg----agacattgattt 35336923  T
Q  239 catccagtaaaagagtgagtgttagag 265  Q
    |||||| ||||| | |||||| |||||    
T  35336922 catccaataaaataatgagtgctagag 35336896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 196 - 267
Target Start/End: Complemental strand, 41918096 - 41918025
Alignment:
Q  196 tgaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagag 267  Q
    ||||||| ||| | ||| |||||||||| |||||||||||||||| ||| |||||||||||||| |||||||    
T  41918096 tgaaaatggaatccacataaagtggtgggacatacattgatttcacccaataaaagagtgagtgctagagag 41918025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 261
Target Start/End: Complemental strand, 15468388 - 15468256
Alignment:
Q  132 ctctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctac---atgaaaattgaaccaacacaaagtggtggcacat 228  Q
    |||||||||||||||  |||| |||||| ||| | || || |||||||| ||||| |||||||   |||||||||||||| |||||||||  ||  ||||    
T  15468388 ctctcttttgaacactatctcaaatacttactcttttattaatttaaattattgtgggtctacactatgaaaattgaacccacacaaagtaatgagacat 15468289  T
Q  229 acattgatttcatccagtaaaagagtgagtgtt 261  Q
    |||||||||  ||  | ||||||||||||||||    
T  15468288 acattgattctatttaataaaagagtgagtgtt 15468256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 214 - 272
Target Start/End: Complemental strand, 15523293 - 15523235
Alignment:
Q  214 aaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgt 272  Q
    |||||||||| |||||||||||||||||||| ||||| |||||||| || |||||||||    
T  15523293 aaagtggtgggacatacattgatttcatccaataaaatagtgagtgctaaagagagtgt 15523235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 214 - 272
Target Start/End: Complemental strand, 15531287 - 15531229
Alignment:
Q  214 aaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgt 272  Q
    |||||||||| |||||||||||||||||||| ||||| |||||||| || |||||||||    
T  15531287 aaagtggtgggacatacattgatttcatccaataaaatagtgagtgctaaagagagtgt 15531229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 180
Target Start/End: Original strand, 21466630 - 21466680
Alignment:
Q  130 cactctcttttgaacaccctctctaatactcactttcttgttgatttaaat 180  Q
    ||||||||||||||||| |||||||||| |||||||||| |||||||||||    
T  21466630 cactctcttttgaacactctctctaatattcactttcttattgatttaaat 21466680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 214 - 272
Target Start/End: Complemental strand, 22540451 - 22540393
Alignment:
Q  214 aaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgt 272  Q
    |||||||||| |||||||||||||||||||| ||||| |||||||| || |||||||||    
T  22540451 aaagtggtgggacatacattgatttcatccaataaaatagtgagtgctaaagagagtgt 22540393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 261
Target Start/End: Original strand, 45179274 - 45179390
Alignment:
Q  148 ctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatacattgatttcatcca 244  Q
    |||||||||||||| |||||| || |||||| | ||||| ||| ||||   |||||||||||||  ||||||||| ||| |||||||||||||| || ||    
T  45179274 ctctctaatactcattttcttattaatttaagttattgtgggtttacactttgaaaattgaaccctcacaaagtgatggaacatacattgattttattca 45179373  T
Q  245 gtaaaagagtgagtgtt 261  Q
     |||| || ||||||||    
T  45179374 ataaatgaatgagtgtt 45179390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 214 - 267
Target Start/End: Original strand, 4578674 - 4578727
Alignment:
Q  214 aaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagag 267  Q
    |||||||||| || ||||||||||||| ||| ||||||||||||||||||||||    
T  4578674 aaagtggtgggacctacattgatttcacccaataaaagagtgagtgttagagag 4578727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 39974207 - 39974267
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgta 187  Q
    |||||||||||||||||||  || ||||||||||||| |||| ||| ||||||||||||||    
T  39974207 caacactctcttttgaacattctttctaatactcactctcttattggtttaaatcattgta 39974267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 178 - 288
Target Start/End: Original strand, 3872692 - 3872804
Alignment:
Q  178 aatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtta 274  Q
    ||||||||| ||||||||   || |||||||||| |||||||||||||  ||||| |||||||| ||  | || ||||||||||| |||||||||||||     
T  3872692 aatcattgtgggtctacactttggaaattgaacctacacaaagtggtgtgacatatattgattt-atttaatagaagagtgagtgctagagagagtgttg 3872790  T
Q  275 gaaggtgagtgttg 288  Q
     || ||||||||||    
T  3872791 aaaagtgagtgttg 3872804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 127 - 186
Target Start/End: Original strand, 16948536 - 16948595
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgt 186  Q
    ||||||||||| |||||||   ||||||||||||||| |||| |||||||||||||||||    
T  16948536 caacactctctgttgaacattttctctaatactcactctcttattgatttaaatcattgt 16948595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 288
Target Start/End: Complemental strand, 931523 - 931383
Alignment:
Q  151 tctaatactcactttcttgttgatttaaatcattgtaggtctacat---gaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagta 247  Q
    ||||||| ||||| | || ||| ||||||||||||| ||| || ||   |||||||||||| ||| ||| || ||| |||||||||| || ||| || ||    
T  931523 tctaatattcactcttttattggtttaaatcattgtgggtgtatattttgaaaattgaacccacaaaaaatgatgggacatacattgcttccattcaata 931424  T
Q  248 aaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
    ||||||||||| ||||||| || |||  || ||||||||||    
T  931423 aaagagtgagtattagagatagagttgaaaagtgagtgttg 931383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 228 - 270
Target Start/End: Complemental strand, 13388403 - 13388361
Alignment:
Q  228 tacattgatttcatccagtaaaagagtgagtgttagagagagt 270  Q
    ||||||||||||||||| ||||| |||||||||||||||||||    
T  13388403 tacattgatttcatccaataaaaaagtgagtgttagagagagt 13388361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 235 - 277
Target Start/End: Complemental strand, 24886099 - 24886057
Alignment:
Q  235 atttcatccagtaaaagagtgagtgttagagagagtgttagaa 277  Q
    |||||| ||| ||||||||||||||||||||||||||||||||    
T  24886099 atttcacccaataaaagagtgagtgttagagagagtgttagaa 24886057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 37525655 - 37525560
Alignment:
Q  174 tttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagaga 266  Q
    ||||||||||||||| |||| |   ||||||||||||| ||| ||| |||||| |||||||| | ||| ||||| | ||||||||| |||||||||    
T  37525655 tttaaatcattgtagatctagactttgaaaattgaacccacataaaatggtggaacatacatgggttttatccaatgaaagagtgaatgttagaga 37525560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 267
Target Start/End: Original strand, 43851113 - 43851185
Alignment:
Q  195 atgaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagag 267  Q
    |||||||| ||||| | | |||||||||| |||||||||||||||| ||| |||| ||||||||  |||||||    
T  43851113 atgaaaatggaacccatataaagtggtgggacatacattgatttcacccaataaatgagtgagtactagagag 43851185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 12767341 - 12767392
Alignment:
Q  133 tctcttttgaacaccctctctaatactcactttcttgttgatttaaatcatt 184  Q
    ||||||||||| ||||||||||||||||||| | || ||| |||||||||||    
T  12767341 tctcttttgaaaaccctctctaatactcactcttttattggtttaaatcatt 12767392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 273
Target Start/End: Original strand, 14341018 - 14341077
Alignment:
Q  214 aaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    |||||||||| ||||| |||  ||||||||| ||||| | ||||||||||||||||||||    
T  14341018 aaagtggtgggacatatattagtttcatccaataaaaaaatgagtgttagagagagtgtt 14341077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 261
Target Start/End: Complemental strand, 15660976 - 15660929
Alignment:
Q  214 aaagtggtggcacatacattgatttcatccagtaaaagagtgagtgtt 261  Q
    |||||||||| |||| ||||||||| ||||| ||||||||||||||||    
T  15660976 aaagtggtgggacatgcattgattttatccaataaaagagtgagtgtt 15660929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 271
Target Start/End: Complemental strand, 28110040 - 28109894
Alignment:
Q  128 aacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtagg-tctaca--tgaaaattgaaccaacacaaagtggtggc 224  Q
    ||||||||||||| |  ||  ||||||||||||||||| || |||  | |||||||| |||| ||||||  |  |||| ||||| ||| ||| ||||||     
T  28110040 aacactctcttttaagtactttctctaatactcacttttttattggatgaaatcattctaggatctacactttgaaatggaacccacataaaatggtgga 28109941  T
Q  225 acatacattgatttcatccagtaaaagagtgagtgttagagagagtg 271  Q
    |||| ||||||||||| ||| ||||| |||||||| |||||| ||||    
T  28109940 acatgcattgatttcacccaataaaaaagtgagtgctagagaaagtg 28109894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 273
Target Start/End: Complemental strand, 44739201 - 44739142
Alignment:
Q  214 aaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    |||||||||| ||||||||| ||||||  ||  ||||||||||||| |||||||||||||    
T  44739201 aaagtggtgggacatacattaatttcactcaagaaaagagtgagtgctagagagagtgtt 44739142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 231 - 270
Target Start/End: Original strand, 50424980 - 50425019
Alignment:
Q  231 attgatttcatccagtaaaagagtgagtgttagagagagt 270  Q
    |||||||| ||||| |||||||||||||||||||||||||    
T  50424980 attgattttatccaataaaagagtgagtgttagagagagt 50425019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 228 - 270
Target Start/End: Original strand, 11135853 - 11135895
Alignment:
Q  228 tacattgatttcatccagtaaaagagtgagtgttagagagagt 270  Q
    ||||||||||||| ||| |||||||||||||| ||||||||||    
T  11135853 tacattgatttcacccaataaaagagtgagtgctagagagagt 11135895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 178 - 291
Target Start/End: Complemental strand, 31074838 - 31074722
Alignment:
Q  178 aatcattgtaggtctacat---gaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtta 274  Q
    ||||||||| |||||||||   |||||| ||| ||||| |||||| | | ||||  |||||||||||| | ||||||||| | |||||| |||||||||     
T  31074838 aatcattgtgggtctacattttgaaaatagaatcaacataaagtgttaggacatgtattgatttcatcaaataaaagagtaaatgttagggagagtgttc 31074739  T
Q  275 gaaggtgagtgttgata 291  Q
     ||  ||||||||||||    
T  31074738 aaacatgagtgttgata 31074722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 259
Target Start/End: Complemental strand, 9165385 - 9165340
Alignment:
Q  214 aaagtggtggcacatacattgatttcatccagtaaaagagtgagtg 259  Q
    |||||||| | |||||||||||||||| ||| ||||||||||||||    
T  9165385 aaagtggtaggacatacattgatttcacccaataaaagagtgagtg 9165340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 259
Target Start/End: Original strand, 13388436 - 13388481
Alignment:
Q  214 aaagtggtggcacatacattgatttcatccagtaaaagagtgagtg 259  Q
    |||||||||  |||||||||||||||| ||| ||||||||||||||    
T  13388436 aaagtggtgagacatacattgatttcacccaataaaagagtgagtg 13388481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 277
Target Start/End: Complemental strand, 19078972 - 19078931
Alignment:
Q  236 tttcatccagtaaaagagtgagtgttagagagagtgttagaa 277  Q
    ||||| ||| ||| ||||||||||||||||||||||||||||    
T  19078972 tttcacccaataagagagtgagtgttagagagagtgttagaa 19078931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 277
Target Start/End: Complemental strand, 19126860 - 19126819
Alignment:
Q  236 tttcatccagtaaaagagtgagtgttagagagagtgttagaa 277  Q
    ||||| ||| ||| ||||||||||||||||||||||||||||    
T  19126860 tttcacccaataagagagtgagtgttagagagagtgttagaa 19126819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 273
Target Start/End: Complemental strand, 28274847 - 28274810
Alignment:
Q  236 tttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    ||||||||| ||| ||||||||||||||||||||||||    
T  28274847 tttcatccaataagagagtgagtgttagagagagtgtt 28274810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 214 - 266
Target Start/End: Original strand, 5602657 - 5602709
Alignment:
Q  214 aaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagaga 266  Q
    |||||||||| ||||| ||| |||||||||| ||| ||||| |||||||||||    
T  5602657 aaagtggtgggacatatattaatttcatccaataagagagtaagtgttagaga 5602709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 196 - 268
Target Start/End: Complemental strand, 36566997 - 36566925
Alignment:
Q  196 tgaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagaga 268  Q
    ||||||| ||||| | | |||||| ||  |||||||||||||||||||| ||||| ||| ||||||| |||||    
T  36566997 tgaaaatagaacccaaataaagtgatgagacatacattgatttcatccaataaaatagtaagtgttaaagaga 36566925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 131 - 163
Target Start/End: Complemental strand, 36567059 - 36567027
Alignment:
Q  131 actctcttttgaacaccctctctaatactcact 163  Q
    |||||||||||||||| ||||||||||||||||    
T  36567059 actctcttttgaacacactctctaatactcact 36567027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 127 - 163
Target Start/End: Complemental strand, 39019740 - 39019704
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcact 163  Q
    ||||||||||||||||||||  |||||||||||||||    
T  39019740 caacactctcttttgaacactttctctaatactcact 39019704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 39039470 - 39039526
Alignment:
Q  232 ttgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
    ||||||||||||| |||||||||||||| || | ||||||||  || ||||||||||    
T  39039470 ttgatttcatccaataaaagagtgagtgctaaaaagagtgttgaaaagtgagtgttg 39039526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 133 - 259
Target Start/End: Complemental strand, 39499564 - 39499433
Alignment:
Q  133 tctcttttgaacaccctctctaatact---cactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcac 226  Q
    ||||||||||||| | ||||||||| |   ||||||||| |||| |||||||||||| | ||||||   ||||||||||||  ||| |||||| |   ||    
T  39499564 tctcttttgaacatcttctctaatagtattcactttcttattgaattaaatcattgtggatctacattttgaaaattgaactcacaaaaagtgatatgac 39499465  T
Q  227 atacattgatttcatccagtaaaagagtgagtg 259  Q
    |||||||||||| ||| | | ||||||||||||    
T  39499464 atacattgattttatctaat-aaagagtgagtg 39499433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 5e-33; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 127 - 270
Target Start/End: Original strand, 28490729 - 28490875
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    |||||||||||||||||||| |||||||||||||||| |||| ||| ||||||| ||||| ||||||||   | ||||||||||  ||||||||||||||    
T  28490729 caacactctcttttgaacactctctctaatactcactctcttattggtttaaattattgtgggtctacactttcaaaattgaacttacacaaagtggtgg 28490828  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagt 270  Q
     |||||| ||||||||||||| ||||| ||||| || ||||||||||    
T  28490829 gacatactttgatttcatccaataaaaaagtgaatgctagagagagt 28490875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 142 - 259
Target Start/End: Original strand, 10141998 - 10142118
Alignment:
Q  142 aacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatacattgattt 238  Q
    ||||| |||||||| ||||||| |||| ||||||||||| ||||| ||||||||   ||||||| |||||||||||||||||||| ||||||||||||||    
T  10141998 aacactctctctaacactcactctcttattgatttaaataattgttggtctacactttgaaaatggaaccaacacaaagtggtgggacatacattgattt 10142097  T
Q  239 catccagtaaaagagtgagtg 259  Q
     ||||| ||||||||||||||    
T  10142098 tatccaataaaagagtgagtg 10142118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 127 - 258
Target Start/End: Original strand, 5413741 - 5413878
Alignment:
Q  127 caacactctcttttgaacaccctctc---taatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtgg 220  Q
    |||||||||||||||||||| ||||    ||||||||||||| || ||| ||||||||||| | ||||||||   || |||||||||| |||||||||||    
T  5413741 caacactctcttttgaacactctctactataatactcacttttttattggtttaaatcattatgggtctacactttgtaaattgaacccacacaaagtgg 5413840  T
Q  221 tggcacatacattgatttcatccagtaaaagagtgagt 258  Q
    ||| |||||||||||||||||||| |||||||||||||    
T  5413841 tgggacatacattgatttcatccaataaaagagtgagt 5413878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 127 - 273
Target Start/End: Complemental strand, 34368533 - 34368384
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    |||||||||||||||| ||| ||||||   || |||| |||| ||| ||||||||||||| ||||||||   |||||| |||||| ||||||||||||||    
T  34368533 caacactctcttttgagcactctctctgtcacccactctcttattggtttaaatcattgtgggtctacactttgaaaaatgaacccacacaaagtggtgg 34368434  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
     |||||||||| ||| ||||| | ||||||||||||||||||| ||||||    
T  34368433 aacatacattggttttatccaatgaaagagtgagtgttagagaaagtgtt 34368384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 148 - 273
Target Start/End: Original strand, 28434846 - 28434972
Alignment:
Q  148 ctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatacattgatttcatcca 244  Q
    |||||||||||||| |||||| ||| ||||||||||||| |||||| |   |||||||||||||||||||  ||||||| ||||| |||||||| |||||    
T  28434846 ctctctaatactcattttcttattggtttaaatcattgtgggtctaaactttgaaaattgaaccaacaca--gtggtgggacatatattgattttatcca 28434943  T
Q  245 gtaaaagagtgagtgttagagagagtgtt 273  Q
     ||||||| | ||||||||||||||||||    
T  28434944 ataaaagaattagtgttagagagagtgtt 28434972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 127 - 273
Target Start/End: Original strand, 41105577 - 41105726
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    |||||||||||||||| ||| ||||||||||||| || |||| ||| ||||||||| ||| ||| | ||   ||||||||||||| ||||||||| ||||    
T  41105577 caacactctcttttgagcactctctctaatactcgctctcttattggtttaaatcactgtgggtatgcactttgaaaattgaacccacacaaagtagtgg 41105676  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
     |||| | ||||||||||||| ||||||||| ||| ||| ||||||||||    
T  41105677 gacatcccttgatttcatccaataaaagagtaagttttatagagagtgtt 41105726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 129 - 272
Target Start/End: Original strand, 30325883 - 30326029
Alignment:
Q  129 acactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggca 225  Q
    |||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||  | ||||||   || | || ||||   || |||||||||  |    
T  30325883 acactctcttttgaacactctctctaatactcactttcttattggtttaaatcattgcggatctacactttggagatagaactcgcataaagtggtgaga 30325982  T
Q  226 catacattgatttcatccagtaaaagagtgagtgttagagagagtgt 272  Q
    ||||||||||||||||||| ||||| |||||||| || |||||||||    
T  30325983 catacattgatttcatccaataaaatagtgagtgctaaagagagtgt 30326029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 127 - 287
Target Start/End: Complemental strand, 37455525 - 37455359
Alignment:
Q  127 caacactctcttttgaacaccctc----tctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtg 219  Q
    ||||||||||||||||||||||||    ||||||||||||| |||| ||| ||||| | |||||  |||||||   |||||||||||||  |||||| ||    
T  37455525 caacactctcttttgaacaccctccctctctaatactcactctcttattggtttaatt-attgtgagtctacactttgaaaattgaacccccacaaaatg 37455427  T
Q  220 gtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgtt 287  Q
    |||| |||||||||||||| ||| | |||| ||||| ||| |||||||||||||| ||  ||||||||    
T  37455426 gtggaacatacattgattttatcgaataaatgagtgtgtgctagagagagtgttaaaaaatgagtgtt 37455359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 148 - 273
Target Start/End: Original strand, 17537130 - 17537258
Alignment:
Q  148 ctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatacattgatttcatcca 244  Q
    |||||| ||| ||||| |||| ||| ||||||||||| | | ||||||   |||||||| |||||||| ||| |||||| |||||||||||||| ||| |    
T  17537130 ctctcttatattcactctcttattggtttaaatcattatggatctacactttgaaaattaaaccaacaaaaattggtgggacatacattgatttgatcaa 17537229  T
Q  245 gtaaaagagtgagtgttagagagagtgtt 273  Q
     |||||||||||||| |||||||||||||    
T  17537230 ataaaagagtgagtgatagagagagtgtt 17537258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 134 - 255
Target Start/End: Original strand, 41330407 - 41330531
Alignment:
Q  134 ctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatac 230  Q
    ||||||||||||| |||| |||||||   |||||| ||| |||||||||||||  |||||||   ||||||||||||| |||||||||| ||| ||||||    
T  41330407 ctcttttgaacacactctttaatactacatttcttattggtttaaatcattgtgagtctacactttgaaaattgaacctacacaaagtgatgggacatac 41330506  T
Q  231 attgatttcatccagtaaaagagtg 255  Q
    ||| |||||||| | ||||||||||    
T  41330507 attaatttcatctaataaaagagtg 41330531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 130 - 288
Target Start/End: Original strand, 34384701 - 34384862
Alignment:
Q  130 cactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcac 226  Q
    ||||||||||||||||| |||| ||||||||||| | || | | | |||||||||||  ||||| |   ||||||||||||  ||||||| | |||| ||    
T  34384701 cactctcttttgaacactctctttaatactcactcttttatcggtctaaatcattgtgagtctataatttgaaaattgaactcacacaaaatagtgggac 34384800  T
Q  227 atacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
    |||||||||||||| ||| ||||||| ||||||||| ||| ||| ||| || ||||| ||||    
T  34384801 atacattgatttcacccaataaaagaatgagtgttaaagaaagtattaaaaagtgagcgttg 34384862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 124 - 272
Target Start/End: Original strand, 27592456 - 27592607
Alignment:
Q  124 tatcaacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtgg 220  Q
    |||||||||||||||||||| || |||||   ||| |||| |||| ||| |||||||||||| || ||||||   || |||| ||||   || |||||||    
T  27592456 tatcaacactctcttttgaatactctctcctgtacccactctcttattggtttaaatcattgcagatctacactttggaaatagaactcgcataaagtgg 27592555  T
Q  221 tggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgt 272  Q
    ||  |||||||||||||||||||| ||||| |||||||| || |||||||||    
T  27592556 tgagacatacattgatttcatccaataaaatagtgagtgctaaagagagtgt 27592607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 150 - 259
Target Start/End: Complemental strand, 43405543 - 43405431
Alignment:
Q  150 ctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagt 246  Q
    |||| ||| ||||| |||| ||||||||||||||||| ||||||||   || |||| ||||  | |||||||||||  ||||||||||||||||| || |    
T  43405543 ctctgatattcactctcttattgatttaaatcattgtgggtctacactttggaaatagaacatatacaaagtggtgagacatacattgatttcattcaat 43405444  T
Q  247 aaaagagtgagtg 259  Q
    |||||||||||||    
T  43405443 aaaagagtgagtg 43405431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 42224673 - 42224745
Alignment:
Q  199 aaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtg 271  Q
    |||| ||||| ||| |||||||||| |||||||||||||||| | | |||||||||||||| |||||||||||    
T  42224673 aaatggaacccacataaagtggtgggacatacattgatttcacctaataaaagagtgagtgctagagagagtg 42224745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 267
Target Start/End: Original strand, 10253124 - 10253232
Alignment:
Q  157 actcactttcttgttgatttaaatcattgtaggtctacatgaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtga 256  Q
    |||||||||||| ||| |||||||| |||| ||  ||  || |||| ||||  ||| |||||||||| ||||||||| |||||||||| || ||||||||    
T  10253124 actcactttcttattggtttaaatcgttgtgggatta--tggaaatagaactcacataaagtggtgggacatacattaatttcatccaatagaagagtga 10253221  T
Q  257 gtgttagagag 267  Q
    |||||||||||    
T  10253222 gtgttagagag 10253232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 288
Target Start/End: Original strand, 28223783 - 28223947
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    |||||| |||||||||||| ||||||||||||||||| | || ||| ||||||||||| | |||||| |   |||||||||| || ||||||| | |  |    
T  28223783 caacaccctcttttgaacatcctctctaatactcactcttttattggtttaaatcattatgggtctatactttgaaaattgagcccacacaaaattggtg 28223882  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
     ||||||| | ||||||| || ||||||| | ||||||| ||  ||||||  || ||||||||||    
T  28223883 aacatacaataatttcattcaataaaagaataagtgttaaaggtagtgttgaaaagtgagtgttg 28223947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 288
Target Start/End: Original strand, 28611785 - 28611949
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    |||||||||||||||| ||| |||||||| ||  ||| | || |||||||||||||||||  |||||||   | ||||| ||||  | |||||||| |||    
T  28611785 caacactctcttttgagcactctctctaacaccaactcttttattgatttaaatcattgtgcgtctacactttaaaaatggaactcatacaaagtgatgg 28611884  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
     ||||||| || ||  ||||| | ||||||||| |||||||||||||| |  || ||||||||||    
T  28611885 gacatacactggttatatccaatgaaagagtgaatgttagagagagtgctcaaaagtgagtgttg 28611949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 267
Target Start/End: Complemental strand, 39246750 - 39246638
Alignment:
Q  158 ctcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagt 254  Q
    |||||| |||| ||| ||||||  ||||| ||||||||   |||||| |||||  |||||||||||||| |||||||||||||| ||||| ||| | |||    
T  39246750 ctcactctcttattggtttaaagtattgtgggtctacactttgaaaactgaactcacacaaagtggtgggacatacattgattttatccaataagaaagt 39246651  T
Q  255 gagtgttagagag 267  Q
    || ||||||||||    
T  39246650 gattgttagagag 39246638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 204 - 261
Target Start/End: Original strand, 25564033 - 25564090
Alignment:
Q  204 gaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgtt 261  Q
    ||||| |||||||||||||| ||||||||| |||||||||| |||||| |||||||||    
T  25564033 gaacccacacaaagtggtggaacatacatttatttcatccaataaaagggtgagtgtt 25564090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 40971550 - 40971607
Alignment:
Q  214 aaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtg 271  Q
    |||||||||| ||||||||||||||||  || |||||||||||||| |||||||||||    
T  40971550 aaagtggtgggacatacattgatttcactcaataaaagagtgagtgctagagagagtg 40971607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 273
Target Start/End: Original strand, 25710494 - 25710628
Alignment:
Q  142 aacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatacattgattt 238  Q
    ||||| |||| ||||| ||| | |||| ||| ||||||| ||||| ||||||||   ||||||| ||||  | || ||||||| | ||||||||||||||    
T  25710494 aacactctctttaatattcattctcttattggtttaaattattgtgggtctacactttgaaaatagaactcatacgaagtggtaggacatacattgattt 25710593  T
Q  239 catccagtaaaagagtgagtgttagagagagtgtt 273  Q
    ||  || |||||||||||||| || ||||||||||    
T  25710594 cacacaataaaagagtgagtgataaagagagtgtt 25710628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 127 - 233
Target Start/End: Original strand, 1923559 - 1923668
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    ||||||||| ||||||||| | ||||||||||||| | |||| ||| ||||||||||||||   |||||   | ||||||||||  |||||||||||||     
T  1923559 caacactcttttttgaacatcatctctaatactcattatcttattggtttaaatcattgtaaaactacactttaaaaattgaactcacacaaagtggtgt 1923658  T
Q  224 cacatacatt 233  Q
     |||||||||    
T  1923659 gacatacatt 1923668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 210 - 288
Target Start/End: Complemental strand, 2525661 - 2525583
Alignment:
Q  210 acacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgttagaaggtgagtgttg 288  Q
    |||||||||||||  | |||||||||||||||||| ||||| |  |||||||| ||||||||||| ||  |||||||||    
T  2525661 acacaaagtggtgatagatacattgatttcatccaataaaaaaacgagtgttaaagagagtgttaaaaaatgagtgttg 2525583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 236
Target Start/End: Complemental strand, 14553664 - 14553573
Alignment:
Q  148 ctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatacattgat 236  Q
    |||||||||||||||| |||||||| ||||| | ||||| ||||||||   | ||||||||||||||  ||| |||| | ||||||||||||    
T  14553664 ctctctaatactcactctcttgttggtttaatttattgtgggtctacactttaaaaattgaaccaacgtaaaatggtaggacatacattgat 14553573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 127 - 242
Target Start/End: Complemental strand, 25919384 - 25919266
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    ||||| ||||||||||| ||  ||| ||||| ||| ||| || ||| |||||||||||||  |||||||   |||||||||| || ||||||| |||||     
T  25919384 caacattctcttttgaatactttctttaatattcatttttttattggtttaaatcattgtgagtctacactttgaaaattgatcccacacaaaatggtga 25919285  T
Q  224 cacatacattgatttcatc 242  Q
     ||||| ||||||||||||    
T  25919284 gacatatattgatttcatc 25919266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 226 - 273
Target Start/End: Complemental strand, 1649621 - 1649574
Alignment:
Q  226 catacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    |||||||| |||||||||| ||| | ||||||||||||||||||||||    
T  1649621 catacattaatttcatccaataagatagtgagtgttagagagagtgtt 1649574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 267
Target Start/End: Original strand, 13456244 - 13456315
Alignment:
Q  196 tgaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagag 267  Q
    ||||||| ||||| ||| ||| |||||| | |||||||||||||||||  |||||||||||||  |||||||    
T  13456244 tgaaaatggaacccacataaaatggtgggaaatacattgatttcatccgataaaagagtgagtaatagagag 13456315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 225 - 271
Target Start/End: Complemental strand, 4959350 - 4959304
Alignment:
Q  225 acatacattgatttcatccagtaaaagagtgagtgttagagagagtg 271  Q
    |||||||||||||||| ||| |||||||||| || ||||||||||||    
T  4959350 acatacattgatttcacccaataaaagagtgggtattagagagagtg 4959304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 6263966 - 6263909
Alignment:
Q  214 aaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtg 271  Q
    |||||||||| ||||| |||||||| | ||| |||| ||||||||| |||||||||||    
T  6263966 aaagtggtgggacatatattgattttacccaataaaggagtgagtgatagagagagtg 6263909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 273
Target Start/End: Complemental strand, 43541952 - 43541875
Alignment:
Q  196 tgaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    ||||||||||||  |||||||||| ||  |||||||||||||| || || ||||||||  ||| ||| ||||||||||    
T  43541952 tgaaaattgaactcacacaaagtgatgagacatacattgattttattcaataaaagaggaagtattaaagagagtgtt 43541875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 227 - 271
Target Start/End: Original strand, 4959391 - 4959435
Alignment:
Q  227 atacattgatttcatccagtaaaagagtgagtgttagagagagtg 271  Q
    |||||||||||||  ||| |||||||||||||| |||||||||||    
T  4959391 atacattgatttcccccaataaaagagtgagtgctagagagagtg 4959435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 236 - 272
Target Start/End: Complemental strand, 7584899 - 7584863
Alignment:
Q  236 tttcatccagtaaaagagtgagtgttagagagagtgt 272  Q
    ||||||||| ||||||| |||||||||||||||||||    
T  7584899 tttcatccaataaaagaatgagtgttagagagagtgt 7584863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 229 - 277
Target Start/End: Original strand, 16875377 - 16875425
Alignment:
Q  229 acattgatttcatccagtaaaagagtgagtgttagagagagtgttagaa 277  Q
    |||||||||| | ||| ||| ||||||||||||||||| ||||||||||    
T  16875377 acattgattttacccaataagagagtgagtgttagagaaagtgttagaa 16875425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 214 - 270
Target Start/End: Original strand, 17568799 - 17568855
Alignment:
Q  214 aaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagt 270  Q
    |||||||||| ||||| ||||||||||  || |||||||||||||| ||| ||||||    
T  17568799 aaagtggtgggacataaattgatttcactcaataaaagagtgagtgctagggagagt 17568855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 174 - 249
Target Start/End: Original strand, 31885885 - 31885963
Alignment:
Q  174 tttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaa 249  Q
    ||||||||||||||| ||||||   |||||||||||||  || ||| |||||| |||| ||||| ||||||||| ||||    
T  31885885 tttaaatcattgtagatctacactttgaaaattgaacctccagaaaatggtgggacatccattgttttcatccaataaa 31885963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 220 - 268
Target Start/End: Original strand, 32050413 - 32050461
Alignment:
Q  220 gtggcacatacattgatttcatccagtaaaagagtgagtgttagagaga 268  Q
    |||| |||||||||||||||| ||| ||||| |||||||| ||||||||    
T  32050413 gtggaacatacattgatttcacccaataaaaaagtgagtgctagagaga 32050461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 66; Significance: 8e-29; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 127 - 259
Target Start/End: Complemental strand, 27985 - 27850
Alignment:
Q  127 caacactctcttttgaacaccctctctaatactcactttcttgttgatttaaatcattgtaggtctaca---tgaaaattgaaccaacacaaagtggtgg 223  Q
    |||||| ||||||||||||| |||| ||||||||||| |||| ||| ||||||||||||| ||||||||   || |||| ||||| ||||||||||||||    
T  27985 caacaccctcttttgaacactctctttaatactcactctcttattggtttaaatcattgtgggtctacactttggaaatagaacccacacaaagtggtgg 27886  T
Q  224 cacatacattgatttcatccagtaaaagagtgagtg 259  Q
     ||||||||||||| |||||| |||||| |||||||    
T  27885 gacatacattgattccatccaataaaagcgtgagtg 27850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 198 - 273
Target Start/End: Complemental strand, 9763 - 9688
Alignment:
Q  198 aaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    ||||||||||| ||||||| |||||| | |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  9763 aaaattgaacccacacaaaatggtgggatatacattgatttcatccaataaaaaagtgagtgttagagagagtgtt 9688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 198 - 273
Target Start/End: Complemental strand, 11309 - 11234
Alignment:
Q  198 aaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    ||||||||||| ||||||| |||||| | |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  11309 aaaattgaacccacacaaaatggtgggatatacattgatttcatccaataaaaaagtgagtgttagagagagtgtt 11234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 196 - 271
Target Start/End: Original strand, 26941 - 27016
Alignment:
Q  196 tgaaaattgaaccaacacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtg 271  Q
    ||||||||||||| |||||||||||||| ||||||||||||||  |||| ||| ||||||||||||| ||||||||    
T  26941 tgaaaattgaacccacacaaagtggtggaacatacattgatttattccaataagagagtgagtgttaaagagagtg 27016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 296916 - 296860
Alignment:
Q  217 gtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagagagtgtt 273  Q
    ||||||| ||||||| |  ||||||||| ||| ||||||||||||||||||||||||    
T  296916 gtggtgggacatacactagtttcatccaataagagagtgagtgttagagagagtgtt 296860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0838 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 210 - 268
Target Start/End: Complemental strand, 2309 - 2251
Alignment:
Q  210 acacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagaga 268  Q
    ||||||||| |||  ||||||||||||||||||   |||||||||||||| ||||||||    
T  2309 acacaaagtagtgtgacatacattgatttcatcttataaaagagtgagtgctagagaga 2251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0832 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 210 - 268
Target Start/End: Complemental strand, 2340 - 2282
Alignment:
Q  210 acacaaagtggtggcacatacattgatttcatccagtaaaagagtgagtgttagagaga 268  Q
    ||||||||| |||  ||||||||||||||||||   |||||||||||||| ||||||||    
T  2340 acacaaagtagtgtgacatacattgatttcatcttataaaagagtgagtgctagagaga 2282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University