View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11379_low_6 (Length: 623)

Name: NF11379_low_6
Description: NF11379
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11379_low_6
NF11379_low_6
[»] chr2 (45 HSPs)
chr2 (19-609)||(42117157-42117768)
chr2 (499-593)||(31264125-31264219)
chr2 (498-594)||(36196469-36196565)
chr2 (503-586)||(34336102-34336185)
chr2 (498-591)||(19080691-19080784)
chr2 (502-590)||(27893530-27893618)
chr2 (499-594)||(11871716-11871811)
chr2 (158-394)||(30397280-30397517)
chr2 (494-570)||(31263923-31263999)
chr2 (479-588)||(21813189-21813289)
chr2 (498-590)||(15506048-15506140)
chr2 (498-566)||(31263987-31264055)
chr2 (481-570)||(31264208-31264299)
chr2 (484-590)||(20535490-20535597)
chr2 (484-570)||(27893610-27893696)
chr2 (485-570)||(16781098-16781184)
chr2 (498-568)||(30907136-30907206)
chr2 (484-570)||(37543129-37543215)
chr2 (484-567)||(30907367-30907450)
chr2 (484-570)||(30907063-30907148)
chr2 (481-551)||(34336342-34336412)
chr2 (485-546)||(16780928-16780989)
chr2 (481-570)||(34336020-34336109)
chr2 (514-567)||(39376399-39376452)
chr2 (534-586)||(15506478-15506530)
chr2 (484-551)||(27893023-27893090)
chr2 (496-567)||(34429681-34429752)
chr2 (492-570)||(36196553-36196629)
chr2 (481-586)||(5117052-5117156)
chr2 (171-228)||(25538273-25538330)
chr2 (398-434)||(29191781-29191817)
chr2 (484-539)||(13315808-13315863)
chr2 (498-564)||(16781044-16781110)
chr2 (503-546)||(37543014-37543057)
chr2 (484-551)||(41265313-41265380)
chr2 (402-436)||(14994749-14994783)
chr2 (540-570)||(21813295-21813325)
chr2 (546-592)||(27893136-27893182)
chr2 (523-557)||(30907316-30907350)
chr2 (498-548)||(34429743-34429793)
chr2 (523-592)||(39301404-39301472)
chr2 (534-570)||(921167-921203)
chr2 (482-542)||(11871828-11871888)
chr2 (482-570)||(19080615-19080703)
chr2 (498-554)||(39301889-39301945)
[»] scaffold0074 (3 HSPs)
scaffold0074 (158-398)||(27597-27842)
scaffold0074 (174-395)||(29403-29629)
scaffold0074 (86-122)||(27497-27533)
[»] chr3 (39 HSPs)
chr3 (158-398)||(24671397-24671642)
chr3 (174-385)||(34489658-34489875)
chr3 (174-398)||(4578785-4579014)
chr3 (179-383)||(34470021-34470231)
chr3 (178-385)||(34523126-34523339)
chr3 (170-394)||(27630503-27630728)
chr3 (158-244)||(31205130-31205216)
chr3 (484-571)||(31247692-31247779)
chr3 (485-586)||(24707457-24707558)
chr3 (502-592)||(21376633-21376723)
chr3 (481-588)||(54456657-54456764)
chr3 (498-594)||(31247609-31247705)
chr3 (481-570)||(50530232-50530321)
chr3 (526-594)||(4276226-4276294)
chr3 (484-594)||(14629274-14629375)
chr3 (484-570)||(21377048-21377134)
chr3 (485-592)||(21410273-21410380)
chr3 (500-591)||(31247192-31247282)
chr3 (483-570)||(3087070-3087156)
chr3 (485-546)||(35555987-35556048)
chr3 (498-551)||(54456803-54456856)
chr3 (494-570)||(3088142-3088218)
chr3 (546-594)||(21376984-21377032)
chr3 (484-536)||(53782953-53783005)
chr3 (500-570)||(5505729-5505800)
chr3 (481-591)||(19153864-19153974)
chr3 (503-590)||(35555595-35555682)
chr3 (86-135)||(4579085-4579137)
chr3 (502-567)||(54456847-54456912)
chr3 (546-590)||(3088071-3088115)
chr3 (480-564)||(49559492-49559576)
chr3 (503-546)||(4276629-4276672)
chr3 (499-546)||(14964737-14964784)
chr3 (483-546)||(50530397-50530460)
chr3 (529-570)||(19664436-19664477)
chr3 (82-150)||(34469900-34469971)
chr3 (531-571)||(13712077-13712117)
chr3 (86-122)||(24671290-24671326)
chr3 (484-512)||(35545565-35545593)
[»] chr1 (47 HSPs)
chr1 (158-398)||(46190927-46191170)
chr1 (174-347)||(4129859-4130037)
chr1 (504-593)||(48352708-48352797)
chr1 (503-594)||(8902829-8902920)
chr1 (483-587)||(2965479-2965583)
chr1 (505-588)||(1765763-1765846)
chr1 (499-594)||(27351115-27351210)
chr1 (481-570)||(11897828-11897917)
chr1 (481-570)||(29419098-29419187)
chr1 (484-591)||(39302320-39302427)
chr1 (523-593)||(10686680-10686750)
chr1 (485-567)||(10686766-10686848)
chr1 (500-594)||(34254564-34254658)
chr1 (499-588)||(44963903-44963992)
chr1 (495-570)||(34254499-34254574)
chr1 (484-594)||(8903244-8903354)
chr1 (484-570)||(48352791-48352877)
chr1 (481-570)||(17898897-17898986)
chr1 (485-570)||(27351041-27351126)
chr1 (498-546)||(4772650-4772698)
chr1 (495-570)||(10685848-10685923)
chr1 (484-551)||(39302756-39302823)
chr1 (503-570)||(44964063-44964130)
chr1 (86-142)||(46191218-46191277)
chr1 (498-570)||(17898837-17898909)
chr1 (503-570)||(1765917-1765984)
chr1 (503-594)||(10685916-10685998)
chr1 (498-590)||(29419014-29419110)
chr1 (86-135)||(4130093-4130145)
chr1 (544-594)||(48352309-48352359)
chr1 (31-94)||(4130152-4130216)
chr1 (484-564)||(5522043-5522123)
chr1 (546-594)||(49650975-49651023)
chr1 (503-546)||(1765881-1765924)
chr1 (483-542)||(28055744-28055803)
chr1 (485-546)||(4772161-4772222)
chr1 (481-567)||(27351587-27351673)
chr1 (480-570)||(49650558-49650648)
chr1 (524-570)||(49651050-49651096)
chr1 (529-570)||(23767619-23767660)
chr1 (498-551)||(44964022-44964075)
chr1 (404-436)||(622841-622873)
chr1 (527-592)||(2965897-2965958)
chr1 (504-560)||(34254998-34255053)
chr1 (402-434)||(35938326-35938358)
chr1 (546-594)||(49650676-49650724)
chr1 (530-570)||(49973979-49974019)
[»] chr6 (51 HSPs)
chr6 (158-398)||(18967578-18967823)
chr6 (494-594)||(9901958-9902058)
chr6 (484-570)||(20575401-20575487)
chr6 (499-594)||(17180104-17180199)
chr6 (194-354)||(23014953-23015110)
chr6 (498-588)||(32417684-32417774)
chr6 (498-588)||(32423525-32423615)
chr6 (498-582)||(20575475-20575559)
chr6 (481-570)||(9902314-9902403)
chr6 (485-570)||(11527526-11527611)
chr6 (481-570)||(16168740-16168829)
chr6 (498-591)||(17179687-17179780)
chr6 (485-570)||(32417459-32417544)
chr6 (485-570)||(32423300-32423385)
chr6 (534-594)||(10862552-10862612)
chr6 (502-591)||(11528013-11528102)
chr6 (503-570)||(32417537-32417604)
chr6 (503-570)||(32423378-32423445)
chr6 (485-567)||(2839615-2839697)
chr6 (527-593)||(10962830-10962896)
chr6 (484-570)||(16168454-16168540)
chr6 (498-556)||(20575600-20575658)
chr6 (494-594)||(10407308-10407408)
chr6 (498-586)||(16168528-16168607)
chr6 (534-598)||(17131620-17131684)
chr6 (499-555)||(32417593-32417649)
chr6 (499-555)||(32423434-32423490)
chr6 (487-570)||(10862637-10862720)
chr6 (499-594)||(24139473-24139568)
chr6 (484-570)||(11528094-11528180)
chr6 (484-570)||(20575696-20575780)
chr6 (484-570)||(32417762-32417848)
chr6 (484-570)||(32423603-32423689)
chr6 (485-570)||(2840101-2840186)
chr6 (498-594)||(11527599-11527686)
chr6 (498-570)||(16168680-16168752)
chr6 (86-135)||(18967871-18967923)
chr6 (185-238)||(6174631-6174684)
chr6 (557-594)||(9946679-9946716)
chr6 (553-594)||(28630591-28630632)
chr6 (546-590)||(2840030-2840074)
chr6 (485-592)||(10407709-10407817)
chr6 (523-591)||(17132183-17132251)
chr6 (523-570)||(10963162-10963209)
chr6 (527-570)||(24139557-24139600)
chr6 (403-436)||(7477028-7477061)
chr6 (403-436)||(7477394-7477427)
chr6 (403-436)||(7477760-7477793)
chr6 (402-434)||(7271654-7271686)
chr6 (498-546)||(16168644-16168692)
chr6 (487-551)||(28630685-28630749)
[»] chr4 (55 HSPs)
chr4 (174-398)||(10426974-10427203)
chr4 (482-591)||(52567730-52567839)
chr4 (503-594)||(5387194-5387285)
chr4 (484-580)||(42116047-42116143)
chr4 (499-592)||(52181779-52181872)
chr4 (481-593)||(19632212-19632323)
chr4 (482-570)||(43098169-43098257)
chr4 (502-593)||(8408826-8408917)
chr4 (498-585)||(26329921-26330008)
chr4 (498-592)||(31229318-31229412)
chr4 (500-570)||(26329996-26330066)
chr4 (497-570)||(41735814-41735887)
chr4 (485-570)||(43098461-43098546)
chr4 (485-584)||(2508252-2508349)
chr4 (498-570)||(2788964-2789036)
chr4 (498-594)||(52568161-52568256)
chr4 (485-588)||(36890618-36890721)
chr4 (481-570)||(2788776-2788865)
chr4 (484-570)||(26330056-26330142)
chr4 (498-570)||(43098401-43098473)
chr4 (530-594)||(44915933-44915997)
chr4 (484-570)||(19631752-19631838)
chr4 (523-590)||(42115660-42115727)
chr4 (479-570)||(52865940-52866031)
chr4 (472-547)||(52866366-52866441)
chr4 (498-588)||(22025116-22025206)
chr4 (485-570)||(52183473-52183558)
chr4 (498-551)||(26329826-26329879)
chr4 (524-576)||(2508678-2508730)
chr4 (500-590)||(8408407-8408497)
chr4 (481-546)||(8408337-8408402)
chr4 (523-584)||(35023955-35024016)
chr4 (503-556)||(35046550-35046603)
chr4 (537-585)||(43098280-43098328)
chr4 (400-468)||(28947029-28947099)
chr4 (86-135)||(10427274-10427326)
chr4 (484-570)||(22025350-22025436)
chr4 (485-551)||(23085275-23085340)
chr4 (504-570)||(35046437-35046503)
chr4 (484-538)||(41735958-41736012)
chr4 (484-546)||(44916324-44916386)
chr4 (529-594)||(19681283-19681348)
chr4 (484-529)||(22025055-22025100)
chr4 (479-543)||(8408936-8409000)
chr4 (502-570)||(22025291-22025358)
chr4 (498-546)||(41735875-41735923)
chr4 (500-551)||(5387131-5387182)
chr4 (546-593)||(19631869-19631916)
chr4 (500-551)||(35046493-35046544)
chr4 (546-593)||(52866058-52866105)
chr4 (481-570)||(9319996-9320085)
chr4 (165-239)||(42022865-42022938)
chr4 (529-570)||(31617640-31617681)
chr4 (396-436)||(40422009-40422049)
chr4 (494-570)||(52568244-52568320)
[»] chr7 (100 HSPs)
chr7 (159-391)||(16184010-16184247)
chr7 (158-385)||(8140335-8140568)
chr7 (174-398)||(2323687-2323915)
chr7 (500-586)||(19925311-19925397)
chr7 (500-598)||(28256558-28256656)
chr7 (498-592)||(31175924-31176018)
chr7 (502-590)||(10619867-10619955)
chr7 (498-594)||(35214870-35214966)
chr7 (500-594)||(5559173-5559268)
chr7 (524-591)||(27995548-27995615)
chr7 (481-570)||(31893525-31893614)
chr7 (503-594)||(1349114-1349208)
chr7 (502-590)||(39959163-39959251)
chr7 (159-234)||(5102951-5103026)
chr7 (500-586)||(4187663-4187749)
chr7 (495-593)||(33235518-33235616)
chr7 (481-567)||(33879568-33879654)
chr7 (485-570)||(5805028-5805113)
chr7 (498-583)||(5805101-5805186)
chr7 (498-594)||(33235097-33235193)
chr7 (498-570)||(33879505-33879577)
chr7 (479-570)||(1441482-1441573)
chr7 (484-570)||(5559096-5559183)
chr7 (484-570)||(5559667-5559752)
chr7 (536-594)||(8039747-8039805)
chr7 (484-570)||(20366587-20366673)
chr7 (500-570)||(21412931-21413001)
chr7 (494-592)||(28104296-28104394)
chr7 (481-570)||(8039649-8039738)
chr7 (502-593)||(23679497-23679587)
chr7 (485-570)||(19925387-19925472)
chr7 (523-588)||(20101909-20101974)
chr7 (500-576)||(20366521-20366597)
chr7 (524-585)||(34951316-34951377)
chr7 (485-546)||(36566526-36566587)
chr7 (522-594)||(20183856-20183928)
chr7 (527-594)||(1286770-1286836)
chr7 (501-588)||(21413081-21413167)
chr7 (498-576)||(1286433-1286511)
chr7 (500-583)||(1346545-1346624)
chr7 (484-570)||(19925094-19925180)
chr7 (484-570)||(34951511-34951597)
chr7 (499-572)||(5805581-5805654)
chr7 (523-584)||(6220351-6220411)
chr7 (401-454)||(16698347-16698400)
chr7 (401-454)||(17672583-17672636)
chr7 (482-570)||(21433131-21433219)
chr7 (481-570)||(29591106-29591194)
chr7 (494-570)||(35214805-35214882)
chr7 (481-570)||(40904678-40904766)
chr7 (481-570)||(41020173-41020261)
chr7 (499-595)||(20366112-20366207)
chr7 (482-570)||(28256480-28256568)
chr7 (482-570)||(36566265-36566353)
chr7 (484-551)||(1440995-1441062)
chr7 (479-570)||(20366033-20366123)
chr7 (499-570)||(21433208-21433279)
chr7 (523-594)||(27995149-27995220)
chr7 (534-593)||(29590711-29590770)
chr7 (484-570)||(31893239-31893325)
chr7 (503-593)||(35215290-35215380)
chr7 (484-570)||(39959243-39959329)
chr7 (485-570)||(1286360-1286445)
chr7 (495-568)||(8040197-8040270)
chr7 (502-570)||(1349201-1349269)
chr7 (546-594)||(1441407-1441455)
chr7 (498-546)||(5559631-5559679)
chr7 (546-594)||(8040121-8040169)
chr7 (546-594)||(39958789-39958837)
chr7 (527-586)||(23150731-23150790)
chr7 (484-567)||(27995050-27995133)
chr7 (498-593)||(42990563-42990658)
chr7 (484-570)||(5805643-5805728)
chr7 (86-135)||(16183902-16183954)
chr7 (500-570)||(19925170-19925239)
chr7 (503-557)||(21433337-21433391)
chr7 (485-570)||(22876903-22876987)
chr7 (485-566)||(33235024-33235105)
chr7 (498-567)||(40904754-40904823)
chr7 (549-594)||(42990983-42991028)
chr7 (86-135)||(2323557-2323608)
chr7 (498-546)||(31893489-31893537)
chr7 (402-479)||(38453022-38453100)
chr7 (491-570)||(1346476-1346555)
chr7 (539-570)||(33879440-33879471)
chr7 (402-436)||(3756377-3756411)
chr7 (500-570)||(34951451-34951521)
chr7 (501-546)||(10620239-10620284)
chr7 (501-542)||(19925230-19925271)
chr7 (485-570)||(20101813-20101897)
chr7 (485-570)||(21412856-21412941)
chr7 (523-556)||(21413014-21413047)
chr7 (499-547)||(31893437-31893485)
chr7 (485-570)||(39958677-39958762)
chr7 (539-567)||(21413048-21413076)
chr7 (531-567)||(29591047-29591083)
chr7 (484-512)||(31176057-31176085)
chr7 (530-570)||(35600078-35600118)
chr7 (391-427)||(41909246-41909282)
chr7 (530-570)||(42888994-42889034)
[»] scaffold0374 (2 HSPs)
scaffold0374 (481-594)||(16159-16272)
scaffold0374 (481-590)||(16576-16684)
[»] chr5 (54 HSPs)
chr5 (498-595)||(36418364-36418461)
chr5 (481-593)||(32459413-32459525)
chr5 (485-570)||(6336133-6336218)
chr5 (479-570)||(18951287-18951378)
chr5 (485-591)||(18238306-18238412)
chr5 (481-570)||(20728514-20728603)
chr5 (500-593)||(20729010-20729103)
chr5 (499-594)||(18249022-18249117)
chr5 (485-594)||(35891226-35891335)
chr5 (499-594)||(5734946-5735040)
chr5 (502-593)||(18237919-18238010)
chr5 (498-593)||(20728591-20728686)
chr5 (484-594)||(26275973-26276074)
chr5 (485-592)||(32459822-32459929)
chr5 (502-588)||(6336298-6336384)
chr5 (485-570)||(26275494-26275579)
chr5 (481-546)||(31813955-31814020)
chr5 (484-570)||(1722489-1722575)
chr5 (500-594)||(1722940-1723034)
chr5 (527-589)||(13543179-13543241)
chr5 (484-570)||(14235557-14235643)
chr5 (500-570)||(18951368-18951438)
chr5 (481-570)||(18248944-18249033)
chr5 (524-592)||(13543569-13543637)
chr5 (531-594)||(5734558-5734621)
chr5 (479-570)||(13538453-13538544)
chr5 (479-570)||(13543068-13543159)
chr5 (527-594)||(30737832-30737899)
chr5 (523-570)||(32660287-32660334)
chr5 (495-570)||(36418449-36418524)
chr5 (498-593)||(30738223-30738320)
chr5 (480-570)||(38405584-38405674)
chr5 (498-551)||(6336206-6336259)
chr5 (481-570)||(35189900-35189988)
chr5 (485-570)||(35190461-35190546)
chr5 (479-570)||(5735029-5735120)
chr5 (483-570)||(19278693-19278779)
chr5 (483-566)||(36417874-36417957)
chr5 (502-576)||(1722567-1722641)
chr5 (546-588)||(38405518-38405560)
chr5 (537-594)||(19279187-19279244)
chr5 (498-551)||(32660322-32660375)
chr5 (498-547)||(35189976-35190025)
chr5 (522-570)||(9919230-9919278)
chr5 (546-594)||(13538575-13538623)
chr5 (530-570)||(35342325-35342365)
chr5 (502-593)||(19278771-19278862)
chr5 (491-570)||(32660195-32660274)
chr5 (402-436)||(9828182-9828216)
chr5 (484-570)||(13543651-13543737)
chr5 (546-592)||(36417988-36418034)
chr5 (522-570)||(9919750-9919798)
chr5 (402-434)||(35446954-35446986)
chr5 (549-585)||(38082661-38082697)
[»] chr8 (71 HSPs)
chr8 (498-594)||(30576634-30576730)
chr8 (481-591)||(34686875-34686985)
chr8 (485-594)||(5358632-5358741)
chr8 (500-593)||(9276960-9277052)
chr8 (484-592)||(13771843-13771951)
chr8 (503-586)||(9770768-9770851)
chr8 (498-588)||(29794238-29794328)
chr8 (484-593)||(35433885-35433994)
chr8 (499-594)||(39700948-39701043)
chr8 (484-570)||(25737092-25737178)
chr8 (499-585)||(30576215-30576301)
chr8 (481-586)||(13771403-13771508)
chr8 (498-594)||(23553417-23553513)
chr8 (485-570)||(36359890-36359975)
chr8 (503-588)||(36359968-36360053)
chr8 (481-590)||(44040809-44040916)
chr8 (485-570)||(45017977-45018062)
chr8 (481-585)||(35434313-35434417)
chr8 (484-570)||(39701451-39701537)
chr8 (499-587)||(4613803-4613891)
chr8 (499-591)||(16197092-16197184)
chr8 (498-594)||(25730097-25730193)
chr8 (484-570)||(9770844-9770930)
chr8 (479-570)||(36314705-36314796)
chr8 (484-567)||(36360136-36360219)
chr8 (499-594)||(39701367-39701462)
chr8 (479-570)||(45017730-45017821)
chr8 (485-551)||(8713835-8713901)
chr8 (502-592)||(8714330-8714420)
chr8 (506-592)||(9276553-9276639)
chr8 (484-570)||(29794316-29794402)
chr8 (499-593)||(44041263-44041357)
chr8 (523-584)||(16208674-16208735)
chr8 (485-570)||(30576718-30576803)
chr8 (498-594)||(25737583-25737679)
chr8 (495-570)||(8714412-8714487)
chr8 (479-570)||(16197012-16197103)
chr8 (503-593)||(31169460-31169550)
chr8 (484-545)||(23179036-23179096)
chr8 (481-570)||(29030176-29030265)
chr8 (502-593)||(8713912-8714003)
chr8 (498-546)||(11113613-11113661)
chr8 (498-570)||(40553297-40553369)
chr8 (522-570)||(43422944-43422992)
chr8 (484-570)||(14871406-14871493)
chr8 (500-591)||(25737168-25737259)
chr8 (481-567)||(6236290-6236376)
chr8 (484-570)||(29792576-29792662)
chr8 (484-570)||(30576140-30576226)
chr8 (481-570)||(23553340-23553429)
chr8 (503-588)||(45017814-45017899)
chr8 (494-570)||(44041346-44041422)
chr8 (503-570)||(9277042-9277109)
chr8 (487-570)||(9770552-9770635)
chr8 (479-570)||(11113534-11113625)
chr8 (481-556)||(25730196-25730271)
chr8 (485-570)||(4613729-4613814)
chr8 (498-547)||(9770674-9770723)
chr8 (482-570)||(31169543-31169630)
chr8 (498-570)||(39700887-39700959)
chr8 (524-592)||(6235818-6235886)
chr8 (494-570)||(40553357-40553433)
chr8 (546-593)||(14871331-14871378)
chr8 (481-556)||(25737682-25737757)
chr8 (534-585)||(34686509-34686560)
chr8 (531-570)||(43423091-43423130)
chr8 (485-567)||(43422847-43422929)
chr8 (481-551)||(43423169-43423239)
chr8 (498-547)||(45017942-45017989)
chr8 (522-551)||(36360092-36360121)
chr8 (498-546)||(43422980-43423028)
[»] scaffold0019 (3 HSPs)
scaffold0019 (481-570)||(124129-124218)
scaffold0019 (484-570)||(124406-124492)
scaffold0019 (498-570)||(124346-124418)
[»] scaffold0746 (4 HSPs)
scaffold0746 (498-594)||(500-596)
scaffold0746 (485-570)||(11-96)
scaffold0746 (481-567)||(587-673)
scaffold0746 (500-591)||(86-176)
[»] scaffold0070 (2 HSPs)
scaffold0070 (498-594)||(28607-28703)
scaffold0070 (481-567)||(28530-28616)
[»] scaffold0041 (2 HSPs)
scaffold0041 (481-570)||(45252-45340)
scaffold0041 (498-567)||(45195-45264)
[»] scaffold0027 (3 HSPs)
scaffold0027 (484-570)||(9922-10008)
scaffold0027 (481-570)||(9380-9469)
scaffold0027 (546-594)||(9496-9544)


Alignment Details
Target: chr2 (Bit Score: 496; Significance: 0; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 496; E-Value: 0
Query Start/End: Original strand, 19 - 609
Target Start/End: Complemental strand, 42117768 - 42117157
Alignment:
Q  19 aaatacgagaaaagacaatttactctctctatggaaataggagaatactaacctaggagaaactatatttcatctcactctcaacaagctctaattcttg 118  Q
    ||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42117768 aaatatgagaaaagacaaattactctctctatggaaataggagtatactaacctaggagaaactatatttcatctcactctcaacaagctctaattcttg 42117669  T
Q  119 ttgtgttactacttgattgcatgattgaaattat---------------------atgtcaggtaagccattgtttcttacatgcaacaagccacttgtc 197  Q
    ||||||||||||||||||||||||||||||||||                     |||| ||||||||||||||||||||||||||||||||||||||||    
T  42117668 ttgtgttactacttgattgcatgattgaaattatgcaaataaacttgctatttatatgtgaggtaagccattgtttcttacatgcaacaagccacttgtc 42117569  T
Q  198 ttccatgcaaaacaccaagtgtgcaacatgtcacttgcatctaatgcaacttatcaatgcatgcaactatccactttgccaccttgcattacattgagaa 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42117568 ttccatgcaaaacaccaagtgtgcaacatgtcacttgcatctaatgcaacttatcaatgcatgcaactatccactttgccaccttgcattacattgagaa 42117469  T
Q  298 atgcaatttgtcttacctgcatcatggacatgtgccttgttacaaaagtggctttaccaaacataatattgagtttggatcatcatttaggccaattcca 397  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  42117468 atgcaatttgtcttacctgcaccatggacatgtgtcttgttacaaaagtggctttaccaaacataatattgggtttggatcatcatttagggcaattcca 42117369  T
Q  398 tgaaaattgctcttctcccatttggttttgctcattccccttttacttttgtgcctatgagctaactcacgctgaaaaatgttggtcaaataccactttt 497  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  42117368 tgaaaattgctcttctcccttttggttttgctcattccccttttacttttgtgcctatgagctaactcacgcttaaaaatgttggtcaaataccattttt 42117269  T
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccccctg 597  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42117268 ggtccttttagtttgtcagaaattctaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccccctg 42117169  T
Q  598 tgccatgttgtt 609  Q
    ||||||||||||    
T  42117168 tgccatgttgtt 42117157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 499 - 593
Target Start/End: Complemental strand, 31264219 - 31264125
Alignment:
Q  499 gtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccc 593  Q
    |||||||||||||| ||||| ||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||    
T  31264219 gtccttttagtttgacagaatttccaagttagttatttaagtttcaaaagtttcaaataggtccttttagttgataaactatttcaccgtcaccc 31264125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 498 - 594
Target Start/End: Complemental strand, 36196565 - 36196469
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 594  Q
    |||| |||||||||| ||||| ||||||||||||| ||| |||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||    
T  36196565 ggtctttttagtttgacagaatttccaagttagtcatttgagtttcaaaagtttcaaataggtcattttagttgataaactatttcaccgttacccc 36196469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 503 - 586
Target Start/End: Original strand, 34336102 - 34336185
Alignment:
Q  503 ttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcacc 586  Q
    |||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||    
T  34336102 ttttagtttgacagaattcccaagttagtcctttaagtttcaaaagttttaaataggtctttttagttaataaactatttcacc 34336185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 498 - 591
Target Start/End: Original strand, 19080691 - 19080784
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttac 591  Q
    |||| |||||||||| ||||| || |||||||| | |||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||    
T  19080691 ggtcattttagtttgacagaattttcaagttagacatttaagtttcaaaagtttcatataggtccttttagttgataaactatttcaccgttac 19080784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 502 - 590
Target Start/End: Complemental strand, 27893618 - 27893530
Alignment:
Q  502 cttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgtta 590  Q
    ||||||||||| ||||| | |||||||||||||||||||||||||||||| |||||| || ||||||||||||||| |||||| |||||    
T  27893618 cttttagtttgacagaattcccaagttagtcctttaagtttcaaaagtttcaaatagatcattttagttgataaactatttcatcgtta 27893530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 499 - 594
Target Start/End: Complemental strand, 11871811 - 11871716
Alignment:
Q  499 gtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 594  Q
    ||||| |||||||| ||||| |  | ||||||||||||||||||||||||||||||||| ||| ||||||||||||||  |||| |||||||||||    
T  11871811 gtcctcttagtttgacagaattctcgagttagtcctttaagtttcaaaagttttaaatatgtcattttagttgataaattatttaaccgttacccc 11871716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 158 - 394
Target Start/End: Original strand, 30397280 - 30397517
Alignment:
Q  158 aggtaagccattgtttcttacatgcaacaagccacttgtcttccatgcaaaacaccaagtgtgcaacatgtcacttgcatctaatgca-------actta 250  Q
    ||||||||||| ||| |||||||||||||| | |||||||||||||| ||||       ||||||||||||||||| ||||| |||||       ||||     
T  30397280 aggtaagccatagttccttacatgcaacaaactacttgtcttccatgtaaaatt-----tgtgcaacatgtcacttacatctcatgcatcttgcaacttg 30397374  T
Q  251 tcaatgcatgcaactatccactttgccaccttgcattacattgagaaatgcaatttgtcttacctgcatcatggacatgtgccttgttacaaaagtggct 350  Q
    |||||  ||| ||| || || ||||||||  |||||||||| | ||||||||| || |||||| |||| |||| ||||||  |||| ||||||||||| |    
T  30397375 tcaatatatgtaaccattcattttgccactatgcattacat-gcgaaatgcaacttatcttacatgcaccatgaacatgtatcttgctacaaaagtggtt 30397473  T
Q  351 ttaccaaacataatattgagtttggatcatcatttaggccaatt 394  Q
    ||| ||| || |||||||  |||||||||| |||| ||||||||    
T  30397474 ttagcaatcacaatattggatttggatcataatttgggccaatt 30397517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 494 - 570
Target Start/End: Original strand, 31263923 - 31263999
Alignment:
Q  494 ttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||| |||||||||| ||||| |||||||||| ||||||||||||| ||||||| || |||||||||||||||    
T  31263923 ttttggtctttttagtttgacagaatttccaagttaatcctttaagtttcgaaagtttcaattaggtccttttagtt 31263999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 479 - 588
Target Start/End: Original strand, 21813189 - 21813289
Alignment:
Q  479 ttggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaaca 578  Q
    |||| |||||||||||||| ||||||||||||||  |||| |  |||||||||||||||||||||||||         |||||||||||||||||||||     
T  21813189 ttggccaaataccacttttagtccttttagtttgatagaattctcaagttagtcctttaagtttcaaaa---------aggtccttttagttgataaact 21813279  T
Q  579 atttcaccgt 588  Q
    ||||||||||    
T  21813280 atttcaccgt 21813289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 498 - 590
Target Start/End: Original strand, 15506048 - 15506140
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgtta 590  Q
    ||||||||||||||| || || |  ||| ||| |||||||||||| |||||||||||| ||||| ||||| ||||||||| ||||||||||||    
T  15506048 ggtccttttagtttgacataattctcaaattaatcctttaagtttaaaaagttttaaagaggtcattttaattgataaactatttcaccgtta 15506140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 498 - 566
Target Start/End: Original strand, 31263987 - 31264055
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtcctttt 566  Q
    ||||||||||||||| ||||| |  ||||||||||||||||||||||||||||| |||||||| |||||    
T  31263987 ggtccttttagtttgacagaattctcaagttagtcctttaagtttcaaaagtttcaaataggttctttt 31264055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 481 - 570
Target Start/End: Complemental strand, 31264299 - 31264208
Alignment:
Q  481 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagt--tagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||| |||||||| ||||||||||||| ||||| ||||||||  |||| ||||||||||| ||||||| || || ||||||||||||    
T  31264299 ggtcaaatatcacttttgatccttttagtttgacagaatttccaagttatagtactttaagtttcgaaagtttcaattaagtccttttagtt 31264208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 484 - 590
Target Start/End: Original strand, 20535490 - 20535597
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaa-gtttcaaaagttttaaataggtccttttagttgataaacaattt 582  Q
    |||||||||| || | ||||||||||||  || || |  |||||||||| ||||| |||||||| |||| ||||||||| ||||||||||||||| ||||    
T  20535490 caaataccacgttagatccttttagtttaacataattatcaagttagtcatttaaagtttcaaatgtttcaaataggtcattttagttgataaactattt 20535589  T
Q  583 caccgtta 590  Q
    ||||||||    
T  20535590 caccgtta 20535597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 484 - 570
Target Start/End: Complemental strand, 27893696 - 27893610
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattc-caagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||| |||||||||||||||||||||| || |||||| |||||||||||||||||||||  |||||| || ||||| |||||||||    
T  27893696 caaatatcacttttggtccttttagtttgaca-aaattctcaagttagtcctttaagtttcgtaagtttcaattaggttcttttagtt 27893610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 485 - 570
Target Start/End: Complemental strand, 16781184 - 16781098
Alignment:
Q  485 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcc-tttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||| ||||||||||| |||||||||| ||||| |  ||||||||||| |||||||||  |||||||||| |||||||||||||||    
T  16781184 aaatatcacttttggtcattttagtttgacagaattctcaagttagtccttttaagttttgaaagttttaattaggtccttttagtt 16781098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 498 - 568
Target Start/End: Original strand, 30907136 - 30907206
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttag 568  Q
    ||||||||||||||| || || |  ||||||||||||||||||||||||||||| |||||| |||||||||    
T  30907136 ggtccttttagtttgacataattctcaagttagtcctttaagtttcaaaagtttcaaatagatccttttag 30907206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 484 - 570
Target Start/End: Complemental strand, 37543215 - 37543129
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||| ||||||| ||||||||||| ||||| || |||||||||| |||||||||  ||||||| || || ||||||||||||    
T  37543215 caaataccatttttggttcttttagtttgacagaattttcaagttagtcttttaagttttgaaagtttcaattaagtccttttagtt 37543129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 484 - 567
Target Start/End: Complemental strand, 30907450 - 30907367
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtcctttta 567  Q
    ||||||||||||||  ||||||||||||| || || ||  ||||||||| |||||||||| ||||||| || ||||||||||||    
T  30907450 caaataccacttttaatccttttagtttgacaaaatttataagttagtcatttaagtttcgaaagtttcaattaggtcctttta 30907367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 484 - 570
Target Start/End: Original strand, 30907063 - 30907148
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||| || |||||||| |||||||||| ||||| |  |||||||||| |||||||||| ||||||| || |||||||||||||||    
T  30907063 caaatatcatttttggtc-ttttagtttgacagaattctcaagttagtcttttaagtttcgaaagtttcaattaggtccttttagtt 30907148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 481 - 551
Target Start/End: Complemental strand, 34336412 - 34336342
Alignment:
Q  481 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttt 551  Q
    ||||||||| |||||||||||||||||||||| ||||| |  ||| |||||||||||| |||| |||||||    
T  34336412 ggtcaaatatcacttttggtccttttagtttgacagaattctcaaattagtcctttaaatttcgaaagttt 34336342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 485 - 546
Target Start/End: Original strand, 16780928 - 16780989
Alignment:
Q  485 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaa 546  Q
    |||||||||||||| |||||||| || | ||||| || ||||||||||||||||||||||||    
T  16780928 aaataccacttttgatccttttaattcgacagaattttcaagttagtcctttaagtttcaaa 16780989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 481 - 570
Target Start/End: Original strand, 34336020 - 34336109
Alignment:
Q  481 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||||||||||||| |||||||||||||  | || || ||| ||||||||||||||||  ||||||| || || ||| ||||||||    
T  34336020 ggtcaaataccacttttgatccttttagtttgataaaattttcaaattagtcctttaagttttgaaagtttcaattatgtcattttagtt 34336109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 514 - 567
Target Start/End: Complemental strand, 39376452 - 39376399
Alignment:
Q  514 cagaaattccaagttagtcctttaagtttcaaaagttttaaataggtcctttta 567  Q
    ||||| ||||||||||||||||||||||||||| |||| ||||||||| |||||    
T  39376452 cagaatttccaagttagtcctttaagtttcaaacgtttcaaataggtcttttta 39376399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 534 - 586
Target Start/End: Complemental strand, 15506530 - 15506478
Alignment:
Q  534 tttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcacc 586  Q
    ||||| ||| |||||||||||||| ||||||||||||||||||| ||||||||    
T  15506530 tttaaattttaaaagttttaaatatgtccttttagttgataaactatttcacc 15506478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 484 - 551
Target Start/End: Original strand, 27893023 - 27893090
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttt 551  Q
    |||||||||| |||||||||||||||||| ||||| |  ||||||| |||||||| |||| |||||||    
T  27893023 caaataccacgtttggtccttttagtttgacagaattctcaagttaatcctttaaatttcgaaagttt 27893090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 496 - 567
Target Start/End: Original strand, 34429681 - 34429752
Alignment:
Q  496 ttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtcctttta 567  Q
    ||||||||||||||||| ||||| |  |||||||||||||||| |||| ||| ||| || ||||||||||||    
T  34429681 ttggtccttttagtttgacagaattctcaagttagtcctttaaatttcgaaaatttcaattaggtcctttta 34429752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 492 - 570
Target Start/End: Complemental strand, 36196629 - 36196553
Alignment:
Q  492 acttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||||||||||||||| ||  | || ||| ||||||||||||||||| ||||||| || |||||| ||||||||    
T  36196629 acttttggtccttttagtttgaca--attttcaaattagtcctttaagtttcgaaagtttcaattaggtctttttagtt 36196553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 481 - 586
Target Start/End: Complemental strand, 5117156 - 5117052
Alignment:
Q  481 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaat 580  Q
    |||||||||||| |||| ||| |||||||||  ||||| |   ||||||||  ||||||| || ||||||||||||| ||| ||||||||||||||  ||    
T  5117156 ggtcaaataccattttttgtctttttagtttcacagaattcataagttagtg-tttaagtatcgaaagttttaaatatgtctttttagttgataaattat 5117058  T
Q  581 ttcacc 586  Q
    ||||||    
T  5117057 ttcacc 5117052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 25538330 - 25538273
Alignment:
Q  171 tttcttacatgcaacaagccacttgtcttccatgcaaaacaccaagtgtgcaacatgt 228  Q
    |||||||||||||||||| || || ||||||||| || | ||||||||||||||||||    
T  25538330 tttcttacatgcaacaagtcatttatcttccatgtaatataccaagtgtgcaacatgt 25538273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 398 - 434
Target Start/End: Original strand, 29191781 - 29191817
Alignment:
Q  398 tgaaaattgctcttctcccatttggttttgctcattc 434  Q
    |||||||||||||||||||||||| ||||||||||||    
T  29191781 tgaaaattgctcttctcccatttgtttttgctcattc 29191817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 484 - 539
Target Start/End: Complemental strand, 13315863 - 13315808
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaag 539  Q
    |||| |||| ||||| ||||||||||||| || || ||||||||||||||||||||    
T  13315863 caaagaccatttttgatccttttagtttgacataatttccaagttagtcctttaag 13315808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 498 - 564
Target Start/End: Complemental strand, 16781110 - 16781044
Alignment:
Q  498 ggtccttttagtttgtcagaaattc-caagttagtcctttaagtttcaaaagttttaaataggtcctt 564  Q
    ||||||||||||||| || |||||| |||||||||||||||| |||||||||||| || |||| ||||    
T  16781110 ggtccttttagtttgaca-aaattcacaagttagtcctttaaatttcaaaagtttcaattaggccctt 16781044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 503 - 546
Target Start/End: Original strand, 37543014 - 37543057
Alignment:
Q  503 ttttagtttgtcagaaattccaagttagtcctttaagtttcaaa 546  Q
    |||||||||| || || |||||||||||||||||||||||||||    
T  37543014 ttttagtttgacataatttccaagttagtcctttaagtttcaaa 37543057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 484 - 551
Target Start/End: Complemental strand, 41265380 - 41265313
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttt 551  Q
    ||||||| ||||||| |||||||||||||  |||| |  |||||||||| |||||||||| |||||||    
T  41265380 caaatacaacttttgatccttttagtttgagagaattatcaagttagtcatttaagtttcgaaagttt 41265313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 402 - 436
Target Start/End: Original strand, 14994749 - 14994783
Alignment:
Q  402 aattgctcttctcccatttggttttgctcattccc 436  Q
    |||||||||||||||||||| ||||||||||||||    
T  14994749 aattgctcttctcccatttgtttttgctcattccc 14994783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 540 - 570
Target Start/End: Original strand, 21813295 - 21813325
Alignment:
Q  540 tttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||||||||||||||||||||||||||    
T  21813295 tttcaaaagttttaaataggtccttttagtt 21813325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 546 - 592
Target Start/End: Original strand, 27893136 - 27893182
Alignment:
Q  546 aagttttaaataggtccttttagttgataaacaatttcaccgttacc 592  Q
    |||||| ||||||||| ||||||||||||||| |||||| |||||||    
T  27893136 aagtttcaaataggtctttttagttgataaactatttcaacgttacc 27893182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 523 - 557
Target Start/End: Complemental strand, 30907350 - 30907316
Alignment:
Q  523 caagttagtcctttaagtttcaaaagttttaaata 557  Q
    ||||||||||||||||||||||||||||| |||||    
T  30907350 caagttagtcctttaagtttcaaaagtttcaaata 30907316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 498 - 548
Target Start/End: Original strand, 34429743 - 34429793
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaag 548  Q
    |||||||||| ||||  |||| |||||||||| ||||||||||||||||||    
T  34429743 ggtccttttaatttgaaagaatttccaagttaatcctttaagtttcaaaag 34429793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 523 - 592
Target Start/End: Original strand, 39301404 - 39301472
Alignment:
Q  523 caagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacc 592  Q
    |||||||||||||||| ||||| || |||||||||||| ||| || ||| ||||| |||||||| |||||    
T  39301404 caagttagtcctttaa-tttcataaattttaaataggttcttgtaattgttaaactatttcaccattacc 39301472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 534 - 570
Target Start/End: Complemental strand, 921203 - 921167
Alignment:
Q  534 tttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  921203 tttaagtttcaaaagtcttaaataagtccttttagtt 921167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 482 - 542
Target Start/End: Complemental strand, 11871888 - 11871828
Alignment:
Q  482 gtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagttt 542  Q
    ||||||||| |  |||||||||||||||||| ||||| |||||||  ||||| ||||||||    
T  11871888 gtcaaatactatgtttggtccttttagtttgacagaatttccaagccagtccgttaagttt 11871828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 482 - 570
Target Start/End: Original strand, 19080615 - 19080703
Alignment:
Q  482 gtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||||| |||||||| |||||||| | ||||| | |  | ||| ||||||||||||  ||||||| || |||||| ||||||||    
T  19080615 gtcaaataccatttttggtcattttagttcgacagaattccttaattaatcctttaagttttgaaagtttcaattaggtcattttagtt 19080703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 498 - 554
Target Start/End: Complemental strand, 39301945 - 39301889
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaa 554  Q
    |||||||||||||||  |||| ||  ||||||||||||||| ||| |||||||||||    
T  39301945 ggtccttttagtttgatagaatttttaagttagtcctttaaattttaaaagttttaa 39301889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 110; Significance: 4e-55; HSPs: 3)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 158 - 398
Target Start/End: Original strand, 27597 - 27842
Alignment:
Q  158 aggtaagccattgtttcttacatgcaacaagccacttgtcttccatgcaaaacaccaagtgtgcaacatgtcacttgcatctaatgcaactta------- 250  Q
    ||||||||| | ||| ||||||||||||||||||||||||||||||||||| | ||||| ||||||| |||||||||||||| ||||| |||            
T  27597 aggtaagccttagttccttacatgcaacaagccacttgtcttccatgcaaa-ctccaagagtgcaacttgtcacttgcatctcatgcatcttgcaacatg 27695  T
Q  251 tcaatgcatgcaactatccactttgccaccttgcattacattgagaaatgcaatttgtcttacctgcatcatggacatgtgccttgttacaaaagtggct 350  Q
    |||||||||||||  ||||||||||||||| |||||||||| ||||| ||||| ||||||| | |||| |||||||||||| |||| |||||||||||||    
T  27696 tcaatgcatgcaagcatccactttgccaccatgcattacat-gagaagtgcaacttgtctttcatgcaccatggacatgtgtcttgctacaaaagtggct 27794  T
Q  351 ttaccaaacataatattgagtttggatcatcatttaggccaattccat 398  Q
    ||||||| || ||||||| | |||||||||||||| ||||||||||||    
T  27795 ttaccaatcacaatattgggcttggatcatcatttgggccaattccat 27842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #2
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 174 - 395
Target Start/End: Original strand, 29403 - 29629
Alignment:
Q  174 cttacatgcaacaagccacttgtcttccatgcaaaacaccaagtgtgcaacatgtcacttgcatctaatgcaactta-------tcaatgcatgcaacta 266  Q
    ||||||||||||||||||||||||||||||||||| | ||||| ||||||| |||||||||||||| ||||| |||        | |||| ||||||  |    
T  29403 cttacatgcaacaagccacttgtcttccatgcaaa-ctccaagagtgcaacttgtcacttgcatctcatgcatcttgaaacatgtaaatgaatgcaaaca 29501  T
Q  267 tccactttgccaccttgcattacattgagaaatgcaatttgtcttacctgcatcatggacatgtgccttgttacaaaagtggctttaccaaacataatat 366  Q
    | ||| |||||||| ||||||||||  |||||||||| ||||||||| |||| ||| |||||||| |||| |||||||||||||||||||| |  |||||    
T  29502 tacacattgccaccatgcattacata-agaaatgcaacttgtcttacatgcaccatagacatgtgtcttgctacaaaagtggctttaccaatcgcaatat 29600  T
Q  367 tgagtttggatcatcatttaggccaattc 395  Q
    || | |||||||||||||| |||||||||    
T  29601 tgggcttggatcatcatttgggccaattc 29629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 86 - 122
Target Start/End: Original strand, 27497 - 27533
Alignment:
Q  86 tttcatctcactctcaacaagctctaattcttgttgt 122  Q
    |||| ||||||||||||||||||||||||||||||||    
T  27497 tttcctctcactctcaacaagctctaattcttgttgt 27533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 110; Significance: 4e-55; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 158 - 398
Target Start/End: Original strand, 24671397 - 24671642
Alignment:
Q  158 aggtaagccattgtttcttacatgcaacaagccacttgtcttccatgcaaaacaccaagtgtgcaacatgtcacttgcatctaatgcaactta------- 250  Q
    ||||||||| | ||| ||||||||||||||||||||||||||||||||||| |  |||| ||||||| |||||||||||||| ||||| |||            
T  24671397 aggtaagccttagttccttacatgcaacaagccacttgtcttccatgcaaa-cttcaagagtgcaacttgtcacttgcatctcatgcatcttgcaacatg 24671495  T
Q  251 tcaatgcatgcaactatccactttgccaccttgcattacattgagaaatgcaatttgtcttacctgcatcatggacatgtgccttgttacaaaagtggct 350  Q
    |||||||||||||| ||||||||||||||| |||||||||| ||||| ||||| ||||||| | |||| |||||||||||| |||| |||||||||||||    
T  24671496 tcaatgcatgcaaccatccactttgccaccatgcattacat-gagaagtgcaacttgtctttcatgcaccatggacatgtgtcttgctacaaaagtggct 24671594  T
Q  351 ttaccaaacataatattgagtttggatcatcatttaggccaattccat 398  Q
    ||||||| || ||||||| | |||||||||||||| ||||||||||||    
T  24671595 ttaccaatcacaatattgggcttggatcatcatttgggccaattccat 24671642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 174 - 385
Target Start/End: Original strand, 34489658 - 34489875
Alignment:
Q  174 cttacatgcaacaagccacttgtcttccatgcaaaacaccaagtgtgcaacatgtcacttgcatctaatg-------caacttatcaatgcatgcaacta 266  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||| |||       |||||| |||||||||||||||     
T  34489658 cttacatgcaacaagccacttgtcttccatgcaaaaaaccaagtgtacaacatgtcacttgtatctcatgtatcttgcaacttgtcaatgcatgcaactg 34489757  T
Q  267 tccactttgccaccttgcattacattgagaaatgcaatttgtcttacctgcatcatggacatgtgccttgttacaaaagtggctttaccaaacataatat 366  Q
    ||||||||||||| || | |||||| || |||||||| ||||||||| |||| |||||||| ||| |||||||||||||||||||||| |   | |||||    
T  34489758 tccactttgccacttttccttacat-gaaaaatgcaacttgtcttacatgcaccatggacacgtgtcttgttacaaaagtggctttacgagttacaatat 34489856  T
Q  367 tgagtttggatcatcattt 385  Q
    || | ||||||||||||||    
T  34489857 tgggattggatcatcattt 34489875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 174 - 398
Target Start/End: Complemental strand, 4579014 - 4578785
Alignment:
Q  174 cttacatgcaacaagccacttgtcttccatgcaaaacaccaagtgtgcaacatgtcacttgcatctaatgcaacttat-------caatgcatgcaacta 266  Q
    |||| |||||||||||||||||||||||||||||| |  |||| ||| ||| |||||||||||||| ||||| ||| |       ||||||||||||| |    
T  4579014 cttagatgcaacaagccacttgtcttccatgcaaa-cttcaagagtgaaacttgtcacttgcatctcatgcatcttgtaacatgtcaatgcatgcaacca 4578916  T
Q  267 tccactttgccaccttgcattacattgagaaatgcaatttgtcttacctgcatcatggacatgtgccttgttacaaaagtggctttaccaaacataatat 366  Q
    |||||||||||||| |||||||||| ||||| ||||| ||||||| | |||| ||| |||||||| |||| |||||||||||||||||||| || |||||    
T  4578915 tccactttgccaccatgcattacat-gagaagtgcaacttgtctttcatgcaccatcgacatgtgtcttgctacaaaagtggctttaccaatcacaatat 4578817  T
Q  367 tgagtttggatcatcatttaggccaattccat 398  Q
    || | |||||||||||||| |||||| |||||    
T  4578816 tgggcttggatcatcatttgggccaactccat 4578785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 179 - 383
Target Start/End: Original strand, 34470021 - 34470231
Alignment:
Q  179 atgcaacaagccacttgtcttccatgcaaaacaccaagtgtgcaacatgtcacttgcatctaatgca-------acttatcaatgcatgcaactatccac 271  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| | |||| |||||       |||| |||||||| |||||| |||||    
T  34470021 atgcaacaagccacttgtcttctatgcaaaacaccaagtgtgcaacatgtcactggtatctcatgcatcttgcaacttgtcaatgcacgcaactgtccac 34470120  T
Q  272 tttgccaccttgcattacattgagaaatgcaatttgtcttacctgcatcatggacatgtgccttgttacaaaagtggctttaccaaacataatattgagt 371  Q
    |||||||| |||| || ||| || |||||| | |||| |||| |||| |||| ||||||| |  |||||||||||||| ||||||| |||||||||| ||    
T  34470121 tttgccactttgctttgcat-gaaaaatgctacttgtgttacatgcaccatgtacatgtgtcaagttacaaaagtggccttaccaatcataatattgggt 34470219  T
Q  372 ttggatcatcat 383  Q
    || |||||||||    
T  34470220 tttgatcatcat 34470231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 178 - 385
Target Start/End: Original strand, 34523126 - 34523339
Alignment:
Q  178 catgcaacaagccacttgtcttccatgcaaaacaccaagtgtgcaacatgtcacttgcatctaatgca-------acttatcaatgcatgcaactatcca 270  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||| |||  |||||       |||| ||||||||||||||| ||||    
T  34523126 catgcaataagccacttgtcttccatgcaaaacaccaagtgtacaacatgtcatttgtatcgcatgcatcttgcaacttgtcaatgcatgcaactgtcca 34523225  T
Q  271 ctttgccaccttgcattacattgagaaatgcaatttgtcttacctgcatcatggacatgtgccttgttacaaaagtggctttaccaaacataatattgag 370  Q
    ||||||||| |||| ||||| ||| |||||||| ||||||||| |||| | |||||| ||| | ||||||||||||||||||||||   | |||||||||    
T  34523226 ctttgccactttgccttaca-tgaaaaatgcaacttgtcttacatgcaccttggacaggtgtcctgttacaaaagtggctttaccagttacaatattgag 34523324  T
Q  371 tttggatcatcattt 385  Q
     || || ||||||||    
T  34523325 cttcgagcatcattt 34523339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 170 - 394
Target Start/End: Original strand, 27630503 - 27630728
Alignment:
Q  170 gtttcttacatgcaacaagccacttgtcttccatgcaaaacaccaagtgtgcaacatg---tcacttgcatctaa-------tgcaacttatcaatgcat 259  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||   ||||||| |||| |       |||||||| |||||||||    
T  27630503 gtttcttacatgcaacaagccacttgtcttccatgcaaaacaccaagtgtacaacatgtcatcacttgtatctcatgcatcttgcaacttgtcaatgcat 27630602  T
Q  260 gcaactatccactttgccaccttgcattacattgagaaatgcaatttgtcttacctgcatcatggacatgtgccttgttacaaaagtggctttaccaaac 359  Q
     ||||| |||||||||||        ||||| ||| |||||||| ||||||||| |||| | |||||||||  |||||||||||| |||||||||||       
T  27630603 acaactgtccactttgcc--------ttaca-tgaaaaatgcaacttgtcttacttgcaccttggacatgtatcttgttacaaaattggctttaccagtt 27630693  T
Q  360 ataatattgagtttggatcatcatttaggccaatt 394  Q
    | ||||||| | |||||||||||||| ||| ||||    
T  27630694 acaatattgggcttggatcatcatttgggcaaatt 27630728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 158 - 244
Target Start/End: Original strand, 31205130 - 31205216
Alignment:
Q  158 aggtaagccattgtttcttacatgcaacaagccacttgtcttccatgcaaaacaccaagtgtgcaacatgtcacttgcatctaatgc 244  Q
    ||||||| ||| ||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  31205130 aggtaagtcatagttccttatatgcaacaagccacttgtcttccatgcaagacaccaagtgtgcaacatgtcacttgcatcttatgc 31205216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 484 - 571
Target Start/End: Complemental strand, 31247779 - 31247692
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttg 571  Q
    |||||| ||||||||||||||||| |||| ||||| |||||||||||||||||||||||| ||||||| || ||||||||||||||||    
T  31247779 caaatatcacttttggtccttttaatttgacagaatttccaagttagtcctttaagtttcgaaagtttcaattaggtccttttagttg 31247692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 485 - 586
Target Start/End: Original strand, 24707457 - 24707558
Alignment:
Q  485 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttca 584  Q
    ||||| ||||||| |||||||||||||  ||||| |||||||||||||||||||||||  |||||||||||||  || ||||||||||||||| ||||||    
T  24707457 aaatatcactttttgtccttttagttttacagaatttccaagttagtcctttaagttttcaaagttttaaatatatcattttagttgataaactatttca 24707556  T
Q  585 cc 586  Q
    ||    
T  24707557 cc 24707558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 502 - 592
Target Start/End: Original strand, 21376633 - 21376723
Alignment:
Q  502 cttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacc 592  Q
    |||||||||||  |||| || || ||| |||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||    
T  21376633 cttttagtttgatagaattttcaggttggtcctttaagtttcaaaagttttaaatatgtcattttagttgataaactatttcaccgttacc 21376723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 481 - 588
Target Start/End: Original strand, 54456657 - 54456764
Alignment:
Q  481 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaat 580  Q
    ||||||||| || ||||| ||||||||||||| ||||| ||| || |||||| |||||||||| ||||||| ||||| ||| ||||||||||||||| |     
T  54456657 ggtcaaatatcatttttgatccttttagtttgacagaatttcgaaattagtcatttaagtttcgaaagtttcaaatatgtcattttagttgataaactaa 54456756  T
Q  581 ttcaccgt 588  Q
    ||||||||    
T  54456757 ttcaccgt 54456764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 498 - 594
Target Start/End: Complemental strand, 31247705 - 31247609
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 594  Q
    ||||||||||||| | ||||| | |||||||||| ||||||||||||||||||| ||||| ||| ||||||||||||||  |||||||  |||||||    
T  31247705 ggtccttttagttggacagaattcccaagttagtgctttaagtttcaaaagtttcaaatatgtcattttagttgataaattatttcactattacccc 31247609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 481 - 570
Target Start/End: Original strand, 50530232 - 50530321
Alignment:
Q  481 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||| || ||||| ||||||||||||| ||||| || ||| |||||| |||||||||||||||| |||| |||||| ||||||||    
T  50530232 ggtcaaatatcatttttgatccttttagtttgacagaattttcaacttagtcttttaagtttcaaaagtattaattaggtcattttagtt 50530321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 526 - 594
Target Start/End: Original strand, 4276226 - 4276294
Alignment:
Q  526 gttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 594  Q
    |||||| ||||||||||||||||||| |||||| || ||||||||||||||| ||||||| ||||||||    
T  4276226 gttagttctttaagtttcaaaagtttcaaatagttcattttagttgataaactatttcactgttacccc 4276294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 484 - 594
Target Start/End: Original strand, 14629274 - 14629375
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttc 583  Q
    ||||||| || ||||||||||||| |||| ||||| | ||||||||||||||||||||||         |||||||| |||||||||||||||  |||||    
T  14629274 caaatactacgtttggtccttttactttgacagaattcccaagttagtcctttaagtttc---------aaataggttcttttagttgataaattatttc 14629364  T
Q  584 accgttacccc 594  Q
    |||||||||||    
T  14629365 accgttacccc 14629375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 484 - 570
Target Start/End: Complemental strand, 21377134 - 21377048
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||| ||| |||||||||||||||||| ||||| |||||||||| | |||||| |||| ||||||| || |||||| ||||||||    
T  21377134 caaataacacgtttggtccttttagtttgacagaatttccaagttaatactttaaatttcgaaagtttcaattaggtcattttagtt 21377048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 485 - 592
Target Start/End: Complemental strand, 21410380 - 21410273
Alignment:
Q  485 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaa-taggtccttttagttgataaacaatttc 583  Q
    |||||| | |||| |||||||||  ||| ||||| |||||||| | || |||||||||||||||||||||| || ||| ||||||||||||||| |||||    
T  21410380 aaatactaatttttgtccttttaacttgacagaa-ttccaagtcaatcatttaagtttcaaaagttttaaattatgtcattttagttgataaactatttc 21410282  T
Q  584 accgttacc 592  Q
    || ||||||    
T  21410281 actgttacc 21410273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 500 - 591
Target Start/End: Original strand, 31247192 - 31247282
Alignment:
Q  500 tccttttagtttgtcagaaattc-caagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttac 591  Q
    ||||||||||||| || |||||| |||||||||| |||||||||||||||||| ||||| ||||| ||||||||||||| |||| || |||||    
T  31247192 tccttttagtttgaca-aaattctcaagttagtc-tttaagtttcaaaagtttcaaataagtcctattagttgataaactattttactgttac 31247282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 483 - 570
Target Start/End: Original strand, 3087070 - 3087156
Alignment:
Q  483 tcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||| ||| ||| ||||||||| ||||  |||| || |||||||||| ||||||||||||||||||||||||  |||||||||||    
T  3087070 tcaaataacacatttagtccttttaatttgatagaattttcaagttagtc-tttaagtttcaaaagttttaaataaatccttttagtt 3087156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 485 - 546
Target Start/End: Complemental strand, 35556048 - 35555987
Alignment:
Q  485 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaa 546  Q
    ||||| |||||||||||||||||||||| || || | |||||||| ||||||||||||||||    
T  35556048 aaatagcacttttggtccttttagtttggcaaaattcccaagttaatcctttaagtttcaaa 35555987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 498 - 551
Target Start/End: Complemental strand, 54456856 - 54456803
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttt 551  Q
    |||||||||| |||| || || ||||||||||||||||||||||||||||||||    
T  54456856 ggtccttttaatttgacataatttccaagttagtcctttaagtttcaaaagttt 54456803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 494 - 570
Target Start/End: Complemental strand, 3088218 - 3088142
Alignment:
Q  494 ttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||||||||||||| ||||| || ||||||| | |||||| |||| ||||||| || || ||||||||||||    
T  3088218 ttttggtccttttagtttgacagaattttcaagttaatgctttaaatttcgaaagtttcaattatgtccttttagtt 3088142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 546 - 594
Target Start/End: Complemental strand, 21377032 - 21376984
Alignment:
Q  546 aagttttaaataggtccttttagttgataaacaatttcaccgttacccc 594  Q
    |||||| |||||||||||||||||| |||||| ||||||||||||||||    
T  21377032 aagtttcaaataggtccttttagtttataaactatttcaccgttacccc 21376984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 484 - 536
Target Start/End: Original strand, 53782953 - 53783005
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtccttt 536  Q
    |||||| |||||||||||||||||||||| ||||| | |||||||||||||||    
T  53782953 caaataacacttttggtccttttagtttggcagaattcccaagttagtccttt 53783005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 500 - 570
Target Start/End: Complemental strand, 5505800 - 5505729
Alignment:
Q  500 tccttttagtttgtcagaaattccaagttagtccttt-aagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||| ||||| || || ||| || |||||||||| |||||||||||||||||||||| |||||||||||    
T  5505800 tcctttttgtttgacataatttcaaaattagtccttttaagtttcaaaagttttaaatagatccttttagtt 5505729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 481 - 591
Target Start/End: Original strand, 19153864 - 19153974
Alignment:
Q  481 ggtcaaataccacttttggtccttttagtttgtcagaaattc-caagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaa 579  Q
    ||||||| ||| ||||| ||| |||||||||| ||||| ||  |||||||||  ||||||||||||| |||| ||||| ||| ||||||||||||||  |    
T  19153864 ggtcaaacacctcttttagtc-ttttagtttgacagaatttgtcaagttagttatttaagtttcaaatgtttcaaatatgtctttttagttgataaatta 19153962  T
Q  580 tttcaccgttac 591  Q
    |||||| |||||    
T  19153963 tttcactgttac 19153974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 503 - 590
Target Start/End: Original strand, 35555595 - 35555682
Alignment:
Q  503 ttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgtta 590  Q
    |||||||||| ||||| |  ||||||||||| |||| |||  ||||||| |||||  || ||||||||||||||| ||||||||||||    
T  35555595 ttttagtttgacagaattatcaagttagtccattaaattttgaaagtttcaaataaatcattttagttgataaactatttcaccgtta 35555682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 86 - 135
Target Start/End: Complemental strand, 4579137 - 4579085
Alignment:
Q  86 tttcatctcactctcaacaagctctaattcttg---ttgtgttactacttgat 135  Q
    |||| ||||||||||||||||||||||||||||   |||||||||||||||||    
T  4579137 tttcctctcactctcaacaagctctaattcttgttgttgtgttactacttgat 4579085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 502 - 567
Target Start/End: Complemental strand, 54456912 - 54456847
Alignment:
Q  502 cttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtcctttta 567  Q
    |||||||||||  |||| |||||| ||| ||| |||||| |||||||||| |||||||||||||||    
T  54456912 cttttagtttgatagaacttccaaattattcccttaagtatcaaaagtttcaaataggtcctttta 54456847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 546 - 590
Target Start/End: Complemental strand, 3088115 - 3088071
Alignment:
Q  546 aagttttaaataggtccttttagttgataaacaatttcaccgtta 590  Q
    |||||| ||||||||||||||| ||||||||| ||||||||||||    
T  3088115 aagtttcaaataggtccttttaattgataaactatttcaccgtta 3088071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 480 - 564
Target Start/End: Complemental strand, 49559576 - 49559492
Alignment:
Q  480 tggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtcctt 564  Q
    |||||||||||| ||||| |||||||||||||| || || | ||| | |||||||||| ||||   |||||| ||||||||||||    
T  49559576 tggtcaaatacctcttttagtccttttagtttgacaaaagtaccagggtagtcctttaggtttttcaagtttcaaataggtcctt 49559492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 503 - 546
Target Start/End: Complemental strand, 4276672 - 4276629
Alignment:
Q  503 ttttagtttgtcagaaattccaagttagtcctttaagtttcaaa 546  Q
    |||||||||| ||||| | |||||||||||||||||||||||||    
T  4276672 ttttagtttgacagaattcccaagttagtcctttaagtttcaaa 4276629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 499 - 546
Target Start/End: Original strand, 14964737 - 14964784
Alignment:
Q  499 gtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaa 546  Q
    |||||||||||||| ||||| || |||||||||| |||||||||||||    
T  14964737 gtccttttagtttgacagaattttcaagttagtcttttaagtttcaaa 14964784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 483 - 546
Target Start/End: Complemental strand, 50530460 - 50530397
Alignment:
Q  483 tcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaa 546  Q
    |||||||||| ||||| ||||||||||||  |  || ||| |||||||||||||||||||||||    
T  50530460 tcaaataccatttttgatccttttagtttcacttaatttctaagttagtcctttaagtttcaaa 50530397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 529 - 570
Target Start/End: Original strand, 19664436 - 19664477
Alignment:
Q  529 agtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||||||||||||||| | ||||| ||||||||||||    
T  19664436 agtcctttaagtttcaaaagtctcaaataagtccttttagtt 19664477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 150
Target Start/End: Original strand, 34469900 - 34469971
Alignment:
Q  82 tatatttcatctcactctcaacaagctctaa---ttcttgttgtgttactacttgattgcatgattgaaatt 150  Q
    |||||||  ||| ||||||||||||||||||   || |||||||||||||||||||| | |||| |||||||    
T  34469900 tatattttctcttactctcaacaagctctaattgttgttgttgtgttactacttgatcggatgaatgaaatt 34469971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 531 - 571
Target Start/End: Original strand, 13712077 - 13712117
Alignment:
Q  531 tcctttaagtttcaaaagttttaaataggtccttttagttg 571  Q
    ||||||||||||| ||||||| ||||||||||||| |||||    
T  13712077 tcctttaagtttctaaagtttcaaataggtcctttaagttg 13712117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 86 - 122
Target Start/End: Original strand, 24671290 - 24671326
Alignment:
Q  86 tttcatctcactctcaacaagctctaattcttgttgt 122  Q
    |||| |||||||||||||||||||||| |||||||||    
T  24671290 tttcctctcactctcaacaagctctaactcttgttgt 24671326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 484 - 512
Target Start/End: Complemental strand, 35545593 - 35545565
Alignment:
Q  484 caaataccacttttggtccttttagtttg 512  Q
    |||||||||||||||||||||||||||||    
T  35545593 caaataccacttttggtccttttagtttg 35545565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 103; Significance: 6e-51; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 158 - 398
Target Start/End: Complemental strand, 46191170 - 46190927
Alignment:
Q  158 aggtaagccattgtttcttacatgcaacaagccacttgtcttccatgcaaaacaccaagtgtgcaacatgtcacttgcatctaatgcaactta------- 250  Q
    ||||||||| | ||| ||||||||||||||||||||||||||||||||||| | ||||| ||||||| |||||||||||||| ||||| ||||           
T  46191170 aggtaagccttagttccttacatgcaacaagccacttgtcttccatgcaaa-ctccaagagtgcaacttgtcacttgcatctcatgcatcttacaacatg 46191072  T
Q  251 tcaatgcatgcaactatccactttgccaccttgcattacattgagaaatgcaatttgtcttacctgcatcatggacatgtgccttgttacaaaagtggct 350  Q
    |||||||||||||| ||||||||||||||| |||||||||| ||||| ||||| ||||||| | |||| |||||||||||| |||| |||||||||||||    
T  46191071 tcaatgcatgcaaccatccactttgccaccatgcattacat-gagaagtgcaacttgtctttcatgcaccatggacatgtgtcttgctacaaaagtggct 46190973  T
Q  351 ttaccaaacataatattgagtttggatcatcatttaggccaattccat 398  Q
    ||||||| |  ||||||| | ||| |||||||||| || |||||||||    
T  46190972 ttaccaatc--aatattgggcttgaatcatcatttgggtcaattccat 46190927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 174 - 347
Target Start/End: Complemental strand, 4130037 - 4129859
Alignment:
Q  174 cttacatgcaacaagccacttgtcttccatgcaaaacaccaagtgtgcaacatgtcacttgcatctaatgcaactta-------tcaatgcatgcaacta 266  Q
    ||||||||||||||||||||||||||||||||||| | ||||| ||||||| |||||||||||||| ||||| |||        |||||||||||||| |    
T  4130037 cttacatgcaacaagccacttgtcttccatgcaaa-ctccaagagtgcaacttgtcacttgcatctcatgcatcttgcaacatgtcaatgcatgcaacca 4129939  T
Q  267 tccactttgccaccttgcattacattgagaaatgcaatttgtcttacctgcatcatggacatgtgccttgttacaaaagtg 347  Q
    |||||||||||||| ||||||||| |||||| ||||| || |||| | |||| |||||||||||| |||| ||||||||||    
T  4129938 tccactttgccaccatgcattaca-tgagaagtgcaacttttctttcatgcaccatggacatgtgtcttgctacaaaagtg 4129859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 504 - 593
Target Start/End: Complemental strand, 48352797 - 48352708
Alignment:
Q  504 tttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccc 593  Q
    ||||||||| || || | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||    
T  48352797 tttagtttgacataattcccaagttagtcctttaagtttcaaaagttttaaataggtcattttagttgataaactatttcactgttaccc 48352708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 503 - 594
Target Start/End: Original strand, 8902829 - 8902920
Alignment:
Q  503 ttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 594  Q
    |||||||||| || || | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||| ||||||||    
T  8902829 ttttagtttgacaaaattcccaagttagtcctttaagtttcaaaagttttaaataagtccttttagttgataaattatttcactgttacccc 8902920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 483 - 587
Target Start/End: Original strand, 2965479 - 2965583
Alignment:
Q  483 tcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaattt 582  Q
    |||||||||| |||| ||| |||||||||| | ||| || |||||||  |||||||||||||||||||||||||| ||| ||||||||||||||| ||||    
T  2965479 tcaaataccaatttttgtctttttagtttgaccgaattttcaagttatacctttaagtttcaaaagttttaaatatgtcattttagttgataaactattt 2965578  T
Q  583 caccg 587  Q
    |||||    
T  2965579 caccg 2965583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 505 - 588
Target Start/End: Original strand, 1765763 - 1765846
Alignment:
Q  505 ttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgt 588  Q
    |||||||| || || ||| || |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  1765763 ttagtttgacataatttctaaattagtcctttaagtttcaaaagttttaaatagatccttttagttgataaactatttcaccgt 1765846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 499 - 594
Target Start/End: Original strand, 27351115 - 27351210
Alignment:
Q  499 gtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 594  Q
    |||||||||||||| || || |  ||||||||||||||||||||||||||| | ||||| ||| ||||||||||||||| ||||||||||||||||    
T  27351115 gtccttttagtttgacataattctcaagttagtcctttaagtttcaaaagtatcaaataagtcattttagttgataaactatttcaccgttacccc 27351210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 481 - 570
Target Start/End: Original strand, 11897828 - 11897917
Alignment:
Q  481 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||||||||||||||| |||||||||| ||||| |  |||||||||| |||||||||| ||||||| || |||||||||||||||    
T  11897828 ggtcaaataccacttttggtcattttagtttgacagaattctcaagttagtcatttaagtttcgaaagtttcaattaggtccttttagtt 11897917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 481 - 570
Target Start/End: Complemental strand, 29419187 - 29419098
Alignment:
Q  481 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||| |||||||||||||||||||||| || || ||||||||||||| || ||||||| ||||||| || |||||||||||||||    
T  29419187 ggtcaaatatcacttttggtccttttagtttgacataatttccaagttagtctttcaagtttcgaaagtttcaattaggtccttttagtt 29419098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 484 - 591
Target Start/End: Original strand, 39302320 - 39302427
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttc 583  Q
    ||||||||||||||| | ||||||||||| ||||| |  ||| ||| | |||||||||||||||||||  | ||||| |||||||||||||||| |||||    
T  39302320 caaataccacttttgtttcttttagtttgacagaattcacaaattaattctttaagtttcaaaagtttcgattaggttcttttagttgataaactatttc 39302419  T
Q  584 accgttac 591  Q
    ||||||||    
T  39302420 accgttac 39302427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 523 - 593
Target Start/End: Complemental strand, 10686750 - 10686680
Alignment:
Q  523 caagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccc 593  Q
    |||||||||| ||||||||| |||||||| ||||||||| ||||||||||||||| |||||||||||||||    
T  10686750 caagttagtcatttaagttttaaaagtttcaaataggtcattttagttgataaactatttcaccgttaccc 10686680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 485 - 567
Target Start/End: Complemental strand, 10686848 - 10686766
Alignment:
Q  485 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtcctttta 567  Q
    ||||| |||||||||||||||||||||| ||||| || ||||||||||||||||||||| ||||||| |  ||||||||||||    
T  10686848 aaatatcacttttggtccttttagtttgacagaattttcaagttagtcctttaagtttcgaaagtttaagttaggtcctttta 10686766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 500 - 594
Target Start/End: Original strand, 34254564 - 34254658
Alignment:
Q  500 tccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 594  Q
    ||||||||||||| ||||| | | |||| ||||||||||||||||||||||| |||||  | |||||||| ||||||| ||||||| ||||||||    
T  34254564 tccttttagtttgacagaattcctaagtcagtcctttaagtttcaaaagtttcaaatatatgcttttagtcgataaactatttcactgttacccc 34254658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 499 - 588
Target Start/End: Original strand, 44963903 - 44963992
Alignment:
Q  499 gtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgt 588  Q
    ||||||||||||||  || | | |||| |||||||||||||||||||||||||||||||  || ||| ||||||||||| ||||||||||    
T  44963903 gtccttttagtttgataggattcccaaattagtcctttaagtttcaaaagttttaaatatatcttttcagttgataaactatttcaccgt 44963992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 495 - 570
Target Start/End: Original strand, 34254499 - 34254574
Alignment:
Q  495 tttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||| ||||||||||||| ||||| |  |||||| |||||||||| |||||||||||||||||| |||||||||||    
T  34254499 tttgttccttttagtttgacagaattctcaagttggtcctttaaggttcaaaagttttaaatagatccttttagtt 34254574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 484 - 594
Target Start/End: Complemental strand, 8903354 - 8903244
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttc 583  Q
    ||||||| |||||||||| |||||||||| || || |  ||||||| ||||||||||||| ||||||| |||||  || ||||||||| ||||  |||||    
T  8903354 caaatactacttttggtctttttagtttgacataattctcaagttaatcctttaagtttcgaaagtttcaaatatatcattttagttgctaaattatttc 8903255  T
Q  584 accgttacccc 594  Q
    || ||||||||    
T  8903254 actgttacccc 8903244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 484 - 570
Target Start/End: Complemental strand, 48352877 - 48352791
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||||||||||||||||||||||| ||||| | || |||||||| |||||||||| |||| || || ||||||  |||||||    
T  48352877 caaataccacttttggtccttttagtttgacagaattcccgagttagtcttttaagtttcgaaagattcaattaggtctatttagtt 48352791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 481 - 570
Target Start/End: Complemental strand, 17898986 - 17898897
Alignment:
Q  481 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||||||||||||||||||||||||||| ||  | |  ||| ||||| |||||||||| |||| ||| || |||||||||||||||    
T  17898986 ggtcaaataccacttttggtccttttagtttgacatgattctcaaattagttctttaagttttaaaaatttcaattaggtccttttagtt 17898897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 485 - 570
Target Start/End: Original strand, 27351041 - 27351126
Alignment:
Q  485 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||| ||||||| ||||| |||| ||||| |  ||||||||||||||||||||| ||||||| || || ||||||||||||    
T  27351041 aaataccacgtttggtctttttactttgacagaattcgcaagttagtcctttaagtttcgaaagtttcaattaagtccttttagtt 27351126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 498 - 546
Target Start/End: Complemental strand, 4772698 - 4772650
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaa 546  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  4772698 ggtccttttagtttgacagaatttccaagttagtcctttaagtttcaaa 4772650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 495 - 570
Target Start/End: Original strand, 10685848 - 10685923
Alignment:
Q  495 tttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||||||||||||| ||||| || ||||||||||||||||||||| || |||| || || ||| ||||||||    
T  10685848 tttggtccttttagtttgacagaattttcaagttagtcctttaagtttcgaacgtttcaattacgtctttttagtt 10685923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 484 - 551
Target Start/End: Complemental strand, 39302823 - 39302756
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttt 551  Q
    |||||||||| |||||||||||||||||| ||||| |  |||||||||||||||| ||| ||||||||    
T  39302823 caaataccacgtttggtccttttagtttgacagaattctcaagttagtcctttaaattttaaaagttt 39302756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 503 - 570
Target Start/End: Complemental strand, 44964130 - 44964063
Alignment:
Q  503 ttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||||| ||||| |  ||||||| |||||||||||| |||||||| ||||||||||||||||||    
T  44964130 ttttagtttgacagaattctcaagttattcctttaagttttaaaagtttcaaataggtccttttagtt 44964063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 86 - 142
Target Start/End: Complemental strand, 46191277 - 46191218
Alignment:
Q  86 tttcatctcactctcaacaagctctaattcttg---ttgtgttactacttgattgcatga 142  Q
    |||| ||||||||||||||||||||||||||||   ||||||||||||||||||| ||||    
T  46191277 tttcctctcactctcaacaagctctaattcttgttgttgtgttactacttgattggatga 46191218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 498 - 570
Target Start/End: Complemental strand, 17898909 - 17898837
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||||||||||  |||| |  ||| ||||||||||||||||||||||||| ||||| ||| ||||||||    
T  17898909 ggtccttttagtttgatagaattcacaaattagtcctttaagtttcaaaagtttcaaataagtcattttagtt 17898837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 503 - 570
Target Start/End: Complemental strand, 1765984 - 1765917
Alignment:
Q  503 ttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||||| |||||||  || |||||||||||||| ||||||||||| ||||| ||| ||||||||    
T  1765984 ttttagtttgacagaaatctcatgttagtcctttaagcttcaaaagtttcaaataagtcattttagtt 1765917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 503 - 594
Target Start/End: Original strand, 10685916 - 10685998
Alignment:
Q  503 ttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 594  Q
    |||||||||| ||||| |||||||||||||||||||||||||||         || ||| ||||||||||||||| |||| |||||||||||    
T  10685916 ttttagtttgacagaatttccaagttagtcctttaagtttcaaa---------tatgtcattttagttgataaactattttaccgttacccc 10685998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 498 - 590
Target Start/End: Complemental strand, 29419110 - 29419014
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttt----taaataggtccttttagttgataaacaatttcaccgtta 590  Q
    ||||||||||||||| ||||| | | || |||||| ||||||||||||||||||    |||||| ||| ||||||||||||||  | ||||||||||    
T  29419110 ggtccttttagtttgacagaattccaaaattagtcttttaagtttcaaaagtttcaaataaataagtcattttagttgataaattacttcaccgtta 29419014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 86 - 135
Target Start/End: Complemental strand, 4130145 - 4130093
Alignment:
Q  86 tttcatctcactctcaacaagctctaattcttg---ttgtgttactacttgat 135  Q
    |||| ||||||||||||||||||||||||||||   |||||||||||||||||    
T  4130145 tttcctctcactctcaacaagctctaattcttgttgttgtgttactacttgat 4130093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 544 - 594
Target Start/End: Original strand, 48352309 - 48352359
Alignment:
Q  544 aaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 594  Q
    |||||||| |||||||| |||||||||||||||| ||||||||| ||||||    
T  48352309 aaaagtttcaaataggttcttttagttgataaactatttcaccgctacccc 48352359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 31 - 94
Target Start/End: Complemental strand, 4130216 - 4130152
Alignment:
Q  31 agacaatttactctctctatggaaataggagaatactaac-ctaggagaaactatatttcatctc 94  Q
    |||||| |||| |||||| | ||||||||| ||||||||| ||||||||||||||||||| ||||    
T  4130216 agacaaattaccctctctcttgaaataggacaatactaacactaggagaaactatatttcctctc 4130152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 484 - 564
Target Start/End: Complemental strand, 5522123 - 5522043
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtcctt 564  Q
    |||||||  ||||||||||||| |||||| || || | ||| |||||||||||||||||   |||||| ||||||||||||    
T  5522123 caaatacatcttttggtcctttaagtttgacaaaactaccaggttagtcctttaagttttttaagtttcaaataggtcctt 5522043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 546 - 594
Target Start/End: Complemental strand, 49651023 - 49650975
Alignment:
Q  546 aagttttaaataggtccttttagttgataaacaatttcaccgttacccc 594  Q
    |||||| |||||||||| |||||||||||||| ||||||| ||||||||    
T  49651023 aagtttcaaataggtccctttagttgataaactatttcactgttacccc 49650975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 503 - 546
Target Start/End: Complemental strand, 1765924 - 1765881
Alignment:
Q  503 ttttagtttgtcagaaattccaagttagtcctttaagtttcaaa 546  Q
    |||||||||| ||||| |||||||||| ||||||||||||||||    
T  1765924 ttttagtttgacagaatttccaagttactcctttaagtttcaaa 1765881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 483 - 542
Target Start/End: Original strand, 28055744 - 28055803
Alignment:
Q  483 tcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagttt 542  Q
    ||||||||| |||||||| |||| |||||| || |||| ||| |||||||||||||||||    
T  28055744 tcaaatacctcttttggttctttaagtttgacaaaaataccaggttagtcctttaagttt 28055803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 485 - 546
Target Start/End: Original strand, 4772161 - 4772222
Alignment:
Q  485 aaataccacttttggtccttttagtttgtcagaaattc-caagttagtcctttaagtttcaaa 546  Q
    ||||||||| || ||||||||||||||| || |||||| |||| |||||||||||||||||||    
T  4772161 aaataccacgttaggtccttttagtttgaca-aaattcacaaggtagtcctttaagtttcaaa 4772222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 481 - 567
Target Start/End: Complemental strand, 27351673 - 27351587
Alignment:
Q  481 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtcctttta 567  Q
    |||||||||| |||||||||||||||| |||| || || |  ||||||  | ||||||||||| |||||||||| || ||| |||||    
T  27351673 ggtcaaatacaacttttggtccttttaatttgacataattctcaagttgatactttaagtttcgaaagttttaattatgtcgtttta 27351587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 480 - 570
Target Start/End: Original strand, 49650558 - 49650648
Alignment:
Q  480 tggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||| ||||||| ||||  ||||||||||||| || || |  |||||||||||||||| |||  ||| ||| || |||||||||||||||    
T  49650558 tggtccaataccattttttatccttttagtttgacataattctcaagttagtcctttaaattttgaaaatttcaattaggtccttttagtt 49650648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 524 - 570
Target Start/End: Complemental strand, 49651096 - 49651050
Alignment:
Q  524 aagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||||||| ||||||| |||||||||||||| || ||||||||    
T  49651096 aagttagtccttcaagtttcgaaagttttaaatagatcattttagtt 49651050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 529 - 570
Target Start/End: Complemental strand, 23767660 - 23767619
Alignment:
Q  529 agtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||||||||||||||| | ||||| ||||||||||||    
T  23767660 agtcctttaagtttcaaaagtctcaaataagtccttttagtt 23767619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 498 - 551
Target Start/End: Complemental strand, 44964075 - 44964022
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttt 551  Q
    ||||||||||||||| ||||| |  |||||||||||||||| ||| ||||||||    
T  44964075 ggtccttttagtttgacagaattctcaagttagtcctttaaattttaaaagttt 44964022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 404 - 436
Target Start/End: Original strand, 622841 - 622873
Alignment:
Q  404 ttgctcttctcccatttggttttgctcattccc 436  Q
    |||||||||||||||||| ||||||||||||||    
T  622841 ttgctcttctcccatttgtttttgctcattccc 622873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 527 - 592
Target Start/End: Complemental strand, 2965958 - 2965897
Alignment:
Q  527 ttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacc 592  Q
    |||||| |||||||||||||||||    |||| ||||||||||| ||| || ||||||||||||||    
T  2965958 ttagtcatttaagtttcaaaagtt----atagatccttttagtttatagactatttcaccgttacc 2965897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 504 - 560
Target Start/End: Complemental strand, 34255053 - 34254998
Alignment:
Q  504 tttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggt 560  Q
    ||||||||| ||||| |||||||||||   |||||||||||||||||| ||||||||    
T  34255053 tttagtttgacagaatttccaagttagat-tttaagtttcaaaagtttcaaataggt 34254998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 402 - 434
Target Start/End: Original strand, 35938326 - 35938358
Alignment:
Q  402 aattgctcttctcccatttggttttgctcattc 434  Q
    |||||||||||||||||||| ||||||||||||    
T  35938326 aattgctcttctcccatttgtttttgctcattc 35938358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 546 - 594
Target Start/End: Original strand, 49650676 - 49650724
Alignment:
Q  546 aagttttaaataggtccttttagttgataaacaatttcaccgttacccc 594  Q
    |||||| |||||||| |||||||||||||||| |||||||  |||||||    
T  49650676 aagtttcaaataggttcttttagttgataaaccatttcactattacccc 49650724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 530 - 570
Target Start/End: Complemental strand, 49974019 - 49973979
Alignment:
Q  530 gtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||||||||||||||||| ||| | ||||||||||||    
T  49974019 gtcctttaagtttcaaaagtttcaaacaagtccttttagtt 49973979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 6e-48; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 158 - 398
Target Start/End: Complemental strand, 18967823 - 18967578
Alignment:
Q  158 aggtaagccattgtttcttacatgcaacaagccacttgtcttccatgcaaaacaccaagtgtgcaacatgtcacttgcatctaatgcaactta------- 250  Q
    ||||||||| | ||| |||||||||||||||||| |||||||||||||||| |   ||| ||||||| ||| |||||||||| ||||| |||            
T  18967823 aggtaagccttagttccttacatgcaacaagccatttgtcttccatgcaaa-ctttaagagtgcaacttgttacttgcatctcatgcatcttgcaacatg 18967725  T
Q  251 tcaatgcatgcaactatccactttgccaccttgcattacattgagaaatgcaatttgtcttacctgcatcatggacatgtgccttgttacaaaagtggct 350  Q
    |||||||||||||| ||||||||||||||| |||||||||| ||||| ||||| ||||||| | |||| ||||||||||||||||| |||||||||| ||    
T  18967724 tcaatgcatgcaaccatccactttgccaccatgcattacat-gagaagtgcaacttgtctttcatgcaccatggacatgtgccttgctacaaaagtgtct 18967626  T
Q  351 ttaccaaacataatattgagtttggatcatcatttaggccaattccat 398  Q
    ||||||| || ||||||| | |||||||||||||| ||||||||||||    
T  18967625 ttaccaatcacaatattgggcttggatcatcatttgggccaattccat 18967578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 494 - 594
Target Start/End: Original strand, 9901958 - 9902058
Alignment:
Q  494 ttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccc 593  Q
    ||||||||||||||||||| ||||| |||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||    
T  9901958 ttttggtccttttagtttgccagaatttccaagttagtgcttttagtttcaaaagttttaaataggtcattttagttgataaactatttcatcgttaccc 9902057  T
Q  594 c 594  Q
    |    
T  9902058 c 9902058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 484 - 570
Target Start/End: Original strand, 20575401 - 20575487
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||||| |||||||||||||||||  |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  20575401 caaataccactattggtccttttagtttgatagaatttccaagttagtcctttaagtttcgaaagttttaaataggtccttttagtt 20575487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 499 - 594
Target Start/End: Complemental strand, 17180199 - 17180104
Alignment:
Q  499 gtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 594  Q
    |||||||||||||| || || || |||||||||||||||||||| |||||||| |||||| || ||||||||||||||| ||||||||||||||||    
T  17180199 gtccttttagtttgacataattttcaagttagtcctttaagttttaaaagtttcaaatagatcattttagttgataaactatttcaccgttacccc 17180104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 194 - 354
Target Start/End: Original strand, 23014953 - 23015110
Alignment:
Q  194 tgtcttccatgcaaaacaccaagtgtgcaacatgtcacttgcatctaatgcaacttatcaatgcatgcaactatccactttgccaccttgcattacattg 293  Q
    ||||||||||| ||||||| |||||||||| |||| || |||||||  |||||||| |||||||||||||||||||  | | |||| |||||| |||||     
T  23014953 tgtcttccatgaaaaacacgaagtgtgcaatatgttacatgcatct--tgcaacttgtcaatgcatgcaactatcctatataccactttgcataacatt- 23015049  T
Q  294 agaaatgcaatttgtcttacctgcatcatggacatgtgccttgttacaaaagtggctttac 354  Q
    ||||||| || ||||||||| |||| |||||||| ||  ||||||||| |||||| |||||    
T  23015050 agaaatgtaacttgtcttacatgcaccatggacacgtttcttgttacataagtggttttac 23015110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 498 - 588
Target Start/End: Complemental strand, 32417774 - 32417684
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgt 588  Q
    |||||||| |||||| || || ||| ||||||||| ||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  32417774 ggtcctttcagtttgacaaaatttctaagttagtcatttaagtttcagaagtttcaaataggtccttttagttgataaactatttcaccgt 32417684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 498 - 588
Target Start/End: Complemental strand, 32423615 - 32423525
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgt 588  Q
    |||||||| |||||| || || ||| ||||||||| ||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  32423615 ggtcctttcagtttgacaaaatttctaagttagtcatttaagtttcagaagtttcaaataggtccttttagttgataaactatttcaccgt 32423525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 498 - 582
Target Start/End: Original strand, 20575475 - 20575559
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaattt 582  Q
    |||||||||||||||  |||| ||||||||||||||||||||||| |||||||| ||||||||| ||| ||||||||||| ||||    
T  20575475 ggtccttttagtttgatagaatttccaagttagtcctttaagttttaaaagtttcaaataggtcatttcagttgataaactattt 20575559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 481 - 570
Target Start/End: Complemental strand, 9902403 - 9902314
Alignment:
Q  481 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||| || ||||||| ||||||||||| ||||| || |||||||||| |||||||||| |||||||||| || ||||||||||||    
T  9902403 ggtcaaatatcatttttggttcttttagtttgacagaattttcaagttagtcttttaagtttcgaaagttttaattatgtccttttagtt 9902314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 485 - 570
Target Start/End: Original strand, 11527526 - 11527611
Alignment:
Q  485 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||||||||||||||||| |||| || || | | |||||||||||||||||||| ||||||| || |||||||||||||||    
T  11527526 aaataccacttttggtccttttactttgacataattcctaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtt 11527611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 481 - 570
Target Start/End: Complemental strand, 16168829 - 16168740
Alignment:
Q  481 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||||||||||||| || |||||||||| ||||| |||||| |||||| ||||||||||  |||||| || |||||||||||||||    
T  16168829 ggtcaaataccacttttgatctttttagtttgacagaatttccaaattagtcatttaagtttcgcaagtttcaattaggtccttttagtt 16168740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 498 - 591
Target Start/End: Original strand, 17179687 - 17179780
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttac 591  Q
    ||||| |||||||||  |||| || |||||||||||||||| |||||||| ||| |||||||||||||||||||||||   |||||||||||||    
T  17179687 ggtccctttagtttgatagaattttcaagttagtcctttaaatttcaaaaatttcaaataggtccttttagttgataagtcatttcaccgttac 17179780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 485 - 570
Target Start/End: Original strand, 32417459 - 32417544
Alignment:
Q  485 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||| || ||||||||||||||||||| ||||| || ||||||||||||||||||||| |||||||||| || ||| ||||||||    
T  32417459 aaatatcatttttggtccttttagtttgacagaattttcaagttagtcctttaagtttcgaaagttttaattatgtcattttagtt 32417544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 485 - 570
Target Start/End: Original strand, 32423300 - 32423385
Alignment:
Q  485 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||| || ||||||||||||||||||| ||||| || ||||||||||||||||||||| |||||||||| || ||| ||||||||    
T  32423300 aaatatcatttttggtccttttagtttgacagaattttcaagttagtcctttaagtttcgaaagttttaattatgtcattttagtt 32423385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 534 - 594
Target Start/End: Complemental strand, 10862612 - 10862552
Alignment:
Q  534 tttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 594  Q
    ||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  10862612 tttaaatttcaaaagtttcaaataggtccttttagttgataaactatttcaccgttacccc 10862552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 502 - 591
Target Start/End: Complemental strand, 11528102 - 11528013
Alignment:
Q  502 cttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttac 591  Q
    ||||||||||| || || | |||| ||| ||||||||||||||||||||| ||||| ||| ||||||||||||||| ||||||| |||||    
T  11528102 cttttagtttgacataagtcccaacttaatcctttaagtttcaaaagtttcaaatatgtcattttagttgataaactatttcactgttac 11528013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 503 - 570
Target Start/End: Original strand, 32417537 - 32417604
Alignment:
Q  503 ttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||||| || || || |||||||||| |||||||||||||||||||||||| ||||||||||||    
T  32417537 ttttagtttgacaaaattttcaagttagtcatttaagtttcaaaagttttaaatatgtccttttagtt 32417604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 503 - 570
Target Start/End: Original strand, 32423378 - 32423445
Alignment:
Q  503 ttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||||| || || || |||||||||| |||||||||||||||||||||||| ||||||||||||    
T  32423378 ttttagtttgacaaaattttcaagttagtcatttaagtttcaaaagttttaaatatgtccttttagtt 32423445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 485 - 567
Target Start/End: Original strand, 2839615 - 2839697
Alignment:
Q  485 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtcctttta 567  Q
    ||||| ||||||||||||||||| ||||  |||| |  |||||||||| |||||||||||||||||| || ||||||||||||    
T  2839615 aaatatcacttttggtccttttaatttgaaagaattctcaagttagtcgtttaagtttcaaaagtttcaattaggtcctttta 2839697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 527 - 593
Target Start/End: Original strand, 10962830 - 10962896
Alignment:
Q  527 ttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccc 593  Q
    |||||||||||||||| |||||||| ||||| ||| ||||||||||||||| |||| ||||||||||    
T  10962830 ttagtcctttaagttttaaaagtttcaaatatgtcattttagttgataaactattttaccgttaccc 10962896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 484 - 570
Target Start/End: Original strand, 16168454 - 16168540
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||||||||||||||||||||||||  |||| |  || |||||||||||||||||  ||||||| || |||||| ||||||||    
T  16168454 caaataccacttttggtccttttagtttgatagaattctcacgttagtcctttaagttttgaaagtttcaattaggtcattttagtt 16168540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 498 - 556
Target Start/End: Complemental strand, 20575658 - 20575600
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaat 556  Q
    ||||||||||||||| ||||| | |||||||||||||||||||||||||||||| ||||    
T  20575658 ggtccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagtttcaaat 20575600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 494 - 594
Target Start/End: Original strand, 10407308 - 10407408
Alignment:
Q  494 ttttggtccttttagtttgtcagaaattccaa-gttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacc 592  Q
    |||| |||||||||||||| || ||||||| | |||| | ||||||||||||||||||| ||||| ||| ||||||||||||||  ||||||| ||||||    
T  10407308 ttttagtccttttagtttgaca-aaattcctatgttactgctttaagtttcaaaagtttcaaatatgtcattttagttgataaattatttcactgttacc 10407406  T
Q  593 cc 594  Q
    ||    
T  10407407 cc 10407408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 498 - 586
Target Start/End: Original strand, 16168528 - 16168607
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcacc 586  Q
    |||| |||||||||| ||||| ||||||||||||||||||||||||         ||||||||||||||||||||||||| ||||||||    
T  16168528 ggtcattttagtttgacagaatttccaagttagtcctttaagtttc---------aaataggtccttttagttgataaactatttcacc 16168607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 534 - 598
Target Start/End: Original strand, 17131620 - 17131684
Alignment:
Q  534 tttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccccctgt 598  Q
    |||||||||||||||||||||||| ||| ||||||||||||||  ||||||| ||||||| ||||    
T  17131620 tttaagtttcaaaagttttaaatatgtcattttagttgataaattatttcactgttaccctctgt 17131684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 499 - 555
Target Start/End: Original strand, 32417593 - 32417649
Alignment:
Q  499 gtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaa 555  Q
    |||||||||||||| ||||| |||||| ||||||||||||||||||||| |||||||    
T  32417593 gtccttttagtttgacagaatttccaaattagtcctttaagtttcaaaatttttaaa 32417649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 499 - 555
Target Start/End: Original strand, 32423434 - 32423490
Alignment:
Q  499 gtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaa 555  Q
    |||||||||||||| ||||| |||||| ||||||||||||||||||||| |||||||    
T  32423434 gtccttttagtttgacagaatttccaaattagtcctttaagtttcaaaatttttaaa 32423490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 487 - 570
Target Start/End: Complemental strand, 10862720 - 10862637
Alignment:
Q  487 ataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||| |||||||||||||||||| ||||| |  ||||||||||||||||||||  ||||||| || || ||| ||||||||    
T  10862720 ataccacgtttggtccttttagtttgacagaattctcaagttagtcctttaagttttgaaagtttcaattaagtcattttagtt 10862637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 499 - 594
Target Start/End: Complemental strand, 24139568 - 24139473
Alignment:
Q  499 gtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 594  Q
    ||||||||||||||  |||| |  || |||||||||||||||||||||| ||| ||||| ||| ||||||||||||||  ||||||| || |||||    
T  24139568 gtccttttagtttgatagaattatcaggttagtcctttaagtttcaaaaatttcaaataagtctttttagttgataaattatttcactgtaacccc 24139473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 484 - 570
Target Start/End: Complemental strand, 11528180 - 11528094
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||| || ||||||||||| |||||| | ||| || |||||||||||||||||||| |||||||| |||||  | |||||||||    
T  11528180 caaatacaacgtttggtcctttaagtttgaccgaattttcaagttagtcctttaagtttaaaaagtttcaaatatattcttttagtt 11528094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 484 - 570
Target Start/End: Complemental strand, 20575780 - 20575696
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||| |||||||| |||||||||| ||||| |  |||||||||  |||||||||| ||||||||||||| ||||||||||||    
T  20575780 caaataccatttttggtc-ttttagtttgacagaattctcaagttagtt-tttaagtttcgaaagttttaaataagtccttttagtt 20575696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 484 - 570
Target Start/End: Complemental strand, 32417848 - 32417762
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||||||||| || |||||||||  ||||| | |||||||||| |||||| |||| ||||||| || |||||||||| ||||    
T  32417848 caaataccacttttgatctttttagttttacagaattcccaagttagttctttaactttcgaaagtttcaattaggtcctttcagtt 32417762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 484 - 570
Target Start/End: Complemental strand, 32423689 - 32423603
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||||||||| || |||||||||  ||||| | |||||||||| |||||| |||| ||||||| || |||||||||| ||||    
T  32423689 caaataccacttttgatctttttagttttacagaattcccaagttagttctttaactttcgaaagtttcaattaggtcctttcagtt 32423603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 485 - 570
Target Start/End: Complemental strand, 2840186 - 2840101
Alignment:
Q  485 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||| ||| |||||||||||||||||  || || |  |||||||||| ||||||||||||||||||  ||||| |||||||||||    
T  2840186 aaatatcacgtttggtccttttagtttaacataattctcaagttagtcatttaagtttcaaaagtttcgaatagatccttttagtt 2840101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 498 - 594
Target Start/End: Original strand, 11527599 - 11527686
Alignment:
Q  498 ggtccttttagtttgtcagaaattc-caagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 594  Q
    ||||||||||||||| || |||||| ||||||||||||||||||||||||         |||||| ||||||||||||||| ||||||||||||||||    
T  11527599 ggtccttttagtttgaca-aaattcacaagttagtcctttaagtttcaaa---------taggtcattttagttgataaactatttcaccgttacccc 11527686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 498 - 570
Target Start/End: Complemental strand, 16168752 - 16168680
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||||||||| ||||| |  ||||||||||  ||| ||||||||||||| ||||||||| ||||||||    
T  16168752 ggtccttttagtttgacagaattctcaagttagtctattacgtttcaaaagtttcaaataggtctttttagtt 16168680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 86 - 135
Target Start/End: Complemental strand, 18967923 - 18967871
Alignment:
Q  86 tttcatctcactctcaacaagctctaattcttg---ttgtgttactacttgat 135  Q
    |||| ||||||||||||||||||||||||||||   |||||||||||||||||    
T  18967923 tttcctctcactctcaacaagctctaattcttgttgttgtgttactacttgat 18967871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 6174631 - 6174684
Alignment:
Q  185 caagccacttgtcttccatgcaaaacaccaagtgtgcaacatgtcacttgcatc 238  Q
    |||||||||||| || |||||||||||||||| ||| ||||||||||| |||||    
T  6174631 caagccacttgtgtttcatgcaaaacaccaagggtgaaacatgtcactagcatc 6174684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 557 - 594
Target Start/End: Complemental strand, 9946716 - 9946679
Alignment:
Q  557 aggtccttttagttgataaacaatttcaccgttacccc 594  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  9946716 aggtccttttagttgataaactatttcaccgttacccc 9946679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 553 - 594
Target Start/End: Complemental strand, 28630632 - 28630591
Alignment:
Q  553 aaataggtccttttagttgataaacaatttcaccgttacccc 594  Q
    ||||||||||||||||||||||||| |||||||| |||||||    
T  28630632 aaataggtccttttagttgataaactatttcacctttacccc 28630591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 546 - 590
Target Start/End: Complemental strand, 2840074 - 2840030
Alignment:
Q  546 aagttttaaataggtccttttagttgataaacaatttcaccgtta 590  Q
    |||||| ||||||||| ||||||||||||||| ||||||||||||    
T  2840074 aagtttcaaataggtcattttagttgataaactatttcaccgtta 2840030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 485 - 592
Target Start/End: Complemental strand, 10407817 - 10407709
Alignment:
Q  485 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttc-aaaagttttaaataggtccttttagttgataaacaatttc 583  Q
    ||||| || ||||| ||||||||||||  | ||| |  |||||||||| || ||||||  |||||||| ||||| ||| ||||||||||||||| |||||    
T  10407817 aaatatcatttttgatccttttagtttaacggaattctcaagttagtcattcaagtttttaaaagtttcaaatatgtcattttagttgataaactatttc 10407718  T
Q  584 accgttacc 592  Q
    || ||||||    
T  10407717 actgttacc 10407709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 523 - 591
Target Start/End: Complemental strand, 17132251 - 17132183
Alignment:
Q  523 caagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttac 591  Q
    ||||||| |||||||||||||||||| || ||||| ||| | |||||| |||||| |||| ||||||||    
T  17132251 caagttaatcctttaagtttcaaaagattcaaataagtcatattagtttataaactattttaccgttac 17132183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 523 - 570
Target Start/End: Complemental strand, 10963209 - 10963162
Alignment:
Q  523 caagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||||  ||||| |||||||||||||||||||||| ||||||||    
T  10963209 caagttagttttttaaatttcaaaagttttaaataggtcattttagtt 10963162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 527 - 570
Target Start/End: Complemental strand, 24139600 - 24139557
Alignment:
Q  527 ttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||||||||||| |||||||||| || ||||||||||||    
T  24139600 ttagtcctttaagtttcgaaagttttaattaagtccttttagtt 24139557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 436
Target Start/End: Original strand, 7477028 - 7477061
Alignment:
Q  403 attgctcttctcccatttggttttgctcattccc 436  Q
    |||||||||||||||||||||||| |||||||||    
T  7477028 attgctcttctcccatttggttttactcattccc 7477061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 436
Target Start/End: Original strand, 7477394 - 7477427
Alignment:
Q  403 attgctcttctcccatttggttttgctcattccc 436  Q
    |||||||||||||||||||||||| |||||||||    
T  7477394 attgctcttctcccatttggttttactcattccc 7477427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 436
Target Start/End: Original strand, 7477760 - 7477793
Alignment:
Q  403 attgctcttctcccatttggttttgctcattccc 436  Q
    |||||||||||||||||||||||| |||||||||    
T  7477760 attgctcttctcccatttggttttactcattccc 7477793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 402 - 434
Target Start/End: Original strand, 7271654 - 7271686
Alignment:
Q  402 aattgctcttctcccatttggttttgctcattc 434  Q
    |||||||||||||||||||| ||||||||||||    
T  7271654 aattgctcttctcccatttgtttttgctcattc 7271686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 498 - 546
Target Start/End: Complemental strand, 16168692 - 16168644
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaa 546  Q
    |||| |||||||||| | ||||| ||||||||||| |||||||||||||    
T  16168692 ggtctttttagtttgactgaaatcccaagttagtcttttaagtttcaaa 16168644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 487 - 551
Target Start/End: Complemental strand, 28630749 - 28630685
Alignment:
Q  487 ataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttt 551  Q
    |||||||||||||||||||||||||| || || | | ||||||||  |||||||||  |||||||    
T  28630749 ataccacttttggtccttttagtttgacataattcctaagttagttttttaagttttgaaagttt 28630685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 98; Significance: 6e-48; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 174 - 398
Target Start/End: Complemental strand, 10427203 - 10426974
Alignment:
Q  174 cttacatgcaacaagccacttgtcttccatgcaaaacaccaagtgtgcaacatgtcacttgcatctaatgcaactta-------tcaatgcatgcaacta 266  Q
    ||||||||||||||||||||||||||||||||||| |  |||| ||||||| |||||||||||||| ||||| |||        |||||||||||||| |    
T  10427203 cttacatgcaacaagccacttgtcttccatgcaaa-cttcaagagtgcaacttgtcacttgcatctcatgcatcttgcaacatgtcaatgcatgcaacca 10427105  T
Q  267 tccactttgccaccttgcattacattgagaaatgcaatttgtcttacctgcatcatggacatgtgccttgttacaaaagtggctttaccaaacataatat 366  Q
    |||||||||||||| |||||||||| ||||| ||||| ||| ||| | |||| |||| ||||||| |||| |||||||||||||||||||| || |||||    
T  10427104 tccactttgccaccatgcattacat-gagaagtgcaacttgcctttcatgcaccatgaacatgtgtcttgctacaaaagtggctttaccaatcacaatat 10427006  T
Q  367 tgagtttggatcatcatttaggccaattccat 398  Q
    ||  ||||||||||||||| ||||||||||||    
T  10427005 tggatttggatcatcatttgggccaattccat 10426974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 482 - 591
Target Start/End: Original strand, 52567730 - 52567839
Alignment:
Q  482 gtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatt 581  Q
    |||||||| ||| |||||||||||||||||| ||||| |   ||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||    
T  52567730 gtcaaatatcacgtttggtccttttagtttgacagaattcttaagttagtcatttaagtttcaaaagttttaaataggtcattttagttgataaactatt 52567829  T
Q  582 tcaccgttac 591  Q
    |||| |||||    
T  52567830 tcactgttac 52567839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 503 - 594
Target Start/End: Original strand, 5387194 - 5387285
Alignment:
Q  503 ttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 594  Q
    |||||||||| ||||| | ||||||||| |||||||||||||||||||| |||||| || ||||||||||||||||||||||||||||||||    
T  5387194 ttttagtttgacagaattcccaagttagccctttaagtttcaaaagtttcaaatagatctttttagttgataaacaatttcaccgttacccc 5387285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 484 - 580
Target Start/End: Complemental strand, 42116143 - 42116047
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaat 580  Q
    ||||||||| |||||||| |||||||||| || || ||  |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  42116143 caaataccatttttggtcattttagtttgacaaaatttttaagttagtcctttaagtttcaaaagttttaaataggtctttttaattgataaacaat 42116047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 499 - 592
Target Start/End: Original strand, 52181779 - 52181872
Alignment:
Q  499 gtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacc 592  Q
    |||||||||||||| ||||| | |||||||||||||||||||||||||||||| ||| | ||| ||||| ||||||||| ||||||||||||||    
T  52181779 gtccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagtttcaaacatgtcattttaattgataaactatttcaccgttacc 52181872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 481 - 593
Target Start/End: Complemental strand, 19632323 - 19632212
Alignment:
Q  481 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaat 580  Q
    |||||||||| | ||||||||||||||||||| ||||| |  ||| |||||| |||||||||||||||||||||||| ||| ||||||||||||||| |     
T  19632323 ggtcaaatacgatttttggtccttttagtttgacagaattctcaaattagtc-tttaagtttcaaaagttttaaatatgtcattttagttgataaactac 19632225  T
Q  581 ttcaccgttaccc 593  Q
    ||||| |||||||    
T  19632224 ttcactgttaccc 19632212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 482 - 570
Target Start/End: Original strand, 43098169 - 43098257
Alignment:
Q  482 gtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||||||||||||||||||||||||| || || ||| |||||||||||||||||||  ||||||| || |||||||||||||||    
T  43098169 gtcaaataccacttttggtccttttagtttgacaaaatttctaagttagtcctttaagttttgaaagtttcaattaggtccttttagtt 43098257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 502 - 593
Target Start/End: Complemental strand, 8408917 - 8408826
Alignment:
Q  502 cttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccc 593  Q
    ||||||||||| ||||| || |||||||||| |||||||||||||||||| ||||||||| | ||||||||||||| ||||||||| |||||    
T  8408917 cttttagtttgacagaattttcaagttagtcatttaagtttcaaaagtttcaaataggtcatcttagttgataaactatttcaccgctaccc 8408826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 498 - 585
Target Start/End: Complemental strand, 26330008 - 26329921
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcac 585  Q
    ||||||||||||||| || || | ||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||| |||||||    
T  26330008 ggtccttttagtttgacataattcccaagttagtcatttaagtttcaaaagtttcaaataggtcattttagttgataaactatttcac 26329921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 498 - 592
Target Start/End: Original strand, 31229318 - 31229412
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacc 592  Q
    |||| ||||||||||  |||| |  |||||||||| |||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||    
T  31229318 ggtctttttagtttgatagaattctcaagttagtcatttaagtttcaaaagtttcaaataggttcttttagttgataaactatttcaccgttacc 31229412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 500 - 570
Target Start/End: Complemental strand, 26330066 - 26329996
Alignment:
Q  500 tccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||||||  ||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  26330066 tccttttagttttacagaattcccaagttagtcctttaagtttcaaaagtttcaaataggtccttttagtt 26329996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 497 - 570
Target Start/End: Original strand, 41735814 - 41735887
Alignment:
Q  497 tggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||||||||||  || || | |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  41735814 tggtccttttagtttaacataattcccaagttagtcctttaagtttcaaaagtttcaaataggtccttttagtt 41735887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 485 - 570
Target Start/End: Complemental strand, 43098546 - 43098461
Alignment:
Q  485 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||| ||||||||||||||||||| ||||| ||| || ||||| ||||||||||| ||||||| || |||||||||||||||    
T  43098546 aaataccatttttggtccttttagtttgacagaatttctaacttagttctttaagtttcgaaagtttcaattaggtccttttagtt 43098461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 485 - 584
Target Start/End: Original strand, 2508252 - 2508349
Alignment:
Q  485 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttca 584  Q
    |||||| | ||||| ||||||||||||| ||||| |||||||||||||||||||| ||||||||||| ||||  ||| || |||||||||||| ||||||    
T  2508252 aaatactatttttgatccttttagtttgacagaatttccaagttagtcctttaagcttcaaaagtttcaaat--gtcattctagttgataaaccatttca 2508349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 498 - 570
Target Start/End: Complemental strand, 2789036 - 2788964
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||| |||||||||| ||||| || ||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  2789036 ggtcattttagtttgacagaattttcaagttagtcctttaagtttcaaaagtttcaaataggtcattttagtt 2788964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 498 - 594
Target Start/End: Complemental strand, 52568256 - 52568161
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 594  Q
    |||| ||||||||||  |||| |  ||||| ||||||||||||||||||||||| |||||| ||| |||||||||||||| ||||||||||||||||    
T  52568256 ggtcattttagtttgatagaattctcaagtcagtcctttaagtttcaaaagtttcaaatagatcc-tttagttgataaactatttcaccgttacccc 52568161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 485 - 588
Target Start/End: Complemental strand, 36890721 - 36890618
Alignment:
Q  485 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttca 584  Q
    ||||| |||||||  ||||||||||||| ||||| ||  |||||| || ||||||||| ||||||||  |||||||| ||||||||||||||| ||||||    
T  36890721 aaatatcacttttaatccttttagtttgacagaatttttaagttaatcatttaagttttaaaagtttataataggtcattttagttgataaactatttca 36890622  T
Q  585 ccgt 588  Q
    ||||    
T  36890621 ccgt 36890618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 481 - 570
Target Start/End: Original strand, 2788776 - 2788865
Alignment:
Q  481 ggtcaaataccacttttggtccttttagtttgtcagaaattc-caagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||||||||||||  |||||||||||||   ||||||| ||||||||||||||||||||| ||||||| || |||||||||||||||    
T  2788776 ggtcaaataccacttttaatccttttagtttgat-gaaattctcaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtt 2788865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 484 - 570
Target Start/End: Complemental strand, 26330142 - 26330056
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||||||||| |||||||||||||| ||||| |  ||||||||||||||||||||  ||||||| || ||| |||||||||||    
T  26330142 caaataccacttttagtccttttagtttgacagaattctcaagttagtcctttaagttttgaaagtttcaattagatccttttagtt 26330056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 498 - 570
Target Start/End: Complemental strand, 43098473 - 43098401
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||||||||| || || | |||||||||||||||||||||||||||||| ||||| ||| ||||||||    
T  43098473 ggtccttttagtttgacaaaattcccaagttagtcctttaagtttcaaaagtttcaaatatgtcattttagtt 43098401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 530 - 594
Target Start/End: Original strand, 44915933 - 44915997
Alignment:
Q  530 gtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 594  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||  ||||||| ||||||||    
T  44915933 gtcctttaagtttcaaaagttttaaaaaggtctttttagttgataaattatttcactgttacccc 44915997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 484 - 570
Target Start/End: Original strand, 19631752 - 19631838
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattc-caagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||| ||| ||||||||||||| |||| || |||||| ||||||||||||||||||||| ||||||| || |||||||||||||||    
T  19631752 caaatatcacgtttggtccttttattttgaca-aaattctcaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtt 19631838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 523 - 590
Target Start/End: Original strand, 42115660 - 42115727
Alignment:
Q  523 caagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgtta 590  Q
    |||||||||||||||||| |||||||||||||||| |||||||||| | |||||| ||||||| ||||    
T  42115660 caagttagtcctttaagtctcaaaagttttaaataagtccttttagataataaactatttcacggtta 42115727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 479 - 570
Target Start/End: Original strand, 52865940 - 52866031
Alignment:
Q  479 ttggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||| |||||||||||||| |||||||||||||| ||||| |  ||||||||||||||||||||  ||||||| || || || |||||||||    
T  52865940 ttggccaaataccactttttgtccttttagtttgacagaattctcaagttagtcctttaagttttgaaagtttaaattatgttcttttagtt 52866031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 472 - 547
Target Start/End: Complemental strand, 52866441 - 52866366
Alignment:
Q  472 aaaaatgttggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaa 547  Q
    |||||| ||| ||||||||||  |||||| ||||||||||| ||||| | ||||||||||||||||||||||||||    
T  52866441 aaaaatattgttcaaataccatgtttggttcttttagtttgacagaattcccaagttagtcctttaagtttcaaaa 52866366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 498 - 588
Target Start/End: Original strand, 22025116 - 22025206
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgt 588  Q
    |||| |||||||||| ||||| |   |||||||||| ||||| || |||||||| |||||||| |||||||||||||||| ||||||||||    
T  22025116 ggtcattttagtttgacagaattcttaagttagtccgttaagattaaaaagtttcaaataggttcttttagttgataaactatttcaccgt 22025206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 485 - 570
Target Start/End: Complemental strand, 52183558 - 52183473
Alignment:
Q  485 aaataccacttttggtccttttagtttgtcagaaattc-caagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||| |||||||||||||||||  || |||||| ||||||||||||||||||||| ||||||| || |||| ||||||||||    
T  52183558 aaataccacgtttggtccttttagttttaca-aaattctcaagttagtcctttaagtttcgaaagtttcaattaggcccttttagtt 52183473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 498 - 551
Target Start/End: Original strand, 26329826 - 26329879
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttt 551  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||    
T  26329826 ggtccttttagtttgacagaatttccaagttagccctttaagtttcaaaagttt 26329879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 524 - 576
Target Start/End: Complemental strand, 2508730 - 2508678
Alignment:
Q  524 aagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaa 576  Q
    |||||| |||||||| |||||||||||||||||| ||||||||||||||||||    
T  2508730 aagttactcctttaaatttcaaaagttttaaatatgtccttttagttgataaa 2508678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 500 - 590
Target Start/End: Original strand, 8408407 - 8408497
Alignment:
Q  500 tccttttagtttgtcagaaattc-caagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgtta 590  Q
    ||||||||||||| || |||||| ||||| |||| ||||||||| |||||||| ||||| ||| ||||||||||||| | ||||||||||||    
T  8408407 tccttttagtttgaca-aaattctcaagtaagtcttttaagtttgaaaagtttcaaataagtcattttagttgataagctatttcaccgtta 8408497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 481 - 546
Target Start/End: Original strand, 8408337 - 8408402
Alignment:
Q  481 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaa 546  Q
    ||||||||| ||  |||||||||||||||||| || || |||||||||||| ||||||||||||||    
T  8408337 ggtcaaatatcaagtttggtccttttagtttgacaaaatttccaagttagttctttaagtttcaaa 8408402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 523 - 584
Target Start/End: Complemental strand, 35024016 - 35023955
Alignment:
Q  523 caagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttca 584  Q
    |||||||||| ||||||||| ||||||||| ||| | |||||||||||||||||| ||||||    
T  35024016 caagttagtcttttaagttttaaaagtttttaattgatccttttagttgataaactatttca 35023955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 503 - 556
Target Start/End: Complemental strand, 35046603 - 35046550
Alignment:
Q  503 ttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaat 556  Q
    |||||||||| || || | |||||||||||||||||||||||||||||||||||    
T  35046603 ttttagtttgacataattcccaagttagtcctttaagtttcaaaagttttaaat 35046550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 537 - 585
Target Start/End: Original strand, 43098280 - 43098328
Alignment:
Q  537 aagtttcaaaagttttaaataggtccttttagttgataaacaatttcac 585  Q
    ||||||||||||||| ||||| ||||||||||||||||||| |||||||    
T  43098280 aagtttcaaaagtttcaaataagtccttttagttgataaactatttcac 43098328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 400 - 468
Target Start/End: Complemental strand, 28947099 - 28947029
Alignment:
Q  400 aaaattgctcttctcccatttggttttgctcattccccttttacttttgtgccta--tgagctaactcacg 468  Q
    ||||||||||||||||  |||| ||||||| || |||||||||||||||||||||  |||| |||||||||    
T  28947099 aaaattgctcttctcctttttgcttttgcttatcccccttttacttttgtgcctacgtgagttaactcacg 28947029  T

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Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 86 - 135
Target Start/End: Complemental strand, 10427326 - 10427274
Alignment:
Q  86 tttcatctcactctcaacaagctctaattcttg---ttgtgttactacttgat 135  Q
    |||| ||||||||||||||||||||||||||||   |||||||||||||||||    
T  10427326 tttcctctcactctcaacaagctctaattcttgttgttgtgttactacttgat 10427274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 484 - 570
Target Start/End: Complemental strand, 22025436 - 22025350
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||| |||||| ||| |||||||||| || || |  ||||||||||||| ||||||| ||||||| || ||||| |||||||||    
T  22025436 caaatacaacttttagtcattttagtttgacataattatcaagttagtccttgaagtttcgaaagtttcaattaggttcttttagtt 22025350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 485 - 551
Target Start/End: Complemental strand, 23085340 - 23085275
Alignment:
Q  485 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttt 551  Q
    ||||| || ||||||| ||||||||||| ||||||||  |||||||| |||||||||||||||||||    
T  23085340 aaatatcatttttggttcttttagtttgacagaaattttaagttagt-ctttaagtttcaaaagttt 23085275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 504 - 570
Target Start/End: Original strand, 35046437 - 35046503
Alignment:
Q  504 tttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||| || || || ||| ||||||||||||||||| |||||||||| ||| |||||||||||    
T  35046437 tttagtttgacataattttcaatttagtcctttaagtttcgaaagttttaattagatccttttagtt 35046503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 484 - 538
Target Start/End: Complemental strand, 41736012 - 41735958
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaa 538  Q
    ||||||||||||||| ||||||||||||| ||||| | |||||||||| ||||||    
T  41736012 caaataccacttttgatccttttagtttgacagaattcccaagttagtactttaa 41735958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 484 - 546
Target Start/End: Complemental strand, 44916386 - 44916324
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaa 546  Q
    |||||||  ||||| |||||||||||||| || || || ||||||||||||||||||||||||    
T  44916386 caaatacatcttttagtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaa 44916324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 529 - 594
Target Start/End: Original strand, 19681283 - 19681348
Alignment:
Q  529 agtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 594  Q
    ||||||||||| | |||| | || ||||||||| ||||||||||||||| |||||||| |||||||    
T  19681283 agtcctttaaggtgcaaaggattcaaataggtcattttagttgataaactatttcaccattacccc 19681348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 484 - 529
Target Start/End: Original strand, 22025055 - 22025100
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagtta 529  Q
    ||||||||||||||||||||||||||||| ||||| | ||||||||    
T  22025055 caaataccacttttggtccttttagtttgacagaattcccaagtta 22025100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 479 - 543
Target Start/End: Complemental strand, 8409000 - 8408936
Alignment:
Q  479 ttggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttc 543  Q
    ||||||||||| ||||||||||| |||||||||| || || |  |||||||||| ||||||||||    
T  8409000 ttggtcaaatatcacttttggtcattttagtttgacataattctcaagttagtcatttaagtttc 8408936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 502 - 570
Target Start/End: Complemental strand, 22025358 - 22025291
Alignment:
Q  502 cttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||||| ||||| | |||||||||||||||||| |||||| |||| ||||||||  ||||||||    
T  22025358 cttttagtttgacagaattcccaagttagtcctttaag-ttcaaaggtttcaaataggtaattttagtt 22025291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 498 - 546
Target Start/End: Original strand, 41735875 - 41735923
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaa 546  Q
    ||||||||||||||| ||||| |||||||| |||||||||| |||||||    
T  41735875 ggtccttttagtttgacagaatttccaagtcagtcctttaaatttcaaa 41735923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 500 - 551
Target Start/End: Original strand, 5387131 - 5387182
Alignment:
Q  500 tccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttt 551  Q
    ||||||||||||| | ||| ||| ||||||||||||||||||| ||||||||    
T  5387131 tccttttagtttgactgaatttctaagttagtcctttaagttttaaaagttt 5387182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 546 - 593
Target Start/End: Original strand, 19631869 - 19631916
Alignment:
Q  546 aagttttaaataggtccttttagttgataaacaatttcaccgttaccc 593  Q
    |||||| ||||||||| ||||||||||||||| |||| ||||||||||    
T  19631869 aagtttcaaataggtcattttagttgataaactattttaccgttaccc 19631916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 500 - 551
Target Start/End: Original strand, 35046493 - 35046544
Alignment:
Q  500 tccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttt 551  Q
    ||||||||||||| ||||| | | || |||||||||||||||||||||||||    
T  35046493 tccttttagtttgacagaattcctaaattagtcctttaagtttcaaaagttt 35046544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 546 - 593
Target Start/End: Original strand, 52866058 - 52866105
Alignment:
Q  546 aagttttaaataggtccttttagttgataaacaatttcaccgttaccc 593  Q
    |||||| ||||||||| ||||||||||||||| |||||| ||||||||    
T  52866058 aagtttcaaataggtcattttagttgataaactatttcagcgttaccc 52866105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 481 - 570
Target Start/End: Original strand, 9319996 - 9320085
Alignment:
Q  481 ggtcaaataccacttttggtccttttagtttgtcagaaattc-caagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||| ||||||| || ||||||||||| || |||||| |||||||||  |||||||||| ||||||| || || || |||||||||    
T  9319996 ggtcaaataacacttttcgttcttttagtttgaca-aaattctcaagttagttttttaagtttcgaaagtttcaattaagttcttttagtt 9320085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 42022938 - 42022865
Alignment:
Q  165 ccattgtttcttacatgcaacaagccacttgtcttccatgcaaaacaccaagtgtgcaacatgtcacttgcatct 239  Q
    |||| ||| |||||||||||||||||||||||||| || || | ||| ||||||||||| |||||  ||||||||    
T  42022938 ccatagttccttacatgcaacaagccacttgtctttcaagctataca-caagtgtgcaaaatgtcgtttgcatct 42022865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 529 - 570
Target Start/End: Complemental strand, 31617681 - 31617640
Alignment:
Q  529 agtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||||||||||||||||| ||| | ||||||||||||    
T  31617681 agtcctttaagtttcaaaagtttcaaacaagtccttttagtt 31617640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 396 - 436
Target Start/End: Complemental strand, 40422049 - 40422009
Alignment:
Q  396 catgaaaattgctcttctcccatttggttttgctcattccc 436  Q
    ||||||||||||||||||||| || | ||||||||||||||    
T  40422049 catgaaaattgctcttctccctttcgtttttgctcattccc 40422009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 494 - 570
Target Start/End: Complemental strand, 52568320 - 52568244
Alignment:
Q  494 ttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||| ||| |||||||||| || || | |||| ||||| |||||| |||||||||||| || |||||| ||||||||    
T  52568320 ttttagtcattttagtttgacataactcccaatttagtactttaaatttcaaaagtttcaattaggtcattttagtt 52568244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 86; Significance: 8e-41; HSPs: 100)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 159 - 391
Target Start/End: Original strand, 16184010 - 16184247
Alignment:
Q  159 ggtaagccattgtttcttacatgcaacaagccacttgtcttccatgcaaaacaccaagtgtgcaacatgtcacttgcatctaatgcaactta-------t 251  Q
    |||||||| | ||| ||||||||||||||||||||||||||||||| ||||| ||||| ||||||| |||||||||||||| ||||| |||        |    
T  16184010 ggtaagccttagttccttacatgcaacaagccacttgtcttccatg-aaaactccaagagtgcaacttgtcacttgcatctcatgcatcttgcaacatgt 16184108  T
Q  252 caatgcatgcaactatccactttgccaccttgcattacattgagaaatgcaatttgtcttacctgcatcatggacatgtgccttgttacaaaagtggctt 351  Q
    ||||||||||||| || |||||||||||| ||||||||||  |||| ||||| ||||||| | |||| |||| ||||||| |||| | ||||||||| ||    
T  16184109 caatgcatgcaaccattcactttgccaccatgcattacata-agaagtgcaacttgtctttcatgcaccatgtacatgtgtcttgctgcaaaagtggttt 16184207  T
Q  352 taccaaacataatattgagtttggatcatcatttaggcca 391  Q
    |||||| || ||||||| | |||||||||||||| |||||    
T  16184208 taccaatcacaatattgggcttggatcatcatttgggcca 16184247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 158 - 385
Target Start/End: Original strand, 8140335 - 8140568
Alignment:
Q  158 aggtaagccattgtttcttacatgcaacaagccacttgtcttccatgcaaaacaccaagtgtgcaacatgtcacttgcatctaatgca-------actta 250  Q
    ||||||| ||| ||| |||||||||||||| | ||||||| |||||||||||| ||||||||||||||||||||||||||||  ||||       || |     
T  8140335 aggtaagtcatagttccttacatgcaacaatcaacttgtcctccatgcaaaactccaagtgtgcaacatgtcacttgcatctcttgcattttgcaacatg 8140434  T
Q  251 tcaatgcatgcaactatccactttgccaccttgcattacattgagaaatgcaatttgtcttacctgcatcatggacatgtgccttgttacaaaagtggct 350  Q
    | ||||  |||||  || ||| ||||||||||||||||||| ||| ||||||| ||||||| | |||| |||||||||||| |||| |||||||||||||    
T  8140435 ttaatgtgtgcaatcatgcacattgccaccttgcattacat-gagtaatgcaacttgtcttgcatgcaccatggacatgtgtcttgctacaaaagtggct 8140533  T
Q  351 ttaccaaacataatattgagtttggatcatcattt 385  Q
    ||||||| || ||||||| | |||||| |||||||    
T  8140534 ttaccaatcacaatattgggattggattatcattt 8140568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 174 - 398
Target Start/End: Original strand, 2323687 - 2323915
Alignment:
Q  174 cttacatgcaacaagccacttgtcttccatgcaaaacaccaagtgtgcaacatgtcacttgcatctaatgcaactta-------tcaatgcatgcaacta 266  Q
    |||||||||||||| |||||||| |||||| |||| | |||| |||||||| |||  ||||||||| ||||| |||        |||||| ||||||| |    
T  2323687 cttacatgcaacaa-ccacttgttttccatccaaa-ctccaaatgtgcaacttgttgcttgcatctcatgcatcttgcaacatgtcaatgtatgcaacca 2323784  T
Q  267 tccactttgccaccttgcattacattgagaaatgcaatttgtcttacctgcatcatggacatgtgccttgttacaaaagtggctttaccaaacataatat 366  Q
    |||||||||||||| |||||||| |  |||||||||| ||||||||| |||| ||||||||| || |||| ||||||||||||||||| || || ||||     
T  2323785 tccactttgccaccatgcattacgtc-agaaatgcaacttgtcttacatgcaccatggacatttgtcttgctacaaaagtggctttactaatcacaatag 2323883  T
Q  367 tgagtttggatcatcatttaggccaattccat 398  Q
    || | ||||||||||| || ||||||||||||    
T  2323884 tgggcttggatcatcacttgggccaattccat 2323915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 500 - 586
Target Start/End: Complemental strand, 19925397 - 19925311
Alignment:
Q  500 tccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcacc 586  Q
    ||||||||||||| ||||| | |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||    
T  19925397 tccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagtttcaaataggtcctttcagttgataaactatttcacc 19925311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 500 - 598
Target Start/End: Original strand, 28256558 - 28256656
Alignment:
Q  500 tccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccccctgt 598  Q
    ||||||||||||| ||||| |  |||||||||||||||| |||||||||||| |||||||| |||||||||||||||| ||||||| ||||||||||||    
T  28256558 tccttttagtttgacagaattctcaagttagtcctttaaatttcaaaagtttcaaataggttcttttagttgataaactatttcactgttaccccctgt 28256656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 498 - 592
Target Start/End: Complemental strand, 31176018 - 31175924
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacc 592  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| | ||| || |||||||    
T  31176018 ggtccttttagtttgacagaatttccaagttagtcctttaagtttcaaaagtttcaaagaggtccttttagttgataatctattccaacgttacc 31175924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 502 - 590
Target Start/End: Original strand, 10619867 - 10619955
Alignment:
Q  502 cttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgtta 590  Q
    ||||||||||| || || |  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  10619867 cttttagtttgacacaattgtcaagttagtcctttaagtttcaaaagtttcaaataggtccttttagttgataaactatttcaccgtta 10619955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 498 - 594
Target Start/End: Original strand, 35214870 - 35214966
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 594  Q
    ||||||||||||||| ||||| |  |||||||||| |||||||||||||| ||| ||||||||| ||||||||||||||| ||||||||||||||||    
T  35214870 ggtccttttagtttgacagaattctcaagttagtcttttaagtttcaaaaatttcaaataggtctttttagttgataaactatttcaccgttacccc 35214966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 500 - 594
Target Start/End: Original strand, 5559173 - 5559268
Alignment:
Q  500 tccttttagtttgtcagaaattccaagttagtccttt-aagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 594  Q
    |||||||||||||  | || | ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  5559173 tccttttagtttgataaaattcccaagttagtccttttaagtttcaaaagtttcaaataggtccttttagttgataaactatttcaccgttacccc 5559268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 524 - 591
Target Start/End: Complemental strand, 27995615 - 27995548
Alignment:
Q  524 aagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttac 591  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  27995615 aagttagtcctttaagtttcaaaagttttaaatagatccttttagttgataaactatttcaccgttac 27995548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 481 - 570
Target Start/End: Complemental strand, 31893614 - 31893525
Alignment:
Q  481 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||| || ||||||||||||||||||| ||||| ||| ||||||||||||||||||| |||||||| || |||||||||||||||    
T  31893614 ggtcaaatatcatttttggtccttttagtttgacagaatttctaagttagtcctttaagttttaaaagtttcaattaggtccttttagtt 31893525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 503 - 594
Target Start/End: Complemental strand, 1349208 - 1349114
Alignment:
Q  503 ttttagtttgtcagaaattccaagtta---gtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 594  Q
    |||||||||| ||||| |||||| |||   |||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||    
T  1349208 ttttagtttgacagaatttccaacttataagtcctttaagtttcaaaagtttcaaataggtcattttagttgataaaccatttcaccgttacccc 1349114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 502 - 590
Target Start/End: Complemental strand, 39959251 - 39959163
Alignment:
Q  502 cttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgtta 590  Q
    ||||||||||| ||||| |||||||||| || |||||||||||||||||| |||||||| |||||| ||||||||| ||||||||||||    
T  39959251 cttttagtttgacagaatttccaagttaatcatttaagtttcaaaagtttcaaataggttcttttacttgataaactatttcaccgtta 39959163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 159 - 234
Target Start/End: Original strand, 5102951 - 5103026
Alignment:
Q  159 ggtaagccattgtttcttacatgcaacaagccacttgtcttccatgcaaaacaccaagtgtgcaacatgtcacttg 234  Q
    ||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||    
T  5102951 ggtaaaccattgtttcttgcatgcaacaagccacttgtctttcatgcaaaacaccaaatgtgtaacatgtcacttg 5103026  T

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Target: chr7; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 500 - 586
Target Start/End: Complemental strand, 4187749 - 4187663
Alignment:
Q  500 tccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcacc 586  Q
    |||||||| |||| ||||| || |||||||||||||||| ||| |||||||||||||||||| ||||||||||||||| ||||||||    
T  4187749 tccttttaatttgacagaattttcaagttagtcctttaaattttaaaagttttaaataggtcattttagttgataaactatttcacc 4187663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 495 - 593
Target Start/End: Complemental strand, 33235616 - 33235518
Alignment:
Q  495 tttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccc 593  Q
    |||||||||||||||||| || || |  |||||||||||||||||||||||||  || ||||||||| ||||||||||||||| ||||||| |||||||    
T  33235616 tttggtccttttagtttgacaaaattatcaagttagtcctttaagtttcaaaaacttcaaataggtcattttagttgataaactatttcactgttaccc 33235518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 481 - 567
Target Start/End: Complemental strand, 33879654 - 33879568
Alignment:
Q  481 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtcctttta 567  Q
    |||||||||||| ||||||||||||||||||| ||||| |  ||||||||||||||||||||| ||||||| || ||||||||||||    
T  33879654 ggtcaaataccatttttggtccttttagtttgacagaattcacaagttagtcctttaagtttcgaaagtttcaattaggtcctttta 33879568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 485 - 570
Target Start/End: Original strand, 5805028 - 5805113
Alignment:
Q  485 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||||||| ||||||||||||||| ||||| |  ||||||||||||||||||||| ||||||| || |||||||||||||||    
T  5805028 aaataccactttcggtccttttagtttgacagaattctcaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtt 5805113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 498 - 583
Target Start/End: Original strand, 5805101 - 5805186
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttc 583  Q
    ||||||||||||||| ||||| |  |||| || |||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  5805101 ggtccttttagtttgacagaattctcaagctattcctttaagtttcaaaagttttaactaggtccttttagttgataaactatttc 5805186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 498 - 594
Target Start/End: Original strand, 33235097 - 33235193
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 594  Q
    ||||||||| ||||| ||||| | ||||||||| ||||||| |||||||||||| ||| ||||| ||||||||||||||| |||||| |||||||||    
T  33235097 ggtccttttggtttgacagaattcccaagttagacctttaaatttcaaaagtttcaaagaggtcattttagttgataaactatttcatcgttacccc 33235193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 498 - 570
Target Start/End: Complemental strand, 33879577 - 33879505
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||||| |||| ||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  33879577 ggtccttttaatttgacagaatttccaagttaatcctttaagtttcaaaagtttcaaataggtccttttagtt 33879505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 479 - 570
Target Start/End: Complemental strand, 1441573 - 1441482
Alignment:
Q  479 ttggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||||| |||||||||||||||||||||| || || | |||||||||||||||| ||||| ||||||| || |||||| ||||||||    
T  1441573 ttggtcaaatatcacttttggtccttttagtttgacataattcccaagttagtcctttaggtttcgaaagtttcaattaggtcattttagtt 1441482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 484 - 570
Target Start/End: Original strand, 5559096 - 5559183
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcc-tttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||||| ||||||||||||| |||| ||||| | |||||||||||| |||||||||||||||||| |||||| |||||||||||    
T  5559096 caaataccacgtttggtccttttaatttgacagaattcccaagttagtccttttaagtttcaaaagtttcaaatagatccttttagtt 5559183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 484 - 570
Target Start/End: Complemental strand, 5559752 - 5559667
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||||||||||||||||||||||| || || | |||||||||||||||||||||  ||||||| || |||||||||||||||    
T  5559752 caaataccacttttggtccttttagtttgacaaaattcccaagttagtcctttaagttt-taaagtttcaattaggtccttttagtt 5559667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 536 - 594
Target Start/End: Original strand, 8039747 - 8039805
Alignment:
Q  536 taagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 594  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  8039747 taagtttcaaaagtttcaaataggtccttttagttgataaactatttcaccgttacccc 8039805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 484 - 570
Target Start/End: Complemental strand, 20366673 - 20366587
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||||| ||||||||||||||||   ||||| ||||||||||||||||||||||||||||||||  || || |||||||||||    
T  20366673 caaataccacatttggtccttttagttaaacagaatttccaagttagtcctttaagtttcaaaagtttccaaaagatccttttagtt 20366587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 500 - 570
Target Start/End: Original strand, 21412931 - 21413001
Alignment:
Q  500 tccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||| || ||||||||    
T  21412931 tccttttagtttgacagaattttcaagttagtcctttaagtttcaaaagttttaaatagatcattttagtt 21413001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 494 - 592
Target Start/End: Original strand, 28104296 - 28104394
Alignment:
Q  494 ttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacc 592  Q
    ||||||||||||||||||| || || |  |||| ||||| |||||||||||||||||||||||| ||| ||||||||||||||  ||||||| ||||||    
T  28104296 ttttggtccttttagtttggcataattcacaaggtagtcatttaagtttcaaaagttttaaatatgtctttttagttgataaattatttcactgttacc 28104394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 481 - 570
Target Start/End: Original strand, 8039649 - 8039738
Alignment:
Q  481 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||||||||||| |||||||||||||| || || |  ||||||||| ||||||||||| ||||||| || |||||||||||||||    
T  8039649 ggtcaaataccactttttgtccttttagtttgacataattctcaagttagttctttaagtttcgaaagtttcaattaggtccttttagtt 8039738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 502 - 593
Target Start/End: Complemental strand, 23679587 - 23679497
Alignment:
Q  502 cttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccc 593  Q
    ||||||||||| ||||| |  |||||||||| |||||||||||||||||| |||||| |  ||||||||||||||| |||||||||||||||    
T  23679587 cttttagtttgacagaattctcaagttagtc-tttaagtttcaaaagtttaaaatagattattttagttgataaactatttcaccgttaccc 23679497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 485 - 570
Target Start/End: Complemental strand, 19925472 - 19925387
Alignment:
Q  485 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||||||||||| ||||||||||| || || | |||| ||||||||||||||| | |||||||||| ||| |||||||||||    
T  19925472 aaataccacttttggttcttttagtttgacaaaattcccaacttagtcctttaagttgcgaaagttttaattagatccttttagtt 19925387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 523 - 588
Target Start/End: Original strand, 20101909 - 20101974
Alignment:
Q  523 caagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgt 588  Q
    |||||||||||||||||||| ||||||||||||||| | || ||||||||||||| ||||||||||    
T  20101909 caagttagtcctttaagttttaaaagttttaaatagattctcttagttgataaactatttcaccgt 20101974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 500 - 576
Target Start/End: Complemental strand, 20366597 - 20366521
Alignment:
Q  500 tccttttagtttgtcagaaattc-caagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaa 576  Q
    ||||||||||||| || |||||| ||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||    
T  20366597 tccttttagtttgaca-aaattcgcaagttagtcctttaggtttcaaaagtttcaaatatgtccttttagttgataaa 20366521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 524 - 585
Target Start/End: Original strand, 34951316 - 34951377
Alignment:
Q  524 aagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcac 585  Q
    |||||||||||||||||||||||||||| ||||| ||| ||||||||||||||| |||||||    
T  34951316 aagttagtcctttaagtttcaaaagtttcaaataagtcattttagttgataaactatttcac 34951377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 485 - 546
Target Start/End: Complemental strand, 36566587 - 36566526
Alignment:
Q  485 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaa 546  Q
    |||||||||||||||||| ||||||||| ||||| ||||||||||||| |||||||||||||    
T  36566587 aaataccacttttggtccctttagtttgacagaatttccaagttagtcttttaagtttcaaa 36566526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 522 - 594
Target Start/End: Original strand, 20183856 - 20183928
Alignment:
Q  522 ccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 594  Q
    |||||||||||||||||||||||||| ||| ||||| ||| ||||||||||||||  ||||||| ||||||||    
T  20183856 ccaagttagtcctttaagtttcaaaaatttcaaataagtcattttagttgataaattatttcactgttacccc 20183928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 527 - 594
Target Start/End: Complemental strand, 1286836 - 1286770
Alignment:
Q  527 ttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 594  Q
    |||||||||||||||| |||||||||||||| || |||||||||||||||  ||||||||||||||||    
T  1286836 ttagtcctttaagttttaaaagttttaaatatgt-cttttagttgataaattatttcaccgttacccc 1286770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 501 - 588
Target Start/End: Complemental strand, 21413167 - 21413081
Alignment:
Q  501 ccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgt 588  Q
    ||||||| |||| ||||| ||| ||||||||  |||||||||||||||||| |||||||||||||||||| |||||| | ||||||||    
T  21413167 ccttttaatttgacagaatttctaagttagtt-tttaagtttcaaaagtttcaaataggtccttttagttcataaactacttcaccgt 21413081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 498 - 576
Target Start/End: Original strand, 1286433 - 1286511
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaa 576  Q
    |||||||||||||||  |||| |   ||||||||| |||||||||||||||||| |||||||| |||||||||||||||    
T  1286433 ggtccttttagtttgagagaattctaaagttagtcttttaagtttcaaaagtttcaaataggttcttttagttgataaa 1286511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 500 - 583
Target Start/End: Original strand, 1346545 - 1346624
Alignment:
Q  500 tccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttc 583  Q
    ||||||||||||| || || |||||||||||||||||||||||||||||||| ||    || |||||||||||||||| |||||    
T  1346545 tccttttagtttgacataatttccaagttagtcctttaagtttcaaaagtttcaa----gttcttttagttgataaactatttc 1346624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 484 - 570
Target Start/End: Original strand, 19925094 - 19925180
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||| | |||||||| |||||||||| ||||| |||||||||| ||||| ||||||| ||||||| || ||| |||||||||||    
T  19925094 caaatactatttttggtctttttagtttgacagaatttccaagttactccttcaagtttcgaaagtttcaattagatccttttagtt 19925180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 484 - 570
Target Start/End: Complemental strand, 34951597 - 34951511
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||| | |||||||| |||||||||| ||||| |  ||||||||||||||||||||| ||||||| || ||| |||||||||||    
T  34951597 caaatactatttttggtctttttagtttgacagaattatcaagttagtcctttaagtttcgaaagtttcaattagatccttttagtt 34951511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 499 - 572
Target Start/End: Complemental strand, 5805654 - 5805581
Alignment:
Q  499 gtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttga 572  Q
    |||||||||||||| | ||| || ||||||| || |||||||||||||||||| ||||||||| ||||||||||    
T  5805654 gtccttttagtttgactgaattttcaagttaatcttttaagtttcaaaagtttcaaataggtcattttagttga 5805581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 523 - 584
Target Start/End: Complemental strand, 6220411 - 6220351
Alignment:
Q  523 caagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttca 584  Q
    |||||||||| ||||||||||||||||||| ||||||| |||||||||||||||| ||||||    
T  6220411 caagttagtc-tttaagtttcaaaagttttcaataggttcttttagttgataaactatttca 6220351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 16698347 - 16698400
Alignment:
Q  401 aaattgctcttctcccatttggttttgctcattccccttttacttttgtgccta 454  Q
    ||||||||||||||||||||| |||||||||||||||| || ||||||||||||    
T  16698347 aaattgctcttctcccatttgtttttgctcattcccctcttccttttgtgccta 16698400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 17672583 - 17672636
Alignment:
Q  401 aaattgctcttctcccatttggttttgctcattccccttttacttttgtgccta 454  Q
    ||||||||||||||||||||| |||||||||||||||| || ||||||||||||    
T  17672583 aaattgctcttctcccatttgtttttgctcattcccctcttccttttgtgccta 17672636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 482 - 570
Target Start/End: Original strand, 21433131 - 21433219
Alignment:
Q  482 gtcaaataccacttttggtccttttagtttgtcagaaattc-caagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||| |||||||| ||||||||||||| || |||||| ||||||||||||||||||||| || |||| || || ||||||||||||    
T  21433131 gtcaaatatcacttttgatccttttagtttgaca-aaattcacaagttagtcctttaagtttcgaatgtttcaattaagtccttttagtt 21433219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 481 - 570
Target Start/End: Complemental strand, 29591194 - 29591106
Alignment:
Q  481 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||||||||||||| || | ||||||||  | || |  |||||||||||||||||||||||||||||||| |||||| ||||||||    
T  29591194 ggtcaaataccacttttg-tcttattagtttgatataattatcaagttagtcctttaagtttcaaaagttttaattaggtcattttagtt 29591106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 494 - 570
Target Start/End: Original strand, 35214805 - 35214882
Alignment:
Q  494 ttttggtccttttagtttgtcagaaattccaagttagtccttt-aagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||| ||||||||||||| ||||| ||| |||||||| |||| ||||||||||||||| || |||||||||||||||    
T  35214805 ttttgatccttttagtttgacagaatttctaagttagttcttttaagtttcaaaagtttcaattaggtccttttagtt 35214882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 481 - 570
Target Start/End: Original strand, 40904678 - 40904766
Alignment:
Q  481 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||||||||||| ||||||||| ||||| || || |  |||||||||| ||||||||| |||||||| || |||||||||||||||    
T  40904678 ggtcaaataccacttt-ggtccttttggtttgacataattctcaagttagtcttttaagttttaaaagtttcaattaggtccttttagtt 40904766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 481 - 570
Target Start/End: Complemental strand, 41020261 - 41020173
Alignment:
Q  481 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||||||| ||||| ||||||||||||| || || ||||||||||||  |||||||||  |||||||||| ||| |||||||||||    
T  41020261 ggtcaaataccatttttgatccttttagtttgacataatttccaagttagt-ttttaagttttgaaagttttaattagatccttttagtt 41020173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 499 - 595
Target Start/End: Original strand, 20366112 - 20366207
Alignment:
Q  499 gtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccccc 595  Q
    |||||||||||||| ||||| |||  ||| | ||| |||  |||||| ||||| ||||||||| ||||||||||||||| |||||||||||||||||    
T  20366112 gtccttttagtttgacagaa-ttctcagtcaatcccttatatttcaagagtttcaaataggtctttttagttgataaactatttcaccgttaccccc 20366207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 482 - 570
Target Start/End: Original strand, 28256480 - 28256568
Alignment:
Q  482 gtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||| ||  |||| ||||||||||||| ||||| | |||||||| | |||||| |||||||||||||||| || |||||||||||    
T  28256480 gtcaaatatcatatttgatccttttagtttgacagaattcccaagttacttctttaaatttcaaaagttttaaagagatccttttagtt 28256568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 482 - 570
Target Start/End: Original strand, 36566265 - 36566353
Alignment:
Q  482 gtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||||||| |||||||||||||||||| ||||| |   ||||||||| |||||||||  ||||||| || |||||| ||||||||    
T  36566265 gtcaaataccacgtttggtccttttagtttgacagaattcttaagttagtcatttaagttttgaaagtttcaattaggtcattttagtt 36566353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 484 - 551
Target Start/End: Original strand, 1440995 - 1441062
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttt 551  Q
    |||||||||| |||| ||||||||||||| ||||| | ||||||||||  ||||||||||||||||||    
T  1440995 caaataccacatttgatccttttagtttgacagaattcccaagttagtattttaagtttcaaaagttt 1441062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 479 - 570
Target Start/End: Original strand, 20366033 - 20366123
Alignment:
Q  479 ttggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||| |||||| || ||||||||||||||||||  ||||| |  ||||||||||||||||||||| ||||||| || || ||||||||||||    
T  20366033 ttggccaaatatcatttttggtccttttagttta-cagaattctcaagttagtcctttaagtttcgaaagtttcaattatgtccttttagtt 20366123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 499 - 570
Target Start/End: Original strand, 21433208 - 21433279
Alignment:
Q  499 gtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||||||||  |||| | ||||||||||| |||||||||||||||||| ||||| || |||||||||    
T  21433208 gtccttttagtttgaaagaattcccaagttagtcatttaagtttcaaaagtttcaaataagttcttttagtt 21433279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 523 - 594
Target Start/End: Original strand, 27995149 - 27995220
Alignment:
Q  523 caagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 594  Q
    ||||||| ||||||||||||||||||| | ||||| ||  ||||||||||||||| ||||||| ||||||||    
T  27995149 caagttaatcctttaagtttcaaaagtatcaaataagtaattttagttgataaactatttcactgttacccc 27995220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 534 - 593
Target Start/End: Original strand, 29590711 - 29590770
Alignment:
Q  534 tttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccc 593  Q
    |||||||||||||||||||||||| ||| ||||||||| ||| | |||||||||||||||    
T  29590711 tttaagtttcaaaagttttaaatatgtcattttagttggtaagctatttcaccgttaccc 29590770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 484 - 570
Target Start/End: Original strand, 31893239 - 31893325
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||| ||||||| ||||||||||| ||||| |  |||||||||  |||||||||| ||||||| || |||||| ||||||||    
T  31893239 caaataccatttttggttcttttagtttgacagaattctcaagttagttttttaagtttcgaaagtttcaattaggtcattttagtt 31893325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 503 - 593
Target Start/End: Complemental strand, 35215380 - 35215290
Alignment:
Q  503 ttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccc 593  Q
    ||||| |||| ||||| |||||| |||||| ||||||||| |||||||| |||||  || ||||||||||||||| ||||||  |||||||    
T  35215380 ttttaatttgacagaatttccaaattagtcttttaagttttaaaagtttcaaataactcattttagttgataaactatttcattgttaccc 35215290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 484 - 570
Target Start/End: Complemental strand, 39959329 - 39959243
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||||| |||||||||||||||||| ||||| ||  || |||||| ||||| ||| |||||||| |||||| | |||||||||    
T  39959329 caaataccacgtttggtccttttagtttgacagaatttttaaattagtcatttaaatttgaaaagtttcaaatagattcttttagtt 39959243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 485 - 570
Target Start/End: Original strand, 1286360 - 1286445
Alignment:
Q  485 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||| ||||||| ||||||||||||||  |||| || ||| |||||  ||||| |||||||||||| || |||||||||||||||    
T  1286360 aaatatcacttttcgtccttttagtttgatagaattttcaaattagttttttaaatttcaaaagtttcaattaggtccttttagtt 1286445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 495 - 568
Target Start/End: Complemental strand, 8040270 - 8040197
Alignment:
Q  495 tttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttag 568  Q
    |||||||||||||||||  | ||| |||||| |||||| |||||||||||||| ||| |||||| |||||||||    
T  8040270 tttggtccttttagtttaacggaatttccaaattagtcttttaagtttcaaaaatttcaaatagatccttttag 8040197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 502 - 570
Target Start/End: Complemental strand, 1349269 - 1349201
Alignment:
Q  502 cttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||||| || || ||| ||||||||| ||||||||||||||||||||||||  || ||||||||    
T  1349269 cttttagtttgacataatttctaagttagtcttttaagtttcaaaagttttaaataaatcattttagtt 1349201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 546 - 594
Target Start/End: Complemental strand, 1441455 - 1441407
Alignment:
Q  546 aagttttaaataggtccttttagttgataaacaatttcaccgttacccc 594  Q
    |||||| ||||||||||||||||||||||||| ||||||| ||||||||    
T  1441455 aagtttcaaataggtccttttagttgataaactatttcactgttacccc 1441407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 498 - 546
Target Start/End: Complemental strand, 5559679 - 5559631
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaa 546  Q
    ||||||||||||||| ||||| | |||||||||||||||||||||||||    
T  5559679 ggtccttttagtttgacagaattcccaagttagtcctttaagtttcaaa 5559631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 546 - 594
Target Start/End: Complemental strand, 8040169 - 8040121
Alignment:
Q  546 aagttttaaataggtccttttagttgataaacaatttcaccgttacccc 594  Q
    |||||| ||||||||||||||||||||| ||| ||||||||||||||||    
T  8040169 aagtttcaaataggtccttttagttgatgaactatttcaccgttacccc 8040121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 546 - 594
Target Start/End: Original strand, 39958789 - 39958837
Alignment:
Q  546 aagttttaaataggtccttttagttgataaacaatttcaccgttacccc 594  Q
    |||||| ||||||||||||||||||||||||| |||||||| |||||||    
T  39958789 aagtttcaaataggtccttttagttgataaactatttcaccattacccc 39958837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 527 - 586
Target Start/End: Original strand, 23150731 - 23150790
Alignment:
Q  527 ttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcacc 586  Q
    |||||| |||||||||||||||||| |||||  || ||||||||||||||| ||||||||    
T  23150731 ttagtcttttaagtttcaaaagtttcaaataaatcattttagttgataaactatttcacc 23150790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 484 - 567
Target Start/End: Original strand, 27995050 - 27995133
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtcctttta 567  Q
    |||||| ||| |||||||||||||||||| ||||| |  |||||||||  |||||||||||||| ||| |||||| || |||||    
T  27995050 caaatatcacgtttggtccttttagtttgacagaattctcaagttagtgttttaagtttcaaaaatttgaaatagatcatttta 27995133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 498 - 593
Target Start/End: Original strand, 42990563 - 42990658
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccc 593  Q
    |||| |||||||| | ||||| || ||||||| |  ||||||||| ||||||||||| || ||| |||||||||||| || |||| ||||||||||    
T  42990563 ggtcattttagttcgacagaattttcaagttaattttttaagttttaaaagttttaattatgtcattttagttgatacactattttaccgttaccc 42990658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 484 - 570
Target Start/End: Complemental strand, 5805728 - 5805643
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||| || |||||||||||||||||| || |||||  ||||||||| |||||||||  ||||||| || || ||||||||||||    
T  5805728 caaatactacctttggtccttttagtttgaca-aaattttaagttagtcatttaagttttgaaagtttcaattatgtccttttagtt 5805643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 86 - 135
Target Start/End: Original strand, 16183902 - 16183954
Alignment:
Q  86 tttcatctcactctcaacaagctctaattc---ttgttgtgttactacttgat 135  Q
    |||| |||||||||||||||||||||||||   ||||||||||||||||||||    
T  16183902 tttcctctcactctcaacaagctctaattcttgttgttgtgttactacttgat 16183954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 500 - 570
Target Start/End: Original strand, 19925170 - 19925239
Alignment:
Q  500 tccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||||||| || || |||||| ||||||||||||||||||||| | | ||||||| ||||||||||    
T  19925170 tccttttagtttgacacaatttccaa-ttagtcctttaagtttcaaaaatatcaaataggaccttttagtt 19925239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 503 - 557
Target Start/End: Complemental strand, 21433391 - 21433337
Alignment:
Q  503 ttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaata 557  Q
    |||||||||| ||||| | |||||||| ||||||||||||||||||||| |||||    
T  21433391 ttttagtttgacagaattcccaagttaatcctttaagtttcaaaagtttcaaata 21433337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 485 - 570
Target Start/End: Complemental strand, 22876987 - 22876903
Alignment:
Q  485 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||||||||| ||||||||||||| || || |||||||||| |  |||||||||| ||||||| || || ||| ||||||||    
T  22876987 aaataccacttttgatccttttagtttgacataatttccaagttaat-ttttaagtttcgaaagtttcaattaagtcattttagtt 22876903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 485 - 566
Target Start/End: Original strand, 33235024 - 33235105
Alignment:
Q  485 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtcctttt 566  Q
    ||||| |||||||| || |||||||||| ||||| |  ||||||| |||||||| ||| |||||||| || |||||||||||    
T  33235024 aaatatcacttttgttcattttagtttgacagaattctcaagttaatcctttaaattttaaaagtttcaattaggtcctttt 33235105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 498 - 567
Target Start/End: Original strand, 40904754 - 40904823
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtcctttta 567  Q
    ||||||||||||||| || || || ||| |||||| ||||||||| |||||||| |||||| ||||||||    
T  40904754 ggtccttttagtttgacataattttcaaattagtcatttaagttttaaaagtttcaaatagatcctttta 40904823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 549 - 594
Target Start/End: Complemental strand, 42991028 - 42990983
Alignment:
Q  549 ttttaaataggtccttttagttgataaacaatttcaccgttacccc 594  Q
    ||||||||||||| ||||||||||||||| ||||||||||| ||||    
T  42991028 ttttaaataggtctttttagttgataaactatttcaccgtttcccc 42990983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 86 - 135
Target Start/End: Original strand, 2323557 - 2323608
Alignment:
Q  86 tttcatctcactctcaacaagctctaa--ttcttgttgtgttactacttgat 135  Q
    |||| ||||||||||||||||||||||  || ||||||||||||||||||||    
T  2323557 tttcctctcactctcaacaagctctaatcttattgttgtgttactacttgat 2323608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 498 - 546
Target Start/End: Complemental strand, 31893537 - 31893489
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaa 546  Q
    ||||||||||||||| ||||| |  ||||||||||||||||||||||||    
T  31893537 ggtccttttagtttgacagaattctcaagttagtcctttaagtttcaaa 31893489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 402 - 479
Target Start/End: Original strand, 38453022 - 38453100
Alignment:
Q  402 aattgctcttctcccatttggttttgctcattccccttttacttttgtgcctat--gagctaactcacgctgaaaaatgt 479  Q
    ||||||||||||||| ||||||||||||| ||| || ||| |||||||||||||  |||  |||||||| ||||||||||    
T  38453022 aattgctcttctcccttttggttttgctccttctcc-tttgcttttgtgcctatgggagtcaactcacgttgaaaaatgt 38453100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 491 - 570
Target Start/End: Original strand, 1346476 - 1346555
Alignment:
Q  491 cacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||| ||||||||||||| ||||| |   |||||||| ||||||||||| ||||||| || ||  |||||||||||    
T  1346476 cacttttgatccttttagtttgacagaattcttaagttagtgctttaagtttcgaaagtttcaattaaatccttttagtt 1346555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 539 - 570
Target Start/End: Original strand, 33879440 - 33879471
Alignment:
Q  539 gtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||||||||||||||||||||||||||    
T  33879440 gtttcaaaagttttaaataggtccttttagtt 33879471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 402 - 436
Target Start/End: Original strand, 3756377 - 3756411
Alignment:
Q  402 aattgctcttctcccatttggttttgctcattccc 436  Q
    |||||||||||||||||||| ||||||||||||||    
T  3756377 aattgctcttctcccatttgtttttgctcattccc 3756411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 500 - 570
Target Start/End: Complemental strand, 34951521 - 34951451
Alignment:
Q  500 tccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||||||| || || ||| || | ||||||||||||||||||||| | ||||| | ||||||||||    
T  34951521 tccttttagtttgacacaatttctaaatcagtcctttaagtttcaaaagtataaaatatgaccttttagtt 34951451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 501 - 546
Target Start/End: Complemental strand, 10620284 - 10620239
Alignment:
Q  501 ccttttagtttgtcagaaattccaagttagtcctttaagtttcaaa 546  Q
    |||||||||||  ||||| |||||||| ||||||||||||||||||    
T  10620284 ccttttagtttaacagaatttccaagtaagtcctttaagtttcaaa 10620239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 501 - 542
Target Start/End: Original strand, 19925230 - 19925271
Alignment:
Q  501 ccttttagtttgtcagaaattccaagttagtcctttaagttt 542  Q
    |||||||||||  ||||| |||||||||||||||||||||||    
T  19925230 ccttttagtttaacagaatttccaagttagtcctttaagttt 19925271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 485 - 570
Target Start/End: Original strand, 20101813 - 20101897
Alignment:
Q  485 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||| ||||| || |||||||||| | ||| | ||||||||||  |||||||||| ||||||| || ||| |||||||||||    
T  20101813 aaataccatttttgatcattttagtttgactgaattcccaagttagtt-tttaagtttcgaaagtttcaattagatccttttagtt 20101897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 485 - 570
Target Start/End: Original strand, 21412856 - 21412941
Alignment:
Q  485 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||| || |||| |||||||||||||| ||||| |   |||||| ||||||||||||  ||||||| || ||| |||||||||||    
T  21412856 aaatatcatttttagtccttttagtttgacagaattcttaagttaatcctttaagttttgaaagtttcaattagatccttttagtt 21412941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 523 - 556
Target Start/End: Original strand, 21413014 - 21413047
Alignment:
Q  523 caagttagtcctttaagtttcaaaagttttaaat 556  Q
    |||||||||| |||||||||||||||||||||||    
T  21413014 caagttagtcttttaagtttcaaaagttttaaat 21413047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 547
Target Start/End: Complemental strand, 31893485 - 31893437
Alignment:
Q  499 gtccttttagtttgtcagaaattc-caagttagtcctttaagtttcaaaa 547  Q
    |||||||||||||| || |||||| |||||||||||||||||||||||||    
T  31893485 gtccttttagtttgaca-aaattctcaagttagtcctttaagtttcaaaa 31893437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 485 - 570
Target Start/End: Original strand, 39958677 - 39958762
Alignment:
Q  485 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||| || ||||||||||||||||||| || || ||  ||||||||| ||||||| || ||||||| || || ||| ||||||||    
T  39958677 aaatatcatttttggtccttttagtttgacataatttttaagttagtcatttaagtctcgaaagtttcaattaagtcattttagtt 39958762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 539 - 567
Target Start/End: Complemental strand, 21413076 - 21413048
Alignment:
Q  539 gtttcaaaagttttaaataggtcctttta 567  Q
    |||||||||||||||||||||||||||||    
T  21413076 gtttcaaaagttttaaataggtcctttta 21413048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #96
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 531 - 567
Target Start/End: Complemental strand, 29591083 - 29591047
Alignment:
Q  531 tcctttaagtttcaaaagttttaaataggtcctttta 567  Q
    ||||||||||||||||||||||||||| ||| |||||    
T  29591083 tcctttaagtttcaaaagttttaaataagtcatttta 29591047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #97
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 484 - 512
Target Start/End: Complemental strand, 31176085 - 31176057
Alignment:
Q  484 caaataccacttttggtccttttagtttg 512  Q
    |||||||||||||||||||||||||||||    
T  31176085 caaataccacttttggtccttttagtttg 31176057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #98
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 530 - 570
Target Start/End: Original strand, 35600078 - 35600118
Alignment:
Q  530 gtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||||||||||||||| | ||||| ||||||||||||    
T  35600078 gtcctttaagtttcaaaagtctcaaataagtccttttagtt 35600118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #99
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 391 - 427
Target Start/End: Original strand, 41909246 - 41909282
Alignment:
Q  391 aattccatgaaaattgctcttctcccatttggttttg 427  Q
    |||| |||||||||||||||||||||||||| |||||    
T  41909246 aatttcatgaaaattgctcttctcccatttgtttttg 41909282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #100
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 530 - 570
Target Start/End: Complemental strand, 42889034 - 42888994
Alignment:
Q  530 gtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||||||||||||||||| ||||| ||| ||||||||    
T  42889034 gtcctttaagtttcaaaagtttcaaataagtcattttagtt 42888994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374 (Bit Score: 74; Significance: 1e-33; HSPs: 2)
Name: scaffold0374
Description:

Target: scaffold0374; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 481 - 594
Target Start/End: Original strand, 16159 - 16272
Alignment:
Q  481 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaat 580  Q
    ||||||||| | ||||||||||||||||||||  | || |||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||| ||    
T  16159 ggtcaaatatctcttttggtccttttagtttgataaaatttccaaattagtcctttaagtttaaaaagttttaaataggtcattttagttgataaactat 16258  T
Q  581 ttcaccgttacccc 594  Q
    ||||||||||||||    
T  16259 ttcaccgttacccc 16272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 481 - 590
Target Start/End: Complemental strand, 16684 - 16576
Alignment:
Q  481 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaat 580  Q
    ||||||||| | ||||||||| |||| |||||  | || |||||||||| |||||||||||| |||||||||||||| ||| ||||||||||||||| ||    
T  16684 ggtcaaatatctcttttggtcttttt-gtttgataaaatttccaagttaatcctttaagtttaaaaagttttaaataagtcattttagttgataaactat 16586  T
Q  581 ttcaccgtta 590  Q
    ||||| ||||    
T  16585 ttcacagtta 16576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 1e-33; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 498 - 595
Target Start/End: Complemental strand, 36418461 - 36418364
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccccc 595  Q
    ||||||||||||||| || || || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  36418461 ggtccttttagtttgacataattttcaagttagtcctttaagtttcaaaagtttcaaataggtccttttagttgataaactatttcaccgttaccccc 36418364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 481 - 593
Target Start/End: Original strand, 32459413 - 32459525
Alignment:
Q  481 ggtcaaataccacttttggtccttttagtttgtcagaaattc-caagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaa 579  Q
    ||||||||| || ||||||||||||||||||| || |||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |    
T  32459413 ggtcaaatagcagttttggtccttttagtttgaca-aaattcacaagttagtcatttaagtttcaaaagttttaaataggtcattttagttgataaacta 32459511  T
Q  580 tttcaccgttaccc 593  Q
    |||||| |||||||    
T  32459512 tttcactgttaccc 32459525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 485 - 570
Target Start/End: Original strand, 6336133 - 6336218
Alignment:
Q  485 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||| ||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6336133 aaataccattttcggtccttttagtttggcagaatttccaagttagtcctttaagtttcaaaagttttaaataggtcattttagtt 6336218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 479 - 570
Target Start/End: Original strand, 18951287 - 18951378
Alignment:
Q  479 ttggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||| |||||| ||| |||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18951287 ttggccaaataacacatttggtccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagttttaaatagatccttttagtt 18951378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 485 - 591
Target Start/End: Complemental strand, 18238412 - 18238306
Alignment:
Q  485 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttca 584  Q
    ||||||| |||||| || ||| |||||| || || ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||  ||||||    
T  18238412 aaatacctcttttgatcttttaagtttgacaaaatttccaagttagtcgtttaagtttcaaaagttttaaataggtcattttagttgataaattatttca 18238313  T
Q  585 ccgttac 591  Q
    |||||||    
T  18238312 ccgttac 18238306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 481 - 570
Target Start/End: Original strand, 20728514 - 20728603
Alignment:
Q  481 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||| |||| || || |||||||||||||||    
T  20728514 ggtcaaataccacttttggtctttttagtttgacagaatttccaagttagtcctttaagtttcgaaagattcaattaggtccttttagtt 20728603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 500 - 593
Target Start/End: Complemental strand, 20729103 - 20729010
Alignment:
Q  500 tccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccc 593  Q
    ||||||||||||| ||||| || |||||||||||||||| ||| |||||||| ||||||||||||||||||||||||| |||||||| ||||||    
T  20729103 tccttttagtttgacagaattttcaagttagtcctttaaattttaaaagtttcaaataggtccttttagttgataaactatttcaccattaccc 20729010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 499 - 594
Target Start/End: Original strand, 18249022 - 18249117
Alignment:
Q  499 gtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 594  Q
    |||||||||||||  ||||| |  |||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||    
T  18249022 gtccttttagtttaacagaattctcaagttagtcatttaagtttcaaaagttttaaataggtctttttagttgataaactatttcatcgttacccc 18249117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 485 - 594
Target Start/End: Complemental strand, 35891335 - 35891226
Alignment:
Q  485 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttca 584  Q
    |||||| ||||||| ||||||||||||| || || || ||||||||||||||||||||||||||||| ||||| ||  |||| |||||||||| ||||||    
T  35891335 aaatacaacttttgatccttttagtttgacataattttcaagttagtcctttaagtttcaaaagtttcaaataagttttttttgttgataaactatttca 35891236  T
Q  585 ccgttacccc 594  Q
     |||||||||    
T  35891235 gcgttacccc 35891226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 499 - 594
Target Start/End: Complemental strand, 5735040 - 5734946
Alignment:
Q  499 gtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 594  Q
    |||||||||||||  ||||| |  ||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||| |||||||| |||||||    
T  5735040 gtccttttagtttaacagaattctcaagttagtcctttaagtt-caaaagtttcaaataggtcattttagttgataaactatttcaccattacccc 5734946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 502 - 593
Target Start/End: Original strand, 18237919 - 18238010
Alignment:
Q  502 cttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccc 593  Q
    ||||||||||| ||||| ||  |||||| |||||||||||| |||||||||||||| ||||||||||||||||||  ||||||| |||||||    
T  18237919 cttttagtttgacagaatttttaagttaatcctttaagttttaaaagttttaaataagtccttttagttgataaaatatttcactgttaccc 18238010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 498 - 593
Target Start/End: Original strand, 20728591 - 20728686
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccc 593  Q
    ||||||||||||||  ||||| |  |||||||||||||||||||| |||||||| ||||| ||| |||||||||| |||| |||||||||||||||    
T  20728591 ggtccttttagtttaacagaattctcaagttagtcctttaagttttaaaagtttcaaatatgtctttttagttgaaaaactatttcaccgttaccc 20728686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 484 - 594
Target Start/End: Complemental strand, 26276074 - 26275973
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttc 583  Q
    ||||||||||||||| ||||||||||||| || || ||||||||||||||||||||||||         ||||| ||||||||||||||||| | |||||    
T  26276074 caaataccacttttgatccttttagtttgacaaaatttccaagttagtcctttaagtttc---------aaatatgtccttttagttgataagctatttc 26275984  T
Q  584 accgttacccc 594  Q
    |||||||||||    
T  26275983 accgttacccc 26275973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 485 - 592
Target Start/End: Complemental strand, 32459929 - 32459822
Alignment:
Q  485 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttca 584  Q
    ||||||||||||| |||||||| ||||| | ||| |  ||| |||||| ||||||||| |||| ||| ||||||||||||||||| ||||||| ||||||    
T  32459929 aaataccacttttagtccttttcgtttgaccgaattctcaaattagtcttttaagttttaaaaatttcaaataggtccttttagtcgataaactatttca 32459830  T
Q  585 ccgttacc 592  Q
    | ||||||    
T  32459829 ctgttacc 32459822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 502 - 588
Target Start/End: Complemental strand, 6336384 - 6336298
Alignment:
Q  502 cttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgt 588  Q
    |||||| |||||||||| | | ||||||||||||||| ||||||| |||| ||||| ||||||| ||||||||||| ||||||||||    
T  6336384 cttttaatttgtcagaattcctaagttagtcctttaaatttcaaatgtttcaaatatgtcctttcagttgataaactatttcaccgt 6336298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 485 - 570
Target Start/End: Original strand, 26275494 - 26275579
Alignment:
Q  485 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||| ||| |||||| ||||||||||| ||||| ||| |||||||| ||||||||||||||||||| |||||| || ||||||||    
T  26275494 aaatatcacgtttggtacttttagtttgacagaatttctaagttagttctttaagtttcaaaagtttcaaatagatcattttagtt 26275579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 481 - 546
Target Start/End: Complemental strand, 31814020 - 31813955
Alignment:
Q  481 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaa 546  Q
    ||||||||||||| |||||||||||||||||| ||||| | ||||||||||| |||||||||||||    
T  31814020 ggtcaaataccacgtttggtccttttagtttgacagaattcccaagttagtcatttaagtttcaaa 31813955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 484 - 570
Target Start/End: Original strand, 1722489 - 1722575
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattc-caagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||||  |||||||||||||||||  || |||||| |||||||||||||||| ||||||||||||||||||| | |||||||||    
T  1722489 caaataccatgtttggtccttttagtttaaca-aaattcacaagttagtcctttaattttcaaaagttttaaatagattcttttagtt 1722575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 500 - 594
Target Start/End: Complemental strand, 1723034 - 1722940
Alignment:
Q  500 tccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 594  Q
    ||||||||||||  || || ||| ||||||||  ||||||||| ||||||||||||||  || ||||||||||||||| ||||||| ||||||||    
T  1723034 tccttttagtttaacaaaatttctaagttagtgttttaagttttaaaagttttaaatatatcattttagttgataaactatttcactgttacccc 1722940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 527 - 589
Target Start/End: Original strand, 13543179 - 13543241
Alignment:
Q  527 ttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgtt 589  Q
    ||||||||||||||||||||||||| ||||| ||| ||||||||||||||  |||||||||||    
T  13543179 ttagtcctttaagtttcaaaagtttcaaatatgtcattttagttgataaattatttcaccgtt 13543241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 484 - 570
Target Start/End: Original strand, 14235557 - 14235643
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||| || |||||||||||||||||||  | || ||  ||||||||||||||||||  ||||||||||| |||||||||||||||    
T  14235557 caaatatcatttttggtccttttagtttgaaataatttttaagttagtcctttaagttctaaaagttttaattaggtccttttagtt 14235643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 500 - 570
Target Start/End: Original strand, 18951368 - 18951438
Alignment:
Q  500 tccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||||||||  |||| |  |||||||||||||||||||| |||||||||||||||||| ||||||||    
T  18951368 tccttttagtttgatagaattctcaagttagtcctttaagttttaaaagttttaaataggtcattttagtt 18951438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 481 - 570
Target Start/End: Original strand, 18248944 - 18249033
Alignment:
Q  481 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||||||||||||||||||||||||||  |||| ||  |||||| || |||| ||||  |||||||||| || ||||||||||||    
T  18248944 ggtcaaataccacttttggtccttttagtttgatagaatttttaagttaatcttttacgttttgaaagttttaactatgtccttttagtt 18249033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 524 - 592
Target Start/End: Complemental strand, 13543637 - 13543569
Alignment:
Q  524 aagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacc 592  Q
    |||||| |||||||| |||||||||||| |||||||| |||||| ||||||||| ||||||| ||||||    
T  13543637 aagttaatcctttaaatttcaaaagtttcaaataggttcttttacttgataaactatttcactgttacc 13543569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 531 - 594
Target Start/End: Original strand, 5734558 - 5734621
Alignment:
Q  531 tcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 594  Q
    |||||||||||| |||||||| ||||| ||| |||||||| |||||| ||||||||||||||||    
T  5734558 tcctttaagttttaaaagtttcaaataagtcattttagttaataaactatttcaccgttacccc 5734621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 479 - 570
Target Start/End: Original strand, 13538453 - 13538544
Alignment:
Q  479 ttggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||| |||| |||||||||||||||||||||||| || || | | |||||||||||||| ||||| ||||||| || ||||||  |||||||    
T  13538453 ttggccaaagaccacttttggtccttttagtttgacataattcctaagttagtcctttacgtttcgaaagtttcaattaggtctgtttagtt 13538544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 479 - 570
Target Start/End: Original strand, 13543068 - 13543159
Alignment:
Q  479 ttggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||| |||| |||||||||||||||||||||||| || || | | |||||| | ||||||||||| ||||||| || |||||| ||||||||    
T  13543068 ttggccaaagaccacttttggtccttttagtttgacataattcctaagttaattctttaagtttcgaaagtttcaattaggtctttttagtt 13543159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 527 - 594
Target Start/End: Original strand, 30737832 - 30737899
Alignment:
Q  527 ttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 594  Q
    |||||| |||||||||||||||||||||||| ||| ||| |||||||||||  ||| |||||||||||    
T  30737832 ttagtcttttaagtttcaaaagttttaaataagtcatttaagttgataaactgttttaccgttacccc 30737899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 523 - 570
Target Start/End: Original strand, 32660287 - 32660334
Alignment:
Q  523 caagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  32660287 caagttagtcctttaagtttcaaaagtttcaaataggtcattttagtt 32660334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 495 - 570
Target Start/End: Complemental strand, 36418524 - 36418449
Alignment:
Q  495 tttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||| |||||||||| || || |  ||||||||||||||| ||||||||||||| || |||||||||||||||    
T  36418524 tttggtctttttagtttgacataattctcaagttagtcctttacgtttcaaaagtttcaattaggtccttttagtt 36418449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 498 - 593
Target Start/End: Complemental strand, 30738320 - 30738223
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagt--tgataaacaatttcaccgttaccc 593  Q
    |||| ||||| |||| ||||| |  |||||| |||||||| ||||||||||||| ||||| ||| |||||||  |||||||| |||||||||||||||    
T  30738320 ggtcattttaatttgacagaattctcaagtttgtcctttatgtttcaaaagtttcaaatatgtcattttagttgtgataaactatttcaccgttaccc 30738223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 480 - 570
Target Start/End: Complemental strand, 38405674 - 38405584
Alignment:
Q  480 tggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||||||| ||||| ||||||||||||  ||||| | |||||||| || |||||||||| ||||||| || || ||| ||||||||    
T  38405674 tggtcaaataccatttttgatccttttagtttcacagaattcccaagttaatcatttaagtttcgaaagtttcaattatgtcattttagtt 38405584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 498 - 551
Target Start/End: Original strand, 6336206 - 6336259
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttt 551  Q
    |||| ||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  6336206 ggtcattttagtttgaaagaatttccaagttagtcctttaagtttcaaaagttt 6336259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 481 - 570
Target Start/End: Original strand, 35189900 - 35189988
Alignment:
Q  481 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||| ||||||| ||| ||||| ||||  |||| |  |||||||||| |||||||||| ||||||||||||||||| ||||||||    
T  35189900 ggtcaaatatcacttttagtcattttaatttgatagaattctcaagttagtc-tttaagtttcgaaagttttaaataggtcattttagtt 35189988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 485 - 570
Target Start/End: Complemental strand, 35190546 - 35190461
Alignment:
Q  485 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||| ||| ||||||||||||| |||| ||||| || ||||||| | ||||||||||  ||||||| || |||||||||||||||    
T  35190546 aaatatcacgtttggtccttttaatttgacagaattttcaagttacttctttaagttttgaaagtttcaattaggtccttttagtt 35190461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 479 - 570
Target Start/End: Complemental strand, 5735120 - 5735029
Alignment:
Q  479 ttggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||||| ||||| ||||||||||||||||   ||| |  |||||||||| ||||| |||| ||| |||||| || ||||||||||||    
T  5735120 ttggtcaaatatcacttatggtccttttagtttgatcgaattctcaagttagtcatttaaatttcgaaaattttaattatgtccttttagtt 5735029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 483 - 570
Target Start/End: Original strand, 19278693 - 19278779
Alignment:
Q  483 tcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||| |||||||| ||||||||||||| ||||| |   ||||||||||||||| |||||||| |||||| ||| | |||||||||    
T  19278693 tcaaatatcacttttgatccttttagtttgacagaattcttaagttagtcctttaaatttcaaaa-ttttaattagcttcttttagtt 19278779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 483 - 566
Target Start/End: Original strand, 36417874 - 36417957
Alignment:
Q  483 tcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtcctttt 566  Q
    |||||| ||||||||| ||||||||||||  ||||| |  |||||||||||||||| |||| ||||||| || ||||| |||||    
T  36417874 tcaaatgccacttttgatccttttagtttaacagaattctcaagttagtcctttaaatttcgaaagtttcaattaggttctttt 36417957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 576
Target Start/End: Original strand, 1722567 - 1722641
Alignment:
Q  502 cttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaa 576  Q
    ||||||||||| || || |  ||||||| ||||||||||||||||||||| ||||| ||| |||||||| |||||    
T  1722567 cttttagtttgacataattctcaagttaatcctttaagtttcaaaagtttcaaatatgtcattttagtttataaa 1722641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 546 - 588
Target Start/End: Complemental strand, 38405560 - 38405518
Alignment:
Q  546 aagttttaaataggtccttttagttgataaacaatttcaccgt 588  Q
    |||||||||||| ||||||||||||||||||| ||||||||||    
T  38405560 aagttttaaatatgtccttttagttgataaactatttcaccgt 38405518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 537 - 594
Target Start/End: Complemental strand, 19279244 - 19279187
Alignment:
Q  537 aagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 594  Q
    ||||||||||||||| |||||||||||||||||| |||| | ||||||  ||||||||    
T  19279244 aagtttcaaaagtttcaaataggtccttttagttaataagctatttcagagttacccc 19279187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 498 - 551
Target Start/End: Original strand, 32660322 - 32660375
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttt 551  Q
    |||| |||||||||| ||||| | | ||||||||||||||||||||||||||||    
T  32660322 ggtcattttagtttgacagaattcctaagttagtcctttaagtttcaaaagttt 32660375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 498 - 547
Target Start/End: Original strand, 35189976 - 35190025
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaa 547  Q
    |||| |||||||||| ||||| | ||||||||||||||||||||||||||    
T  35189976 ggtcattttagtttgacagaactcccaagttagtcctttaagtttcaaaa 35190025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 522 - 570
Target Start/End: Original strand, 9919230 - 9919278
Alignment:
Q  522 ccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||| |||||||||||||||||||| | ||||| ||||||||||||    
T  9919230 ccaagttggtcctttaagtttcaaaagtctcaaataagtccttttagtt 9919278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 546 - 594
Target Start/End: Original strand, 13538575 - 13538623
Alignment:
Q  546 aagttttaaataggtccttttagttgataaacaatttcaccgttacccc 594  Q
    |||||| ||||| ||| ||||||||||||||| ||||||||||||||||    
T  13538575 aagtttcaaatatgtcattttagttgataaactatttcaccgttacccc 13538623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 530 - 570
Target Start/End: Complemental strand, 35342365 - 35342325
Alignment:
Q  530 gtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||||||||||||||||| ||||| ||||||||||||    
T  35342365 gtcctttaagtttcaaaagtttcaaataagtccttttagtt 35342325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 502 - 593
Target Start/End: Original strand, 19278771 - 19278862
Alignment:
Q  502 cttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccc 593  Q
    ||||||||||| ||||| |  |||||||   ||||||||||||| | ||| |||||  || ||||||||||||||| ||||||| |||||||    
T  19278771 cttttagtttgacagaattctcaagttacctctttaagtttcaataatttcaaataaatcattttagttgataaactatttcactgttaccc 19278862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 491 - 570
Target Start/End: Original strand, 32660195 - 32660274
Alignment:
Q  491 cacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||||| |||||||||  || || ||| |||||| ||||||||||||| ||||||| || || || |||||||||    
T  32660195 cacttttggtctttttagttttacataatttctaagttaatcctttaagtttcgaaagtttcaattatgttcttttagtt 32660274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 402 - 436
Target Start/End: Original strand, 9828182 - 9828216
Alignment:
Q  402 aattgctcttctcccatttggttttgctcattccc 436  Q
    ||||||||||||||||| |||||||||||||||||    
T  9828182 aattgctcttctcccatctggttttgctcattccc 9828216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 484 - 570
Target Start/End: Complemental strand, 13543737 - 13543651
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||||||||  || |||||||||| ||||| |  ||| |||||  ||||| ||||||||||||| || || |||||||||||    
T  13543737 caaataccacttttactctttttagtttgacagaattctcaaattagttttttaaatttcaaaagtttttaacagatccttttagtt 13543651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 546 - 592
Target Start/End: Original strand, 36417988 - 36418034
Alignment:
Q  546 aagttttaaataggtccttttagttgataaacaatttcaccgttacc 592  Q
    |||||| ||||||||||||||||||||||||  ||||||| ||||||    
T  36417988 aagtttcaaataggtccttttagttgataaattatttcactgttacc 36418034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 522 - 570
Target Start/End: Complemental strand, 9919798 - 9919750
Alignment:
Q  522 ccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||| ||||||||||||||||||||   ||||| ||||||||||||    
T  9919798 ccaagttggtcctttaagtttcaaaagtcccaaataagtccttttagtt 9919750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 402 - 434
Target Start/End: Original strand, 35446954 - 35446986
Alignment:
Q  402 aattgctcttctcccatttggttttgctcattc 434  Q
    |||||||||||||||||||| ||||||||||||    
T  35446954 aattgctcttctcccatttgtttttgctcattc 35446986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 549 - 585
Target Start/End: Original strand, 38082661 - 38082697
Alignment:
Q  549 ttttaaataggtccttttagttgataaacaatttcac 585  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  38082661 ttttaaataggtcattttagttgataaactatttcac 38082697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 5e-33; HSPs: 71)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 498 - 594
Target Start/End: Complemental strand, 30576730 - 30576634
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 594  Q
    ||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||    
T  30576730 ggtccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagttttaaatatgtcattttagttgataaactatttcaccgttacccc 30576634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 481 - 591
Target Start/End: Complemental strand, 34686985 - 34686875
Alignment:
Q  481 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaat 580  Q
    ||||||||| ||||| ||||||||||| |||| ||||| |  |||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||    
T  34686985 ggtcaaatatcacttatggtccttttaatttgacagaattatcaagttagtcctttaaattttaaaagttttaaataggtccttttagttgataaactat 34686886  T
Q  581 ttcaccgttac 591  Q
    |||||||||||    
T  34686885 ttcaccgttac 34686875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 485 - 594
Target Start/End: Original strand, 5358632 - 5358741
Alignment:
Q  485 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttca 584  Q
    ||||||| |||||  ||||||||||||| ||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||     
T  5358632 aaatacctcttttaatccttttagtttgacagaattttcaagttagtccttcaagtttcaaaagttttaaataggtccttttagttgataaactatttcg 5358731  T
Q  585 ccgttacccc 594  Q
    | ||||||||    
T  5358732 ctgttacccc 5358741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 500 - 593
Target Start/End: Complemental strand, 9277052 - 9276960
Alignment:
Q  500 tccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccc 593  Q
    |||||||||||||  |||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||    
T  9277052 tccttttagtttgatagaatttccaagttagtcctttaagtttcaaaagtttcaaataggt-cttttagttgataaactatttcaccgttaccc 9276960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 484 - 592
Target Start/End: Complemental strand, 13771951 - 13771843
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttc 583  Q
    ||||||||| |||||||| |||||||||| || || | |||||||||||||||||||||||||||||| ||||| ||| ||||| ||||||||| |||||    
T  13771951 caaataccatttttggtcattttagtttgacataattcccaagttagtcctttaagtttcaaaagtttcaaatatgtcattttatttgataaaccatttc 13771852  T
Q  584 accgttacc 592  Q
    || ||||||    
T  13771851 actgttacc 13771843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 503 - 586
Target Start/End: Complemental strand, 9770851 - 9770768
Alignment:
Q  503 ttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcacc 586  Q
    |||||||||| ||||| | ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||    
T  9770851 ttttagtttgacagaattcccaagttagtcctttaattttcaaaagtttcaaataggtccttttagttgataaactatttcacc 9770768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 498 - 588
Target Start/End: Complemental strand, 29794328 - 29794238
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgt 588  Q
    ||||||||||||||| || || ||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||  ||||||||||    
T  29794328 ggtccttttagtttgacataatttccaagttagtcttttaagtttcaaaagtttcaaatagatccttttagttgataaattatttcaccgt 29794238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 484 - 593
Target Start/End: Original strand, 35433885 - 35433994
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttc 583  Q
    |||||||| ||||||||||||||| ||||  |||| |  |||||||||| ||||||||||||||||||||||||| || ||||||||||||||  |||||    
T  35433885 caaatacctcttttggtccttttaatttgatagaattcacaagttagtcatttaagtttcaaaagttttaaatagatctttttagttgataaattatttc 35433984  T
Q  584 accgttaccc 593  Q
    || |||||||    
T  35433985 actgttaccc 35433994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 499 - 594
Target Start/End: Original strand, 39700948 - 39701043
Alignment:
Q  499 gtccttttagtttgtcagaaattcc-aagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 594  Q
    |||||||||||||| || ||||||| |||||| ||||||||||||||||||||| ||||| ||| ||||||||||||||| ||||||||||||||||    
T  39700948 gtccttttagtttgaca-aaattcctaagttaatcctttaagtttcaaaagtttcaaatatgtcattttagttgataaactatttcaccgttacccc 39701043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 484 - 570
Target Start/End: Original strand, 25737092 - 25737178
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||||  |||||||||||||||||| || || || ||||||||||||||||||||||||||||| |||||| |||||||||||    
T  25737092 caaataccatatttggtccttttagtttgacataattttcaagttagtcctttaagtttcaaaagtttcaaatagatccttttagtt 25737178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 499 - 585
Target Start/End: Original strand, 30576215 - 30576301
Alignment:
Q  499 gtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcac 585  Q
    |||||||||||||| ||||| ||||||||||||| ||||||||| |||||||| |||| |||| ||||||||||||||| |||||||    
T  30576215 gtccttttagtttgccagaatttccaagttagtcttttaagtttgaaaagtttcaaattggtctttttagttgataaactatttcac 30576301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 481 - 586
Target Start/End: Original strand, 13771403 - 13771508
Alignment:
Q  481 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaat 580  Q
    ||||||||||| |||||  || |||||||||| ||||| || |||||||||| ||||||||| |||||||| |||||| | |||||||||||||||| ||    
T  13771403 ggtcaaatacctcttttaatctttttagtttgacagaattttcaagttagtcatttaagttttaaaagtttcaaatagattcttttagttgataaactat 13771502  T
Q  581 ttcacc 586  Q
    ||||||    
T  13771503 ttcacc 13771508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 498 - 594
Target Start/End: Original strand, 23553417 - 23553513
Alignment:
Q  498 ggtccttttagtttgtcagaaattc-caagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 594  Q
    ||||||||||||||| || |||||| |||||| ||| ||||| |||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||    
T  23553417 ggtccttttagtttgaca-aaattctcaagttggtcttttaaatttcaaaagtttcaaataggtcattttagttgataaactatttcaccgttacccc 23553513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 485 - 570
Target Start/End: Original strand, 36359890 - 36359975
Alignment:
Q  485 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||| || |||||  ||||||||    
T  36359890 aaataccactcttggtccttttagtttgacagaatttccaagttagtcctttaagtttcgaaagtttcaattaggtatttttagtt 36359975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 503 - 588
Target Start/End: Original strand, 36359968 - 36360053
Alignment:
Q  503 ttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgt 588  Q
    |||||||||| ||||| | ||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||| |||| |||||    
T  36359968 ttttagtttgacagaattcccaagttagtcctttaagttttaaaagtttcaaataggtcattttagttgataaactattttaccgt 36360053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 481 - 590
Target Start/End: Original strand, 44040809 - 44040916
Alignment:
Q  481 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaat 580  Q
    ||||||||| || ||||||||||||||||||  ||||| || ||| |||| | |||||||||||||||||||||||||||| ||||||||||||||| ||    
T  44040809 ggtcaaatatca-ttttggtccttttagtttaacagaatttacaaattag-cttttaagtttcaaaagttttaaataggtcattttagttgataaactat 44040906  T
Q  581 ttcaccgtta 590  Q
    ||||| ||||    
T  44040907 ttcactgtta 44040916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 485 - 570
Target Start/End: Complemental strand, 45018062 - 45017977
Alignment:
Q  485 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||||||| |||||||||||||| || ||  | ||||||||||||||||||||| |||||||||| |||||||||||||||    
T  45018062 aaataccacttttagtccttttagtttgacaaaatcttcaagttagtcctttaagtttcgaaagttttaattaggtccttttagtt 45017977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 481 - 585
Target Start/End: Complemental strand, 35434417 - 35434313
Alignment:
Q  481 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaat 580  Q
    |||||||| | | ||||||||||||||||||| || || | | |||||| ||||||||||||||||||||| ||||| ||| ||||||||||||||| ||    
T  35434417 ggtcaaatgctatttttggtccttttagtttgacataattcctaagttaatcctttaagtttcaaaagtttcaaatatgtcattttagttgataaactat 35434318  T
Q  581 ttcac 585  Q
    |||||    
T  35434317 ttcac 35434313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 484 - 570
Target Start/End: Complemental strand, 39701537 - 39701451
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||||| |||||||||||||||||| ||||| |  ||||||||| ||||||||||||||||||| || || ||||||||||||    
T  39701537 caaataccacgtttggtccttttagtttgacagaattctcaagttagttctttaagtttcaaaagtttcaattaagtccttttagtt 39701451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 499 - 587
Target Start/End: Original strand, 4613803 - 4613891
Alignment:
Q  499 gtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccg 587  Q
    |||||||||||||| || || || | ||||||||||||||||||||||||||| |||||| | ||||||||| |||||| |||||||||    
T  4613803 gtccttttagtttgacaaaattttcgagttagtcctttaagtttcaaaagtttcaaatagattcttttagtttataaactatttcaccg 4613891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 499 - 591
Target Start/End: Original strand, 16197092 - 16197184
Alignment:
Q  499 gtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttac 591  Q
    |||||||||||||| ||||| | |||||||| || |||||||||||||||| | |||||||||||||||||| |||||  |||||||| ||||    
T  16197092 gtccttttagtttgacagaattcccaagttaatcatttaagtttcaaaagtatcaaataggtccttttagttaataaattatttcaccattac 16197184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 498 - 594
Target Start/End: Complemental strand, 25730193 - 25730097
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 594  Q
    |||| ||||| |||| ||||| |  |||||||||||||||| |||||||||||| ||||| ||| ||||||||||||||| ||||||| ||||||||    
T  25730193 ggtcattttaatttgacagaattctcaagttagtcctttaaatttcaaaagtttcaaatatgtcattttagttgataaactatttcactgttacccc 25730097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 484 - 570
Target Start/End: Complemental strand, 9770930 - 9770844
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattc-caagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||| ||||||| || || ||| ||||||||    
T  9770930 caaataccacttttggtccttttagtttgaca-aaattctcaagttagtcctttaagtttcgaaagtttcaattaagtcattttagtt 9770844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 479 - 570
Target Start/End: Complemental strand, 36314796 - 36314705
Alignment:
Q  479 ttggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||||||||||||||||||||||||||||| || || |  |||||||||| ||||| |||| ||||||| || || ||||||||||||    
T  36314796 ttggtcaaataccacttttggtccttttagtttgacaaaattatcaagttagtcttttaaatttcgaaagtttcaattatgtccttttagtt 36314705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 484 - 567
Target Start/End: Complemental strand, 36360219 - 36360136
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtcctttta 567  Q
    ||||||||| |||||||| |||||||||| ||||| ||||||||||||| |||||||||| ||||||| ||||| ||| |||||    
T  36360219 caaataccaattttggtcattttagtttgacagaatttccaagttagtcttttaagtttcgaaagtttcaaataagtcttttta 36360136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 499 - 594
Target Start/End: Complemental strand, 39701462 - 39701367
Alignment:
Q  499 gtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 594  Q
    ||||||||||||||  |||| | |||  |||||| |||||||||||||| ||| ||||||||||||||||||||||||| | ||||| ||||||||    
T  39701462 gtccttttagtttgatagaattcccagattagtcatttaagtttcaaaactttcaaataggtccttttagttgataaactacttcactgttacccc 39701367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 479 - 570
Target Start/End: Original strand, 45017730 - 45017821
Alignment:
Q  479 ttggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||| ||||||| |||||||||||||||||||||  |||| | |||||||||||||||||||||| ||||||| || || ||| ||||||||    
T  45017730 ttggccaaatactacttttggtccttttagtttgatagaattcccaagttagtcctttaagtttcgaaagtttcaattatgtcattttagtt 45017821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 485 - 551
Target Start/End: Original strand, 8713835 - 8713901
Alignment:
Q  485 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttt 551  Q
    |||||||||||||||||||||||||||| || || |  |||||||||||||||||||||||||||||    
T  8713835 aaataccacttttggtccttttagtttgacataattctcaagttagtcctttaagtttcaaaagttt 8713901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 502 - 592
Target Start/End: Complemental strand, 8714420 - 8714330
Alignment:
Q  502 cttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacc 592  Q
    |||||||||||  |||| |  |||||||||  |||||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||    
T  8714420 cttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacc 8714330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 506 - 592
Target Start/End: Original strand, 9276553 - 9276639
Alignment:
Q  506 tagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacc 592  Q
    ||||||| ||||| |  ||||||||||  |||||||| |||||||| ||||||||||||||||||||||||| ||||||| ||||||    
T  9276553 tagtttgacagaattctcaagttagtcagttaagttttaaaagtttcaaataggtccttttagttgataaactatttcactgttacc 9276639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 484 - 570
Target Start/End: Complemental strand, 29794402 - 29794316
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||| || |||||||| |||||||||| ||||| | ||||||||||||||||| |||| |||||||| | |||||||||||||||    
T  29794402 caaatatcatttttggtcattttagtttgacagaattcccaagttagtcctttaaatttcgaaagttttcattaggtccttttagtt 29794316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 499 - 593
Target Start/End: Complemental strand, 44041357 - 44041263
Alignment:
Q  499 gtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccc 593  Q
    |||||||||||||| ||||| | | ||||||||| || ||||||||||| ||| ||||| ||| ||||||||||||||| |||||||| ||||||    
T  44041357 gtccttttagtttgacagaattcctaagttagtctttaaagtttcaaaaatttcaaataagtcattttagttgataaactatttcaccattaccc 44041263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 523 - 584
Target Start/End: Complemental strand, 16208735 - 16208674
Alignment:
Q  523 caagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttca 584  Q
    |||||||||||||| |||||||||||||| ||||| ||||||||||||||||||| ||||||    
T  16208735 caagttagtcctttgagtttcaaaagtttcaaatatgtccttttagttgataaactatttca 16208674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 485 - 570
Target Start/End: Complemental strand, 30576803 - 30576718
Alignment:
Q  485 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||| || |||| ||||||||||||| ||||| || |||||||||| | |||||||||||||||| || |||||||||||||||    
T  30576803 aaatactacgtttgatccttttagtttgacagaattttcaagttagtcttctaagtttcaaaagtttcaattaggtccttttagtt 30576718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 498 - 594
Target Start/End: Complemental strand, 25737679 - 25737583
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 594  Q
    |||| ||||| |||| ||||| |  |||||||||||||||| |||||||||||| |||||  || ||||||||||||||| ||||||| ||||||||    
T  25737679 ggtctttttaatttgacagaattctcaagttagtcctttaaatttcaaaagtttcaaatatttcattttagttgataaactatttcactgttacccc 25737583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 495 - 570
Target Start/End: Complemental strand, 8714487 - 8714412
Alignment:
Q  495 tttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||| |||||||||||||  |||| |||||||||||||||||||| ||||||||||| |||||| | |||||||||    
T  8714487 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtt 8714412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 479 - 570
Target Start/End: Original strand, 16197012 - 16197103
Alignment:
Q  479 ttggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||| ||||||| ||||||||||||||| ||||| ||||| |  ||||||||||| ||||||||| ||||||| || || ||||||||||||    
T  16197012 ttggccaaatactacttttggtccttttcgtttgacagaattatcaagttagtccattaagtttcgaaagtttcaattatgtccttttagtt 16197103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 503 - 593
Target Start/End: Complemental strand, 31169550 - 31169460
Alignment:
Q  503 ttttagtttgtcagaaattc-caagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccc 593  Q
    |||||||||| | ||||||| ||| |||||||||||||||| |||||||| ||||| ||| ||||||||||||||  |||||||||||||||    
T  31169550 ttttagtttgac-gaaattctcaaattagtcctttaagttttaaaagtttcaaatatgtcattttagttgataaaatatttcaccgttaccc 31169460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 484 - 545
Target Start/End: Original strand, 23179036 - 23179096
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaa 545  Q
    ||||||||| ||||||||||||||||||| ||||| | ||||||||||||||||||||||||    
T  23179036 caaatacca-ttttggtccttttagtttgacagaattcccaagttagtcctttaagtttcaa 23179096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 481 - 570
Target Start/End: Complemental strand, 29030265 - 29030176
Alignment:
Q  481 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||||||||||||||| |||||||||| || || | |  ||||| ||||||||||||| ||||||| || || ||||||||||||    
T  29030265 ggtcaaataccacttttggtcattttagtttgacataattccttagttattcctttaagtttcgaaagtttcaattaagtccttttagtt 29030176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 502 - 593
Target Start/End: Original strand, 8713912 - 8714003
Alignment:
Q  502 cttttagtttgtcagaaattc-caagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccc 593  Q
    ||||||||||| || |||||| |||||||||| |||||||||||||| ||| |||||| || ||||||||||||||   ||||||||||||||    
T  8713912 cttttagtttgaca-aaattcacaagttagtcttttaagtttcaaaaatttcaaatagatcattttagttgataaattgtttcaccgttaccc 8714003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 498 - 546
Target Start/End: Original strand, 11113613 - 11113661
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaa 546  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  11113613 ggtccttttagtttgacagaatttccaagttagtcctttaagtttcaaa 11113661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 498 - 570
Target Start/End: Complemental strand, 40553369 - 40553297
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||||||||| || || ||| ||||||||| |||||||||||||||||| || | |||||||||||||    
T  40553369 ggtccttttagtttgacaaaatttctaagttagtcttttaagtttcaaaagtttcaatttggtccttttagtt 40553297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 522 - 570
Target Start/End: Original strand, 43422944 - 43422992
Alignment:
Q  522 ccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  43422944 ccaagttagtcctttaagtttcaaaagtttcaaataggtcattttagtt 43422992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 484 - 570
Target Start/End: Complemental strand, 14871493 - 14871406
Alignment:
Q  484 caaataccactttt-ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||||||||| |||||||| |||||| ||||| | | ||||||||| |||||||||| ||||||| || ||||| |||||||||    
T  14871493 caaataccactttttggtcctttaagtttgacagaattcctaagttagtcttttaagtttcgaaagtttcaattaggttcttttagtt 14871406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 500 - 591
Target Start/End: Original strand, 25737168 - 25737259
Alignment:
Q  500 tccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttac 591  Q
    ||||||||||||| | ||| | | ||||||||||||||| |||||||||||| | ||| ||| ||||| ||||||||| |||||| ||||||    
T  25737168 tccttttagtttgaccgaattcctaagttagtcctttaaatttcaaaagtttcacatatgtcattttacttgataaactatttcatcgttac 25737259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 481 - 567
Target Start/End: Complemental strand, 6236376 - 6236290
Alignment:
Q  481 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtcctttta 567  Q
    ||||||||| |||||| ||||||||||||||  || || | |||||||| | ||||||||||||| ||||| || ||||||||||||    
T  6236376 ggtcaaatatcactttcggtccttttagttttacaaaattcccaagttatttctttaagtttcaatagtttcaattaggtcctttta 6236290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 484 - 570
Target Start/End: Complemental strand, 29792662 - 29792576
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||| |||| |||||||||||||| ||||| | |||| |||||||||||| |||| |||||||  | ||| |||||||||||    
T  29792662 caaataccatttttagtccttttagtttgacagaattcccaaattagtcctttaaatttcgaaagtttctattagatccttttagtt 29792576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 484 - 570
Target Start/End: Original strand, 30576140 - 30576226
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||| ||||||||||| |||||| ||| ||||| | ||||||||||||||||| |||  ||||||| || || ||||||||||||    
T  30576140 caaatatcacttttggtctttttagcttgacagaattcccaagttagtcctttaaattttgaaagtttcaattaagtccttttagtt 30576226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 481 - 570
Target Start/End: Original strand, 23553340 - 23553429
Alignment:
Q  481 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||||||  |||| ||||||||||||| ||||| |  ||| ||  ||||||||||||| ||||||| || |||||||||||||||    
T  23553340 ggtcaaataccatgtttgatccttttagtttgacagaattctcaacttgatcctttaagtttcgaaagtttcaattaggtccttttagtt 23553429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 503 - 588
Target Start/End: Original strand, 45017814 - 45017899
Alignment:
Q  503 ttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgt 588  Q
    |||||||||  ||||| | |||| ||||||||||||| ||||||| ||| ||||| ||| ||||| ||||||||| ||||||||||    
T  45017814 ttttagtttaacagaattcccaaattagtcctttaagattcaaaaatttcaaataagtcattttaattgataaactatttcaccgt 45017899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 494 - 570
Target Start/End: Complemental strand, 44041422 - 44041346
Alignment:
Q  494 ttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||| |||||||||||||| || || || ||||||||||||||||||||  ||||||| || || ||||||||||||    
T  44041422 tttttgtccttttagtttgacaaaattttcaagttagtcctttaagttttgaaagtttcaattatgtccttttagtt 44041346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 503 - 570
Target Start/End: Complemental strand, 9277109 - 9277042
Alignment:
Q  503 ttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||||| ||||| | ||||||||||| |||||||||| ||||||| || ||| |||||||||||    
T  9277109 ttttagtttgacagaattcccaagttagtcttttaagtttcgaaagtttcaattagatccttttagtt 9277042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 487 - 570
Target Start/End: Original strand, 9770552 - 9770635
Alignment:
Q  487 ataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||||||| ||||| ||| ||| ||||| | |||||||| || |||||||||| ||||||| || || ||||||||||||    
T  9770552 ataccacttttgctccttgtagattgacagaattcccaagttaatcatttaagtttcgaaagtttcaattaagtccttttagtt 9770635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 479 - 570
Target Start/End: Original strand, 11113534 - 11113625
Alignment:
Q  479 ttggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||| ||||||||||||| | ||||||||||||| || || | | ||||||||||||||| |||  ||||||| ||  ||||||||||||||    
T  11113534 ttggccaaataccactttagatccttttagtttgacataattcctaagttagtcctttaaattttgaaagtttcaatcaggtccttttagtt 11113625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 481 - 556
Target Start/End: Complemental strand, 25730271 - 25730196
Alignment:
Q  481 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaat 556  Q
    ||||||||| |||  ||| |||||||||||||  |||| |||||||||||||||||||||||  ||||||| ||||    
T  25730271 ggtcaaataacacaattgatccttttagtttgatagaatttccaagttagtcctttaagttttgaaagtttcaaat 25730196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 485 - 570
Target Start/End: Original strand, 4613729 - 4613814
Alignment:
Q  485 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||| ||| ||||||||||||||||||  |||| || ||||||| |||||||| |||  ||||||| || || ||||||||||||    
T  4613729 aaatatcacatttggtccttttagtttgaaagaattttcaagttaatcctttaaattttgaaagtttcaattaagtccttttagtt 4613814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 498 - 547
Target Start/End: Original strand, 9770674 - 9770723
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaa 547  Q
    ||||||||||||||| ||||| | | ||||||||||||||||||||||||    
T  9770674 ggtccttttagtttgacagaattccgaagttagtcctttaagtttcaaaa 9770723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 482 - 570
Target Start/End: Complemental strand, 31169630 - 31169543
Alignment:
Q  482 gtcaaataccacttttggtccttttagtttgtcagaaattc-caagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||| ||| ||||||| |||||||||| || |||||| ||||||||||||||||||||  ||||||| |||||| || ||||||||    
T  31169630 gtcaaatatcacgtttggtcattttagtttgaca-aaattctcaagttagtcctttaagttt-taaagtttcaaatagatcattttagtt 31169543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 498 - 570
Target Start/End: Original strand, 39700887 - 39700959
Alignment:
Q  498 ggtccttttagtttgtcagaaattcc-aagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||||||||| || ||||||  ||||||||||||||||||| |||||||| || || ||||||||||||    
T  39700887 ggtccttttagtttgaca-aaattcttaagttagtcctttaagttttaaaagtttcaattatgtccttttagtt 39700959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 524 - 592
Target Start/End: Original strand, 6235818 - 6235886
Alignment:
Q  524 aagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacc 592  Q
    |||||| |||||||| |||||||||||| ||||||    ||||||||||||||| |||||||| |||||    
T  6235818 aagttaatcctttaaatttcaaaagtttcaaatagactattttagttgataaactatttcacctttacc 6235886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 494 - 570
Target Start/End: Complemental strand, 40553433 - 40553357
Alignment:
Q  494 ttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||||||||||||| || || | | || |||||||||| ||||| |||||||| ||  ||||||||||||||    
T  40553433 ttttggtccttttagtttgacataattcctaacttagtcctttgagtttaaaaagtttcaatcaggtccttttagtt 40553357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 546 - 593
Target Start/End: Complemental strand, 14871378 - 14871331
Alignment:
Q  546 aagttttaaataggtccttttagttgataaacaatttcaccgttaccc 593  Q
    |||||| ||||||||||||||||||||||||| |||| | ||||||||    
T  14871378 aagtttcaaataggtccttttagttgataaactatttaatcgttaccc 14871331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 481 - 556
Target Start/End: Complemental strand, 25737757 - 25737682
Alignment:
Q  481 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaat 556  Q
    ||||||||| |||  ||| | |||||||||||  |||| |||||||||||||||||||||||  ||||||| ||||    
T  25737757 ggtcaaataacacaattgattcttttagtttgatagaatttccaagttagtcctttaagttttgaaagtttcaaat 25737682  T

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Target: chr8; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 534 - 585
Target Start/End: Original strand, 34686509 - 34686560
Alignment:
Q  534 tttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcac 585  Q
    ||||||||| ||||||||||||||| || |||||||||||| || |||||||    
T  34686509 tttaagttttaaaagttttaaatagatctttttagttgatagactatttcac 34686560  T

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Target: chr8; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 570
Target Start/End: Complemental strand, 43423130 - 43423091
Alignment:
Q  531 tcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||||||||||||||| ||||||||| ||||||||    
T  43423130 tcctttaagtttcaaaagtttcaaataggtcattttagtt 43423091  T

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Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 485 - 567
Target Start/End: Original strand, 43422847 - 43422929
Alignment:
Q  485 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtcctttta 567  Q
    |||||||||||||| | |||||||||||  | || |  ||| ||||||||||||||||  ||||||| || ||||||||||||    
T  43422847 aaataccacttttgattcttttagtttgatataattctcaaattagtcctttaagttttgaaagtttcaattaggtcctttta 43422929  T

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Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 481 - 551
Target Start/End: Complemental strand, 43423239 - 43423169
Alignment:
Q  481 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttt 551  Q
    |||||||| | ||||||||||||||||||||| || || | | ||||||||  |||||||||| |||||||    
T  43423239 ggtcaaatgctacttttggtccttttagtttgacataattcctaagttagttatttaagtttcgaaagttt 43423169  T

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Target: chr8; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 498 - 547
Target Start/End: Complemental strand, 45017989 - 45017942
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaa 547  Q
    ||||||||||||||| ||  | ||||||||||||||||||||||||||||    
T  45017989 ggtccttttagtttgaca--agttccaagttagtcctttaagtttcaaaa 45017942  T

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Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 522 - 551
Target Start/End: Complemental strand, 36360121 - 36360092
Alignment:
Q  522 ccaagttagtcctttaagtttcaaaagttt 551  Q
    ||||||||||||||||||||||||||||||    
T  36360121 ccaagttagtcctttaagtttcaaaagttt 36360092  T

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Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 498 - 546
Target Start/End: Original strand, 43422980 - 43423028
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaa 546  Q
    |||| |||||||||| || || ||||||||||||||||||| |||||||    
T  43422980 ggtcattttagtttgacaaaatttccaagttagtcctttaaatttcaaa 43423028  T

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Target: scaffold0019 (Bit Score: 62; Significance: 2e-26; HSPs: 3)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 481 - 570
Target Start/End: Original strand, 124129 - 124218
Alignment:
Q  481 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||||||||||||||||||||||||||| || || | |||||||||||||||||||||||||||||| ||| |||| |||||||||    
T  124129 ggtcaaataccacttttggtccttttagtttgacaaaattcccaagttagtcctttaagtttcaaaagtttcaaacaggtgcttttagtt 124218  T

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Target: scaffold0019; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 484 - 570
Target Start/End: Complemental strand, 124492 - 124406
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||||||||||||||||| |||||  | || | |||||||||||||||||||||| ||||||| || |||||||||||||||    
T  124492 caaataccacttttggtcctttttgtttgatataattcccaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtt 124406  T

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Target: scaffold0019; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 498 - 570
Target Start/End: Complemental strand, 124418 - 124346
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||| ||||||| || |||||| ||||||||    
T  124418 ggtccttttagtttgacagaatttccaagttagtcctttaagtttcgaaagtttcaattaggtctttttagtt 124346  T

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Target: scaffold0746 (Bit Score: 57; Significance: 2e-23; HSPs: 4)
Name: scaffold0746
Description:

Target: scaffold0746; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 498 - 594
Target Start/End: Complemental strand, 596 - 500
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 594  Q
    |||||||||| |||| ||||| |  |||||||||||||||| |||||||||||| ||||||||| ||||||||||||||| ||||||| ||||||||    
T  596 ggtccttttaatttgacagaattctcaagttagtcctttaaatttcaaaagtttcaaataggtcattttagttgataaactatttcactgttacccc 500  T

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Target: scaffold0746; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 485 - 570
Target Start/End: Original strand, 11 - 96
Alignment:
Q  485 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||| ||| |||||||||||||||||| || || |  ||||||||||||| |||||||||||||||||||||  |||||||||||    
T  11 aaatatcacatttggtccttttagtttgacataattctcaagttagtccttcaagtttcaaaagttttaaatatatccttttagtt 96  T

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Target: scaffold0746; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 481 - 567
Target Start/End: Complemental strand, 673 - 587
Alignment:
Q  481 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtcctttta 567  Q
    |||||||||||||  |||||||||||| ||||  |||| || ||||||||||||||||||||  ||||||| || ||||||||||||    
T  673 ggtcaaataccacaattggtccttttaatttgatagaattttcaagttagtcctttaagttttgaaagtttcaattaggtcctttta 587  T

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Target: scaffold0746; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 500 - 591
Target Start/End: Original strand, 86 - 176
Alignment:
Q  500 tccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttac 591  Q
    ||||||||||||| | ||| | | ||||||||  ||||||||| |||||||| ||||| ||| ||||||||||||||| ||||||| |||||    
T  86 tccttttagtttgaccgaattcctaagttagta-tttaagtttgaaaagtttcaaatatgtcattttagttgataaactatttcactgttac 176  T

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Target: scaffold0070 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 498 - 594
Target Start/End: Original strand, 28607 - 28703
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 594  Q
    |||||||||| |||| ||||| |  ||||||||||||||||  ||||||||||| ||||||||| ||||||||||||||| ||||||| ||||||||    
T  28607 ggtccttttaatttgacagaattctcaagttagtcctttaaaattcaaaagtttcaaataggtcattttagttgataaactatttcactgttacccc 28703  T

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Target: scaffold0070; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 481 - 567
Target Start/End: Original strand, 28530 - 28616
Alignment:
Q  481 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtcctttta 567  Q
    |||||||||||||  |||||||||||| |||| ||||| |||||||||||||||||||||||  ||||||| || ||||||||||||    
T  28530 ggtcaaataccacaattggtccttttaatttgacagaatttccaagttagtcctttaagttttgaaagtttcaattaggtcctttta 28616  T

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Target: scaffold0041 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 481 - 570
Target Start/End: Complemental strand, 45340 - 45252
Alignment:
Q  481 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||||||||||||| ||||||||| ||||| || || |  |||||||||| ||||||||| |||||||| || |||||||||||||||    
T  45340 ggtcaaataccacttt-ggtccttttggtttgacataattctcaagttagtcttttaagttttaaaagtttcaattaggtccttttagtt 45252  T

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Target: scaffold0041; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 498 - 567
Target Start/End: Complemental strand, 45264 - 45195
Alignment:
Q  498 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtcctttta 567  Q
    ||||||||||||||| || || || ||| |||||| ||||||||| |||||||| |||||| ||||||||    
T  45264 ggtccttttagtttgacataattttcaaattagtcatttaagttttaaaagtttcaaatagatcctttta 45195  T

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Target: scaffold0027 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 3)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 484 - 570
Target Start/End: Complemental strand, 10008 - 9922
Alignment:
Q  484 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    |||||| ||| ||| |||||||||||||| ||||| |  ||||||||| ||||||||||| ||||||| || ||| |||||||||||    
T  10008 caaatatcacgtttcgtccttttagtttgacagaattctcaagttagttctttaagtttcgaaagtttcaattagttccttttagtt 9922  T

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Target: scaffold0027; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 481 - 570
Target Start/End: Original strand, 9380 - 9469
Alignment:
Q  481 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 570  Q
    ||||||||| || |||| |||||||||||||| ||||| |   ||||||||| ||||||||||  |||||| || |||||||||||||||    
T  9380 ggtcaaatatcatttttcgtccttttagtttgacagaattcttaagttagtcatttaagtttcggaagtttcaattaggtccttttagtt 9469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 546 - 594
Target Start/End: Original strand, 9496 - 9544
Alignment:
Q  546 aagttttaaataggtccttttagttgataaacaatttcaccgttacccc 594  Q
    |||||| ||||||||||||||||||||||||| ||||||| ||||||||    
T  9496 aagtttcaaataggtccttttagttgataaactatttcactgttacccc 9544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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