View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1137_high_107 (Length: 305)

Name: NF1137_high_107
Description: NF1137
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1137_high_107
NF1137_high_107
[»] chr2 (47 HSPs)
chr2 (1-206)||(36194493-36194698)
chr2 (6-95)||(6901690-6901779)
chr2 (1-102)||(20147837-20147938)
chr2 (6-102)||(16706691-16706787)
chr2 (1-102)||(18878227-18878328)
chr2 (14-102)||(29110891-29110979)
chr2 (5-96)||(21557155-21557246)
chr2 (1-102)||(26617869-26617971)
chr2 (1-102)||(22492990-22493091)
chr2 (1-102)||(27650825-27650926)
chr2 (1-102)||(42119731-42119832)
chr2 (1-91)||(17796505-17796595)
chr2 (9-102)||(12968688-12968781)
chr2 (6-102)||(42241485-42241582)
chr2 (10-102)||(32734376-32734468)
chr2 (13-102)||(28747339-28747428)
chr2 (1-101)||(29906300-29906400)
chr2 (36-102)||(16253230-16253296)
chr2 (1-102)||(28277273-28277374)
chr2 (43-102)||(15892041-15892100)
chr2 (20-102)||(5306866-5306948)
chr2 (33-102)||(31992329-31992398)
chr2 (10-102)||(40501022-40501114)
chr2 (43-102)||(18036557-18036616)
chr2 (36-102)||(31770117-31770183)
chr2 (36-102)||(16413491-16413555)
chr2 (36-102)||(2919749-2919815)
chr2 (36-102)||(10365023-10365089)
chr2 (36-102)||(16581252-16581318)
chr2 (36-102)||(35491389-35491455)
chr2 (53-102)||(26858945-26858994)
chr2 (13-102)||(37058590-37058679)
chr2 (31-102)||(20988270-20988341)
chr2 (36-102)||(40679001-40679067)
chr2 (36-102)||(41499467-41499533)
chr2 (36-102)||(19472020-19472083)
chr2 (54-100)||(534087-534133)
chr2 (36-102)||(28472532-28472598)
chr2 (36-102)||(34638720-34638786)
chr2 (36-102)||(39393645-39393711)
chr2 (56-102)||(39800228-39800274)
chr2 (1-48)||(29906165-29906212)
chr2 (1-48)||(42241676-42241723)
chr2 (56-102)||(3941511-3941557)
chr2 (64-102)||(20530150-20530188)
chr2 (36-102)||(22001600-22001666)
chr2 (36-102)||(29067484-29067550)
[»] chr5 (43 HSPs)
chr5 (1-102)||(15798480-15798581)
chr5 (1-102)||(12742430-12742531)
chr5 (1-102)||(12805248-12805349)
chr5 (1-102)||(2598933-2599034)
chr5 (6-102)||(7082011-7082107)
chr5 (1-98)||(19747775-19747872)
chr5 (1-102)||(28717792-28717893)
chr5 (1-102)||(16418484-16418585)
chr5 (1-102)||(36312344-36312445)
chr5 (1-97)||(10975531-10975627)
chr5 (6-102)||(17367127-17367223)
chr5 (1-102)||(19400077-19400178)
chr5 (1-102)||(25360983-25361084)
chr5 (1-102)||(40009242-40009343)
chr5 (1-102)||(3458550-3458651)
chr5 (6-102)||(33370370-33370469)
chr5 (27-102)||(34595067-34595142)
chr5 (36-102)||(35927828-35927894)
chr5 (33-102)||(13131474-13131543)
chr5 (13-100)||(37396438-37396521)
chr5 (1-102)||(8435751-8435852)
chr5 (41-96)||(7576521-7576576)
chr5 (43-102)||(18920478-18920537)
chr5 (36-102)||(1400694-1400760)
chr5 (36-102)||(35565021-35565087)
chr5 (56-102)||(3601110-3601156)
chr5 (36-102)||(8537699-8537765)
chr5 (36-102)||(7617-7683)
chr5 (36-102)||(542031-542097)
chr5 (36-102)||(11346458-11346524)
chr5 (36-102)||(18308009-18308075)
chr5 (36-102)||(25498143-25498209)
chr5 (36-102)||(30709347-30709413)
chr5 (13-81)||(21290350-21290418)
chr5 (54-102)||(42865044-42865092)
chr5 (1-48)||(33370230-33370277)
chr5 (36-102)||(8576533-8576599)
chr5 (56-102)||(11027546-11027592)
chr5 (6-48)||(12742298-12742340)
chr5 (6-48)||(12805117-12805159)
chr5 (36-102)||(27661769-27661835)
chr5 (56-102)||(38853927-38853973)
chr5 (2-42)||(23229195-23229235)
[»] chr4 (57 HSPs)
chr4 (1-102)||(20759528-20759629)
chr4 (1-102)||(20765919-20766020)
chr4 (1-98)||(3393019-3393116)
chr4 (6-102)||(20779260-20779356)
chr4 (6-102)||(21711280-21711376)
chr4 (6-102)||(32938293-32938389)
chr4 (1-102)||(31323889-31323990)
chr4 (6-102)||(14331085-14331181)
chr4 (4-102)||(23124923-23125021)
chr4 (6-102)||(49063700-49063796)
chr4 (3-102)||(42420759-42420858)
chr4 (1-102)||(1225875-1225976)
chr4 (1-102)||(33163935-33164036)
chr4 (6-102)||(17210987-17211082)
chr4 (2-102)||(31931298-31931398)
chr4 (1-102)||(13850464-13850565)
chr4 (1-102)||(18412310-18412411)
chr4 (6-102)||(24606472-24606568)
chr4 (16-102)||(3510820-3510906)
chr4 (37-102)||(24074857-24074922)
chr4 (1-102)||(44100060-44100161)
chr4 (13-102)||(12587374-12587463)
chr4 (21-102)||(25144232-25144312)
chr4 (21-102)||(31825020-31825101)
chr4 (8-101)||(46816918-46817011)
chr4 (33-101)||(17291702-17291770)
chr4 (1-81)||(13865989-13866069)
chr4 (36-102)||(23950451-23950517)
chr4 (27-102)||(11866532-11866607)
chr4 (36-102)||(242807-242873)
chr4 (36-102)||(957846-957912)
chr4 (36-102)||(29699705-29699771)
chr4 (53-102)||(9489446-9489495)
chr4 (53-102)||(51428582-51428631)
chr4 (43-102)||(21412916-21412975)
chr4 (36-102)||(1042501-1042567)
chr4 (36-102)||(6282714-6282780)
chr4 (53-102)||(34153679-34153728)
chr4 (53-102)||(44560571-44560620)
chr4 (53-102)||(49424150-49424199)
chr4 (36-102)||(11288044-11288111)
chr4 (1-48)||(14331284-14331331)
chr4 (55-102)||(28082007-28082054)
chr4 (36-102)||(21017568-21017634)
chr4 (51-100)||(10312047-10312096)
chr4 (71-103)||(893501-893533)
chr4 (1-48)||(21711134-21711181)
chr4 (1-48)||(24606331-24606378)
chr4 (1-48)||(49063559-49063606)
chr4 (56-102)||(13181687-13181733)
chr4 (56-102)||(55794378-55794424)
chr4 (6-43)||(20779381-20779418)
chr4 (53-102)||(34530187-34530236)
chr4 (53-102)||(39588696-39588745)
chr4 (54-102)||(8351848-8351896)
chr4 (8-48)||(17210852-17210892)
chr4 (46-102)||(42886024-42886079)
[»] chr8 (29 HSPs)
chr8 (3-102)||(12505109-12505208)
chr8 (6-102)||(16575422-16575518)
chr8 (6-102)||(43692867-43692963)
chr8 (21-102)||(8751512-8751593)
chr8 (1-102)||(22843728-22843829)
chr8 (13-102)||(27783183-27783272)
chr8 (1-102)||(28706530-28706631)
chr8 (6-102)||(40414340-40414437)
chr8 (1-102)||(43640407-43640508)
chr8 (21-102)||(3589642-3589723)
chr8 (1-102)||(24630278-24630379)
chr8 (33-102)||(31172204-31172273)
chr8 (1-102)||(32109316-32109417)
chr8 (8-102)||(12785607-12785701)
chr8 (51-102)||(42603229-42603280)
chr8 (36-102)||(18440683-18440749)
chr8 (36-102)||(37780403-37780469)
chr8 (53-102)||(40702137-40702186)
chr8 (53-102)||(41857362-41857411)
chr8 (36-102)||(24861103-24861169)
chr8 (36-102)||(26452085-26452151)
chr8 (36-102)||(41275154-41275220)
chr8 (46-102)||(33799939-33799995)
chr8 (36-99)||(2416675-2416738)
chr8 (53-102)||(44943468-44943517)
chr8 (1-47)||(14998561-14998607)
chr8 (54-96)||(26172227-26172269)
chr8 (54-103)||(15032711-15032760)
chr8 (1-46)||(43692726-43692771)
[»] chr7 (51 HSPs)
chr7 (1-102)||(12082641-12082742)
chr7 (1-102)||(11824399-11824500)
chr7 (1-98)||(16886888-16886985)
chr7 (1-102)||(2356006-2356107)
chr7 (14-102)||(12309986-12310074)
chr7 (6-102)||(26926231-26926327)
chr7 (1-102)||(18237280-18237381)
chr7 (1-102)||(30360234-30360335)
chr7 (1-102)||(41217326-41217427)
chr7 (13-101)||(7066456-7066544)
chr7 (1-102)||(7414397-7414498)
chr7 (1-98)||(8726611-8726708)
chr7 (1-102)||(26603594-26603695)
chr7 (1-102)||(27318225-27318325)
chr7 (1-102)||(28065966-28066066)
chr7 (1-102)||(47268627-47268728)
chr7 (6-102)||(21615149-21615245)
chr7 (13-102)||(7061965-7062054)
chr7 (1-102)||(20379075-20379176)
chr7 (1-102)||(48221131-48221232)
chr7 (1-102)||(149805-149899)
chr7 (1-102)||(18146673-18146774)
chr7 (1-102)||(40592450-40592551)
chr7 (27-102)||(3381069-3381143)
chr7 (33-102)||(1642976-1643045)
chr7 (33-102)||(3924564-3924633)
chr7 (8-96)||(1321685-1321772)
chr7 (36-102)||(48270400-48270466)
chr7 (51-102)||(21650290-21650341)
chr7 (36-102)||(28979412-28979478)
chr7 (36-102)||(34140617-34140683)
chr7 (36-102)||(36394213-36394279)
chr7 (36-102)||(41048542-41048608)
chr7 (1-73)||(31267106-31267178)
chr7 (1-102)||(41935751-41935847)
chr7 (36-102)||(17839075-17839141)
chr7 (53-99)||(21187679-21187725)
chr7 (36-102)||(40588301-40588367)
chr7 (36-102)||(48315565-48315631)
chr7 (36-102)||(13916586-13916652)
chr7 (36-102)||(42682708-42682774)
chr7 (36-102)||(45363632-45363698)
chr7 (53-99)||(46862586-46862632)
chr7 (57-102)||(5282583-5282628)
chr7 (62-95)||(28008530-28008563)
chr7 (57-101)||(16781421-16781465)
chr7 (1-48)||(8726797-8726844)
chr7 (1-48)||(39477624-39477671)
chr7 (1-48)||(40592315-40592362)
chr7 (36-102)||(28114782-28114848)
chr7 (70-102)||(44110673-44110705)
[»] chr1 (53 HSPs)
chr1 (1-102)||(48707306-48707407)
chr1 (6-102)||(5764926-5765022)
chr1 (1-102)||(21485024-21485125)
chr1 (1-102)||(21760758-21760859)
chr1 (6-102)||(30310215-30310311)
chr1 (6-98)||(18169745-18169837)
chr1 (6-102)||(18842159-18842255)
chr1 (1-102)||(27035707-27035808)
chr1 (1-102)||(34335918-34336019)
chr1 (21-102)||(39224587-39224668)
chr1 (1-102)||(48568799-48568900)
chr1 (1-102)||(49599253-49599354)
chr1 (1-102)||(50068649-50068750)
chr1 (1-102)||(41875279-41875380)
chr1 (1-102)||(46181943-46182044)
chr1 (6-102)||(12026255-12026351)
chr1 (1-102)||(27259646-27259745)
chr1 (20-102)||(26793042-26793124)
chr1 (1-102)||(25803956-25804056)
chr1 (27-102)||(31452139-31452214)
chr1 (20-102)||(19262767-19262849)
chr1 (36-102)||(24364158-24364224)
chr1 (43-102)||(16532431-16532490)
chr1 (36-102)||(16098321-16098386)
chr1 (1-102)||(17696764-17696862)
chr1 (41-99)||(39900298-39900356)
chr1 (41-102)||(27799412-27799473)
chr1 (43-102)||(16077565-16077624)
chr1 (1-59)||(3658373-3658431)
chr1 (36-102)||(49396454-49396520)
chr1 (53-102)||(4209018-4209067)
chr1 (53-102)||(13972692-13972741)
chr1 (43-102)||(13283464-13283523)
chr1 (36-102)||(27487079-27487145)
chr1 (36-102)||(29435723-29435789)
chr1 (36-102)||(36909311-36909377)
chr1 (36-102)||(41780443-41780509)
chr1 (36-102)||(44337709-44337775)
chr1 (36-102)||(49427138-49427204)
chr1 (55-102)||(6435541-6435588)
chr1 (43-102)||(17372484-17372543)
chr1 (36-102)||(19160067-19160133)
chr1 (36-102)||(29762610-29762676)
chr1 (1-57)||(45688869-45688925)
chr1 (1-48)||(3658238-3658285)
chr1 (54-101)||(14174149-14174196)
chr1 (51-102)||(14772932-14772982)
chr1 (1-48)||(39224792-39224839)
chr1 (1-48)||(46182132-46182179)
chr1 (1-48)||(49599446-49599493)
chr1 (36-102)||(42572166-42572232)
chr1 (36-102)||(49926757-49926823)
chr1 (8-48)||(48568993-48569033)
[»] chr3 (56 HSPs)
chr3 (1-102)||(14265137-14265238)
chr3 (6-102)||(37281186-37281282)
chr3 (1-102)||(1638994-1639095)
chr3 (1-102)||(33449531-33449632)
chr3 (6-102)||(6464734-6464830)
chr3 (4-102)||(19237016-19237114)
chr3 (1-102)||(25576979-25577080)
chr3 (12-97)||(36721757-36721842)
chr3 (1-102)||(48087946-48088047)
chr3 (6-102)||(6753938-6754034)
chr3 (6-102)||(17370535-17370631)
chr3 (1-102)||(15636753-15636854)
chr3 (1-102)||(42382000-42382101)
chr3 (1-102)||(42382780-42382881)
chr3 (6-102)||(7953937-7954033)
chr3 (12-102)||(8633748-8633838)
chr3 (8-102)||(17267688-17267782)
chr3 (1-102)||(774727-774827)
chr3 (1-102)||(42950409-42950510)
chr3 (1-102)||(44835876-44835977)
chr3 (1-102)||(53827085-53827186)
chr3 (20-102)||(50343004-50343086)
chr3 (1-102)||(55391160-55391264)
chr3 (1-102)||(29635311-29635412)
chr3 (1-102)||(39417342-39417443)
chr3 (41-102)||(4095551-4095612)
chr3 (1-102)||(47065416-47065517)
chr3 (14-102)||(43688122-43688209)
chr3 (43-102)||(34647655-34647714)
chr3 (42-102)||(25156247-25156307)
chr3 (13-95)||(3163021-3163103)
chr3 (36-102)||(13896259-13896325)
chr3 (36-102)||(41577692-41577758)
chr3 (53-102)||(46346964-46347013)
chr3 (36-102)||(2268882-2268948)
chr3 (36-102)||(4004476-4004542)
chr3 (36-102)||(7245858-7245924)
chr3 (36-102)||(20378276-20378342)
chr3 (36-102)||(45100855-45100921)
chr3 (36-102)||(49219125-49219191)
chr3 (36-102)||(49610253-49610319)
chr3 (36-95)||(2428251-2428310)
chr3 (36-103)||(3495417-3495484)
chr3 (1-48)||(6753796-6753843)
chr3 (36-102)||(2647265-2647331)
chr3 (36-102)||(24702660-24702726)
chr3 (36-102)||(43476808-43476874)
chr3 (36-102)||(51695995-51696061)
chr3 (36-102)||(52569797-52569863)
chr3 (1-48)||(6464926-6464973)
chr3 (1-48)||(19236881-19236928)
chr3 (1-48)||(25577169-25577216)
chr3 (51-102)||(27186727-27186778)
chr3 (1-48)||(37281044-37281091)
chr3 (1-48)||(39417537-39417584)
chr3 (7-48)||(15636626-15636667)
[»] scaffold0027 (1 HSPs)
scaffold0027 (1-93)||(36378-36470)
[»] scaffold0004 (1 HSPs)
scaffold0004 (6-102)||(39597-39693)
[»] chr6 (34 HSPs)
chr6 (1-102)||(3097895-3097996)
chr6 (1-102)||(18744351-18744452)
chr6 (1-102)||(28051120-28051221)
chr6 (1-102)||(800885-800986)
chr6 (1-102)||(20243891-20243992)
chr6 (1-102)||(22137875-22137976)
chr6 (1-102)||(35060357-35060458)
chr6 (1-101)||(14483203-14483303)
chr6 (27-102)||(17465665-17465740)
chr6 (1-102)||(5570855-5570954)
chr6 (1-102)||(24559590-24559691)
chr6 (36-102)||(26856440-26856506)
chr6 (13-102)||(5973412-5973501)
chr6 (1-103)||(14095364-14095466)
chr6 (33-102)||(20242524-20242593)
chr6 (33-102)||(22136508-22136577)
chr6 (43-102)||(34132343-34132402)
chr6 (13-102)||(21865279-21865368)
chr6 (36-102)||(13402287-13402353)
chr6 (53-101)||(32028018-32028066)
chr6 (53-101)||(32038077-32038125)
chr6 (51-102)||(12062232-12062283)
chr6 (43-102)||(30257780-30257839)
chr6 (36-102)||(3766110-3766176)
chr6 (36-94)||(14114789-14114847)
chr6 (36-102)||(29066312-29066378)
chr6 (36-102)||(29075325-29075391)
chr6 (36-102)||(29080089-29080155)
chr6 (36-102)||(29107931-29107997)
chr6 (36-102)||(29110294-29110360)
chr6 (44-102)||(33718820-33718878)
chr6 (53-102)||(34803285-34803334)
chr6 (8-102)||(17523637-17523731)
chr6 (27-81)||(30765398-30765452)
[»] scaffold0294 (1 HSPs)
scaffold0294 (27-102)||(749-824)
[»] scaffold0121 (1 HSPs)
scaffold0121 (5-102)||(5063-5160)
[»] scaffold0591 (1 HSPs)
scaffold0591 (16-102)||(2412-2498)
[»] scaffold0181 (1 HSPs)
scaffold0181 (36-102)||(24657-24723)
[»] scaffold0176 (1 HSPs)
scaffold0176 (36-102)||(1542-1608)
[»] scaffold0192 (1 HSPs)
scaffold0192 (55-102)||(18283-18330)
[»] scaffold0101 (1 HSPs)
scaffold0101 (36-102)||(36093-36159)


Alignment Details
Target: chr2 (Bit Score: 161; Significance: 7e-86; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 36194698 - 36194493
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  36194698 ttaattgtttagatgtctacatgttaatgttgtagttatgagttttaagatttatgtataatttgcactttaagtgtttgatgaaatgtttgaatgagtt 36194599  T
Q  101 ttaggatacttcnnnnnnntaatgataaactagtaatgtttatttctttataagtgctatatatttgcagttccacgttcctttttataactaaaataga 200  Q
    ||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |    
T  36194598 ttaggatacttccaaaaaataatgataaactagtaatgtttatttctttataagtgctatatatttgcagttccacgttcctttttataaccaaaataaa 36194499  T
Q  201 gataat 206  Q
    ||||||    
T  36194498 gataat 36194493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 6901690 - 6901779
Alignment:
Q  6 tgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaat 95  Q
    ||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  6901690 tgtttcgatgtttgcatgttaatgttgtagttatgagttttagggtttatgtataatttgcactccaagtgtttgatgaaatgtttgaat 6901779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 20147837 - 20147938
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||||||| || |||||    
T  20147837 ttaattgtttagatgtttgcatgttaatgttgtaattatgagttttagggtttatgtataatttgcactccaagtgtttggtgaaatgtttaaacgagtt 20147936  T
Q  101 tt 102  Q
    ||    
T  20147937 tt 20147938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 16706691 - 16706787
Alignment:
Q  6 tgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| |||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16706691 tgtttaaatgtttgcatgttaatgttgtagttatgaattttagggtttatgtataatttgcactctaagtgtttgatgaaatgtttgaatgagtttt 16706787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 18878227 - 18878328
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    ||||||||||| ||||||  ||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  18878227 ttaattgtttatatgtttgtatgtttatgttgtagttatgagttttaaggtttatgtataatttgcactccaagtgttcgatgaaatgtttgaatgagtt 18878326  T
Q  101 tt 102  Q
    ||    
T  18878327 tt 18878328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 29110891 - 29110979
Alignment:
Q  14 tgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  29110891 tgtttgcatgttaatgttgtagttatgagttctagggtttatgtataatttgcactccaagtgtttgatgaattgtttgaatgagtttt 29110979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 21557246 - 21557155
Alignment:
Q  5 ttgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatg 96  Q
    |||||||||||||| |||||| ||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  21557246 ttgtttagatgtttgcatgtttatgttgtagttttgagttttagagtttatgtataatttgcactccaagtgtttgatgaaatgtttgaatg 21557155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 26617971 - 26617869
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggattt-atgtataatttgcactccaagtgtttgatgaaatgtttgaatgagt 99  Q
    ||||||||| |||||||| |||||| ||||||||||||||||||||||| ||| ||||||||| | ||||||||||||||||||||||||||||||||||    
T  26617971 ttaattgttaagatgtttgcatgtttatgttgtagttatgagttttagggttttatgtataatgttcactccaagtgtttgatgaaatgtttgaatgagt 26617872  T
Q  100 ttt 102  Q
    |||    
T  26617871 ttt 26617869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 22492990 - 22493091
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||| ||||||||||| |||||| ||||||||||||| | ||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  22492990 ttaattatttagatgtttgcatgtttatgttgtagttatcatttttagggtttatgtataatttgcactccaagtgtttgataaaatgttggaatgagtt 22493089  T
Q  101 tt 102  Q
    ||    
T  22493090 tt 22493091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 27650926 - 27650825
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||  ||||||| || |||||||||||| ||||||||||||| ||||||||||||    
T  27650926 ttaattgtttagatgtttgcatgtttatgttgtagttatgagttttagagtttatgtttattttgcactccaaatgtttgatgaaatatttgaatgagtt 27650827  T
Q  101 tt 102  Q
    ||    
T  27650826 tt 27650825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 42119731 - 42119832
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||| ||||||||||| |||||| ||||||||||||| | ||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  42119731 ttaattatttagatgtttgcatgtttatgttgtagttatcatttttagggtttatgtataatttgcactccaagtgtttgataaaatgttggaatgagtt 42119830  T
Q  101 tt 102  Q
    ||    
T  42119831 tt 42119832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 17796595 - 17796505
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgttt 91  Q
    |||||||||||||||||| |||||| ||||||||||||| | ||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  17796595 ttaattgtttagatgtttgcatgtttatgttgtagttatcatttttagggtttatgtataattttcactccaagtgtttgatgaaatgttt 17796505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 12968781 - 12968688
Alignment:
Q  9 ttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||||||| |||||| ||||||||||||| | ||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  12968781 ttagatgtttgcatgtttatgttgtagttatcatttttagggtttatgtataatttgcactccaagtgtttgataaaatgttggaatgagtttt 12968688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 6 - 102
Target Start/End: Complemental strand, 42241582 - 42241485
Alignment:
Q  6 tgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactcc-aagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||| ||||||||||| ||||    
T  42241582 tgtttggatgtttgcatgttaatgttgtagttatgagtttttggatttatgtataattttcactccaaagtgtttgatgaattgtttgaatgaatttt 42241485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 102
Target Start/End: Original strand, 32734376 - 32734468
Alignment:
Q  10 tagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||||| |||||| ||||||||||||| | ||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  32734376 tagatgtttgcatgtttatgttgtagttatcatttttagggtttatgtataatttgcactccaagtgtttcatgaaatgttggaatgagtttt 32734468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 28747428 - 28747339
Alignment:
Q  13 atgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| |||||| ||||| ||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||| ||||||||||    
T  28747428 atgtttgcatgtttatgttatagttatgagttttagggtttatgtataatttgcacttcaagtttttgatgaaatgtttaaatgagtttt 28747339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 29906300 - 29906400
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||| || |||||||| |||||| ||||||||||||| | |||| || |||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  29906300 ttaattattcagatgtttgcatgtttatgttgtagttatcatttttcgggtttatgtataatttgcactccaagtgtttgataaaatgttggaatgagtt 29906399  T
Q  101 t 101  Q
    |    
T  29906400 t 29906400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 16253230 - 16253296
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  16253230 ttatgatttttaggttttatgtataatttgcactccaagtgtttgataaaatgtttgaatgagtttt 16253296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 28277374 - 28277273
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||| ||||||| ||| |||||| ||||||||  ||||||||||||| |||||||||||||||||||||| || ||||||||||| | ||||||| ||    
T  28277374 ttaattatttagatttttgcatgtttatgttgtaactatgagttttagggtttatgtataatttgcactccacgtttttgatgaaatctatgaatgaatt 28277275  T
Q  101 tt 102  Q
    ||    
T  28277274 tt 28277273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 15892100 - 15892041
Alignment:
Q  43 ttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  15892100 ttttagggtttatgtataatttgcactcaaagtgtttgatgaaatgtttgaatgagtttt 15892041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 102
Target Start/End: Complemental strand, 5306948 - 5306866
Alignment:
Q  20 catgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||||||| | ||||||||| |||||||||||||| ||||| ||||||| |||||||||||||||||| ||||    
T  5306948 catgtttatgttgtagtttttagttttagggtttatgtataattttcactctaagtgttcgatgaaatgtttgaatgattttt 5306866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 102
Target Start/End: Complemental strand, 31992398 - 31992329
Alignment:
Q  33 tagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||||| ||||||| ||||||| |||||||||||| ||||||||||||||||| |||||||||||||    
T  31992398 tagttatgatttttagggtttatgtttaatttgcactctaagtgtttgatgaaatgcttgaatgagtttt 31992329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 102
Target Start/End: Original strand, 40501022 - 40501114
Alignment:
Q  10 tagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||||| |||||| |||||||| || | ||||||||| |||||||||||||||| || ||  ||||||||||||| ||||||||||||||    
T  40501022 tagatgtttgcatgtttatgttgtattttttagttttagggtttatgtataatttgcgcttcagatgtttgatgaaatatttgaatgagtttt 40501114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 18036616 - 18036557
Alignment:
Q  43 ttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  18036616 ttttaggaattatgtataatttgcactccaagtgtttgacaaaatgtttgaatgagtttt 18036557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 31770117 - 31770183
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||| ||| ||||||||||||||  ||||||||||||||||||||||||||||||||    
T  31770117 ttatgatttttagggtttttgtataatttgcacatcaagtgtttgatgaaatgtttgaatgagtttt 31770183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 16413555 - 16413491
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||| |||||||||||||||||||||||  ||||||| |||||||||||||||||||    
T  16413555 ttatgatttttaggttttatgtataatttgcactccaa--gtttgataaaatgtttgaatgagtttt 16413491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 2919815 - 2919749
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | ||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  2919815 ttatgatttttagagtctatgtataatttgcacatcaagtgtttgatgaaatgtttgaatgagtttt 2919749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 10365089 - 10365023
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | ||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  10365089 ttatgatttttagcgtctatgtataatttgcacatcaagtgtttgatgaaatgtttgaatgagtttt 10365023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 16581252 - 16581318
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | ||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  16581252 ttatgatttttagagtctatgtataatttgcacatcaagtgtttgatgaaatgtttgaatgagtttt 16581318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 35491389 - 35491455
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | ||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  35491389 ttatgatttttagagtctatgtataatttgcacatcaagtgtttgatgaaatgtttgaatgagtttt 35491455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 26858945 - 26858994
Alignment:
Q  53 tatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  26858945 tatgtataatttgcacatcaagtgtttgatgaaatgtttgaatgagtttt 26858994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 37058590 - 37058679
Alignment:
Q  13 atgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||| ||||| ||||| | ||| | ||||||||| |||| ||||| ||||||||  |||||||| ||||||||||||||||||||||    
T  37058590 atgtttatatgtttatgttttggtttttagttttagggtttacgtatattttgcactttaagtgtttaatgaaatgtttgaatgagtttt 37058679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 102
Target Start/End: Original strand, 20988270 - 20988341
Alignment:
Q  31 tgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||| |||||||||   ||||||||||||||||||  ||||| |||||| |||||||||||||||||||    
T  20988270 tgtagttttgagttttaatgtttatgtataatttgcaccgcaagtatttgataaaatgtttgaatgagtttt 20988341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 40679067 - 40679001
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | ||||||||||||||||   |||||||||||||||||||||||||||||||    
T  40679067 ttatgatttttagagtctatgtataatttgcacattaagtgtttgatgaaatgtttgaatgagtttt 40679001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 41499533 - 41499467
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | ||||| ||||||||||  ||||||||||||||||||||||||||||||||    
T  41499533 ttatgatttttagagtgtatgtctaatttgcacatcaagtgtttgatgaaatgtttgaatgagtttt 41499467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 19472083 - 19472020
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | ||||||||||||||||   |||||||||||||||||||||||||||||||    
T  19472083 ttatgatttttagagtgtatgtataatttgcac---aagtgtttgatgaaatgtttgaatgagtttt 19472020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 534087 - 534133
Alignment:
Q  54 atgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    ||||||| |||||||||||||||||||||||||||| ||||| ||||    
T  534087 atgtatattttgcactccaagtgtttgatgaaatgtctgaataagtt 534133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 28472532 - 28472598
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | |||||||||| |||||  |||||||| |||||||||||||||||||||||    
T  28472532 ttatgaattttagagtctatgtataatgtgcacatcaagtgttcgatgaaatgtttgaatgagtttt 28472598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 34638720 - 34638786
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | |||||||||| |||||  |||||||||||||||||||||||| |||||||    
T  34638720 ttatgaattttagagtctatgtataatgtgcacatcaagtgtttgatgaaatgtttgaaagagtttt 34638786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 39393645 - 39393711
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | |||||||||| |||||  |||||||| |||||||||||||||||||||||    
T  39393645 ttatgaattttagagtctatgtataatgtgcacatcaagtgttagatgaaatgtttgaatgagtttt 39393711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 102
Target Start/End: Complemental strand, 39800274 - 39800228
Alignment:
Q  56 gtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||| |||||  ||||||||||||||||||||||||||||||||    
T  39800274 gtataatgtgcacatcaagtgtttgatgaaatgtttgaatgagtttt 39800228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 29906165 - 29906212
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttag 48  Q
    |||| ||||||||||||| |||||| ||||||||||| ||||||||||    
T  29906165 ttaaatgtttagatgtttgcatgtttatgttgtagttttgagttttag 29906212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 42241723 - 42241676
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttag 48  Q
    |||| ||||||||||||| |||||| ||||||||||| ||||||||||    
T  42241723 ttaaatgtttagatgtttgcatgtttatgttgtagttttgagttttag 42241676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 102
Target Start/End: Original strand, 3941511 - 3941557
Alignment:
Q  56 gtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||| |||||  |||| |||||||||||||||||||||||||||    
T  3941511 gtataatgtgcacatcaagcgtttgatgaaatgtttgaatgagtttt 3941557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 102
Target Start/End: Complemental strand, 20530188 - 20530150
Alignment:
Q  64 tgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||||||||| |||||||||||||| ||||||||||    
T  20530188 tgcactccaagtggttgatgaaatgttttaatgagtttt 20530150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 22001600 - 22001666
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | |||||||||| |||||  |||||||| |||||||||| ||||||||||||    
T  22001600 ttatgaattttagagtctatgtataatgtgcacatcaagtgttcgatgaaatgtctgaatgagtttt 22001666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 29067484 - 29067550
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | |||||||||  |||||  ||||||||||||||||||||| ||||||||||    
T  29067484 ttatgaattttagagtctatgtataacgtgcacatcaagtgtttgatgaaatgtttaaatgagtttt 29067550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 2e-43; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 15798581 - 15798480
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15798581 ttaattgtttagatgtttgcatgttgatgttgtagttattagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 15798482  T
Q  101 tt 102  Q
    ||    
T  15798481 tt 15798480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 12742430 - 12742531
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  12742430 ttaattgtttagatgtttgcatgttaatgttgtagttatgagttttagggtttatgtataatttgcacttcaagtgtttaatgaaatgtttgaatgagtt 12742529  T
Q  101 tt 102  Q
    ||    
T  12742530 tt 12742531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 12805248 - 12805349
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  12805248 ttaattgtttagatgtttgcatgttaatgttgtagttatgagttttagggtttatgtataatttgcacttcaagtgtttaatgaaatgtttgaatgagtt 12805347  T
Q  101 tt 102  Q
    ||    
T  12805348 tt 12805349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 2598933 - 2599034
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  2598933 ttaaatgtttagatgtttgcatgtttatgttgtagttatgagttttaggatttatgtataatttacactccaaatgtttgatgaaatgtttgaatgagtt 2599032  T
Q  101 tt 102  Q
    ||    
T  2599033 tt 2599034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 7082011 - 7082107
Alignment:
Q  6 tgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  7082011 tgtttggatgtttgcatgttaatgttgtagttatgagttttagggtttatgtataatttgcactccaagtgtttgatgaattgtttgaatgagtttt 7082107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 19747775 - 19747872
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgag 98  Q
    |||||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  19747775 ttaattgtttagatttttgcatgtttatgttgtagttatgagttttaggatttatgtataatttgtactccaagtgttttatgaaatgtttgaatgag 19747872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 28717792 - 28717893
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||||||||||||||| |||||| ||||||||||||||| ||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  28717792 ttaattgtttagatgtttgcatgtttatgttgtagttatgacttttagggtttatgtatattttgcactccaagtgttagatgaaatgtttgaatgagtt 28717891  T
Q  101 tt 102  Q
    ||    
T  28717892 tt 28717893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 16418585 - 16418484
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||| ||||| ||||||| |||||| ||||||||||| | ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16418585 ttaaatgttttgatgtttgcatgtttatgttgtagtttttagttttagagtttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 16418486  T
Q  101 tt 102  Q
    ||    
T  16418485 tt 16418484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 36312445 - 36312344
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    ||||||| |||||||||| |||||| |||||||||| |||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||| ||||    
T  36312445 ttaattgcttagatgtttgcatgtttatgttgtagtaatgagttttagggtttatgtataatttcgactccaagtgtttgatgaaatgtttgaattagtt 36312346  T
Q  101 tt 102  Q
    ||    
T  36312345 tt 36312344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 10975531 - 10975627
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatga 97  Q
    |||||||| ||||||||  |||||| |||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  10975531 ttaattgtctagatgttagcatgtttatgttgtagttatgagatttagagtttatgtataatttgcactccaagtgtttgatgaaatgtttgaatga 10975627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 6 - 102
Target Start/End: Complemental strand, 17367223 - 17367127
Alignment:
Q  6 tgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||||||||| |||||| ||||||||||||| | ||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  17367223 tgtttagatgtttgcatgtttatgttgtagttatcatttttaggttttatgtataatttgcactccaattgtttaatgaaatgtttgaatgagtttt 17367127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 19400077 - 19400178
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||| ||||||||||| |||||| ||||||||||||| | |||||||  ||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  19400077 ttaattatttagatgtttgcatgtttatgttgtagttatcatttttagggcttatgtataatttgcactccaagtgtttgataaaatgttggaatgagtt 19400176  T
Q  101 tt 102  Q
    ||    
T  19400177 tt 19400178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 25361084 - 25360983
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||| |||||||||||  ||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||| |||  |||||||||||||||||    
T  25361084 ttaattatttagatgtttgtatgtttatgttgtagttatgtgttttagggtttatgtataatttgcactccaagtgtatgagaaaatgtttgaatgagtt 25360985  T
Q  101 tt 102  Q
    ||    
T  25360984 tt 25360983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 40009242 - 40009343
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||| ||||||||||| |||||| ||||||||||||| | ||||||||| |||||||||||| ||||||||||||||||| ||||||| |||||||||    
T  40009242 ttaattatttagatgtttgcatgtttatgttgtagttatcatttttaggatctatgtataattttcactccaagtgtttgataaaatgttggaatgagtt 40009341  T
Q  101 tt 102  Q
    ||    
T  40009342 tt 40009343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 3458550 - 3458651
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||| ||||||||||| |||||| ||||||||||||| | |||||   |||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  3458550 ttaattatttagatgtttgcatgtttatgttgtagttatcatttttaaagtttatgtataatttgcactccaagtgtttgataaaatgttggaatgagtt 3458649  T
Q  101 tt 102  Q
    ||    
T  3458650 tt 3458651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 33370370 - 33370469
Alignment:
Q  6 tgtttagatgtttacatgttaatgttgt---agttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||| ||||||| ||||||||| ||||   |||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  33370370 tgtttggatgtttgcatgttaatattgtcgtagttatgagttttagggtatatgtataatttgcactccgagtgtttgatgaaatgtttgaatgagtttt 33370469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 34595067 - 34595142
Alignment:
Q  27 atgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||||||| ||||||||||  ||||||||||||||| ||| ||| ||||||||||||||||||||||||||||    
T  34595067 atgttgtagttttgagttttagagtttatgtataatttgtactacaaatgtttgatgaaatgtttgaatgagtttt 34595142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 35927894 - 35927828
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  35927894 ttatgatttttagggtttatgtataatttgcacatcaagtgtttgatgaaatgtttgaatgagtttt 35927828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 102
Target Start/End: Complemental strand, 13131543 - 13131474
Alignment:
Q  33 tagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||||| ||||||  ||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  13131543 tagttatgatttttagtttttatgtataatttgcactccaagtgtttgaagaaatatttgaatgagtttt 13131474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 37396438 - 37396521
Alignment:
Q  13 atgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    ||||||| ||||| ||||||||||| | |||||||||     ||||||||||||||||||| ||||||||||||||||||||||||||    
T  37396438 atgtttagatgtttatgttgtagttttaagttttagg----gtgtataatttgcactccaaatgtttgatgaaatgtttgaatgagtt 37396521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 8435751 - 8435852
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||| |||||||| |||| ||||||  |||||||||| | ||||||| | ||||||| || ||||||||||||||||| ||||||| ||||||| |||||    
T  8435751 ttaaatgtttagacgtttgcatgtttttgttgtagtttttagttttatggtttatgtgtagtttgcactccaagtgttagatgaaacgtttgaaagagtt 8435850  T
Q  101 tt 102  Q
    ||    
T  8435851 tt 8435852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 7576576 - 7576521
Alignment:
Q  41 agttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatg 96  Q
    |||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  7576576 agttatagggtttatgtataatttgcactccgagtgtttgatgaaatgtttgaatg 7576521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 18920478 - 18920537
Alignment:
Q  43 ttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  18920478 ttttagggtttgtgtataatttgcactccaaatgtttgatgaaatgtttgaatgaatttt 18920537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 1400760 - 1400694
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | ||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  1400760 ttatgatttttagagtctatgtataatttgcacatcaagtgtttgatgaaatgtttgaatgagtttt 1400694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 35565021 - 35565087
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | ||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  35565021 ttatgatttttagagtctatgtataatttgcacatcaagtgtttgatgaaatgtttgaatgagtttt 35565087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 102
Target Start/End: Original strand, 3601110 - 3601156
Alignment:
Q  56 gtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||    
T  3601110 gtataatttgcacatcaagtgtttgatgaaatgtttgaatgagtttt 3601156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 8537699 - 8537765
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | |||||||||| |||||  ||||||||||||||||||||||||||||||||    
T  8537699 ttatgaattttagagtctatgtataatgtgcacatcaagtgtttgatgaaatgtttgaatgagtttt 8537765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 7683 - 7617
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | |||||||||| |||||  ||||||||||||||||| ||||||||||||||    
T  7683 ttatgaattttagagtctatgtataatgtgcacatcaagtgtttgatgaaatatttgaatgagtttt 7617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 542097 - 542031
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | |||||||||| |||||  ||||||||||||||||||||||||| ||||||    
T  542097 ttatgaattttagagtctatgtataatgtgcacatcaagtgtttgatgaaatgtttgaattagtttt 542031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 11346458 - 11346524
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | |||||||||| |||||  |||||||||||||||||||||||| |||||||    
T  11346458 ttatgaattttagagtctatgtataatgtgcacatcaagtgtttgatgaaatgtttgaaggagtttt 11346524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 18308009 - 18308075
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | |||||| |||||||||  ||||||||||||||||||||||||||| ||||    
T  18308009 ttatgatttttagagtctatgtacaatttgcacatcaagtgtttgatgaaatgtttgaatgattttt 18308075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 25498143 - 25498209
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | ||||||||||||| ||  ||||||||||||||||||||||||||| ||||    
T  25498143 ttatgatttttagagtctatgtataatttgtacatcaagtgtttgatgaaatgtttgaatgaatttt 25498209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 30709347 - 30709413
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | |||||||||| |||||  |||||||| |||||||||||||||||||||||    
T  30709347 ttatgaattttagagtctatgtataatgtgcacatcaagtgttcgatgaaatgtttgaatgagtttt 30709413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 21290350 - 21290418
Alignment:
Q  13 atgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttga 81  Q
    |||||| |||||| ||||| ||||| || |||||||  ||||||||||||||||||| |||||| ||||    
T  21290350 atgtttgcatgtttatgttatagttttgcgttttagagtttatgtataatttgcacttcaagtggttga 21290418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 42865092 - 42865044
Alignment:
Q  54 atgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||||||||||||   ||||||||||| |||||||||||||||||||    
T  42865092 atgtataatttgcacattaagtgtttgataaaatgtttgaatgagtttt 42865044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 33370230 - 33370277
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttag 48  Q
    |||| ||||||||||||| |||||| ||||||||||| ||||||||||    
T  33370230 ttaaatgtttagatgtttgcatgtttatgttgtagttttgagttttag 33370277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 8576599 - 8576533
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | |||||||||| |||||  |||||||| |||||||||||||||| ||||||    
T  8576599 ttatgaattttagagtctatgtataatgtgcacatcaagtgttcgatgaaatgtttgaattagtttt 8576533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 102
Target Start/End: Original strand, 11027546 - 11027592
Alignment:
Q  56 gtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||| |||||  |||||||| |||||||||||||||||||||||    
T  11027546 gtataatgtgcacatcaagtgttcgatgaaatgtttgaatgagtttt 11027592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 12742298 - 12742340
Alignment:
Q  6 tgtttagatgtttacatgttaatgttgtagttatgagttttag 48  Q
    ||||||||||||| |||||| ||||||||||| ||||||||||    
T  12742298 tgtttagatgtttgcatgtttatgttgtagttttgagttttag 12742340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 12805117 - 12805159
Alignment:
Q  6 tgtttagatgtttacatgttaatgttgtagttatgagttttag 48  Q
    ||||||||||||| |||||| ||||||||||| ||||||||||    
T  12805117 tgtttagatgtttgcatgtttatgttgtagttttgagttttag 12805159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 27661835 - 27661769
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | |||||||||| |||||  || ||||||||||||||||||||| |||||||    
T  27661835 ttatgaattttagagtctatgtataatgtgcacatcatgtgtttgatgaaatgtttgaaagagtttt 27661769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 102
Target Start/End: Original strand, 38853927 - 38853973
Alignment:
Q  56 gtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||| |||||  |||||||| |||||||||||||||||||||||    
T  38853927 gtataatgtgcacatcaagtgttcgatgaaatgtttgaatgagtttt 38853973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 23229235 - 23229195
Alignment:
Q  2 taattgtttagatgtttacatgttaatgttgtagttatgag 42  Q
    ||||||||||||| ||| |||||| ||||||||||||||||    
T  23229235 taattgtttagatatttgcatgtttatgttgtagttatgag 23229195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 2e-43; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 20759629 - 20759528
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20759629 ttaattgtttagatgtttgcatgtttatgttgtagttatgagttttagggtttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 20759530  T
Q  101 tt 102  Q
    ||    
T  20759529 tt 20759528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 20766020 - 20765919
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20766020 ttaattgtttagatgtttgcatgtttatgttgtagttatgagttttagggtttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 20765921  T
Q  101 tt 102  Q
    ||    
T  20765920 tt 20765919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 3393019 - 3393116
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgag 98  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  3393019 ttaattgtttagatgtttgcatgttaatgttgtagttatgagttttagggtttatgtataagttgcacttcaagtgtttgatgaaatgtttgaatgag 3393116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 6 - 102
Target Start/End: Complemental strand, 20779356 - 20779260
Alignment:
Q  6 tgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  20779356 tgtttggatgtttgcatgttaatgttgtagttatgagttttagggtttatgtataatttgcactccaagtgtttgatgaactgtttgaatgagtttt 20779260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 21711280 - 21711376
Alignment:
Q  6 tgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  21711280 tgtttggatgtttgcatgttaatgttgtagttatgagttttagggtttatgtataatttgcactccaagtgtttgatgaattgtttgaatgagtttt 21711376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 6 - 102
Target Start/End: Complemental strand, 32938389 - 32938293
Alignment:
Q  6 tgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||| ||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32938389 tgtttggatgtttgcatgttaatgttgtcgttatgagttttagggtttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 32938293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 31323889 - 31323990
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||| ||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  31323889 ttaaatgtttagatgtttgcatgtttatgttgtagttatgagttttagggtttatgtataatttgcactccaaatgtttgatgaaatatttgaatgagtt 31323988  T
Q  101 tt 102  Q
    ||    
T  31323989 tt 31323990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 6 - 102
Target Start/End: Complemental strand, 14331181 - 14331085
Alignment:
Q  6 tgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  14331181 tgtttggatgtttgcatgttaatgttgtagttatgaattttagggtttatgtataatttgcactccaagtgtttgatgaattgtttgaatgagtttt 14331085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 102
Target Start/End: Complemental strand, 23125021 - 23124923
Alignment:
Q  4 attgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||||||||||| ||| || || |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  23125021 attgtttagatgtttccatatttatattgtagttatgagttttagggtttatgtatattttgcactccaagtgtttgatgaaatgtttgaatgagtttt 23124923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 49063700 - 49063796
Alignment:
Q  6 tgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||| ||||||| ||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  49063700 tgtttggatgtttgcatgttaatattgtagttatgagttttagggtttatgtataattttcactccaagtgtttgatgaattgtttgaatgagtttt 49063796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 42420759 - 42420858
Alignment:
Q  3 aattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||| |||| | ||| ||||||||||||||||||||||||||    
T  42420759 aattgtttagatgtttgcatgtttatgttgtagttatgagttttagggtttatgtataattttcacttccagtatttgatgaaatgtttgaatgagtttt 42420858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 1225875 - 1225976
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||| ||||||||||| |||||| || |||||||||| | ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  1225875 ttaattatttagatgtttgcatgtttatattgtagttatcatttttagggtttatgaataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 1225974  T
Q  101 tt 102  Q
    ||    
T  1225975 tt 1225976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 33164036 - 33163935
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||| ||||||||||| |||||| ||||||||||||| | ||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  33164036 ttaattatttagatgtttgcatgttcatgttgtagttatcatttttagggtttatgtataatttgcactccaagtgtttgataaaatgttggaatgagtt 33163937  T
Q  101 tt 102  Q
    ||    
T  33163936 tt 33163935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 17210987 - 17211082
Alignment:
Q  6 tgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||||||||||  |||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  17210987 tgtttagatgtttgtatgttaattttgtagttatgagttttagg-tttatgtataatttgcacttcaagtgtttgatgaaatgtttgtatgagtttt 17211082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 2 - 102
Target Start/End: Original strand, 31931298 - 31931398
Alignment:
Q  2 taattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagttt 101  Q
    ||||||||||||||||| ||||||  ||||||||| |||||||||||  ||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  31931298 taattgtttagatgtttgcatgtttgtgttgtagtcatgagttttagagtttatatataatttgcactccaagtgtttgatgagatgtttgaatgagttt 31931397  T
Q  102 t 102  Q
    |    
T  31931398 t 31931398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 13850464 - 13850565
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||| ||||||||||||  |||| | ||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||| ||||||||||||||    
T  13850464 ttaaatgtttagatgttcgcatgcttatgttgtagttatgagttttagggtttatgtataatttgcacttcaaatgtttgatgaattgtttgaatgagtt 13850563  T
Q  101 tt 102  Q
    ||    
T  13850564 tt 13850565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 18412310 - 18412411
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    ||||||||||| |||||| ||| || ||||||||||||||||||||||| ||||| |||| ||| |||||||||||||||| ||||||||||| ||||||    
T  18412310 ttaattgtttacatgtttgcatttttatgttgtagttatgagttttagggtttatttatatttttcactccaagtgtttgacgaaatgtttgattgagtt 18412409  T
Q  101 tt 102  Q
    ||    
T  18412410 tt 18412411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 24606472 - 24606568
Alignment:
Q  6 tgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||| ||||||| ||| |||||||||||||||||||||||| | ||||||||  |||| | |||||||||||||||||||||||||||||||||||    
T  24606472 tgtttggatgtttgcatattaatgttgtagttatgagttttaaggtttatgtaagatttactctccaagtgtttgatgaaatgtttgaatgagtttt 24606568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 3510906 - 3510820
Alignment:
Q  16 tttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||||||| ||||| ||||| | ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  3510906 tttacatgtttatgttttagtttttagttttagggtttatgtatattttgcactccaagtgtttgatgaaatgtttgaatgaatttt 3510820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 102
Target Start/End: Original strand, 24074857 - 24074922
Alignment:
Q  37 tatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24074857 tatgatttttagggtttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 24074922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 44100060 - 44100161
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||| ||||||||||||| |||| | || |||||| | | |||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  44100060 ttaaatgtttagatgtttgcatgcttattttgtagattttagtttttgggtttatgtataatttgtactccaagtgtttgatgaaatgtttgaatgagtt 44100159  T
Q  101 tt 102  Q
    ||    
T  44100160 tt 44100161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 12587374 - 12587463
Alignment:
Q  13 atgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||||||||| ||||| ||||| | |||||| |  |||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  12587374 atgtttacatgtttatgttttagtttttagttttggagtttatgtatattttgcactccaagtgtttgatgaaatgtttgaatgaatttt 12587463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 21 - 102
Target Start/End: Original strand, 25144232 - 25144312
Alignment:
Q  21 atgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||| |||||  |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  25144232 atgtttatgttacagttatgatttttagg-tttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgtgtttt 25144312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 31825101 - 31825020
Alignment:
Q  21 atgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||| ||||||||||||| | ||||||| ||||||||||||||||||||| |||||||||| ||||||| |||||||||||    
T  31825101 atgtttatgttgtagttatcatttttagggtttatgtataatttgcactccgagtgtttgataaaatgttggaatgagtttt 31825020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 46817011 - 46816918
Alignment:
Q  8 tttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagttt 101  Q
    ||||||||||| |||||| ||||||||||||| | | ||||| ||||||||||||||||||||||| |||||||| ||||||| ||||| ||||    
T  46817011 tttagatgtttgcatgtttatgttgtagttatcattattagggtttatgtataatttgcactccaaatgtttgataaaatgttggaatgcgttt 46816918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 17291702 - 17291770
Alignment:
Q  33 tagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagttt 101  Q
    ||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  17291702 tagttatgatttttagggtttatgtataatttgaactccaagtgtttgatgaaatgtttaaatgagttt 17291770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 13865989 - 13866069
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttga 81  Q
    |||| ||||||||||||  |||| | ||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||    
T  13865989 ttaaatgtttagatgttcgcatgcttatgttgtagttatgagttttagggtttctgtataatttgcactccaaatgtttga 13866069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 23950451 - 23950517
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||    
T  23950451 ttatgatttttagggtttatgtataatttgcactaaaagtgtttgatgaaatgtttgaatgactttt 23950517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 11866607 - 11866532
Alignment:
Q  27 atgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||| ||||| | ||||||||| |||||||||||||| |||||||| |||| ||||||||||||||| |||||||    
T  11866607 atgttatagtttttagttttagggtttatgtataatttacactccaaatgttcgatgaaatgtttgaacgagtttt 11866532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 242873 - 242807
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | ||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  242873 ttatgatttttagtgtctatgtataatttgcacatcaagtgtttgatgaaatgtttgaatgagtttt 242807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 957912 - 957846
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | ||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  957912 ttatgatttttagagtctatgtataatttgcacatcaagtgtttgatgaaatgtttgaatgagtttt 957846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 29699771 - 29699705
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | ||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  29699771 ttatgatttttagagtctatgtataatttgcacatcaagtgtttgatgaaatgtttgaatgagtttt 29699705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 9489446 - 9489495
Alignment:
Q  53 tatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  9489446 tatgtataatttgcacatcaagtgtttgatgaaatgtttgaatgagtttt 9489495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 51428631 - 51428582
Alignment:
Q  53 tatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  51428631 tatgtataatttgcacatcaagtgtttgatgaaatgtttgaatgagtttt 51428582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 21412975 - 21412916
Alignment:
Q  43 ttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||| ||| |||||||||||||||||||  |||||||||||||||||||||| ||||    
T  21412975 ttttagggtttgtgtataatttgcactccaaaagtttgatgaaatgtttgaatgaatttt 21412916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 1042501 - 1042567
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | |||||||||| |||||  ||||||||||||||||||||||||||||||||    
T  1042501 ttatgaattttagagtctatgtataatgtgcacatcaagtgtttgatgaaatgtttgaatgagtttt 1042567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 6282780 - 6282714
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | |||||||||||||||   ||||||||||||||||||||||||||||||||    
T  6282780 ttatgatttttagagtctatgtataatttgcatatcaagtgtttgatgaaatgtttgaatgagtttt 6282714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 34153728 - 34153679
Alignment:
Q  53 tatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||||||||||||  |||||||||||||||||| |||||||||||||    
T  34153728 tatgtataatttgcacatcaagtgtttgatgaaatgattgaatgagtttt 34153679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 44560620 - 44560571
Alignment:
Q  53 tatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||    
T  44560620 tatgtataatttgcatatcaagtgtttgatgaaatgtttgaatgagtttt 44560571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 49424199 - 49424150
Alignment:
Q  53 tatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||||||| |||||  ||||||||||||||||||||||||||||||||    
T  49424199 tatgtataatgtgcacatcaagtgtttgatgaaatgtttgaatgagtttt 49424150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 11288044 - 11288111
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtg-tttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||| |||||||||||||| |||  |||||| ||||| ||||||||||||||||||||    
T  11288044 ttatgatttttagggtttatgtataatttacacatcaagtgttttgacgaaatgtttgaatgagtttt 11288111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 14331331 - 14331284
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttag 48  Q
    |||| ||||||||||||| |||||||||||||||||| ||||||||||    
T  14331331 ttaaatgtttagatgtttgcatgttaatgttgtagttttgagttttag 14331284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 102
Target Start/End: Original strand, 28082007 - 28082054
Alignment:
Q  55 tgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||||| |||||  ||||||||||||||||||||||||||||||||    
T  28082007 tgtataatgtgcacatcaagtgtttgatgaaatgtttgaatgagtttt 28082054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 21017634 - 21017568
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | |||||||||| |||||  |||||||| |||||||||||||||||||||||    
T  21017634 ttatgaattttagagtctatgtataatgtgcacatcaagtgttcgatgaaatgtttgaatgagtttt 21017568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 10312047 - 10312096
Alignment:
Q  51 tttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||||| ||||| || | ||||||||||||||||||||||||||||||    
T  10312047 tttatgtaaaattttcagtgcaagtgtttgatgaaatgtttgaatgagtt 10312096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 103
Target Start/End: Complemental strand, 893533 - 893501
Alignment:
Q  71 caagtgtttgatgaaatgtttgaatgagtttta 103  Q
    |||||||||||||||||||||||||||||||||    
T  893533 caagtgtttgatgaaatgtttgaatgagtttta 893501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 21711134 - 21711181
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttag 48  Q
    |||| ||||||||||||| |||||| ||||||||||| ||||||||||    
T  21711134 ttaaatgtttagatgtttgcatgtttatgttgtagttttgagttttag 21711181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 24606331 - 24606378
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttag 48  Q
    |||| ||||||||||||| |||||| ||||||||||| ||||||||||    
T  24606331 ttaaatgtttagatgtttgcatgtttatgttgtagttttgagttttag 24606378  T

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Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 49063559 - 49063606
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttag 48  Q
    |||| ||||||||||||| |||||| ||||||||||| ||||||||||    
T  49063559 ttaaatgtttagatgtttgcatgtttatgttgtagttttgagttttag 49063606  T

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Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 102
Target Start/End: Complemental strand, 13181733 - 13181687
Alignment:
Q  56 gtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||| |||||  ||||||||||||||||||||| ||||||||||    
T  13181733 gtataatgtgcacatcaagtgtttgatgaaatgttttaatgagtttt 13181687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 102
Target Start/End: Original strand, 55794378 - 55794424
Alignment:
Q  56 gtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||| |||||  |||||||| |||||||||||||||||||||||    
T  55794378 gtataatgtgcacatcaagtgttcgatgaaatgtttgaatgagtttt 55794424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 20779418 - 20779381
Alignment:
Q  6 tgtttagatgtttacatgttaatgttgtagttatgagt 43  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  20779418 tgtttggatgtttgcatgttaatgttgtagttatgagt 20779381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 34530236 - 34530187
Alignment:
Q  53 tatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||||||| |||||   | |||||||||||||||||||||||||||||    
T  34530236 tatgtataatgtgcacattatgtgtttgatgaaatgtttgaatgagtttt 34530187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 39588696 - 39588745
Alignment:
Q  53 tatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||||||| |||||   || ||||||||||||||||||||||||||||    
T  39588696 tatgtataatgtgcacattaactgtttgatgaaatgtttgaatgagtttt 39588745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 8351896 - 8351848
Alignment:
Q  54 atgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||| || ||||| || ||||||||||||||| |||||||||||||    
T  8351896 atgtatatttagcactacatgtgtttgatgaaatgcttgaatgagtttt 8351848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 17210852 - 17210892
Alignment:
Q  8 tttagatgtttacatgttaatgttgtagttatgagttttag 48  Q
    ||||||||||| |||||| ||||||||||| ||||||||||    
T  17210852 tttagatgtttgcatgtttatgttgtagttttgagttttag 17210892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 42886024 - 42886079
Alignment:
Q  46 taggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||| ||||||||||||||||||   |||| ||||||||||||||||||||| ||||    
T  42886024 tagggtttatgtataatttgcacat-aagtttttgatgaaatgtttgaatgaatttt 42886079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 88; Significance: 3e-42; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 12505208 - 12505109
Alignment:
Q  3 aattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12505208 aattgtttagatgtttgcatgtttatgttgtagttatgagttttagggtttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 12505109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 16575422 - 16575518
Alignment:
Q  6 tgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||| |||||||  ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  16575422 tgtttggatgtttgtatgttaatgttgtagttatgagttttagggtttatgtataatttacactccaagtgtttgatgaaatgtttgaatgagtttt 16575518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 43692867 - 43692963
Alignment:
Q  6 tgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  43692867 tgtttggatgtttgcatgttaatgttgtagttatgagttttagggtttatgtataatttgcattccaagtgtttgatgaattgtttgaatgagtttt 43692963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 21 - 102
Target Start/End: Original strand, 8751512 - 8751593
Alignment:
Q  21 atgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  8751512 atgtttatgttgtagttatgagttttagggtttatgtataatttgcactccaagtgtttgatcaaatgtttgaatgagtttt 8751593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 22843829 - 22843728
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||| ||||||||||||| |||||| ||||||||||| | ||||||||| |||||||||||||||||||||||||||  ||||||||| |||||||||||    
T  22843829 ttaaatgtttagatgtttgcatgtttatgttgtagtttttagttttagggtttatgtataatttgcactccaagtgtccgatgaaatgcttgaatgagtt 22843730  T
Q  101 tt 102  Q
    ||    
T  22843729 tt 22843728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 27783183 - 27783272
Alignment:
Q  13 atgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| |||||| || |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  27783183 atgtttgcatgtttatattgtagttatgagttttagggtttatgtataatttgcactctaagtgtttgatgaaatgttagaatgagtttt 27783272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 28706631 - 28706530
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||| ||||||||||| |||||| ||||||||||||| | ||||||| |||||||||||||||||||||||||||||||| |||||||||  ||||||    
T  28706631 ttaattatttagatgtttgcatgtttatgttgtagttatcatttttagggtttatgtataatttgcactccaagtgtttgataaaatgtttgtttgagtt 28706532  T
Q  101 tt 102  Q
    ||    
T  28706531 tt 28706530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 40414340 - 40414437
Alignment:
Q  6 tgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtg-tttgatgaaatgtttgaatgagtttt 102  Q
    ||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||  |||| ||||||||||||||||    
T  40414340 tgtttggatgtttgcatgttaatgttgtagttatgagttttagggtttatgtataatttgcactccaagtgtttttttgaattgtttgaatgagtttt 40414437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 43640508 - 43640407
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||| ||||||||||| |||||| ||||||||||||| | ||||||| |||||||||||||||||||||||||||||||| |||| || |||||||||    
T  43640508 ttaattatttagatgtttgcatgtttatgttgtagttatcatttttagggtttatgtataatttgcactccaagtgtttgataaaatattggaatgagtt 43640409  T
Q  101 tt 102  Q
    ||    
T  43640408 tt 43640407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 3589723 - 3589642
Alignment:
Q  21 atgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||| ||||| ||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  3589723 atgtttatgttatagttatgatttttagggtttatgtataatttgtactccaagtgtttgatgaaatgtttgaatgaatttt 3589642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 24630379 - 24630278
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||||||||||||||| |||||| ||||||||||| | || |||| | ||||| ||||| || |||||||||||||||||||||| ||||||||||||    
T  24630379 ttaattgtttagatgtttgcatgtttatgttgtagtttttaggtttatgctttatatataactttcactccaagtgtttgatgaaatatttgaatgagtt 24630280  T
Q  101 tt 102  Q
    ||    
T  24630279 tt 24630278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 33 - 102
Target Start/End: Complemental strand, 31172273 - 31172204
Alignment:
Q  33 tagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  31172273 tagttatgatttttagggtttatgtataatttacactccaagtgtttgatgaaatgtttgaatgattttt 31172204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 32109417 - 32109316
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||| |||||||||| ||||||| | ||||| ||||| | ||||||||  |||||||||| |||||| |||||||||||| |||||||||||||||||||    
T  32109417 ttaagtgtttagatgcttacatgcttatgttttagtttttagttttagagtttatgtatattttgcattccaagtgtttggtgaaatgtttgaatgagtt 32109318  T
Q  101 tt 102  Q
    ||    
T  32109317 tt 32109316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 12785701 - 12785607
Alignment:
Q  8 tttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||||||| |||||| ||||||| ||| | || |||||| |||| ||||| |||||||||||| ||||||||||||||||| ||||||||||    
T  12785701 tttagatgtttgcatgtttatgttgttgtttttagctttagggtttaagtatattttgcactccaattgtttgatgaaatgttttaatgagtttt 12785607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 42603229 - 42603280
Alignment:
Q  51 tttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  42603229 tttatgtataatttgcacatcaagtgtttgatgaaatgtttgaatgagtttt 42603280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 18440749 - 18440683
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | ||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  18440749 ttatgatttttagagtctatgtataatttgcacatcaagtgtttgatgaaatgtttgaatgagtttt 18440683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 37780403 - 37780469
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | ||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  37780403 ttatgatttttagagtctatgtataatttgcacatcaagtgtttgatgaaatgtttgaatgagtttt 37780469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 40702137 - 40702186
Alignment:
Q  53 tatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  40702137 tatgtataatttgcacatcaagtgtttgatgaaatgtttgaatgagtttt 40702186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 41857411 - 41857362
Alignment:
Q  53 tatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  41857411 tatgtataatttgcacatcaagtgtttgatgaaatgtttgaatgagtttt 41857362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 24861103 - 24861169
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | |||||||||| |||||  ||||||||||||||||||||||||||||||||    
T  24861103 ttatgaattttagagtatatgtataatgtgcacatcaagtgtttgatgaaatgtttgaatgagtttt 24861169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 26452085 - 26452151
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | |||||||||| |||||  ||||||||||||||||||||||||||||||||    
T  26452085 ttatgaattttagagtctatgtataatgtgcacatcaagtgtttgatgaaatgtttgaatgagtttt 26452151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 41275154 - 41275220
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | |||||||||| |||||  ||||||||||||||||||||||||||||||||    
T  41275154 ttatgaattttagagtctatgtataatgtgcacatcaagtgtttgatgaaatgtttgaatgagtttt 41275220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 33799995 - 33799939
Alignment:
Q  46 taggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||| |||||||||||||||||||| | ||||||||| ||||||| |||||||||||    
T  33799995 tagggtttatgtataatttgcactctaggtgtttgataaaatgttggaatgagtttt 33799939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 2416675 - 2416738
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagt 99  Q
    |||||| ||||||  | |||||||||| |||||  |||||||||||||||||||||||||||||    
T  2416675 ttatgaattttagagtctatgtataatgtgcacatcaagtgtttgatgaaatgtttgaatgagt 2416738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 44943517 - 44943468
Alignment:
Q  53 tatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||||||||||||  |||||| |||||||||||||||||| ||||||    
T  44943517 tatgtataatttgcacatcaagtgcttgatgaaatgtttgaattagtttt 44943468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 14998607 - 14998561
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagtttta 47  Q
    ||||||| |||||||||| |||||| |||||| ||||||||||||||    
T  14998607 ttaattggttagatgtttgcatgtttatgttgaagttatgagtttta 14998561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 96
Target Start/End: Complemental strand, 26172269 - 26172227
Alignment:
Q  54 atgtataatttgcactccaagtgtttgatgaaatgtttgaatg 96  Q
    ||||||| || |||||||||||||||||||||||| |||||||    
T  26172269 atgtatatttagcactccaagtgtttgatgaaatgcttgaatg 26172227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 103
Target Start/End: Complemental strand, 15032760 - 15032711
Alignment:
Q  54 atgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttta 103  Q
    ||||||||| |||||  ||||||||  |||||||||||||||||||||||    
T  15032760 atgtataatgtgcacatcaagtgttcaatgaaatgtttgaatgagtttta 15032711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 43692726 - 43692771
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagtttt 46  Q
    |||| ||||||||||||| |||||| ||||||||||| ||||||||    
T  43692726 ttaaatgtttagatgtttgcatgtttatgttgtagttttgagtttt 43692771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 86; Significance: 4e-41; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 12082641 - 12082742
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12082641 ttaattgtttagatgtttgcatgtttatgttgtagttatgagttttatggtttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 12082740  T
Q  101 tt 102  Q
    ||    
T  12082741 tt 12082742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 11824399 - 11824500
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||| |||||||||||||||||    
T  11824399 ttaattgtttagatgtttgcatgtttatgttgtagttatgagttttagggtttatgtataatttgcagtccaggtgtttgataaaatgtttgaatgagtt 11824498  T
Q  101 tt 102  Q
    ||    
T  11824499 tt 11824500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 16886985 - 16886888
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgag 98  Q
    |||||||||||||||||| |||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16886985 ttaattgtttagatgtttgcatgtttatgttgtagttttgagttttagggtttatgtataatttgcactccaagtgtttgatgaaatgtttaaatgag 16886888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 2356006 - 2356107
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||| ||||||||||| |||||| ||||||||||||| | ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2356006 ttaattatttagatgtttgcatgtttatgttgtagttatcatttttagggtttatgtataatttgcactccaagtatttgatgaaatgtttgaatgagtt 2356105  T
Q  101 tt 102  Q
    ||    
T  2356106 tt 2356107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 12310074 - 12309986
Alignment:
Q  14 tgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||| |||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12310074 tgtttgcatgtttatgttgtagttttgagttttagggtttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 12309986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 26926231 - 26926327
Alignment:
Q  6 tgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||||||||| |||||| |||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  26926231 tgtttagatgttttcatgtttatgttgaagtttttagttttaggatttatgtataatttgcactccaagtgtttgatgaaatatttgaatgagtttt 26926327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 18237280 - 18237381
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||| ||||||||||| |||||| ||||||||||||| | ||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  18237280 ttaattatttagatgtttgcatgtttatgttgtagttatcatttttagggtttatgtataatttgcactccaagtgtttgataaaatgttggaatgagtt 18237379  T
Q  101 tt 102  Q
    ||    
T  18237380 tt 18237381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 30360234 - 30360335
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||| ||||||||||| |||||| ||||||||||||| | ||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  30360234 ttaattatttagatgtttgcatgtttatgttgtagttatcatttttagggtttatgtataatttgcactccaagtgtttgataaaatgttggaatgagtt 30360333  T
Q  101 tt 102  Q
    ||    
T  30360334 tt 30360335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 41217326 - 41217427
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||| ||||||||||| |||||| ||||||||||||| | ||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  41217326 ttaattatttagatgtttgcatgtttatgttgtagttatcatttttagggtttatgtataatttgcactccaagtgtttgataaaatgttggaatgagtt 41217425  T
Q  101 tt 102  Q
    ||    
T  41217426 tt 41217427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 7066456 - 7066544
Alignment:
Q  13 atgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagttt 101  Q
    |||||| || ||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7066456 atgtttgcaagtttatgttgtagttttgagttttagggtttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagttt 7066544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 7414498 - 7414397
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||||||||||| ||| |||||| | ||||||||||||||||||||  ||||||||||||||  |||| |||||||||||||||||||||||||||||    
T  7414498 ttaattgtttagatatttgcatgtttacgttgtagttatgagttttagagtttatgtataatttttactcgaagtgtttgatgaaatgtttgaatgagtt 7414399  T
Q  101 tt 102  Q
    ||    
T  7414398 tt 7414397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 8726708 - 8726611
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgag 98  Q
    ||||||| |||||||||| |||||| ||||||||||||||||||||||| | ||||||||||||||||| |||||||||| | |||||||||||||||    
T  8726708 ttaattgcttagatgttttcatgtttatgttgtagttatgagttttagggtatatgtataatttgcacttcaagtgtttgcttaaatgtttgaatgag 8726611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 26603695 - 26603594
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||| ||| ||||||| |||||| ||||||||||||| | ||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  26603695 ttaattattttgatgtttgcatgtttatgttgtagttatcatttttagggtttatgtataatttgcactccaagtgtttgataaaatgttggaatgagtt 26603596  T
Q  101 tt 102  Q
    ||    
T  26603595 tt 26603594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 27318325 - 27318225
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||  |||||| ||||||||||||||| ||||||||||||| |||||||||| ||    
T  27318325 ttaattgtttagatgtttgcatgtttatgttgtagttatgagttttagagtttatgcataatttgcactccatgtgtttgatgaaa-gtttgaatgaatt 27318227  T
Q  101 tt 102  Q
    ||    
T  27318226 tt 27318225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 28065966 - 28066066
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||||||||||| ||| |||||| |||||||||| |||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||| |||    
T  28065966 ttaattgtttagat-tttgcatgtttatgttgtagtaatgagttttagggtttatgtataatttgcacttcaagtgtttgattaaatgtttgaatgggtt 28066064  T
Q  101 tt 102  Q
    ||    
T  28066065 tt 28066066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 47268627 - 47268728
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||| | ||||||||| |||||| ||||||||||||| | ||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  47268627 ttaattatctagatgtttgcatgtttatgttgtagttatcatttttagggtttatgtataatttgcactccaagtgtttgataaaatgttggaatgagtt 47268726  T
Q  101 tt 102  Q
    ||    
T  47268727 tt 47268728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 102
Target Start/End: Complemental strand, 21615245 - 21615149
Alignment:
Q  6 tgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    | ||||||||||||||||    
T  21615245 tgtttggatgtttgcatgttaatgttgtagttatgagttttagggtttatgtataatttgcactccaagtgtttggctcattgtttgaatgagtttt 21615149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 7061965 - 7062054
Alignment:
Q  13 atgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| || ||| ||||||||||| ||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  7061965 atgtttgcaagtttatgttgtagttttgagttttagtgtttatgtataatttgcactccaagtgtttaatgaaatgtttgaatgagtttt 7062054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 20379176 - 20379075
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||| ||||||||||| |||||| ||||||||||||| | ||||||| |||||||||||||||||||||||| ||||||| ||||||| ||||| |||    
T  20379176 ttaattatttagatgtttgcatgtttatgttgtagttatcatttttagggtttatgtataatttgcactccaagcgtttgataaaatgttggaatgcgtt 20379077  T
Q  101 tt 102  Q
    ||    
T  20379076 tt 20379075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 48221232 - 48221131
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||| ||||||||||| |||||| ||||||||||||| | ||||| | ||||||||||||||| |||||||||||||||| ||||||| |||||||||    
T  48221232 ttaattatttagatgtttgcatgtttatgttgtagttatcatttttaaggtttatgtataatttgtactccaagtgtttgataaaatgttggaatgagtt 48221133  T
Q  101 tt 102  Q
    ||    
T  48221132 tt 48221131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 149805 - 149899
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||||||||||||||| ||||||       |||||||||| |||||| |||||||||| | |||||||||||||||||||||||||||||||||||||    
T  149805 ttaattgtttagatgtttgcatgtt-------tagttatgagctttagggtttatgtatattatgcactccaagtgtttgatgaaatgtttgaatgagtt 149897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 18146673 - 18146774
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||| | ||||||||| |||||| || |||||||||||||||||||| | ||| |||| |||| |||||||||||||||| |||||||||||||| ||    
T  18146673 ttaattatatagatgtttgcatgtttatattgtagttatgagttttagggtatatctatattttgaactccaagtgtttgataaaatgtttgaatgactt 18146772  T
Q  101 tt 102  Q
    ||    
T  18146773 tt 18146774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 40592450 - 40592551
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||| ||||||||||| |||||| ||| ||||||||| | ||||||| |||||||||||||| | ||||||||||||||| ||||||| |||| ||||    
T  40592450 ttaattatttagatgtttgcatgtttatgctgtagttatcatttttagggtttatgtataatttaccctccaagtgtttgataaaatgttggaataagtt 40592549  T
Q  101 tt 102  Q
    ||    
T  40592550 tt 40592551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 3381143 - 3381069
Alignment:
Q  27 atgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||| ||||||||| ||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  3381143 atgttatagttatga-ttttagggtttatgtataattttcactctaagtgtttgatgaaatgtttgaatgagtttt 3381069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 102
Target Start/End: Complemental strand, 1643045 - 1642976
Alignment:
Q  33 tagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||||| ||||||  |||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  1643045 tagttatgatttttagagtttatgtataatttgcactccaggtgtttgatgaaatatttgaatgagtttt 1642976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 102
Target Start/End: Original strand, 3924564 - 3924633
Alignment:
Q  33 tagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| |||| ||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  3924564 tagttaagagtgttagggtttatgtataatttgcacttcaagtgtttgatgaaatgttagaatgagtttt 3924633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 1321772 - 1321685
Alignment:
Q  8 tttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatg 96  Q
    ||||||||||| |||||| || || ||||| || |||||| | |||||||||| |||||||||||||||||||||||||||||||||||    
T  1321772 tttagatgtttgcatgtttatattttagttttg-gttttaaggtttatgtatattttgcactccaagtgtttgatgaaatgtttgaatg 1321685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 48270400 - 48270466
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  ||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  48270400 ttatgatttttagagtttatgtataatttgcacatcaagtgtttgatgaaatgtttgaatgagtttt 48270466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 21650290 - 21650341
Alignment:
Q  51 tttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  21650290 tttatgtataatttgcacatcaagtgtttgatgaaatgtttgaatgagtttt 21650341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 28979478 - 28979412
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | ||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  28979478 ttatgatttttagagtctatgtataatttgcacatcaagtgtttgatgaaatgtttgaatgagtttt 28979412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 34140617 - 34140683
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | |||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  34140617 ttatgaattttagagtctatgtataatgtgcacaccaagtgtttgatgaaatgtttgaatgagtttt 34140683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 36394279 - 36394213
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | ||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  36394279 ttatgatttttagagtctatgtataatttgcacatcaagtgtttgatgaaatgtttgaatgagtttt 36394213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 41048542 - 41048608
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||||||||||  | |||||||||| |||||  ||||||||||||||||||||||||||||||||    
T  41048542 ttatgagttttagagtctatgtataatgtgcacatcaagtgtttgatgaaatgtttgaatgagtttt 41048608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 31267106 - 31267178
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaa 73  Q
    |||||||||||||||||| | |||| ||| |||| |||||||||||||| ||||||||||||||  |||||||    
T  31267106 ttaattgtttagatgtttgcttgtttatgatgtatttatgagttttagggtttatgtataatttatactccaa 31267178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 41935847 - 41935751
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||| ||||||||||| |||||||   |||||||| ||||||||||| ||||| ||| ||  |||||||| || ||||||||||| ||||||||||||    
T  41935847 ttaattatttagatgtttgcatgtta---ttgtagttttgagttttagggtttatatatgat--gcactccatgtatttgatgaaatatttgaatgagtt 41935753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 17839075 - 17839141
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | |||||||||| |||||  ||||||||||||||||||||||||||||||||    
T  17839075 ttatgaattttagagtctatgtataatgtgcacatcaagtgtttgatgaaatgtttgaatgagtttt 17839141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 21187725 - 21187679
Alignment:
Q  53 tatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagt 99  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||    
T  21187725 tatgtataatttgcacatcaagtgtttgatgaaatgtttgaatgagt 21187679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 40588301 - 40588367
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | |||||||||| |||||  ||||||||||||||||||||||||||||||||    
T  40588301 ttatgaattttagagtctatgtataatgtgcacatcaagtgtttgatgaaatgtttgaatgagtttt 40588367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 48315631 - 48315565
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | ||||||||||||||||  ||| ||||||||||||||||||||||||||||    
T  48315631 ttatgatttttagagtctatgtataatttgcacatcaactgtttgatgaaatgtttgaatgagtttt 48315565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 13916586 - 13916652
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | |||||||||  |||||  ||||||||||||||||||||||||||||||||    
T  13916586 ttatgaattttagagtctatgtataacgtgcacatcaagtgtttgatgaaatgtttgaatgagtttt 13916652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 42682708 - 42682774
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | |||||||||| || ||  ||||||||||||||||||||||||||||||||    
T  42682708 ttatgatttttagagtctatgtataatatgaacatcaagtgtttgatgaaatgtttgaatgagtttt 42682774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 45363698 - 45363632
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | |||||||||| |||||   |||||||||||||||||||||||||||||||    
T  45363698 ttatgaattttagagtctatgtataatgtgcacattaagtgtttgatgaaatgtttgaatgagtttt 45363632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 46862632 - 46862586
Alignment:
Q  53 tatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagt 99  Q
    |||||||||| |||||  |||||||||||||||||||||||||||||    
T  46862632 tatgtataatgtgcacatcaagtgtttgatgaaatgtttgaatgagt 46862586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 102
Target Start/End: Complemental strand, 5282628 - 5282583
Alignment:
Q  57 tataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||||||| | |||||||||||| |||||||||||||||||||    
T  5282628 tataatttgcagtgcaagtgtttgataaaatgtttgaatgagtttt 5282583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 95
Target Start/End: Original strand, 28008530 - 28008563
Alignment:
Q  62 tttgcactccaagtgtttgatgaaatgtttgaat 95  Q
    ||||||||||||||||||||||||||||||||||    
T  28008530 tttgcactccaagtgtttgatgaaatgtttgaat 28008563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 101
Target Start/End: Original strand, 16781421 - 16781465
Alignment:
Q  57 tataatttgcactccaagtgtttgatgaaatgtttgaatgagttt 101  Q
    |||| ||||||||| ||||||||||||||||| ||||||||||||    
T  16781421 tatattttgcactcaaagtgtttgatgaaatgcttgaatgagttt 16781465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 8726844 - 8726797
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttag 48  Q
    |||| ||||||||||||| |||||| ||||||||||| ||||||||||    
T  8726844 ttaaatgtttagatgttttcatgtttatgttgtagttttgagttttag 8726797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 39477671 - 39477624
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttag 48  Q
    |||| ||||||||||||| |||||| ||||||||||| ||||||||||    
T  39477671 ttaaatgtttagatgtttgcatgtttatgttgtagttttgagttttag 39477624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 40592315 - 40592362
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttag 48  Q
    |||| ||||||||||||| |||||| ||||||||||| ||||||||||    
T  40592315 ttaaatgtttagatgtttgcatgtttatgttgtagttttgagttttag 40592362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 28114848 - 28114782
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | |||||||||||||| |  ||| ||||||||||||| ||||||||||||||    
T  28114848 ttatgatttttagagtctatgtataatttgcgcatcaaatgtttgatgaaatatttgaatgagtttt 28114782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 102
Target Start/End: Complemental strand, 44110705 - 44110673
Alignment:
Q  70 ccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||||||||||| ||||||||||||||||||    
T  44110705 ccaagtgtttgatgtaatgtttgaatgagtttt 44110673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 4e-41; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 48707407 - 48707306
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  48707407 ttaattgtttagatgtttgcatgtttatgttgtagttatgagttttagggtttatgtataatttgcactccaagtgcttgatgaaatgtttgaatgagtt 48707308  T
Q  101 tt 102  Q
    ||    
T  48707307 tt 48707306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 5764926 - 5765022
Alignment:
Q  6 tgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||||||||| || |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5764926 tgtttagatgtttgcacgttaatgttgtagttatgaggtttagggtttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 5765022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 21485125 - 21485024
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||||||||||||||| |||||| || |||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  21485125 ttaattgtttagatgtttgcatgtttatattgtagttattagttttagggtttatgtataatttgcactgcaagtgtttgatgaaatgtttgaatgagtt 21485026  T
Q  101 tt 102  Q
    ||    
T  21485025 tt 21485024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 21760859 - 21760758
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||||||||||||||| |||||| || |||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  21760859 ttaattgtttagatgtttgcatgtttatattgtagttatgagttttaaggtttatgtataatttgcacttcaagtgtttgatgaaatgtttgaatgagtt 21760760  T
Q  101 tt 102  Q
    ||    
T  21760759 tt 21760758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 6 - 102
Target Start/End: Complemental strand, 30310311 - 30310215
Alignment:
Q  6 tgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||| ||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  30310311 tgtttggatgtttgcatgttaatgttatagttatgagttttagggtttatgtataatttgcactccaagtgtttgatgaattgtttgaatgagtttt 30310215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 6 - 98
Target Start/End: Original strand, 18169745 - 18169837
Alignment:
Q  6 tgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgag 98  Q
    ||||| ||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  18169745 tgtttggatgtttgcatgttaatgttgtagttacgagttttagggtttatgtataatttgcactccaagtgtttgatgaattgtttgaatgag 18169837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 18842159 - 18842255
Alignment:
Q  6 tgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||| ||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  18842159 tgtttggatgtttgcatgttaatattgtagttatgagttttagggtttatgtataatttgcactccaggtgtttgatgaaatatttgaatgagtttt 18842255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 27035808 - 27035707
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||| ||||||||||| |||||| ||||||||||||| | ||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  27035808 ttaattatttagatgtttgcatgtttatgttgtagttatcatttttagggtttatgtataatttgcactccaagtgtttgataaaatgttggaatgagtt 27035709  T
Q  101 tt 102  Q
    ||    
T  27035708 tt 27035707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 34335918 - 34336019
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||| ||||||||||||| ||||||  |||||||||| | | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  34335918 ttaaatgtttagatgtttgcatgtttgtgttgtagtttttaattttaggatttatgtataatttgcactctaagtgtttgatgaaatgtttgaatgagtt 34336017  T
Q  101 tt 102  Q
    ||    
T  34336018 tt 34336019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 39224668 - 39224587
Alignment:
Q  21 atgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  39224668 atgttaatgctgtagttatgagttttagggtttatgtataatttgcactccaagtgtttgatgaattgtttgaatgagtttt 39224587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 48568900 - 48568799
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||| ||||||||||| |||||| ||||||||||||| | ||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  48568900 ttaattatttagatgtttgcatgtttatgttgtagttatcatttttagggtttatgtataatttgcactccaagtgtttgataaaatgttggaatgagtt 48568801  T
Q  101 tt 102  Q
    ||    
T  48568800 tt 48568799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 49599354 - 49599253
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||| ||||||||||| |||||| ||||||||||||| | ||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  49599354 ttaattatttagatgtttgcatgtttatgttgtagttatcatttttagggtttatgtataatttgcactccaagtgtttgataaaatgttggaatgagtt 49599255  T
Q  101 tt 102  Q
    ||    
T  49599254 tt 49599253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 50068750 - 50068649
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||||||||||||||| |||||| ||||||||||||| | ||||||| |||||| ||||||||||||||||||||||||| ||||||| |||||||||    
T  50068750 ttaattgtttagatgtttgcatgtttatgttgtagttatcatttttagggtttatgcataatttgcactccaagtgtttgataaaatgttggaatgagtt 50068651  T
Q  101 tt 102  Q
    ||    
T  50068650 tt 50068649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 41875380 - 41875279
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||| ||||||||||| |||||| ||||||||||||| | ||||||| |||||||||||||| ||||||||||||||||| ||||||| |||||||||    
T  41875380 ttaattatttagatgtttgcatgtttatgttgtagttatcatttttagggtttatgtataattttcactccaagtgtttgataaaatgttggaatgagtt 41875281  T
Q  101 tt 102  Q
    ||    
T  41875280 tt 41875279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 46182044 - 46181943
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||| ||||||||||| |||||| ||||||||||||| | ||||||| ||||||| |||||||||||||||||||||||| ||||||| |||||||||    
T  46182044 ttaattatttagatgtttgcatgtttatgttgtagttatcatttttagggtttatgtttaatttgcactccaagtgtttgataaaatgttggaatgagtt 46181945  T
Q  101 tt 102  Q
    ||    
T  46181944 tt 46181943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 12026255 - 12026351
Alignment:
Q  6 tgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||||||||| |||||| ||||||||||| | ||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||| ||||    
T  12026255 tgtttagatgtttgcatgtttatgttgtagttcttagttttagggtttatgtataattttcacttcaagtgtttgatgaaatgtttgaatgactttt 12026351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 27259646 - 27259745
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||| ||||||||||| |||||  ||||||||||| ||||||||||| |||| ||||||||| | |||||||||||||||||||||||||||||||||    
T  27259646 ttaattatttagatgtttgcatgt--atgttgtagttgtgagttttagggtttacgtataattttccctccaagtgtttgatgaaatgtttgaatgagtt 27259743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 26793042 - 26793124
Alignment:
Q  20 catgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||||||| | ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  26793042 catgtttatgttgtagtttttagttttagggtttatgtataatttgtactccaagtgtttgatgaaatgtttgaatgaatttt 26793124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 25804056 - 25803956
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    ||||||||||| |||||| |||||| |||| ||| || ||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  25804056 ttaattgtttaaatgtttgcatgtttatgt-gtacttttgagttttagagtttatgtataagttgcactccaagtgtttgatgaaatgtttgaatgcgtt 25803958  T
Q  101 tt 102  Q
    ||    
T  25803957 tt 25803956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 31452214 - 31452139
Alignment:
Q  27 atgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||| || |||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  31452214 atgttataattatgatttttagggtttatgtataatttgcactctaagtgtttgatgaaatgtttgaatgagtttt 31452139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 102
Target Start/End: Complemental strand, 19262849 - 19262767
Alignment:
Q  20 catgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||| ||||||||| ||||||  ||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  19262849 catgttcatgttatagttatgatttttagagtttatgtataatttgcatttcaagtgtttgatgaaatgtttgaatgagtttt 19262767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 24364224 - 24364158
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  24364224 ttatgatttttagggtttatgtataatttacactccaagtgtttgatgaaatgtttgaatgagtttt 24364158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 16532490 - 16532431
Alignment:
Q  43 ttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  16532490 ttttagggtttatgtataatttgcactccaagtgtttgatgaaatgtttgactgagtttt 16532431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 16098386 - 16098321
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  16098386 ttatgatttttagggtttatgtataatt-gcactccaagtgtttgatgaaatgtttgaatgagtttt 16098321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 17696764 - 17696862
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||| ||||||||||| |||||| ||||||||||||| | ||||||| ||||||||||||||||||||  | |  |||||||||||||||||||||||    
T  17696764 ttaattatttagatgtttgcatgtttatgttgtagttatcatttttagggtttatgtataatttgcactc--act-cttgatgaaatgtttgaatgagtt 17696860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 39900356 - 39900298
Alignment:
Q  41 agttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagt 99  Q
    ||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||    
T  39900356 agttttagggtttatgtatattttgcactacaagtgtttgatgaaatgtttgaatgagt 39900298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 41 - 102
Target Start/End: Original strand, 27799412 - 27799473
Alignment:
Q  41 agttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||| | |||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  27799412 agttttaaggtttatgtataatttgcactccaagtgattgctgaaatgtttgaatgagtttt 27799473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 16077565 - 16077624
Alignment:
Q  43 ttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||| ||||||||||||||||| | || |||||||||||||||||||||||||||||    
T  16077565 ttttagggtttatgtataatttgcattacaggtgtttgatgaaatgtttgaatgagtttt 16077624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 3658373 - 3658431
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtat 59  Q
    |||||||||||||| ||| |||||| ||||||||||||||||||||||| |||||||||    
T  3658373 ttaattgtttagatatttgcatgtttatgttgtagttatgagttttagggtttatgtat 3658431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 49396454 - 49396520
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | ||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  49396454 ttatgatttttagagtctatgtataatttgcacatcaagtgtttgatgaaatgtttgaatgagtttt 49396520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 4209018 - 4209067
Alignment:
Q  53 tatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  4209018 tatgtataatttgcacatcaagtgtttgatgaaatgtttgaatgagtttt 4209067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 13972692 - 13972741
Alignment:
Q  53 tatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  13972692 tatgtataatttgcacatcaagtgtttgatgaaatgtttgaatgagtttt 13972741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 13283464 - 13283523
Alignment:
Q  43 ttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||| |||||||| ||||| |||| ||||||||||||| ||||||||||||||||||    
T  13283464 ttttagggtttatgtaaaattttcactacaagtgtttgatggaatgtttgaatgagtttt 13283523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 27487145 - 27487079
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | |||||||||| |||||  ||||||||||||||||||||||||||||||||    
T  27487145 ttatgaattttagagtctatgtataatgtgcacatcaagtgtttgatgaaatgtttgaatgagtttt 27487079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 29435723 - 29435789
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | ||||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  29435723 ttatgatttttagagtctatgtataatttgcacatcaagtctttgatgaaatgtttgaatgagtttt 29435789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 36909311 - 36909377
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | |||||||||| |||||  ||||||||||||||||||||||||||||||||    
T  36909311 ttatgatttttagagtctatgtataatgtgcacatcaagtgtttgatgaaatgtttgaatgagtttt 36909377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 41780443 - 41780509
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | ||||||||||||||||  ||||||||||||||||||||||||| ||||||    
T  41780443 ttatgatttttagagtctatgtataatttgcacatcaagtgtttgatgaaatgtttgaataagtttt 41780509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 44337775 - 44337709
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | |||||||||| |||||  ||||||||||||||||||||||||||||||||    
T  44337775 ttatgaattttagagtctatgtataatgtgcacatcaagtgtttgatgaaatgtttgaatgagtttt 44337709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 49427138 - 49427204
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | |||||||||| |||||  ||||||||||||||||||||||||||||||||    
T  49427138 ttatgaattttagagtctatgtataatgtgcacatcaagtgtttgatgaaatgtttgaatgagtttt 49427204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 102
Target Start/End: Original strand, 6435541 - 6435588
Alignment:
Q  55 tgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||||||||||  |||||| |||||||||||||||||||||||||    
T  6435541 tgtataatttgcacatcaagtgcttgatgaaatgtttgaatgagtttt 6435588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 17372484 - 17372543
Alignment:
Q  43 ttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||| |||||||| ||||| |||| ||| ||||||||||||||||||||||| ||||    
T  17372484 ttttagggtttatgtaaaatttccactacaaatgtttgatgaaatgtttgaatgaatttt 17372543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 19160067 - 19160133
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | |||||||||| |||||  |||||||| |||||||||||||||||||||||    
T  19160067 ttatgaattttagagtctatgtataatgtgcacatcaagtgttcgatgaaatgtttgaatgagtttt 19160133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 29762676 - 29762610
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | ||| |||||| |||||  ||||||||||||||||||||||||||||||||    
T  29762676 ttatgaattttagagtctatatataatgtgcacatcaagtgtttgatgaaatgtttgaatgagtttt 29762610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 45688869 - 45688925
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgt 57  Q
    |||||| ||||||||||| |||||| ||||||||||||| | ||||||| |||||||    
T  45688869 ttaattatttagatgtttgcatgtttatgttgtagttatcatttttagggtttatgt 45688925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 3658238 - 3658285
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttag 48  Q
    |||| ||||||||||||| |||||| ||||||||||| ||||||||||    
T  3658238 ttaaatgtttagatgtttgcatgtttatgttgtagttttgagttttag 3658285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 54 - 101
Target Start/End: Complemental strand, 14174196 - 14174149
Alignment:
Q  54 atgtataatttgcactccaagtgtttgatgaaatgtttgaatgagttt 101  Q
    ||||||||| |||||   ||||||||||||||||||||||||||||||    
T  14174196 atgtataatgtgcacataaagtgtttgatgaaatgtttgaatgagttt 14174149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 14772982 - 14772932
Alignment:
Q  51 tttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||||||||||||||||| ||||| ||||||| |||||||||||| ||||    
T  14772982 tttatgtataatttgcactcaaagtg-ttgatgagatgtttgaatgattttt 14772932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 39224839 - 39224792
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttag 48  Q
    |||| ||||||||||||| |||||| ||||||||||| ||||||||||    
T  39224839 ttaaatgtttagatgtttgcatgtttatgttgtagttttgagttttag 39224792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 46182179 - 46182132
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttag 48  Q
    |||| ||||||||||||| |||||| ||||||||||| ||||||||||    
T  46182179 ttaaatgtttagatgtttgcatgtttatgttgtagttttgagttttag 46182132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 49599493 - 49599446
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttag 48  Q
    |||| ||||||||||||| |||||| ||||||||||| ||||||||||    
T  49599493 ttaaatgtttagatgtttgcatgtttatgttgtagttttgagttttag 49599446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 42572232 - 42572166
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | ||||||||||||||||    |||| |||||||||||||||||||||||||    
T  42572232 ttatgatttttagagtctatgtataatttgcacatttagtgcttgatgaaatgtttgaatgagtttt 42572166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 49926823 - 49926757
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | |||||||||| |||||  ||||| |||||| |||||||||||||||||||    
T  49926823 ttatgatttttagagtctatgtataatctgcacatcaagtatttgatcaaatgtttgaatgagtttt 49926757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 48569033 - 48568993
Alignment:
Q  8 tttagatgtttacatgttaatgttgtagttatgagttttag 48  Q
    ||||||||||| |||||| ||||||||||| ||||||||||    
T  48569033 tttagatgtttgcatgtttatgttgtagttttgagttttag 48568993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 1e-38; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 14265137 - 14265238
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||| ||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  14265137 ttaaatgtttagatgttttcatgtttatgttgtagttatgagttttagggtttatgtataatttgcactccaagtatttgatgaaatgtttgaatgagtt 14265236  T
Q  101 tt 102  Q
    ||    
T  14265237 tt 14265238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 37281186 - 37281282
Alignment:
Q  6 tgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  37281186 tgtttggatgtttgcatgttaatgttgtagttatgagttttagggtttatgtataatttgcactccaagtgtttgatgaattgtttgaatgagtttt 37281282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 1639095 - 1638994
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||| | |||||||| |||||||||||||||||||||    
T  1639095 ttaattgtttagatgtttgcatgtttatgttgtagttatgagttttagggtttatgtataatttgcattgcaagtgttcgatgaaatgtttgaatgagtt 1638996  T
Q  101 tt 102  Q
    ||    
T  1638995 tt 1638994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 33449632 - 33449531
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||||||  ||||||| |||||| ||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33449632 ttaattgttatgatgtttgcatgtttatgttgtagttatcatttttagggtttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 33449533  T
Q  101 tt 102  Q
    ||    
T  33449532 tt 33449531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 6 - 102
Target Start/End: Complemental strand, 6464830 - 6464734
Alignment:
Q  6 tgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||   ||||||||||||||||||||||||||||||||||    
T  6464830 tgtttagatgtttccatgttaattttgtagttatgagttttagggtttatgtataatttgttgtccaagtgtttgatgaaatgtttgaatgagtttt 6464734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 19237016 - 19237114
Alignment:
Q  4 attgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||| ||||| |||| |||||||||||| | ||||||||||||||||||||||||||    
T  19237016 attgtttagatgtttgcatgtttatgttgtagttatgagttttagggtttatatatattttgcactccaaatttttgatgaaatgtttgaatgagtttt 19237114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 25577080 - 25576979
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||| ||||||||||| |||||| ||||||||||||| | ||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  25577080 ttaattatttagatgtttgcatgtttatgttgtagttatcatttttagggtttatgtataatttgcactccaagtgtttgataaaatgttggaatgagtt 25576981  T
Q  101 tt 102  Q
    ||    
T  25576980 tt 25576979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 36721842 - 36721757
Alignment:
Q  12 gatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatga 97  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||    
T  36721842 gatgtttgcatgttaatgttgtagttatgagttttagggtttatgtataatttgcactccaagtgtttgatggattgtttgaatga 36721757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 48088047 - 48087946
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||| ||||||||||| |||||| ||||||||||||| | ||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  48088047 ttaattatttagatgtttgcatgtttatgttgtagttatcatttttagggtttatgtataatttgcactccaagtgtttgataaaatgttggaatgagtt 48087948  T
Q  101 tt 102  Q
    ||    
T  48087947 tt 48087946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 6753938 - 6754034
Alignment:
Q  6 tgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||   ||||||||||||||||| ||||||||||||||||    
T  6753938 tgtttagatgtttccatgttaattttgtagttatgagttttagggtttatgtataatttgttgtccaagtgtttgatgaattgtttgaatgagtttt 6754034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 17370535 - 17370631
Alignment:
Q  6 tgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||||||||| |||||| ||||||||||| ||||||||||| |||||||||||||| |||| || |||||||||||||||||||||||||||||    
T  17370535 tgtttagatgtttgcatgtttatgttgtagttttgagttttagggtttatgtataatttacacttcaggtgtttgatgaaatgtttgaatgagtttt 17370631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 15636753 - 15636854
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    ||||||||| |||||||  |||||| |||||||||||||||||| |||| ||||||||||||||||||| ||| | ||||||||||||||||||||||||    
T  15636753 ttaattgttaagatgttcgcatgtttatgttgtagttatgagttatagggtttatgtataatttgcacttcaactatttgatgaaatgtttgaatgagtt 15636852  T
Q  101 tt 102  Q
    ||    
T  15636853 tt 15636854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 42382000 - 42382101
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||| ||||||||||| |||||| ||||||||||||| | ||||||| |||||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  42382000 ttaattatttagatgtttgcatgtttatgttgtagttatcatttttagggtttatgtataatttgcactctaagtgtttgataaaatgttggaatgagtt 42382099  T
Q  101 tt 102  Q
    ||    
T  42382100 tt 42382101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 42382780 - 42382881
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||| ||||||||||| |||||| ||||||||||||| | ||||||| |||||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  42382780 ttaattatttagatgtttgcatgtttatgttgtagttatcatttttagggtttatgtataatttgcactctaagtgtttgataaaatgttggaatgagtt 42382879  T
Q  101 tt 102  Q
    ||    
T  42382880 tt 42382881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 7953937 - 7954033
Alignment:
Q  6 tgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||| ||||||| |||||||||||||| ||||||| ||||||| |||||||||||| |  ||||||||||||||||||||||||||||||||||||    
T  7953937 tgtttggatgtttgcatgttaatgttgttgttatgacttttagggtttatgtataatgtttactccaagtgtttgatgaaatgtttgaatgagtttt 7954033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 102
Target Start/End: Complemental strand, 8633838 - 8633748
Alignment:
Q  12 gatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||| ||||||||||||||| ||||||| |||||| | |||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  8633838 gatgtttgcatgttaatgttgtaattatgagctttagggtatatgtataatttgcactccaagtgttcgatgaaatgtctgaatgagtttt 8633748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 17267782 - 17267688
Alignment:
Q  8 tttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||||||| |||||| |||||||||||  |||||||||| | ||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  17267782 tttagatgtttgcatgtttatgttgtagtttcgagttttagggtatatgtataatttgcattccaagtgtttgatgaaatatttgaatgagtttt 17267688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 774827 - 774727
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||||||||||||| | |||||| ||||||||||||| | ||||| | |||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  774827 ttaattgtttagatgtgtgcatgtttatgttgtagttataatttttaaggtttatgtaaaatttgcactcc-agtgtttgatgaaatgtttgaatgagtt 774729  T
Q  101 tt 102  Q
    ||    
T  774728 tt 774727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 42950510 - 42950409
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||| ||||||||||| |||||| ||||||||||||| | ||||||| ||||||||||||||| |||||||||||||||| |||||||  ||||||||    
T  42950510 ttaattatttagatgtttgcatgtttatgttgtagttatcatttttagggtttatgtataatttgtactccaagtgtttgataaaatgttgaaatgagtt 42950411  T
Q  101 tt 102  Q
    ||    
T  42950410 tt 42950409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 44835977 - 44835876
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||| ||||||||||| |||||| || |||||||||| | ||||||| ||||||||||||| ||||||||||||||||||||||| || |||||||||    
T  44835977 ttaattatttagatgtttgcatgtttatattgtagttatcatttttagggtttatgtataattggcactccaagtgtttgatgaaatattggaatgagtt 44835878  T
Q  101 tt 102  Q
    ||    
T  44835877 tt 44835876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 53827186 - 53827085
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||| ||||||||||| || ||| ||||||||||||| | ||||||| |||||||||||||||||||||||||||||||| ||||||| |||| ||||    
T  53827186 ttaattatttagatgtttgcacgttcatgttgtagttatcatttttagggtttatgtataatttgcactccaagtgtttgataaaatgttggaataagtt 53827087  T
Q  101 tt 102  Q
    ||    
T  53827086 tt 53827085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 20 - 102
Target Start/End: Complemental strand, 50343086 - 50343004
Alignment:
Q  20 catgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||| ||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  50343086 catgtttatgttatagttatgatttttagggtttatgtataatttgcactccaagtgtctgatgaaatgtttgaatgaatttt 50343004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 55391264 - 55391160
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagt---tatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatga 97  Q
    |||| ||||||||||||| |||||| ||||||||||   | | ||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  55391264 ttaaatgtttagatgtttgcatgtttatgttgtagtagtttttagttttatgatttatgtataatttgcactccaaatgtttgatgaaatatttgaatga 55391165  T
Q  98 gtttt 102  Q
    |||||    
T  55391164 gtttt 55391160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 29635412 - 29635311
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||| ||||||||||||| ||||||  |||| ||||| | ||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||| ||    
T  29635412 ttaaatgtttagatgtttgcatgtttgtgttttagtttttagttttagggtgtatgtataatttgcacttcaagtgtttgatgaaatgtttgaatgactt 29635313  T
Q  101 tt 102  Q
    ||    
T  29635312 tt 29635311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 39417443 - 39417342
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||| ||| |||||||  ||||| ||||||||||||| | ||||||| ||||||||||||||| |||||||||||||||| ||||||| |||||||||    
T  39417443 ttaattattttgatgtttgtatgtttatgttgtagttatcatttttagggtttatgtataatttgaactccaagtgtttgataaaatgttggaatgagtt 39417344  T
Q  101 tt 102  Q
    ||    
T  39417343 tt 39417342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 41 - 102
Target Start/End: Original strand, 4095551 - 4095612
Alignment:
Q  41 agttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4095551 agttttagggtttatgtataatttgcactcaaagtgtttgatgaaatgtttgaatgagtttt 4095612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 47065416 - 47065517
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||| ||||||||||| |||| | ||||||||||||| | ||||||| |||||||||||||| ||||| ||||||||| | ||||||| |||||||||    
T  47065416 ttaattatttagatgtttgcatggttatgttgtagttatcatttttagggtttatgtataattttcactctaagtgtttggtaaaatgttggaatgagtt 47065515  T
Q  101 tt 102  Q
    ||    
T  47065516 tt 47065517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 43688122 - 43688209
Alignment:
Q  14 tgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||| |||||| |||| |||||||||||||||||   ||||||| ||||||||| |||||||||| ||||||||||||||||||||||    
T  43688122 tgtttgcatgtttatgtcgtagttatgagttttagaggttatgtagaatttgcac-ccaagtgtttaatgaaatgtttgaatgagtttt 43688209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 34647714 - 34647655
Alignment:
Q  43 ttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  34647714 ttttagggtttatgtataatttgcacatcaagtgtttgatgaaatgtttgaatgagtttt 34647655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 102
Target Start/End: Complemental strand, 25156307 - 25156247
Alignment:
Q  42 gttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||||  ||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  25156307 gttttagagtttatgtataatttgtactccaagtgtttgatgaaatgtttgaatgattttt 25156247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 3163103 - 3163021
Alignment:
Q  13 atgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaat 95  Q
    ||||||||||| | ||||| ||| | |  |||||||| |||||||||| |||||||| |||||||||||||||||||||||||    
T  3163103 atgtttacatgcttatgttttagatttttgttttagggtttatgtatattttgcacttcaagtgtttgatgaaatgtttgaat 3163021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 13896325 - 13896259
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | ||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  13896325 ttatgatttttagagtctatgtataatttgcacatcaagtgtttgatgaaatgtttgaatgagtttt 13896259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 41577692 - 41577758
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | ||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  41577692 ttatgatttttagagtctatgtataatttgcacatcaagtgtttgatgaaatgtttgaatgagtttt 41577758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 46347013 - 46346964
Alignment:
Q  53 tatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  46347013 tatgtataatttgcacatcaagtgtttgatgaaatgtttgaatgagtttt 46346964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 2268948 - 2268882
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  |||||||||||| |||||  ||| ||||||||||||||||||||||||||||    
T  2268948 ttatgaattttagagtttatgtataatgtgcacatcaattgtttgatgaaatgtttgaatgagtttt 2268882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 4004542 - 4004476
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | |||||||||| |||||  ||||||||||||||||||||||||||||||||    
T  4004542 ttatgaattttagagtctatgtataatgtgcacatcaagtgtttgatgaaatgtttgaatgagtttt 4004476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 7245858 - 7245924
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | ||||||||||||||||  ||||||||| ||||||||||||||||||||||    
T  7245858 ttatgatttttagagtgtatgtataatttgcacatcaagtgttttatgaaatgtttgaatgagtttt 7245924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 20378342 - 20378276
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||| ||||| |||||||| |||  |||||||||||| |||||||||||||||||||    
T  20378342 ttatgatttttagggtttatttataatttacacatcaagtgtttgattaaatgtttgaatgagtttt 20378276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 45100921 - 45100855
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | |||||||||| |||||  ||||||||||||||||||||||||||||||||    
T  45100921 ttatgatttttagagtctatgtataatgtgcacatcaagtgtttgatgaaatgtttgaatgagtttt 45100855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 49219191 - 49219125
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | |||||||||| |||||  ||||||||||||||||||||||||||||||||    
T  49219191 ttatgaattttagagtatatgtataatgtgcacatcaagtgtttgatgaaatgtttgaatgagtttt 49219125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 49610253 - 49610319
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | |||||||||| |||||  ||||||||||||||||||||||||||||||||    
T  49610253 ttatgaattttagagtctatgtataatgtgcacatcaagtgtttgatgaaatgtttgaatgagtttt 49610319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 95
Target Start/End: Original strand, 2428251 - 2428310
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaat 95  Q
    |||||| ||||||  | ||||||||||||||||  |||||||||||||||||||||||||    
T  2428251 ttatgatttttagagtctatgtataatttgcacatcaagtgtttgatgaaatgtttgaat 2428310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 103
Target Start/End: Complemental strand, 3495484 - 3495417
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttta 103  Q
    |||||| ||||||  | |||||||||| |||||  |||||||| ||||||||||||||||||||||||    
T  3495484 ttatgaattttagagtctatgtataatgtgcacatcaagtgttcgatgaaatgtttgaatgagtttta 3495417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 6753796 - 6753843
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttag 48  Q
    |||| ||||||||||||| |||||||||||||||||| ||||||||||    
T  6753796 ttaaatgtttagatgtttgcatgttaatgttgtagttttgagttttag 6753843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 2647331 - 2647265
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | |||||||||| |||||  |||||||| |||||||||||||||||||||||    
T  2647331 ttatgaattttagactctatgtataatgtgcacatcaagtgttcgatgaaatgtttgaatgagtttt 2647265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 24702726 - 24702660
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | |||||||||| | |||  ||||||||||||||||||||||||||||||||    
T  24702726 ttatgaattttagagtctatgtataatgtacacatcaagtgtttgatgaaatgtttgaatgagtttt 24702660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 43476808 - 43476874
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | |||||||||| |||||  |||||||||||||||||||||||||| |||||    
T  43476808 ttatgaattttagagtctatgtataatgtgcacatcaagtgtttgatgaaatgtttgaatgggtttt 43476874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 51696061 - 51695995
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | |||||||||| |||||  ||||||||||||||||| ||||||||||||||    
T  51696061 ttatgaattttagagtctatgtataatgtgcacatcaagtgtttgatgaaatatttgaatgagtttt 51695995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 52569863 - 52569797
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | |||||||||| | |||  ||||||||||||||||||||||||||||||||    
T  52569863 ttatgatttttagagtctatgtataatgtacacatcaagtgtttgatgaaatgtttgaatgagtttt 52569797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 6464973 - 6464926
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttag 48  Q
    |||| ||||||||||||| |||||| ||||||||||| ||||||||||    
T  6464973 ttaaatgtttagatgtttgcatgtttatgttgtagttttgagttttag 6464926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 19236881 - 19236928
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttag 48  Q
    |||| ||||||||||||| |||||| ||||||||||| ||||||||||    
T  19236881 ttaaatgtttagatgtttgcatgtttatgttgtagttttgagttttag 19236928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 25577216 - 25577169
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttag 48  Q
    |||| ||||||||||||| |||||| ||||||||||| ||||||||||    
T  25577216 ttaaatgtttagatgtttgcatgtttatgttgtagttttgagttttag 25577169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 27186727 - 27186778
Alignment:
Q  51 tttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||||| ||||| |||| |||||||||||| |||||||||||||| ||||    
T  27186727 tttatgtaaaatttccactacaagtgtttgataaaatgtttgaatgaatttt 27186778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 37281044 - 37281091
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttag 48  Q
    |||| ||||||||||||| |||||| ||||||||||| ||||||||||    
T  37281044 ttaaatgtttagatgtttgcatgtttatgttgtagttttgagttttag 37281091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 39417584 - 39417537
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttag 48  Q
    |||| ||||||||||||| |||||| ||||||||||| ||||||||||    
T  39417584 ttaaatgtttagatgtttgcatgtttatgttgtagttttgagttttag 39417537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 15636626 - 15636667
Alignment:
Q  7 gtttagatgtttacatgttaatgttgtagttatgagttttag 48  Q
    |||||||||||| |||||| ||||||||||| ||||||||||    
T  15636626 gtttagatgtttgcatgtttatgttgtagttttgagttttag 15636667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 36378 - 36470
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttga 93  Q
    |||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36378 ttaattgtttagatgtttgcatgtttatgttgtagttatgagatttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttga 36470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 39597 - 39693
Alignment:
Q  6 tgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||| ||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  39597 tgtttggatgtttgcatgttaatgttgtagttatgagttttagggtttacgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 39693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 2e-36; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 3097996 - 3097895
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    ||||||| |||||||||| |||||| | ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3097996 ttaattgcttagatgtttgcatgtttacgttatagttatgagttttagggtttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 3097897  T
Q  101 tt 102  Q
    ||    
T  3097896 tt 3097895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 18744452 - 18744351
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||| | ||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  18744452 ttaattgtttagatgtttgcatgtttatgttgtagttatgagttttatggtttttgtataattttcactccaagtgtttgatgaaatgtttgaatgagtt 18744353  T
Q  101 tt 102  Q
    ||    
T  18744352 tt 18744351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 28051120 - 28051221
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||||| ||||||||| |||||| |||||||| |||| ||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  28051120 ttaattgtgtagatgtttgcatgtttatgttgtaattatcagttttagggtttatgtataatttgcactccaattatttgatgaaatgtttgaatgagtt 28051219  T
Q  101 tt 102  Q
    ||    
T  28051220 tt 28051221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 800885 - 800986
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||| ||||||||||| |||||| ||||||||||||| | ||||||| |||||||||||| ||||||||||||||||||| ||||||| |||||||||    
T  800885 ttaattatttagatgtttgcatgtttatgttgtagttatcatttttagggtttatgtataatgtgcactccaagtgtttgataaaatgttggaatgagtt 800984  T
Q  101 tt 102  Q
    ||    
T  800985 tt 800986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 20243891 - 20243992
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||||||||||||||| || ||  ||||||||||| ||||||||||  |||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  20243891 ttaattgtttagatgtttgcaagtgtatgttgtagttttgagttttagagtttatgtataattttcactccaagtgtttgatgaaatgtttgaatgaatt 20243990  T
Q  101 tt 102  Q
    ||    
T  20243991 tt 20243992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 22137875 - 22137976
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||||||||||||||| || ||  ||||||||||| ||||||||||  |||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  22137875 ttaattgtttagatgtttgcaagtgtatgttgtagttttgagttttagagtttatgtataattttcactccaagtgtttgatgaaatgtttgaatgaatt 22137974  T
Q  101 tt 102  Q
    ||    
T  22137975 tt 22137976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 35060458 - 35060357
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||| ||||||||||| |||||| ||||||||||||| | ||||||| ||||||||||| |||||||||||||||||||| ||||||| |||||||||    
T  35060458 ttaattatttagatgtttgcatgtttatgttgtagttatcatttttagggtttatgtataagttgcactccaagtgtttgataaaatgttggaatgagtt 35060359  T
Q  101 tt 102  Q
    ||    
T  35060358 tt 35060357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 14483303 - 14483203
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||||||||| ||||| |||||| ||||||||||||| |||||| || |||||||| ||||||||||||||||| ||||| |||||||||||||||||    
T  14483303 ttaattgtttagttgtttgcatgtttatgttgtagttatcagttttcgggtttatgtacaatttgcactccaagtgattgataaaatgtttgaatgagtt 14483204  T
Q  101 t 101  Q
    |    
T  14483203 t 14483203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 17465740 - 17465665
Alignment:
Q  27 atgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  17465740 atgttatagttatgagttttaggatttatgtatagtttgaactccaagtgtttgatgaaatgtttgaatgagtttt 17465665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 5570855 - 5570954
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    ||||||||||||||||||  ||||| || |||||||||||||||||||| |||||||||||||||||||  ||||||||| |||||| ||||||||||||    
T  5570855 ttaattgtttagatgtttgaatgtttatcttgtagttatgagttttagggtttatgtataatttgcact--aagtgtttgttgaaatatttgaatgagtt 5570952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 24559590 - 24559691
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||||| |||||||||   |||||| |||| |||||| ||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  24559590 ttaattatttagatgtaagcatgtttatgtcgtagttttgagttttagggtttatgtataattttcactccaattgtttgatgaaatgtttgaatgagtt 24559689  T
Q  101 tt 102  Q
    ||    
T  24559690 tt 24559691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 26856440 - 26856506
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26856440 ttatgatttttagggtttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 26856506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 5973501 - 5973412
Alignment:
Q  13 atgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| |||||| ||||||||||| | ||||||||| ||| ||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  5973501 atgtttgcatgtttatgttgtagttttaagttttagggtttgtgtataatttgtacttcaagtgtttgatgaaatgtttgaatgagtttt 5973412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 14095364 - 14095466
Alignment:
Q  1 ttaattgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtt 100  Q
    |||| ||||||||| |||  ||||| ||||||| ||| ||||||| ||  |||||||||||||||||||| || ||||||||||||||||||||||||||    
T  14095364 ttaagtgtttagatatttgtatgtttatgttgttgttgtgagtttaagcgtttatgtataatttgcactcaaattgtttgatgaaatgtttgaatgagtt 14095463  T
Q  101 tta 103  Q
    |||    
T  14095464 tta 14095466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 33 - 102
Target Start/End: Complemental strand, 20242593 - 20242524
Alignment:
Q  33 tagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||||| ||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  20242593 tagttatgatttttagggtttatgtataatttgcattacaagtgtttgatgaaatgtttgaatgagtttt 20242524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 33 - 102
Target Start/End: Complemental strand, 22136577 - 22136508
Alignment:
Q  33 tagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||||| ||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  22136577 tagttatgatttttagggtttatgtataatttgcattacaagtgtttgatgaaatgtttgaatgagtttt 22136508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 34132343 - 34132402
Alignment:
Q  43 ttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  34132343 ttttagggtttatgtataatttgcacttcaagtgtttgatgaaatgtttgaatgagtttt 34132402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 21865368 - 21865279
Alignment:
Q  13 atgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| |||||| ||||| || |||||||||||| | ||||| |||||||| || |||||||||| |||||||||||||||||||||||    
T  21865368 atgtttgcatgtttatgttataattatgagttttaaggtttatatataatttacagtccaagtgttcgatgaaatgtttgaatgagtttt 21865279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 13402287 - 13402353
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||| || || ||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  13402287 ttatgattttaagaatctatgtataatttgcacatcaagtgtttgatgaaatgtttgaatgagtttt 13402353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 53 - 101
Target Start/End: Complemental strand, 32028066 - 32028018
Alignment:
Q  53 tatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagttt 101  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||    
T  32028066 tatgtataatttgcacatcaagtgtttgatgaaatgtttgaatgagttt 32028018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 53 - 101
Target Start/End: Complemental strand, 32038125 - 32038077
Alignment:
Q  53 tatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagttt 101  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||    
T  32038125 tatgtataatttgcacatcaagtgtttgatgaaatgtttgaatgagttt 32038077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 12062232 - 12062283
Alignment:
Q  51 tttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||||||| |||||||||||| ||||||||||||||||| ||||||||||    
T  12062232 tttatgtatattttgcactccaattgtttgatgaaatgtttaaatgagtttt 12062283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 30257839 - 30257780
Alignment:
Q  43 ttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||| ||||||||||||||||||  ||| |||||||| |||||||||||||||||||    
T  30257839 ttttagggtttatgtataatttgcacatcaattgtttgattaaatgtttgaatgagtttt 30257780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 3766176 - 3766110
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | |||||||||| |||||  ||||||||||||||||||||||||||||||||    
T  3766176 ttatgaattttagagtctatgtataatgtgcacatcaagtgtttgatgaaatgtttgaatgagtttt 3766110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 94
Target Start/End: Original strand, 14114789 - 14114847
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaa 94  Q
    |||||| ||||||| |||||||| ||||| |||| ||||||||||||||||||||||||    
T  14114789 ttatgatttttagggtttatgtaaaatttacacttcaagtgtttgatgaaatgtttgaa 14114847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 29066312 - 29066378
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | |||||||||| |||||  ||||||||||||||||||||||||||||||||    
T  29066312 ttatgaattttagagtctatgtataatgtgcacatcaagtgtttgatgaaatgtttgaatgagtttt 29066378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 29075325 - 29075391
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | |||||||||| |||||  ||||||||||||||||||||||||||||||||    
T  29075325 ttatgaattttagagtctatgtataatgtgcacatcaagtgtttgatgaaatgtttgaatgagtttt 29075391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 29080089 - 29080155
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | |||||||||| |||||  ||||||||||||||||||||||||||||||||    
T  29080089 ttatgaattttagagtctatgtataatgtgcacatcaagtgtttgatgaaatgtttgaatgagtttt 29080155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 29107931 - 29107997
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | |||||||||| |||||  ||||||||||||||||||||||||||||||||    
T  29107931 ttatgaattttagagtctatgtataatgtgcacatcaagtgtttgatgaaatgtttgaatgagtttt 29107997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 29110294 - 29110360
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | |||||||||| |||||  ||||||||||||||||||||||||||||||||    
T  29110294 ttatgaattttagagtctatgtataatgtgcacatcaagtgtttgatgaaatgtttgaatgagtttt 29110360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 102
Target Start/End: Original strand, 33718820 - 33718878
Alignment:
Q  44 tttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||| | || |||||||| ||||||||||||||||||||||||||||||||    
T  33718820 tttagggtttatatttattttgcacttcaagtgtttgatgaaatgtttgaatgagtttt 33718878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 34803334 - 34803285
Alignment:
Q  53 tatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||||||| |||||  ||||||||||||||||||||||||||||||||    
T  34803334 tatgtataatgtgcacatcaagtgtttgatgaaatgtttgaatgagtttt 34803285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 17523731 - 17523637
Alignment:
Q  8 tttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||||||||| ||||| ||| |||||||   ||||||||| ||||| ||||||||| | ||| |||||| |||||| ||||| || |||||||    
T  17523731 tttagatgtttatatgtttatgatgtagtttctagttttagggtttatttataatttgtattccgagtgttcgatgaagtgttttaacgagtttt 17523637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 30765452 - 30765398
Alignment:
Q  27 atgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttga 81  Q
    ||||| ||||||||| ||||||| |||| |||||||||||||| ||| |||||||    
T  30765452 atgttatagttatgatttttagggtttaggtataatttgcacttcaaatgtttga 30765398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 749 - 824
Alignment:
Q  27 atgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||||||| | |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  749 atgttgtagttttaagttttaggatttatgtatattttgcactccaagtgtttgattaaatgtttgaatgagtttt 824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 5063 - 5160
Alignment:
Q  5 ttgtttagatgtttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||||||||||  ||||| |||||| ||| |||||||||||| |||||||||||||  |||||||||||||  ||||||||||||||||||||||    
T  5063 ttgtttagatgtttgtatgtttatgttgcagtaatgagttttagggtttatgtataattaacactccaagtgttcaatgaaatgtttgaatgagtttt 5160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0591 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0591
Description:

Target: scaffold0591; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 2412 - 2498
Alignment:
Q  16 tttacatgttaatgttgtagttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    ||||||| || ||||| ||||| | |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||    
T  2412 tttacatttttatgttttagtttttagttttaggatttatgtatattttgcactccaagtgtttgataaaatgtttgaatgaatttt 2498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 24657 - 24723
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  24657 ttatgatttttagggtttatgtataatttgcacttcaagtgtttgatgaaatgtttgaatgagtttt 24723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 1542 - 1608
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | |||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  1542 ttatgaattttagagtctatgtataatgtgcacaccaagtgtttgatgaaatgtttgaatgagtttt 1608  T

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Target: scaffold0192 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 102
Target Start/End: Complemental strand, 18330 - 18283
Alignment:
Q  55 tgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||||||||||   ||||||||||||||||||||||||||||||||    
T  18330 tgtataatttgcagatcaagtgtttgatgaaatgtttgaatgagtttt 18283  T

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Target: scaffold0101 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 36159 - 36093
Alignment:
Q  36 ttatgagttttaggatttatgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttt 102  Q
    |||||| ||||||  | |||||||||| |||||  |||||||| |||||||||||||||||||||||    
T  36159 ttatgaattttagagtctatgtataatgtgcacatcaagtgttcgatgaaatgtttgaatgagtttt 36093  T

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