View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1137_high_119 (Length: 276)

Name: NF1137_high_119
Description: NF1137
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1137_high_119
NF1137_high_119
[»] scaffold0329 (1 HSPs)
scaffold0329 (53-228)||(11975-12150)
[»] chr1 (2 HSPs)
chr1 (53-228)||(52778646-52778821)
chr1 (60-228)||(2360536-2360704)
[»] chr3 (4 HSPs)
chr3 (53-228)||(12286266-12286441)
chr3 (53-228)||(19585850-19586025)
chr3 (84-200)||(5666790-5666905)
chr3 (84-200)||(5676329-5676444)
[»] chr2 (3 HSPs)
chr2 (54-228)||(29500339-29500512)
chr2 (72-228)||(27035314-27035470)
chr2 (70-228)||(21808228-21808386)
[»] chr6 (2 HSPs)
chr6 (60-228)||(14815777-14815945)
chr6 (60-148)||(6568855-6568943)
[»] chr4 (7 HSPs)
chr4 (61-228)||(10653717-10653884)
chr4 (60-228)||(5240319-5240487)
chr4 (60-228)||(23166596-23166764)
chr4 (61-228)||(10867862-10868029)
chr4 (70-228)||(22644345-22644503)
chr4 (72-121)||(35088183-35088232)
chr4 (70-223)||(16987568-16987721)
[»] chr8 (5 HSPs)
chr8 (60-228)||(612970-613138)
chr8 (60-228)||(619364-619532)
chr8 (72-170)||(15886595-15886693)
chr8 (90-169)||(19992043-19992122)
chr8 (68-169)||(18551799-18551900)
[»] chr5 (3 HSPs)
chr5 (72-170)||(9846159-9846257)
chr5 (70-164)||(26465996-26466090)
chr5 (70-124)||(11925316-11925370)
[»] chr7 (2 HSPs)
chr7 (72-169)||(3819431-3819528)
chr7 (70-228)||(19665576-19665734)
[»] scaffold0257 (1 HSPs)
scaffold0257 (70-228)||(7640-7798)
[»] scaffold0669 (1 HSPs)
scaffold0669 (60-89)||(2832-2861)


Alignment Details
Target: scaffold0329 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: scaffold0329
Description:

Target: scaffold0329; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 53 - 228
Target Start/End: Original strand, 11975 - 12150
Alignment:
Q  53 caccacagagccaaaatcatatgctgaagcaagcaagcatgattgttggaaacaagccatgcaagttgaactgcaagctcttgagaaaactggtacctgg 152  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11975 caccactgagccaaaatcatatgctgaagcaagcaagcatgattgttggaaacaagccatgcaagttgaactgcaagctcttgagaaaactggtacctgg 12074  T
Q  153 caacttgttgatttaccatccaatatcaaacccattggatgtagatggatttataaagttaaatatcatgctgatg 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12075 caacttgttgatttaccatccaatatcaaacccattggatgtagatggatttataaagttaaatatcatgctgatg 12150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 172; Significance: 2e-92; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 53 - 228
Target Start/End: Original strand, 52778646 - 52778821
Alignment:
Q  53 caccacagagccaaaatcatatgctgaagcaagcaagcatgattgttggaaacaagccatgcaagttgaactgcaagctcttgagaaaactggtacctgg 152  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52778646 caccactgagccaaaatcatatgctgaagcaagcaagcatgattgttggaaacaagccatgcaagttgaactgcaagctcttgagaaaactggtacctgg 52778745  T
Q  153 caacttgttgatttaccatccaatatcaaacccattggatgtagatggatttataaagttaaatatcatgctgatg 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52778746 caacttgttgatttaccatccaatatcaaacccattggatgtagatggatttataaagttaaatatcatgctgatg 52778821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 60 - 228
Target Start/End: Original strand, 2360536 - 2360704
Alignment:
Q  60 gagccaaaatcatatgctgaagcaagcaagcatgattgttggaaacaagccatgcaagttgaactgcaagctcttgagaaaactggtacctggcaacttg 159  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| || || |||||||||||||| ||||||||||||||||||||||| ||| ||||||    
T  2360536 gagcctaaatcctatgctgaagcaagtaaacatgagtgttggaagcatgctatgcaagttgaacttcaagctcttgagaaaactggtacttggaaacttg 2360635  T
Q  160 ttgatttaccatccaatatcaaacccattggatgtagatggatttataaagttaaatatcatgctgatg 228  Q
    | ||||||||| | ||| | || || |||||||||||||||||||| ||||| ||||  ||||||||||    
T  2360636 tggatttaccaccaaatgttaagcctattggatgtagatggatttacaaagtcaaattccatgctgatg 2360704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 168; Significance: 4e-90; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 53 - 228
Target Start/End: Original strand, 12286266 - 12286441
Alignment:
Q  53 caccacagagccaaaatcatatgctgaagcaagcaagcatgattgttggaaacaagccatgcaagttgaactgcaagctcttgagaaaactggtacctgg 152  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12286266 caccactgagccaaaatcatatgctgaagcaagcaagcatgattgttggaaacaagccatgcaagttgaactgcaagctcttgagaaaactggtacctgg 12286365  T
Q  153 caacttgttgatttaccatccaatatcaaacccattggatgtagatggatttataaagttaaatatcatgctgatg 228  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  12286366 caacttgttgatttaccatccaatatcaaacccattggatgtagatggatttataaagttaaatatcatgttgatg 12286441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 53 - 228
Target Start/End: Complemental strand, 19586025 - 19585850
Alignment:
Q  53 caccacagagccaaaatcatatgctgaagcaagcaagcatgattgttggaaacaagccatgcaagttgaactgcaagctcttgagaaaactggtacctgg 152  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19586025 caccactgagccaaaatcatatgctgaagcaagcaagcatgatttttggaaacaagccatgcaagttgaactgcaagctcttgagaaaactggtacctgg 19585926  T
Q  153 caacttgttgatttaccatccaatatcaaacccattggatgtagatggatttataaagttaaatatcatgctgatg 228  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  19585925 aaacttgttgatttaccatccaatatcaaacccattggatgtagatggatttataaagttaaatatcatgttgatg 19585850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 84 - 200
Target Start/End: Complemental strand, 5666905 - 5666790
Alignment:
Q  84 agcaagcatgattgttggaaacaagccatgcaagttgaactgcaagctcttgagaaaactggtacctggcaacttgttgatttaccatccaatatcaaac 183  Q
    |||||||  |||| |||||| ||||| ||||||||||||||| | ||||||||||||||| | || | | ||||||| |||||||||||  || | ||||    
T  5666905 agcaagctagatttttggaagcaagcgatgcaagttgaactgta-gctcttgagaaaactaggacttcgaaacttgtagatttaccatcatatgtgaaac 5666807  T
Q  184 ccattggatgtagatgg 200  Q
    |||| ||||| ||||||    
T  5666806 ccataggatgcagatgg 5666790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 84 - 200
Target Start/End: Complemental strand, 5676444 - 5676329
Alignment:
Q  84 agcaagcatgattgttggaaacaagccatgcaagttgaactgcaagctcttgagaaaactggtacctggcaacttgttgatttaccatccaatatcaaac 183  Q
    |||||||  |||| |||||| ||||| ||||||||||||||| | ||||||||||| ||| | || ||| ||||||| |||||||||||  || | ||||    
T  5676444 agcaagctagatttttggaagcaagcgatgcaagttgaactgta-gctcttgagaagactaggacttggaaacttgtagatttaccatcatatgtgaaac 5676346  T
Q  184 ccattggatgtagatgg 200  Q
    |||| ||||| ||||||    
T  5676345 ccataggatgcagatgg 5676329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 4e-44; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 54 - 228
Target Start/End: Original strand, 29500339 - 29500512
Alignment:
Q  54 accacagagccaaaatcatatgctgaagcaagcaagcatgattgttggaaacaagccatgcaagttgaactgcaagctcttgagaaaactggtacctggc 153  Q
    ||||| || ||||||||||||| ||| |||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||      
T  29500339 accaccgaaccaaaatcatatgttgaggcaagcaagcatgactgttgaaaacaagccatgcaagttgaacttcaagctcttgagaaaactggtacctgag 29500438  T
Q  154 aacttgttgatttaccatccaatatcaaacccattggatgtagatggatttataaagttaaatatcatgctgatg 228  Q
    ||||||||||||||||| | ||| |||| |||| ||| ||||||||||| || ||||| ||| |||||| |||||    
T  29500439 aacttgttgatttaccaccaaatgtcaagccca-tggttgtagatggatgtacaaagtaaaacatcatgttgatg 29500512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 72 - 228
Target Start/End: Complemental strand, 27035470 - 27035314
Alignment:
Q  72 tatgctgaagcaagcaagcatgattgttggaaacaagccatgcaagttgaactgcaagctcttgagaaaactggtacctggcaacttgttgatttaccat 171  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||||||  |    ||||||||||| |||||||| ||| |  |||| ||||| |||     
T  27035470 tatgctgaggcaagcaagcatgaatgttggaaacaagcaatgcaagttgagttattggctcttgagaagactggtacatgggatattgtggattttccac 27035371  T
Q  172 ccaatatcaaacccattggatgtagatggatttataaagttaaatatcatgctgatg 228  Q
    |  || | ||||| ||||| || |||||||| | |||||| ||| |||||| |||||    
T  27035370 cacatgttaaacctattggttgcagatggatctttaaagtcaaacatcatgttgatg 27035314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 228
Target Start/End: Complemental strand, 21808386 - 21808228
Alignment:
Q  70 catatgctgaagcaagcaagcatgattgttggaaacaagccatgcaagttgaactgcaagctcttgagaaaactggtacctggcaacttgttgatttacc 169  Q
    |||||||||| ||||||||   |||||||||||| ||||| ||| |||||||| ||   ||||||||||| |||   || |||  ||| |||||| ||||    
T  21808386 catatgctgaggcaagcaaatttgattgttggaagcaagctatgaaagttgaattgtctgctcttgagaatactaaaacatggagactggttgatctacc 21808287  T
Q  170 atccaatatcaaacccattggatgtagatggatttataaagttaaatatcatgctgatg 228  Q
    | | ||| ||||||| || || || |||||||| |||||| | || |||||||| ||||    
T  21808286 acctaatgtcaaacctataggttgcagatggatatataaaatcaagtatcatgcagatg 21808228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 60 - 228
Target Start/End: Original strand, 14815777 - 14815945
Alignment:
Q  60 gagccaaaatcatatgctgaagcaagcaagcatgattgttggaaacaagccatgcaagttgaactgcaagctcttgagaaaactggtacctggcaacttg 159  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| || || |||||||||||||| ||||||||||||||||||||||| ||| ||||||    
T  14815777 gagcctaaatcctatgctgaagcaagtaaacatgagtgttggaagcatgctatgcaagttgaacttcaagctcttgagaaaactggtacttggaaacttg 14815876  T
Q  160 ttgatttaccatccaatatcaaacccattggatgtagatggatttataaagttaaatatcatgctgatg 228  Q
    | ||||||||| | ||| | || || |||||||||||||||||||| ||||| |||| |||||||||||    
T  14815877 tggatttaccaccaaatgttaagcctattggatgtagatggatttacaaagtcaaatttcatgctgatg 14815945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 6568943 - 6568855
Alignment:
Q  60 gagccaaaatcatatgctgaagcaagcaagcatgattgttggaaacaagccatgcaagttgaactgcaagctcttgagaaaactggtac 148  Q
    ||||| ||| ||||||||||||||||||| ||||| | ||||| ||| || ||||||| |||| |    || |||||||||||||||||    
T  6568943 gagcccaaaacatatgctgaagcaagcaaacatgaattttggagacaggctatgcaagatgaattatctgcacttgagaaaactggtac 6568855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 1e-37; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 61 - 228
Target Start/End: Original strand, 10653717 - 10653884
Alignment:
Q  61 agccaaaatcatatgctgaagcaagcaagcatgattgttggaaacaagccatgcaagttgaactgcaagctcttgagaaaactggtacctggcaacttgt 160  Q
    |||| ||||| |||||||||||||| || ||||| |||||||| || || |||||||||||||| ||||||||||||||||||||||| ||| |||||||    
T  10653717 agcctaaatcctatgctgaagcaagtaaacatgagtgttggaagcatgctatgcaagttgaacttcaagctcttgagaaaactggtacttggaaacttgt 10653816  T
Q  161 tgatttaccatccaatatcaaacccattggatgtagatggatttataaagttaaatatcatgctgatg 228  Q
     ||||||||| | ||| | || || |||||||||||||||||||| ||||| || | |||||||||||    
T  10653817 ggatttaccaccaaatgttaagcctattggatgtagatggatttacaaagtcaagtttcatgctgatg 10653884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 60 - 228
Target Start/End: Original strand, 5240319 - 5240487
Alignment:
Q  60 gagccaaaatcatatgctgaagcaagcaagcatgattgttggaaacaagccatgcaagttgaactgcaagctcttgagaaaactggtacctggcaacttg 159  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||  || || |||||||||||||| ||||||||||||||||||||||| ||| ||||||    
T  5240319 gagcctaaatcctatgctgaagcaagtaaacatgagtgttggatgcatgctatgcaagttgaacttcaagctcttgagaaaactggtacttggaaacttg 5240418  T
Q  160 ttgatttaccatccaatatcaaacccattggatgtagatggatttataaagttaaatatcatgctgatg 228  Q
    | ||||||||| | ||| | || || |||||||||||||||||||| ||||| |||| ||||| |||||    
T  5240419 tggatttaccaccaaatgttaagcctattggatgtagatggatttacaaagtcaaatttcatgttgatg 5240487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 60 - 228
Target Start/End: Complemental strand, 23166764 - 23166596
Alignment:
Q  60 gagccaaaatcatatgctgaagcaagcaagcatgattgttggaaacaagccatgcaagttgaactgcaagctcttgagaaaactggtacctggcaacttg 159  Q
    ||||||||||| |||||||| |||||||||| |||||| ||||| || || |||||||||||||| || |||||||||||||||||||| ||| ||||||    
T  23166764 gagccaaaatcttatgctgaggcaagcaagcttgattgctggaagcatgctatgcaagttgaacttcaggctcttgagaaaactggtacttggaaacttg 23166665  T
Q  160 ttgatttaccatccaatatcaaacccattggatgtagatggatttataaagttaaatatcatgctgatg 228  Q
    | ||||||||| | ||| | || || ||||| || |||||||||||||| || |||| |||||||||||    
T  23166664 tggatttaccaccaaatgtgaagcctattggttgcagatggatttataaggtcaaatttcatgctgatg 23166596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 61 - 228
Target Start/End: Original strand, 10867862 - 10868029
Alignment:
Q  61 agccaaaatcatatgctgaagcaagcaagcatgattgttggaaacaagccatgcaagttgaactgcaagctcttgagaaaactggtacctggcaacttgt 160  Q
    |||| ||||| |||||||||||||| || ||||| |||||||| || || |||||||||||||| ||||||||||||||||||||||| ||| |||||||    
T  10867862 agcctaaatcctatgctgaagcaagtaaacatgagtgttggaagcatgctatgcaagttgaacttcaagctcttgagaaaactggtacttggaaacttgt 10867961  T
Q  161 tgatttaccatccaatatcaaacccattggatgtagatggatttataaagttaaatatcatgctgatg 228  Q
     ||||||||  | ||| | || || |||||||||||||||||||| ||||| || | ||||| |||||    
T  10867962 ggatttacctccaaatgttaagcctattggatgtagatggatttacaaagtcaattttcatgttgatg 10868029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 70 - 228
Target Start/End: Original strand, 22644345 - 22644503
Alignment:
Q  70 catatgctgaagcaagcaagcatgattgttggaaacaagccatgcaagttgaactgcaagctcttgagaaaactggtacctggcaacttgttgatttacc 169  Q
    |||||| ||| |||||||| ||||||||||||||  |||| ||||||| |||  |    || ||||||||||||||||| ||| |  |||| ||||||||    
T  22644345 catatgttgaggcaagcaaacatgattgttggaataaagctatgcaagctgagttattggcacttgagaaaactggtacttgggatattgtagatttacc 22644444  T
Q  170 atccaatatcaaacccattggatgtagatggatttataaagttaaatatcatgctgatg 228  Q
    | |  || | ||||||||||| ||||||||||| || ||||| ||| || |||||||||    
T  22644445 agcatatgttaaacccattggttgtagatggatctacaaagtcaaacataatgctgatg 22644503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 121
Target Start/End: Original strand, 35088183 - 35088232
Alignment:
Q  72 tatgctgaagcaagcaagcatgattgttggaaacaagccatgcaagttga 121  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||||||    
T  35088183 tatgctgaggcaagcaagcatgaatgttggaaacaagcaatgcaagttga 35088232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 223
Target Start/End: Original strand, 16987568 - 16987721
Alignment:
Q  70 catatgctgaagcaagcaagcatgattgttggaaacaagccatgcaagttgaactgcaagctcttgagaaaactggtacctggcaacttgttgatttacc 169  Q
    |||||||||| ||||||||   |||||||||||| ||||| ||| |||||||| ||   ||||||||||| ||||| || |||  ||| |||||| | ||    
T  16987568 catatgctgaggcaagcaaatttgattgttggaaccaagctatgaaagttgaattgtctgctcttgagaatactggaacatggagactggttgatctgcc 16987667  T
Q  170 atccaatatcaaacccattggatgtagatggatttataaagttaaatatcatgc 223  Q
    | | ||| ||||||| || || || |||||||| |||||| | || ||||||||    
T  16987668 acctaatgtcaaacctataggttgcagatggatatataaaatcaagtatcatgc 16987721  T

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Target: chr8 (Bit Score: 65; Significance: 1e-28; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 60 - 228
Target Start/End: Original strand, 612970 - 613138
Alignment:
Q  60 gagccaaaatcatatgctgaagcaagcaagcatgattgttggaaacaagccatgcaagttgaactgcaagctcttgagaaaactggtacctggcaacttg 159  Q
    ||||| ||||| |||||||||||||| ||  |||||| || ||| || || |||||||||||||| |||||||||||||||||||| || ||| | ||||    
T  612970 gagcctaaatcctatgctgaagcaagtaaatatgatttttagaagcatgcaatgcaagttgaacttcaagctcttgagaaaactggcacttggaagcttg 613069  T
Q  160 ttgatttaccatccaatatcaaacccattggatgtagatggatttataaagttaaatatcatgctgatg 228  Q
    | ||| ||||| | ||| | || ||||||||||||||||||||||| ||||| || | |||||||||||    
T  613070 tggatataccaccaaatgttaagcccattggatgtagatggatttacaaagtcaagtttcatgctgatg 613138  T

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Target: chr8; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 60 - 228
Target Start/End: Original strand, 619364 - 619532
Alignment:
Q  60 gagccaaaatcatatgctgaagcaagcaagcatgattgttggaaacaagccatgcaagttgaactgcaagctcttgagaaaactggtacctggcaacttg 159  Q
    ||||| ||||| |||||||||||||| ||  |||||| || ||| || || |||||||||||||| |||||||||||||||||||| || ||| | ||||    
T  619364 gagcctaaatcctatgctgaagcaagtaaatatgatttttagaagcatgcaatgcaagttgaacttcaagctcttgagaaaactggcacttggaagcttg 619463  T
Q  160 ttgatttaccatccaatatcaaacccattggatgtagatggatttataaagttaaatatcatgctgatg 228  Q
    | ||| ||||| | ||| | || ||||||||||||||||||||||| ||||| || | |||||||||||    
T  619464 tggatataccaccaaatgttaagcccattggatgtagatggatttacaaagtcaagtttcatgctgatg 619532  T

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Target: chr8; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 72 - 170
Target Start/End: Complemental strand, 15886693 - 15886595
Alignment:
Q  72 tatgctgaagcaagcaagcatgattgttggaaacaagccatgcaagttgaactgcaagctcttgagaaaactggtacctggcaacttgttgatttacca 170  Q
    |||||||| ||||||||||||||||| ||||| ||||| ||||||||||||||   ||||||||||| ||||||||| ||| |  ||||||||||||||    
T  15886693 tatgctgaggcaagcaagcatgattgctggaatcaagctatgcaagttgaactatcagctcttgagacaactggtacttggaagattgttgatttacca 15886595  T

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Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 90 - 169
Target Start/End: Original strand, 19992043 - 19992122
Alignment:
Q  90 catgattgttggaaacaagccatgcaagttgaactgcaagctcttgagaaaactggtacctggcaacttgttgatttacc 169  Q
    |||||||||||||| ||||| ||||||| |||||||   |||||| |  |||||||||| |||||| | |||||||||||    
T  19992043 catgattgttggaagcaagctatgcaagatgaactgactgctcttcatcaaactggtacttggcaaatagttgatttacc 19992122  T

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Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 169
Target Start/End: Complemental strand, 18551900 - 18551799
Alignment:
Q  68 atcatatgctgaagcaagcaagcatgattgttggaaacaagccatgcaagttgaactgcaagctcttgagaaaactggtacctggcaacttgttgattta 167  Q
    |||||||| ||| || ||||||  ||||||||||||  |||||||| |   ||||||  ||||||||||  |||||||||| ||| ||||||||| ||||    
T  18551900 atcatatgttgaggctagcaagtttgattgttggaataaagccatggacactgaacttaaagctcttgaacaaactggtacttggaaacttgttggttta 18551801  T
Q  168 cc 169  Q
    ||    
T  18551800 cc 18551799  T

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Target: chr5 (Bit Score: 47; Significance: 7e-18; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 72 - 170
Target Start/End: Complemental strand, 9846257 - 9846159
Alignment:
Q  72 tatgctgaagcaagcaagcatgattgttggaaacaagccatgcaagttgaactgcaagctcttgagaaaactggtacctggcaacttgttgatttacca 170  Q
    |||||||||||||| ||  ||||||||||||  ||||||||||||| ||||||  | ||||||||||| |||||||| ||| || ||||||||||||||    
T  9846257 tatgctgaagcaagtaaatatgattgttggactcaagccatgcaagctgaactaaatgctcttgagaagactggtacatggaaagttgttgatttacca 9846159  T

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Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 164
Target Start/End: Complemental strand, 26466090 - 26465996
Alignment:
Q  70 catatgctgaagcaagcaagcatgattgttggaaacaagccatgcaagttgaactgcaagctcttgagaaaactggtacctggcaacttgttgat 164  Q
    |||||||||| ||||||||   |||||||||||| ||||| |||||||||||||||   ||||||||||| ||||| |||||| |||| ||||||    
T  26466090 catatgctgaggcaagcaaatttgattgttggaagcaagctatgcaagttgaactgtctgctcttgagaatactggaacctggaaactggttgat 26465996  T

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Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 124
Target Start/End: Original strand, 11925316 - 11925370
Alignment:
Q  70 catatgctgaagcaagcaagcatgattgttggaaacaagccatgcaagttgaact 124  Q
    |||||| ||| ||||| ||||||||||||||||||||||| ||||||||| ||||    
T  11925316 catatgttgaggcaagaaagcatgattgttggaaacaagcgatgcaagttaaact 11925370  T

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Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 169
Target Start/End: Complemental strand, 3819528 - 3819431
Alignment:
Q  72 tatgctgaagcaagcaagcatgattgttggaaacaagccatgcaagttgaactgcaagctcttgagaaaactggtacctggcaacttgttgatttacc 169  Q
    ||||||||||||| |||   |||||||||||| ||||| ||||| ||||||||   | |||||||||||||| | || ||| ||||||||||||||||    
T  3819528 tatgctgaagcaaacaaatttgattgttggaaccaagcaatgcaggttgaacttacaactcttgagaaaactcgcacttggaaacttgttgatttacc 3819431  T

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Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 228
Target Start/End: Original strand, 19665576 - 19665734
Alignment:
Q  70 catatgctgaagcaagcaagcatgattgttggaaacaagccatgcaagttgaactgcaagctcttgagaaaactggtacctggcaacttgttgatttacc 169  Q
    |||||| |||||||| ||| |||  ||||||| | || || ||||||  ||||||   ||||||||| || |||||||| ||| |||| || ||||||||    
T  19665576 catatgatgaagcaaacaaacatacttgttggcagcaggctatgcaaactgaacttacagctcttgaaaatactggtacttggaaactggtggatttacc 19665675  T
Q  170 atccaatatcaaacccattggatgtagatggatttataaagttaaatatcatgctgatg 228  Q
    | | || |||||||| || ||||| || ||||| |||||| | ||||||||||| ||||    
T  19665676 acctaacatcaaacctataggatgcaggtggatatataaaatcaaatatcatgcagatg 19665734  T

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Target: scaffold0257 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 228
Target Start/End: Original strand, 7640 - 7798
Alignment:
Q  70 catatgctgaagcaagcaagcatgattgttggaaacaagccatgcaagttgaactgcaagctcttgagaaaactggtacctggcaacttgttgatttacc 169  Q
    |||||| |||||||| ||| |||  ||||||| | || || ||||||  ||||||   ||||||||| || |||||||| ||| |||| || ||||||||    
T  7640 catatgatgaagcaaacaaacatacttgttggcagcaggctatgcaaactgaacttacagctcttgaaaatactggtacttggaaactggtggatttacc 7739  T
Q  170 atccaatatcaaacccattggatgtagatggatttataaagttaaatatcatgctgatg 228  Q
    | |  | |||||||| || ||||| || ||||| |||||| | ||||||||||| ||||    
T  7740 acctgacatcaaacctataggatgcaggtggatatataaaatcaaatatcatgcagatg 7798  T

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Target: scaffold0669 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0669
Description:

Target: scaffold0669; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 89
Target Start/End: Original strand, 2832 - 2861
Alignment:
Q  60 gagccaaaatcatatgctgaagcaagcaag 89  Q
    ||||||||||||||||||||||||||||||    
T  2832 gagccaaaatcatatgctgaagcaagcaag 2861  T

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