View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1137_high_137 (Length: 251)
Name: NF1137_high_137
Description: NF1137
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1137_high_137 |
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Alignment Details
Target: chr3 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 24262851 - 24262609
Alignment:
| Q |
1 |
tccaagttgtagcaaactacttctgctgaagacatgtatacataaccctctccaagactctttctgttaaaggtgaattgttcatcaacttgttttgttt |
100 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24262851 |
tccaagttgtagcaaactacttctgctgaaggcatgtatacataaccctctccaagactctttctgttaaaggtgaattgttcatcaacttgttttgttt |
24262752 |
T |
|
| Q |
101 |
tcatgcttcatgcttgttaattttggttttgatgctatcctttagttacatgttatgtgagcaaaactttgtggtccacgtttgaagttaccatgtttaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24262751 |
tcatgcttcatgcttgttaattttggttttgatgctatcctttagttacatgttatgtgagcaaaactttgtggtccacgtttgaagttaccatgtttaa |
24262652 |
T |
|
| Q |
201 |
ttatgtggtagacaatagaataatttttcttgcctttcatatca |
244 |
Q |
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|||||| |||||||||||||||||||||||||||||| |||||| |
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| T |
24262651 |
ttatgt-gtagacaatagaataatttttcttgcctttgatatca |
24262609 |
T |
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