View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1137_low_104 (Length: 349)

Name: NF1137_low_104
Description: NF1137
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1137_low_104
NF1137_low_104
[»] chr2 (41 HSPs)
chr2 (76-237)||(974534-974695)
chr2 (76-239)||(20033993-20034155)
chr2 (76-225)||(27523881-27524029)
chr2 (1-114)||(27523913-27524026)
chr2 (76-201)||(34578085-34578210)
chr2 (1-101)||(974537-974637)
chr2 (76-237)||(7301983-7302138)
chr2 (1-102)||(20034051-20034152)
chr2 (115-238)||(20063958-20064080)
chr2 (76-226)||(21869105-21869254)
chr2 (1-114)||(34578088-34578201)
chr2 (1-114)||(7301986-7302094)
chr2 (118-225)||(19262101-19262207)
chr2 (37-115)||(20063958-20064036)
chr2 (1-103)||(21869149-21869251)
chr2 (115-200)||(1405018-1405103)
chr2 (112-236)||(19245821-19245944)
chr2 (40-115)||(19262132-19262207)
chr2 (117-200)||(31237785-31237868)
chr2 (37-115)||(1405018-1405096)
chr2 (39-103)||(31237804-31237868)
chr2 (37-103)||(30433050-30433116)
chr2 (115-188)||(30433050-30433123)
chr2 (34-99)||(19245821-19245886)
chr2 (42-103)||(36430088-36430149)
chr2 (118-201)||(25538953-25539036)
chr2 (120-179)||(36430088-36430147)
chr2 (118-191)||(16767023-16767097)
chr2 (119-235)||(8428461-8428576)
chr2 (40-96)||(16767023-16767079)
chr2 (40-100)||(25538976-25539036)
chr2 (111-177)||(27749341-27749407)
chr2 (33-99)||(27749341-27749407)
chr2 (140-201)||(34167548-34167610)
chr2 (118-210)||(13502472-13502564)
chr2 (41-96)||(8428461-8428516)
chr2 (127-189)||(15627991-15628053)
chr2 (118-191)||(27407029-27407103)
chr2 (118-191)||(35565772-35565848)
chr2 (140-188)||(15588676-15588724)
chr2 (1-37)||(19262132-19262168)
[»] chr8 (52 HSPs)
chr8 (76-238)||(2040315-2040476)
chr8 (78-237)||(40541593-40541751)
chr8 (1-114)||(2040318-2040431)
chr8 (76-231)||(16752219-16752373)
chr8 (1-114)||(40541637-40541750)
chr8 (115-226)||(45403264-45403374)
chr8 (1-103)||(16752222-16752324)
chr8 (39-115)||(7489099-7489175)
chr8 (115-226)||(5922283-5922393)
chr8 (117-236)||(7489057-7489175)
chr8 (115-201)||(24414095-24414181)
chr8 (37-115)||(45403264-45403342)
chr8 (124-201)||(7262006-7262083)
chr8 (117-238)||(11879837-11879957)
chr8 (117-238)||(11897253-11897373)
chr8 (119-200)||(19704266-19704347)
chr8 (37-102)||(24414116-24414181)
chr8 (115-187)||(32424569-32424641)
chr8 (37-115)||(5922283-5922361)
chr8 (41-115)||(19704273-19704347)
chr8 (49-115)||(27836115-27836181)
chr8 (46-114)||(7262006-7262074)
chr8 (37-101)||(32424569-32424633)
chr8 (40-103)||(15294907-15294970)
chr8 (40-103)||(15475276-15475339)
chr8 (118-188)||(15294907-15294977)
chr8 (118-188)||(15475276-15475346)
chr8 (127-177)||(27836131-27836181)
chr8 (118-191)||(17647235-17647308)
chr8 (39-101)||(11879837-11879899)
chr8 (39-101)||(11897253-11897315)
chr8 (126-200)||(17566344-17566418)
chr8 (118-191)||(6811057-6811130)
chr8 (40-96)||(17647235-17647291)
chr8 (118-177)||(15761190-15761249)
chr8 (40-99)||(15761190-15761249)
chr8 (125-188)||(29384133-29384196)
chr8 (118-191)||(15231859-15231932)
chr8 (118-235)||(23142412-23142528)
chr8 (47-99)||(29384144-29384196)
chr8 (40-99)||(6811057-6811116)
chr8 (48-99)||(17566344-17566395)
chr8 (40-99)||(15231859-15231918)
chr8 (40-99)||(23142412-23142471)
chr8 (118-201)||(24056378-24056461)
chr8 (118-188)||(22910024-22910094)
chr8 (108-177)||(26574949-26575018)
chr8 (30-99)||(26574949-26575018)
chr8 (1-37)||(7489099-7489135)
chr8 (1-37)||(19704273-19704309)
chr8 (40-96)||(24056405-24056461)
chr8 (157-201)||(26879787-26879831)
[»] chr3 (65 HSPs)
chr3 (76-239)||(8560228-8560390)
chr3 (78-225)||(8592184-8592330)
chr3 (76-235)||(18014187-18014345)
chr3 (76-226)||(3041419-3041568)
chr3 (76-236)||(22971005-22971163)
chr3 (76-234)||(19348749-19348906)
chr3 (1-115)||(8592215-8592329)
chr3 (1-114)||(3041422-3041535)
chr3 (79-236)||(20766675-20766831)
chr3 (1-103)||(18014190-18014292)
chr3 (1-114)||(22971008-22971121)
chr3 (76-226)||(21553677-21553825)
chr3 (1-102)||(8560286-8560387)
chr3 (1-102)||(19348752-19348853)
chr3 (1-93)||(21553729-21553822)
chr3 (1-102)||(20766730-20766831)
chr3 (37-115)||(28746011-28746089)
chr3 (115-192)||(28746011-28746088)
chr3 (117-235)||(24619972-24620089)
chr3 (76-201)||(27090645-27090763)
chr3 (39-103)||(24620025-24620089)
chr3 (115-189)||(20756257-20756331)
chr3 (37-103)||(20756257-20756323)
chr3 (115-226)||(39428138-39428252)
chr3 (30-99)||(27090670-27090739)
chr3 (118-189)||(17064545-17064616)
chr3 (118-201)||(27676674-27676757)
chr3 (119-238)||(29067516-29067633)
chr3 (118-188)||(13286182-13286252)
chr3 (120-201)||(22355874-22355955)
chr3 (42-115)||(22355882-22355955)
chr3 (40-99)||(17064545-17064604)
chr3 (118-191)||(3449128-3449201)
chr3 (118-191)||(6136387-6136460)
chr3 (40-101)||(13286182-13286243)
chr3 (118-188)||(28136000-28136070)
chr3 (42-99)||(17796805-17796862)
chr3 (120-177)||(17796805-17796862)
chr3 (42-99)||(19105245-19105302)
chr3 (120-177)||(19105245-19105302)
chr3 (37-115)||(39428138-39428220)
chr3 (40-96)||(27676674-27676730)
chr3 (127-191)||(41671426-41671490)
chr3 (40-99)||(3449142-3449201)
chr3 (40-99)||(6136401-6136460)
chr3 (40-99)||(28136000-28136059)
chr3 (154-201)||(30727667-30727714)
chr3 (118-188)||(10872536-10872606)
chr3 (118-188)||(25870143-25870213)
chr3 (41-115)||(29067516-29067589)
chr3 (144-201)||(13006089-13006146)
chr3 (40-97)||(22137515-22137572)
chr3 (118-175)||(22137515-22137572)
chr3 (40-96)||(10872550-10872606)
chr3 (108-188)||(27055321-27055401)
chr3 (49-97)||(41671426-41671474)
chr3 (40-99)||(25870154-25870213)
chr3 (154-236)||(9169869-9169950)
chr3 (118-188)||(42697086-42697156)
chr3 (118-191)||(21963669-21963742)
chr3 (118-191)||(21986105-21986178)
chr3 (30-99)||(27055321-27055390)
chr3 (40-97)||(42697086-42697143)
chr3 (1-37)||(22355882-22355918)
chr3 (1-37)||(28746053-28746089)
[»] chr4 (57 HSPs)
chr4 (76-236)||(55476184-55476343)
chr4 (1-101)||(55476187-55476287)
chr4 (117-236)||(9770349-9770467)
chr4 (115-226)||(23064745-23064855)
chr4 (39-115)||(9770349-9770425)
chr4 (76-189)||(8367398-8367511)
chr4 (115-235)||(36121058-36121177)
chr4 (37-103)||(5375900-5375966)
chr4 (1-103)||(8367401-8367503)
chr4 (115-188)||(5375900-5375973)
chr4 (37-101)||(23064791-23064855)
chr4 (37-103)||(36121058-36121124)
chr4 (118-199)||(8010946-8011027)
chr4 (115-228)||(13023793-13023905)
chr4 (118-187)||(37240477-37240546)
chr4 (125-201)||(6346763-6346839)
chr4 (115-191)||(10394845-10394921)
chr4 (121-201)||(13551480-13551560)
chr4 (43-115)||(13551488-13551560)
chr4 (40-115)||(8010952-8011027)
chr4 (118-201)||(9911219-9911302)
chr4 (40-99)||(37240477-37240536)
chr4 (40-103)||(9911239-9911302)
chr4 (37-99)||(10394845-10394907)
chr4 (122-236)||(4157269-4157385)
chr4 (122-236)||(4157556-4157672)
chr4 (40-99)||(10143138-10143197)
chr4 (118-177)||(10143138-10143197)
chr4 (123-201)||(5943067-5943145)
chr4 (118-191)||(5361783-5361856)
chr4 (140-201)||(7045204-7045265)
chr4 (47-99)||(6346787-6346839)
chr4 (118-182)||(7452744-7452807)
chr4 (40-99)||(5361797-5361856)
chr4 (40-99)||(7452744-7452802)
chr4 (154-232)||(8409790-8409867)
chr4 (37-115)||(13023793-13023871)
chr4 (44-97)||(4157269-4157322)
chr4 (44-97)||(4157556-4157609)
chr4 (118-191)||(18459449-18459522)
chr4 (40-96)||(7045001-7045057)
chr4 (118-174)||(7045001-7045057)
chr4 (116-192)||(8743582-8743658)
chr4 (40-95)||(24719813-24719868)
chr4 (118-173)||(24719813-24719868)
chr4 (45-99)||(5943091-5943145)
chr4 (62-96)||(7045204-7045238)
chr4 (47-97)||(8889462-8889512)
chr4 (125-175)||(8889462-8889512)
chr4 (118-175)||(9149556-9149613)
chr4 (40-97)||(9149556-9149613)
chr4 (118-191)||(17466317-17466390)
chr4 (112-160)||(5884129-5884177)
chr4 (34-82)||(5884129-5884177)
chr4 (1-37)||(8010952-8010988)
chr4 (1-37)||(9770389-9770425)
chr4 (156-192)||(46664191-46664227)
[»] scaffold0079 (2 HSPs)
scaffold0079 (76-237)||(14699-14859)
scaffold0079 (1-114)||(14743-14856)
[»] chr7 (70 HSPs)
chr7 (76-238)||(25842503-25842664)
chr7 (76-235)||(23618204-23618362)
chr7 (76-237)||(1981098-1981256)
chr7 (76-226)||(8304282-8304431)
chr7 (1-114)||(23618246-23618359)
chr7 (1-114)||(25842548-25842661)
chr7 (1-101)||(1981155-1981253)
chr7 (1-102)||(8304285-8304386)
chr7 (115-235)||(24989549-24989667)
chr7 (117-235)||(17811585-17811702)
chr7 (115-235)||(5715520-5715635)
chr7 (37-103)||(5715520-5715586)
chr7 (76-201)||(4574926-4575051)
chr7 (39-115)||(17811585-17811661)
chr7 (74-189)||(7307204-7307321)
chr7 (80-232)||(8629506-8629657)
chr7 (118-226)||(20570669-20570776)
chr7 (115-174)||(24725307-24725366)
chr7 (37-96)||(24725307-24725366)
chr7 (115-226)||(27221649-27221760)
chr7 (37-103)||(24989602-24989667)
chr7 (118-235)||(5058767-5058882)
chr7 (118-235)||(44944620-44944736)
chr7 (121-201)||(9685102-9685182)
chr7 (43-115)||(9685110-9685182)
chr7 (40-103)||(44944673-44944736)
chr7 (1-99)||(4574929-4575027)
chr7 (1-97)||(7307209-7307307)
chr7 (115-201)||(11326518-11326604)
chr7 (37-103)||(11326518-11326584)
chr7 (40-102)||(20570714-20570776)
chr7 (37-115)||(27221649-27221727)
chr7 (118-188)||(39182394-39182464)
chr7 (2-103)||(8629556-8629657)
chr7 (118-226)||(4247594-4247701)
chr7 (40-99)||(4247594-4247653)
chr7 (154-201)||(8253992-8254039)
chr7 (118-189)||(26565368-26565439)
chr7 (40-99)||(39182394-39182453)
chr7 (118-191)||(14055495-14055568)
chr7 (118-191)||(14365523-14365596)
chr7 (118-191)||(22687085-22687158)
chr7 (118-177)||(8329876-8329935)
chr7 (40-99)||(8329876-8329935)
chr7 (118-177)||(8343634-8343693)
chr7 (40-99)||(8343634-8343693)
chr7 (40-99)||(26565380-26565439)
chr7 (118-188)||(1977787-1977856)
chr7 (122-192)||(17741886-17741956)
chr7 (40-97)||(14055495-14055552)
chr7 (40-97)||(14365523-14365580)
chr7 (118-191)||(21846265-21846338)
chr7 (76-201)||(26340181-26340305)
chr7 (40-99)||(1977787-1977845)
chr7 (40-99)||(5058767-5058825)
chr7 (118-177)||(8346363-8346422)
chr7 (40-99)||(8346363-8346422)
chr7 (114-177)||(21157525-21157588)
chr7 (36-99)||(21157525-21157588)
chr7 (40-99)||(22687099-22687158)
chr7 (35-92)||(26340212-26340268)
chr7 (152-192)||(7307204-7307244)
chr7 (118-174)||(8329814-8329870)
chr7 (40-96)||(8329814-8329870)
chr7 (157-201)||(17809000-17809044)
chr7 (40-96)||(21846282-21846338)
chr7 (39-94)||(8572374-8572429)
chr7 (117-172)||(8572374-8572429)
chr7 (120-191)||(30294486-30294556)
chr7 (42-94)||(30294486-30294538)
[»] chr1 (60 HSPs)
chr1 (76-233)||(17197306-17197461)
chr1 (78-226)||(12002645-12002790)
chr1 (118-236)||(13100428-13100545)
chr1 (1-114)||(17197346-17197458)
chr1 (117-238)||(25146540-25146660)
chr1 (115-235)||(14074258-14074377)
chr1 (118-201)||(21846082-21846165)
chr1 (1-95)||(12002695-12002789)
chr1 (37-103)||(23528891-23528957)
chr1 (115-179)||(23528891-23528955)
chr1 (118-233)||(16125232-16125346)
chr1 (40-115)||(21846090-21846165)
chr1 (115-201)||(19009756-19009842)
chr1 (76-179)||(8773464-8773567)
chr1 (40-103)||(16125283-16125346)
chr1 (37-115)||(19009764-19009842)
chr1 (1-102)||(8773467-8773568)
chr1 (127-200)||(42179880-42179953)
chr1 (37-101)||(14074313-14074377)
chr1 (108-200)||(16434737-16434829)
chr1 (115-226)||(9954817-9954927)
chr1 (115-201)||(9351871-9351957)
chr1 (37-115)||(9351879-9351957)
chr1 (115-177)||(18304643-18304705)
chr1 (37-99)||(18304643-18304705)
chr1 (40-101)||(13100428-13100489)
chr1 (42-103)||(17055747-17055808)
chr1 (120-188)||(17055740-17055808)
chr1 (39-99)||(25146600-25146660)
chr1 (117-200)||(9128647-9128730)
chr1 (37-115)||(9954849-9954927)
chr1 (82-200)||(22789385-22789503)
chr1 (76-201)||(39845063-39845188)
chr1 (39-115)||(9128654-9128730)
chr1 (124-200)||(17869559-17869635)
chr1 (46-113)||(17869568-17869635)
chr1 (118-191)||(47786096-47786169)
chr1 (136-192)||(9321552-9321608)
chr1 (49-101)||(42179901-42179953)
chr1 (4-99)||(22789385-22789480)
chr1 (30-99)||(16434737-16434806)
chr1 (118-191)||(32881558-32881631)
chr1 (118-191)||(41032591-41032664)
chr1 (119-191)||(30619181-30619252)
chr1 (40-99)||(41032605-41032664)
chr1 (40-99)||(47786096-47786155)
chr1 (134-192)||(27502172-27502230)
chr1 (58-115)||(9321551-9321608)
chr1 (41-94)||(30619181-30619234)
chr1 (1-97)||(39845089-39845185)
chr1 (40-99)||(32881558-32881617)
chr1 (56-102)||(27502184-27502230)
chr1 (78-115)||(13276072-13276109)
chr1 (108-177)||(21242859-21242928)
chr1 (30-99)||(21242859-21242928)
chr1 (1-37)||(9351879-9351915)
chr1 (1-37)||(9954849-9954885)
chr1 (127-191)||(12513518-12513582)
chr1 (5-37)||(13276072-13276104)
chr1 (1-37)||(19009764-19009800)
[»] chr6 (64 HSPs)
chr6 (76-236)||(27890582-27890741)
chr6 (1-101)||(27890585-27890685)
chr6 (115-238)||(11327334-11327456)
chr6 (115-236)||(7223750-7223870)
chr6 (115-236)||(19748568-19748688)
chr6 (115-238)||(15527882-15528004)
chr6 (115-238)||(17103430-17103552)
chr6 (119-238)||(17543502-17543620)
chr6 (37-115)||(7223750-7223828)
chr6 (37-115)||(11327378-11327456)
chr6 (37-115)||(19748568-19748646)
chr6 (76-226)||(31108351-31108500)
chr6 (115-237)||(7918123-7918244)
chr6 (37-115)||(7918166-7918244)
chr6 (37-115)||(15527926-15528004)
chr6 (37-111)||(17103430-17103504)
chr6 (115-236)||(22498214-22498334)
chr6 (76-192)||(20432410-20432526)
chr6 (41-115)||(17543546-17543620)
chr6 (76-201)||(33592959-33593083)
chr6 (37-103)||(22498268-22498334)
chr6 (119-226)||(26053080-26053186)
chr6 (119-226)||(26073133-26073239)
chr6 (41-103)||(26053124-26053186)
chr6 (41-103)||(26073177-26073239)
chr6 (1-99)||(31108354-31108452)
chr6 (111-240)||(4596623-4596751)
chr6 (118-226)||(33583450-33583557)
chr6 (40-115)||(3573716-3573791)
chr6 (1-99)||(20432425-20432523)
chr6 (115-201)||(27614464-27614550)
chr6 (1-99)||(33592983-33593080)
chr6 (117-189)||(27233119-27233191)
chr6 (39-103)||(27233127-27233191)
chr6 (40-99)||(33583499-33583557)
chr6 (118-200)||(3573709-3573791)
chr6 (37-103)||(27614484-27614550)
chr6 (124-173)||(8275366-8275415)
chr6 (46-95)||(8275366-8275415)
chr6 (118-191)||(23898049-23898121)
chr6 (76-201)||(31407505-31407630)
chr6 (26-96)||(1179049-1179119)
chr6 (104-174)||(1179049-1179119)
chr6 (118-201)||(30912214-30912297)
chr6 (45-103)||(17250299-17250359)
chr6 (1-37)||(3573716-3573752)
chr6 (33-97)||(4596687-4596751)
chr6 (157-197)||(18490516-18490556)
chr6 (123-179)||(17250299-17250357)
chr6 (76-115)||(21354949-21354988)
chr6 (40-99)||(23898049-23898107)
chr6 (76-171)||(28669499-28669594)
chr6 (123-173)||(4841665-4841715)
chr6 (45-95)||(4841665-4841715)
chr6 (154-236)||(21354949-21355030)
chr6 (144-177)||(4841726-4841759)
chr6 (66-99)||(4841726-4841759)
chr6 (140-201)||(23506102-23506163)
chr6 (300-333)||(30950075-30950108)
chr6 (3-96)||(31407510-31407603)
chr6 (108-164)||(7621820-7621876)
chr6 (30-86)||(7621820-7621876)
chr6 (1-37)||(21354952-21354988)
chr6 (1-93)||(28669502-28669594)
[»] chr5 (44 HSPs)
chr5 (76-236)||(41427615-41427774)
chr5 (76-235)||(15051872-15052024)
chr5 (1-114)||(41427618-41427731)
chr5 (1-114)||(15051914-15052021)
chr5 (115-226)||(18843950-18844060)
chr5 (118-235)||(27339962-27340078)
chr5 (37-115)||(18843950-18844028)
chr5 (117-235)||(41688441-41688558)
chr5 (118-236)||(43235106-43235223)
chr5 (90-201)||(19377813-19377924)
chr5 (40-115)||(43235106-43235181)
chr5 (108-201)||(22984605-22984702)
chr5 (39-115)||(41688482-41688558)
chr5 (115-226)||(18051317-18051427)
chr5 (30-89)||(22984643-22984702)
chr5 (115-201)||(19042236-19042322)
chr5 (37-103)||(19042256-19042322)
chr5 (117-226)||(19579180-19579289)
chr5 (12-88)||(19377813-19377889)
chr5 (39-103)||(19579180-19579244)
chr5 (76-174)||(15446408-15446506)
chr5 (37-103)||(20321178-20321244)
chr5 (115-188)||(20321178-20321251)
chr5 (115-172)||(23172265-23172322)
chr5 (37-94)||(23172265-23172322)
chr5 (1-96)||(15446411-15446506)
chr5 (118-201)||(24648247-24648330)
chr5 (40-99)||(27340019-27340078)
chr5 (76-201)||(13341505-13341630)
chr5 (37-103)||(18051361-18051427)
chr5 (134-200)||(22645536-22645602)
chr5 (115-235)||(43005634-43005753)
chr5 (1-99)||(13341530-13341627)
chr5 (154-192)||(15446408-15446446)
chr5 (37-97)||(43005693-43005753)
chr5 (40-99)||(24648247-24648306)
chr5 (56-102)||(22645556-22645602)
chr5 (38-99)||(17624837-17624898)
chr5 (116-177)||(17624837-17624898)
chr5 (34-87)||(30799629-30799682)
chr5 (112-165)||(30799629-30799682)
chr5 (1-37)||(18843992-18844028)
chr5 (124-172)||(38158101-38158149)
chr5 (46-94)||(38158101-38158149)
[»] scaffold0526 (2 HSPs)
scaffold0526 (76-236)||(8352-8511)
scaffold0526 (1-103)||(8355-8457)
[»] scaffold0027 (2 HSPs)
scaffold0027 (1-104)||(132942-133045)
scaffold0027 (78-179)||(132945-133046)
[»] scaffold2084 (2 HSPs)
scaffold2084 (79-237)||(28-184)
scaffold2084 (1-114)||(28-140)
[»] scaffold0017 (2 HSPs)
scaffold0017 (74-238)||(38299-38461)
scaffold0017 (1-115)||(38343-38456)
[»] scaffold0182 (2 HSPs)
scaffold0182 (74-201)||(24580-24707)
scaffold0182 (1-114)||(24585-24698)
[»] scaffold0016 (2 HSPs)
scaffold0016 (115-236)||(56199-56319)
scaffold0016 (37-96)||(56260-56319)
[»] scaffold0186 (2 HSPs)
scaffold0186 (115-237)||(8676-8797)
scaffold0186 (37-101)||(8676-8740)
[»] scaffold0061 (2 HSPs)
scaffold0061 (78-236)||(76083-76239)
scaffold0061 (1-103)||(76137-76238)
[»] scaffold0028 (2 HSPs)
scaffold0028 (108-187)||(145816-145895)
scaffold0028 (30-99)||(145816-145885)
[»] scaffold0417 (2 HSPs)
scaffold0417 (115-192)||(7272-7349)
scaffold0417 (37-115)||(7271-7349)
[»] scaffold0150 (2 HSPs)
scaffold0150 (111-188)||(33169-33246)
scaffold0150 (33-97)||(33169-33233)
[»] scaffold0001 (2 HSPs)
scaffold0001 (30-96)||(142857-142923)
scaffold0001 (108-174)||(142857-142923)
[»] scaffold0603 (2 HSPs)
scaffold0603 (118-191)||(8777-8850)
scaffold0603 (40-96)||(8794-8850)
[»] scaffold1178 (2 HSPs)
scaffold1178 (76-173)||(531-626)
scaffold1178 (1-148)||(534-664)
[»] scaffold0534 (2 HSPs)
scaffold0534 (126-200)||(916-990)
scaffold0534 (48-99)||(916-967)
[»] scaffold0048 (4 HSPs)
scaffold0048 (118-177)||(61146-61205)
scaffold0048 (40-99)||(61146-61205)
scaffold0048 (120-174)||(48497-48551)
scaffold0048 (42-96)||(48497-48551)
[»] scaffold0042 (2 HSPs)
scaffold0042 (118-191)||(93522-93596)
scaffold0042 (40-97)||(93539-93596)
[»] scaffold0510 (2 HSPs)
scaffold0510 (118-191)||(22-94)
scaffold0510 (40-99)||(36-94)
[»] scaffold0007 (1 HSPs)
scaffold0007 (152-192)||(220434-220474)


Alignment Details
Target: chr2 (Bit Score: 119; Significance: 9e-61; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 76 - 237
Target Start/End: Original strand, 974534 - 974695
Alignment:
Q  76 tcgattttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 175  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  974534 tcgattttgattgcgattttacgagtcccgacttcgctatcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttac 974633  T
Q  176 gagttt-cgattttgctactccctttctactcgaaagtaaagtcccgattttaataaccttgg 237  Q
    |||||| |||||||||||||||||||| ||| | ||||||||||||||| || ||||||||||    
T  974634 gagtttccgattttgctactccctttcgacttg-aagtaaagtcccgatattgataaccttgg 974695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 76 - 239
Target Start/End: Complemental strand, 20034155 - 20033993
Alignment:
Q  76 tcgattttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 175  Q
    |||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  20034155 tcgattttgattgcgattttacgagtcccgactttgctattctacatcgattctacaaaagtccttgagtaaaatccttcaattttgattgcgattttac 20034056  T
Q  176 gagtttcgattttgctactccctttctactcgaaagtaaagtcccgattttaataaccttggta 239  Q
    |||| ||||||||||||||||||||| ||| | |||||||||||||||||| ||||| ||||||    
T  20034055 gagtctcgattttgctactccctttcgacttg-aagtaaagtcccgattttgataactttggta 20033993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 76 - 225
Target Start/End: Complemental strand, 27524029 - 27523881
Alignment:
Q  76 tcgattttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 175  Q
    |||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  27524029 tcgattttgattgcaattttacgagtcccgactttgctatcctacatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttac 27523930  T
Q  176 gagtttcgattttgctactccctttctactcgaaagtaaagtcccgattt 225  Q
    ||||  |||||||||||||||||||| ||| | |||||||||||||||||    
T  27523929 gagtcccgattttgctactccctttcgacttg-aagtaaagtcccgattt 27523881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 27524026 - 27523913
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgag 100  Q
    ||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  27524026 attttgattgcaattttacgagtcccgactttgctatcctacatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgag 27523927  T
Q  101 tcctgactttgcta 114  Q
    ||| || |||||||    
T  27523926 tcccgattttgcta 27523913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 76 - 201
Target Start/End: Original strand, 34578085 - 34578210
Alignment:
Q  76 tcgattttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 175  Q
    |||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||| |||||||||| |||| ||||||||||||||||||     
T  34578085 tcgattttgattgcgattttacgagtcccgattttgctatcctacatcgattctacaaaagtccatgagtaaaatccttcaattttgattgcgattttat 34578184  T
Q  176 gagtttcgattttgctactccctttc 201  Q
    ||||  ||||||||||||||||||||    
T  34578185 gagtcccgattttgctactccctttc 34578210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 974537 - 974637
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgag 100  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  974537 attttgattgcgattttacgagtcccgacttcgctatcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgag 974636  T
Q  101 t 101  Q
    |    
T  974637 t 974637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 76 - 237
Target Start/End: Original strand, 7301983 - 7302138
Alignment:
Q  76 tcgattttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 175  Q
    |||||||||||||||||||| ||||||| ||||||||||      |||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  7301983 tcgattttgattgcgattttgcgagtcccgactttgctac-----atcgattctacaaaagtccttgagtaaaatccttcgattttgattgcaattttac 7302077  T
Q  176 gagtttcgattttgctactccctttctactcgaaagtaaagtcccgattttaataaccttgg 237  Q
    ||||  |||||||||||| ||| ||| ||| | |||||||||||||||||| ||||||||||    
T  7302078 gagtcccgattttgctaccccccttcaacttg-aagtaaagtcccgattttgataaccttgg 7302138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 20034152 - 20034051
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgag 100  Q
    ||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  20034152 attttgattgcgattttacgagtcccgactttgctattctacatcgattctacaaaagtccttgagtaaaatccttcaattttgattgcgattttacgag 20034053  T
Q  101 tc 102  Q
    ||    
T  20034052 tc 20034051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 115 - 238
Target Start/End: Original strand, 20063958 - 20064080
Alignment:
Q  115 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaagtaa 214  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||| || |  ||||||    
T  20063958 tcctatatcgattctacaaaagtccttgagtaaaattcttcgattttgattgcgattttacgagtctcgattttgctattccctttcaac-ctgaagtaa 20064056  T
Q  215 agtcccgattttaataaccttggt 238  Q
    || ||||||||| | |||||||||    
T  20064057 agccccgattttgacaaccttggt 20064080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 76 - 226
Target Start/End: Complemental strand, 21869254 - 21869105
Alignment:
Q  76 tcgattttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 175  Q
    ||||||||||||| |||||||||||||  || ||||||||| ||||||||||||||||||||| |||| |||||| |||||||||| ||||||||||||     
T  21869254 tcgattttgattgggattttacgagtctcgattttgctatcatatatcgattctacaaaagtcattgaataaaatccttcgattttaattgcgattttaa 21869155  T
Q  176 gagtttcgattttgctactccctttctactcgaaagtaaagtcccgatttt 226  Q
    ||||  ||||||| ||| |||||||| ||| | ||||||||||||||||||    
T  21869154 gagtcccgatttttctattccctttcgacttg-aagtaaagtcccgatttt 21869105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 34578088 - 34578201
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgag 100  Q
    ||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||| |||||||||| |||| |||||||||||||||||| |||    
T  34578088 attttgattgcgattttacgagtcccgattttgctatcctacatcgattctacaaaagtccatgagtaaaatccttcaattttgattgcgattttatgag 34578187  T
Q  101 tcctgactttgcta 114  Q
    ||| || |||||||    
T  34578188 tcccgattttgcta 34578201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 7301986 - 7302094
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgag 100  Q
    ||||||||||||||||| ||||||| ||||||||||      |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  7301986 attttgattgcgattttgcgagtcccgactttgctac-----atcgattctacaaaagtccttgagtaaaatccttcgattttgattgcaattttacgag 7302080  T
Q  101 tcctgactttgcta 114  Q
    ||| || |||||||    
T  7302081 tcccgattttgcta 7302094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 118 - 225
Target Start/End: Complemental strand, 19262207 - 19262101
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaagtaaagt 217  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||  ||||||||||| |||| ||| ||| | |||||||||    
T  19262207 tatatcgattctacaaaagtccttgagtaaaatctttcgattttgattgcgattttacgagtcccgattttgctattcccattcgacttg-aagtaaagt 19262109  T
Q  218 cccgattt 225  Q
     |||||||    
T  19262108 tccgattt 19262101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 115
Target Start/End: Original strand, 20063958 - 20064036
Alignment:
Q  37 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcctgactttgctat 115  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  || ||||||||    
T  20063958 tcctatatcgattctacaaaagtccttgagtaaaattcttcgattttgattgcgattttacgagtctcgattttgctat 20064036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 21869251 - 21869149
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgag 100  Q
    |||||||||| |||||||||||||  || ||||||||| ||||||||||||||||||||| |||| |||||| |||||||||| |||||||||||| |||    
T  21869251 attttgattgggattttacgagtctcgattttgctatcatatatcgattctacaaaagtcattgaataaaatccttcgattttaattgcgattttaagag 21869152  T
Q  101 tcc 103  Q
    |||    
T  21869151 tcc 21869149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 115 - 200
Target Start/End: Original strand, 1405018 - 1405103
Alignment:
Q  115 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactcccttt 200  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||  ||||||||||| |||||||    
T  1405018 tcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattttatgagtaccgattttgctattcccttt 1405103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 112 - 236
Target Start/End: Original strand, 19245821 - 19245944
Alignment:
Q  112 ctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaag 211  Q
    ||||||||||||||||||||||||||  || |||||||| ||| |||||||||||||||||||||| ||| |||||||||| |||||||| ||| | |||    
T  19245821 ctatcctatatcgattctacaaaagtagttaagtaaaatccttagattttgattgcgattttacgatttttgattttgctattccctttcaacttg-aag 19245919  T
Q  212 taaagtcccgattttaataaccttg 236  Q
     ||| |||||||||| | |||||||    
T  19245920 caaaatcccgattttgacaaccttg 19245944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 40 - 115
Target Start/End: Complemental strand, 19262207 - 19262132
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcctgactttgctat 115  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| || ||||||||    
T  19262207 tatatcgattctacaaaagtccttgagtaaaatctttcgattttgattgcgattttacgagtcccgattttgctat 19262132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 117 - 200
Target Start/End: Complemental strand, 31237868 - 31237785
Alignment:
Q  117 ctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactcccttt 200  Q
    ||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||||||| ||| |||||||    
T  31237868 ctatatcgattttacaaaagtccttgagtaaaatccttcgatattgattgcgattttacgagtcccgattttactattcccttt 31237785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 115
Target Start/End: Original strand, 1405018 - 1405096
Alignment:
Q  37 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcctgactttgctat 115  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||| | || ||||||||    
T  1405018 tcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattttatgagtaccgattttgctat 1405096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 39 - 103
Target Start/End: Complemental strand, 31237868 - 31237804
Alignment:
Q  39 ctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcc 103  Q
    ||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  31237868 ctatatcgattttacaaaagtccttgagtaaaatccttcgatattgattgcgattttacgagtcc 31237804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 30433050 - 30433116
Alignment:
Q  37 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcc 103  Q
    |||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||| ||||||    
T  30433050 tcctatatcgattctataaaagtccttgagtaaaatcattcgattttgattgcgattttatgagtcc 30433116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 115 - 188
Target Start/End: Original strand, 30433050 - 30433123
Alignment:
Q  115 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgatttt 188  Q
    |||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||| ||||  |||||||    
T  30433050 tcctatatcgattctataaaagtccttgagtaaaatcattcgattttgattgcgattttatgagtcccgatttt 30433123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 19245821 - 19245886
Alignment:
Q  34 ctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    ||||||||||||||||||||||||||  || |||||||| ||| ||||||||||||||||||||||    
T  19245821 ctatcctatatcgattctacaaaagtagttaagtaaaatccttagattttgattgcgattttacga 19245886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 42 - 103
Target Start/End: Original strand, 36430088 - 36430149
Alignment:
Q  42 tatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcc 103  Q
    |||||||||||||||| |  |||||||| || ||||||||||||||||||||||||||||||    
T  36430088 tatcgattctacaaaaattattgagtaatatccttcgattttgattgcgattttacgagtcc 36430149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 201
Target Start/End: Complemental strand, 25539036 - 25538953
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttc 201  Q
    ||||||||||||||||||||  || |||||||| |||  ||||||||||||||||||||||   ||||||| ||| ||||||||    
T  25539036 tatatcgattctacaaaagtagttcagtaaaatcctttaattttgattgcgattttacgagacccgatttttctattccctttc 25538953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 179
Target Start/End: Original strand, 36430088 - 36430147
Alignment:
Q  120 tatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagt 179  Q
    |||||||||||||||| |  |||||||| || ||||||||||||||||||||||||||||    
T  36430088 tatcgattctacaaaaattattgagtaatatccttcgattttgattgcgattttacgagt 36430147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 118 - 191
Target Start/End: Original strand, 16767023 - 16767097
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga-gtttcgattttgct 191  Q
    ||||||||||||| ||||||  ||||||||||| |||| |||||||||||||||||| ||  |||||||||||||    
T  16767023 tatatcgattctataaaagtagttgagtaaaatccttcaattttgattgcgattttatgatttttcgattttgct 16767097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 119 - 235
Target Start/End: Original strand, 8428461 - 8428576
Alignment:
Q  119 atatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaagtaaagtc 218  Q
    |||| |||||||||||| |  ||||| ||||| |||||||||||||||||||||||  | ||| |||||| ||| |||||||| || | |||| ||| ||    
T  8428461 atattgattctacaaaaatagttgagcaaaatccttcgattttgattgcgattttagaatttttgatttttctattccctttcgac-ctaaagcaaaatc 8428559  T
Q  219 ccgattttaataacctt 235  Q
    |||||||| | ||||||    
T  8428560 ccgattttgacaacctt 8428576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 16767023 - 16767079
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgatttta 96  Q
    ||||||||||||| ||||||  ||||||||||| |||| ||||||||||||||||||    
T  16767023 tatatcgattctataaaagtagttgagtaaaatccttcaattttgattgcgatttta 16767079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 40 - 100
Target Start/End: Complemental strand, 25539036 - 25538976
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgag 100  Q
    ||||||||||||||||||||  || |||||||| |||  ||||||||||||||||||||||    
T  25539036 tatatcgattctacaaaagtagttcagtaaaatcctttaattttgattgcgattttacgag 25538976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 177
Target Start/End: Complemental strand, 27749407 - 27749341
Alignment:
Q  111 gctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 177  Q
    |||||| ||| |||||||||||||| |||||||||||| |  ||| |||| ||||||||||||||||    
T  27749407 gctatcgtatttcgattctacaaaaatccttgagtaaactcattcaatttagattgcgattttacga 27749341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 27749407 - 27749341
Alignment:
Q  33 gctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    |||||| ||| |||||||||||||| |||||||||||| |  ||| |||| ||||||||||||||||    
T  27749407 gctatcgtatttcgattctacaaaaatccttgagtaaactcattcaatttagattgcgattttacga 27749341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 34167548 - 34167610
Alignment:
Q  140 ttgagtaaaatacttcgatttt-gattgcgattttacgagtttcgattttgctactccctttc 201  Q
    |||||||||||  |||||| || |||||||||||||||| |||||||||||||| ||||||||    
T  34167548 ttgagtaaaatcattcgatgttagattgcgattttacgattttcgattttgctattccctttc 34167610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 210
Target Start/End: Complemental strand, 13502564 - 13502472
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaa 210  Q
    ||||| |||||||||||| |  |||| ||| || |||| ||||||||| ||||||||||| |||||||||| ||  |||||||| ||| ||||    
T  13502564 tatatagattctacaaaaatagttgactaatatccttcaattttgattacgattttacgattttcgattttactcttccctttccacttgaaa 13502472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 8428461 - 8428516
Alignment:
Q  41 atatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgatttta 96  Q
    |||| |||||||||||| |  ||||| ||||| |||||||||||||||||||||||    
T  8428461 atattgattctacaaaaatagttgagcaaaatccttcgattttgattgcgatttta 8428516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 189
Target Start/End: Original strand, 15627991 - 15628053
Alignment:
Q  127 tctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttg 189  Q
    |||||||||||  ||||||||||  |||||||||||||| | ||||||| | |||||||||||    
T  15627991 tctacaaaagtagttgagtaaaaaccttcgattttgatttccattttacaattttcgattttg 15628053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 191
Target Start/End: Original strand, 27407029 - 27407103
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga-gtttcgattttgct 191  Q
    ||||| |||| | |||||||  ||||||||||| ||| ||||||||||||||| ||||||  |||||||||||||    
T  27407029 tatattgattatccaaaagtagttgagtaaaattcttggattttgattgcgatattacgatttttcgattttgct 27407103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 191
Target Start/End: Complemental strand, 35565848 - 35565772
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaa---aatacttcgattttgattgcgattttacgagtttcgattttgct 191  Q
    ||||||||||||||||||||  ||||||||   ||| ||||||||||  |||||||||||| | | |||||||||||    
T  35565848 tatatcgattctacaaaagtagttgagtaataaaatccttcgattttagttgcgattttacaattatcgattttgct 35565772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 188
Target Start/End: Complemental strand, 15588724 - 15588676
Alignment:
Q  140 ttgagtaaaatacttcgattttgattgcgattttacgagtttcgatttt 188  Q
    ||||||||||| ||||||||||| ||||||||||| || | ||||||||    
T  15588724 ttgagtaaaatccttcgattttggttgcgattttatgattgtcgatttt 15588676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 19262168 - 19262132
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctat 37  Q
    ||||||||||||||||||||||||| || ||||||||    
T  19262168 attttgattgcgattttacgagtcccgattttgctat 19262132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 115; Significance: 2e-58; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 76 - 238
Target Start/End: Original strand, 2040315 - 2040476
Alignment:
Q  76 tcgattttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 175  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  2040315 tcgattttgattgcgattttacgagtcccgactttgctatcctacatcgattctacaaaagtccatgagtaaaatccttcgattttgattgcgattttac 2040414  T
Q  176 gagtttcgattttgctactccctttctactcgaaagtaaagtcccgattttaataaccttggt 238  Q
    ||||| |||||||||||||| ||||| ||| | |||||||||||||||||| ||||| |||||    
T  2040415 gagttccgattttgctactctctttcgacttg-aagtaaagtcccgattttcataactttggt 2040476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 78 - 237
Target Start/End: Complemental strand, 40541751 - 40541593
Alignment:
Q  78 gattttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 177  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||| ||||||  ||| |||||||||||||||||||||    
T  40541751 gattttgattgcgattttacgagtcccgactttgctatcttatatcgattctacagaagtccttgaataaaatctttcaattttgattgcgattttacga 40541652  T
Q  178 gtttcgattttgctactccctttctactcgaaagtaaagtcccgattttaataaccttgg 237  Q
    ||  ||||||||||||| |||||| ||| | |||||||||||||||||| ||||||||||    
T  40541651 gtcccgattttgctacttcctttcgacttg-aagtaaagtcccgattttgataaccttgg 40541593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 2040318 - 2040431
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgag 100  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  2040318 attttgattgcgattttacgagtcccgactttgctatcctacatcgattctacaaaagtccatgagtaaaatccttcgattttgattgcgattttacgag 2040417  T
Q  101 tcctgactttgcta 114  Q
    | | || |||||||    
T  2040418 ttccgattttgcta 2040431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 76 - 231
Target Start/End: Original strand, 16752219 - 16752373
Alignment:
Q  76 tcgattttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 175  Q
    ||||||||||||||||| |||| ||||| ||||||||| ||||| ||| ||||||||||| |||||||||||||| ||||||||||| ||||||||||||    
T  16752219 tcgattttgattgcgatgttaccagtcccgactttgctttcctacatcaattctacaaaattccttgagtaaaatccttcgattttgtttgcgattttac 16752318  T
Q  176 gagtttcgattttgctactccctttctactcgaaagtaaagtcccgattttaataa 231  Q
    ||||  | |||||||||||||||||| ||| | ||||||||| || ||||| ||||    
T  16752319 gagtcccaattttgctactccctttcgacttg-aagtaaagttccaattttgataa 16752373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 40541750 - 40541637
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgag 100  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||| ||||||  ||| ||||||||||||||||||||||    
T  40541750 attttgattgcgattttacgagtcccgactttgctatcttatatcgattctacagaagtccttgaataaaatctttcaattttgattgcgattttacgag 40541651  T
Q  101 tcctgactttgcta 114  Q
    ||| || |||||||    
T  40541650 tcccgattttgcta 40541637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 115 - 226
Target Start/End: Original strand, 45403264 - 45403374
Alignment:
Q  115 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaagtaa 214  Q
    |||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||| ||  |||| |||    
T  45403264 tcctatatcgattctacaaaagtctttaagtaaaatccttcgattttgattgcgattttacgagtctcgattttgctattccctttcgacgtgaaa-taa 45403362  T
Q  215 agtcccgatttt 226  Q
    ||||||||||||    
T  45403363 agtcccgatttt 45403374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 16752222 - 16752324
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgag 100  Q
    |||||||||||||| |||| ||||| ||||||||| ||||| ||| ||||||||||| |||||||||||||| ||||||||||| |||||||||||||||    
T  16752222 attttgattgcgatgttaccagtcccgactttgctttcctacatcaattctacaaaattccttgagtaaaatccttcgattttgtttgcgattttacgag 16752321  T
Q  101 tcc 103  Q
    |||    
T  16752322 tcc 16752324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 39 - 115
Target Start/End: Complemental strand, 7489175 - 7489099
Alignment:
Q  39 ctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcctgactttgctat 115  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| | ||||||||    
T  7489175 ctatatcgattctacaaaagtccttgagtaaaatcctccgattttgattgcgattttacgagtcctaattttgctat 7489099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 115 - 226
Target Start/End: Original strand, 5922283 - 5922393
Alignment:
Q  115 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaagtaa 214  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||  |||  |||||||||| |||||||| || |  ||||||    
T  5922283 tcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgac-ctgaagtaa 5922381  T
Q  215 agtcccgatttt 226  Q
    ||||||||||||    
T  5922382 agtcccgatttt 5922393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 117 - 236
Target Start/End: Complemental strand, 7489175 - 7489057
Alignment:
Q  117 ctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaagtaaag 216  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    ||||||||| | |||||| ||| | ||||||||    
T  7489175 ctatatcgattctacaaaagtccttgagtaaaatcctccgattttgattgcgattttacgagtcctaattttgctatttcctttcgacttg-aagtaaag 7489077  T
Q  217 tcccgattttaataaccttg 236  Q
    ||| |||||| | |||||||    
T  7489076 tcctgattttgacaaccttg 7489057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 115 - 201
Target Start/End: Complemental strand, 24414181 - 24414095
Alignment:
Q  115 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttc 201  Q
    ||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||| |  ||||||||| ||||||||    
T  24414181 tcctatatcgattctacaaaaattcttgagtaaaatccttcgattttgattgcgattttacgagtctaaattttgctattccctttc 24414095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 115
Target Start/End: Original strand, 45403264 - 45403342
Alignment:
Q  37 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcctgactttgctat 115  Q
    |||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||  || ||||||||    
T  45403264 tcctatatcgattctacaaaagtctttaagtaaaatccttcgattttgattgcgattttacgagtctcgattttgctat 45403342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 124 - 201
Target Start/End: Original strand, 7262006 - 7262083
Alignment:
Q  124 gattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttc 201  Q
    ||||||||||||||||||||||||||| |||  |||||||||||||||||||||||  ||||||||||||| ||||||    
T  7262006 gattctacaaaagtccttgagtaaaatcctttaattttgattgcgattttacgagtcccgattttgctacttcctttc 7262083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 117 - 238
Target Start/End: Original strand, 11879837 - 11879957
Alignment:
Q  117 ctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaagtaaag 216  Q
    |||||||||||||| |||||| |||  ||||||| ||||||||||||||||||||||||||||| ||||||| ||| |||||||  || |  |||||||     
T  11879837 ctatatcgattctataaaagttcttaggtaaaatccttcgattttgattgcgattttacgagttccgattttactattcccttttgac-ctgaagtaaaa 11879935  T
Q  217 tcccgattttaataaccttggt 238  Q
    |||||||||| | |||||||||    
T  11879936 tcccgattttgacaaccttggt 11879957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 117 - 238
Target Start/End: Original strand, 11897253 - 11897373
Alignment:
Q  117 ctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaagtaaag 216  Q
    |||||||||||||| |||||| |||  ||||||| ||||||||||||||||||||||||||||| ||||||| ||| |||||||  || |  |||||||     
T  11897253 ctatatcgattctataaaagttcttaggtaaaatccttcgattttgattgcgattttacgagttccgattttactattcccttttgac-ctgaagtaaaa 11897351  T
Q  217 tcccgattttaataaccttggt 238  Q
    |||||||||| | |||||||||    
T  11897352 tcccgattttgacaaccttggt 11897373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 119 - 200
Target Start/End: Complemental strand, 19704347 - 19704266
Alignment:
Q  119 atatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactcccttt 200  Q
    ||||||||||||||| |||||||||||||| | ||| ||||||||||||||||||||||||  ||||||||||| |||||||    
T  19704347 atatcgattctacaacagtccttgagtaaattcctttgattttgattgcgattttacgagtcccgattttgctattcccttt 19704266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 37 - 102
Target Start/End: Complemental strand, 24414181 - 24414116
Alignment:
Q  37 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtc 102  Q
    ||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||    
T  24414181 tcctatatcgattctacaaaaattcttgagtaaaatccttcgattttgattgcgattttacgagtc 24414116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 115 - 187
Target Start/End: Original strand, 32424569 - 32424641
Alignment:
Q  115 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattt 187  Q
    |||||| |||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||| ||||||    
T  32424569 tcctatctcgattctacaaaactccttgagtaaaatccttcgattttaattgcgattttacgagttccgattt 32424641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 37 - 115
Target Start/End: Original strand, 5922283 - 5922361
Alignment:
Q  37 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcctgactttgctat 115  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||  || |||| ||||||||    
T  5922283 tcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctat 5922361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 41 - 115
Target Start/End: Complemental strand, 19704347 - 19704273
Alignment:
Q  41 atatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcctgactttgctat 115  Q
    ||||||||||||||| |||||||||||||| | ||| |||||||||||||||||||||||||| || ||||||||    
T  19704347 atatcgattctacaacagtccttgagtaaattcctttgattttgattgcgattttacgagtcccgattttgctat 19704273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 49 - 115
Target Start/End: Complemental strand, 27836181 - 27836115
Alignment:
Q  49 tctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcctgactttgctat 115  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |||| | ||||||||    
T  27836181 tctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgaatcctaattttgctat 27836115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 46 - 114
Target Start/End: Original strand, 7262006 - 7262074
Alignment:
Q  46 gattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcctgactttgcta 114  Q
    ||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||| || |||||||    
T  7262006 gattctacaaaagtccttgagtaaaatcctttaattttgattgcgattttacgagtcccgattttgcta 7262074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 32424569 - 32424633
Alignment:
Q  37 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagt 101  Q
    |||||| |||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||    
T  32424569 tcctatctcgattctacaaaactccttgagtaaaatccttcgattttaattgcgattttacgagt 32424633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 103
Target Start/End: Original strand, 15294907 - 15294970
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcc 103  Q
    ||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||    
T  15294907 tatatggattctacaaaagttcttgagtaaaatccttcgattttgattgcgattttaggagtcc 15294970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 103
Target Start/End: Original strand, 15475276 - 15475339
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcc 103  Q
    ||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||    
T  15475276 tatatggattctacaaaagttcttgagtaaaatccttcgattttgattgcgattttaggagtcc 15475339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 118 - 188
Target Start/End: Original strand, 15294907 - 15294977
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgatttt 188  Q
    ||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||  |||||||    
T  15294907 tatatggattctacaaaagttcttgagtaaaatccttcgattttgattgcgattttaggagtcccgatttt 15294977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 118 - 188
Target Start/End: Original strand, 15475276 - 15475346
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgatttt 188  Q
    ||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||  |||||||    
T  15475276 tatatggattctacaaaagttcttgagtaaaatccttcgattttgattgcgattttaggagtcccgatttt 15475346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 27836181 - 27836131
Alignment:
Q  127 tctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 177  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  27836181 tctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacga 27836131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 118 - 191
Target Start/End: Original strand, 17647235 - 17647308
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgct 191  Q
    |||||||||||||||||| |  ||||||||||| ||||||||||||||||||||||| || | |||||||||||    
T  17647235 tatatcgattctacaaaactagttgagtaaaatccttcgattttgattgcgattttatgattgtcgattttgct 17647308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 101
Target Start/End: Original strand, 11879837 - 11879899
Alignment:
Q  39 ctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagt 101  Q
    |||||||||||||| |||||| |||  ||||||| ||||||||||||||||||||||||||||    
T  11879837 ctatatcgattctataaaagttcttaggtaaaatccttcgattttgattgcgattttacgagt 11879899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 101
Target Start/End: Original strand, 11897253 - 11897315
Alignment:
Q  39 ctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagt 101  Q
    |||||||||||||| |||||| |||  ||||||| ||||||||||||||||||||||||||||    
T  11897253 ctatatcgattctataaaagttcttaggtaaaatccttcgattttgattgcgattttacgagt 11897315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 126 - 200
Target Start/End: Original strand, 17566344 - 17566418
Alignment:
Q  126 ttctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactcccttt 200  Q
    ||||||||||||  ||||||||||| |||||||||||||||| ||||||||| |||| ||||||||  |||||||    
T  17566344 ttctacaaaagtagttgagtaaaattcttcgattttgattgcaattttacgattttcaattttgctcttcccttt 17566418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 118 - 191
Target Start/End: Original strand, 6811057 - 6811130
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgct 191  Q
    |||||| |||||||||||||  |||| |||||| ||||||||||| |||||||||||||| | |||||||||||    
T  6811057 tatatctattctacaaaagtagttgattaaaattcttcgattttggttgcgattttacgattgtcgattttgct 6811130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 17647235 - 17647291
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgatttta 96  Q
    |||||||||||||||||| |  ||||||||||| |||||||||||||||||||||||    
T  17647235 tatatcgattctacaaaactagttgagtaaaatccttcgattttgattgcgatttta 17647291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 15761249 - 15761190
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 177  Q
    ||||||||||||||||||||  ||||||||||| |||||||||  |||||||||||||||    
T  15761249 tatatcgattctacaaaagtaattgagtaaaatccttcgatttatattgcgattttacga 15761190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 15761249 - 15761190
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    ||||||||||||||||||||  ||||||||||| |||||||||  |||||||||||||||    
T  15761249 tatatcgattctacaaaagtaattgagtaaaatccttcgatttatattgcgattttacga 15761190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 188
Target Start/End: Complemental strand, 29384196 - 29384133
Alignment:
Q  125 attctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgatttt 188  Q
    |||||||||||||  ||||||||||| ||||||||||| |||||||||||||| | ||||||||    
T  29384196 attctacaaaagtagttgagtaaaatccttcgattttggttgcgattttacgattgtcgatttt 29384133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 191
Target Start/End: Original strand, 15231859 - 15231932
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgct 191  Q
    ||||||||||||||||||||  |||||||||||  | |||||||  |||||||||||||| | |||||||||||    
T  15231859 tatatcgattctacaaaagtagttgagtaaaatcgtacgattttagttgcgattttacgattgtcgattttgct 15231932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 235
Target Start/End: Original strand, 23142412 - 23142528
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaagtaaagt 217  Q
    ||||||||||||||||||||  |||| ||||||  ||||||||  ||||||||||||||| |  || |||||||| |||||||| | | |||| ||||||    
T  23142412 tatatcgattctacaaaagtttttgactaaaatcattcgatttaaattgcgattttacgattaccggttttgctattccctttcgaattgaaa-taaagt 23142510  T
Q  218 cccgattttaataacctt 235  Q
    || |||||| | ||||||    
T  23142511 cctgattttgacaacctt 23142528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 29384196 - 29384144
Alignment:
Q  47 attctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    |||||||||||||  ||||||||||| ||||||||||| ||||||||||||||    
T  29384196 attctacaaaagtagttgagtaaaatccttcgattttggttgcgattttacga 29384144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 6811057 - 6811116
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    |||||| |||||||||||||  |||| |||||| ||||||||||| ||||||||||||||    
T  6811057 tatatctattctacaaaagtagttgattaaaattcttcgattttggttgcgattttacga 6811116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 99
Target Start/End: Original strand, 17566344 - 17566395
Alignment:
Q  48 ttctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    ||||||||||||  ||||||||||| |||||||||||||||| |||||||||    
T  17566344 ttctacaaaagtagttgagtaaaattcttcgattttgattgcaattttacga 17566395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 15231859 - 15231918
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    ||||||||||||||||||||  |||||||||||  | |||||||  ||||||||||||||    
T  15231859 tatatcgattctacaaaagtagttgagtaaaatcgtacgattttagttgcgattttacga 15231918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 23142412 - 23142471
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    ||||||||||||||||||||  |||| ||||||  ||||||||  |||||||||||||||    
T  23142412 tatatcgattctacaaaagtttttgactaaaatcattcgatttaaattgcgattttacga 23142471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 118 - 201
Target Start/End: Complemental strand, 24056461 - 24056378
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttc 201  Q
    ||||| |||||||||||| |  ||||||||||| |||||||||||||| | |||||| ||  ||| ||||||||  ||||||||    
T  24056461 tatattgattctacaaaactagttgagtaaaatccttcgattttgattaccattttatgatattcaattttgctcttccctttc 24056378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 188
Target Start/End: Complemental strand, 22910094 - 22910024
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgatttt 188  Q
    |||||||||||||||||| |  |||| |||||| |||| |||| | |||||||||||||| | ||||||||    
T  22910094 tatatcgattctacaaaaatagttgaataaaatccttcaatttcggttgcgattttacgattgtcgatttt 22910024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 177
Target Start/End: Complemental strand, 26575018 - 26574949
Alignment:
Q  108 tttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 177  Q
    |||||||||||||||  |||||||| || |  ||  ||||||| |||| |||||||||||||||||||||    
T  26575018 tttgctatcctatatgaattctacataaatagttaggtaaaatccttcaattttgattgcgattttacga 26574949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 26575018 - 26574949
Alignment:
Q  30 tttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    |||||||||||||||  |||||||| || |  ||  ||||||| |||| |||||||||||||||||||||    
T  26575018 tttgctatcctatatgaattctacataaatagttaggtaaaatccttcaattttgattgcgattttacga 26574949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 7489135 - 7489099
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctat 37  Q
    |||||||||||||||||||||||||| | ||||||||    
T  7489135 attttgattgcgattttacgagtcctaattttgctat 7489099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 19704309 - 19704273
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctat 37  Q
    ||||||||||||||||||||||||| || ||||||||    
T  19704309 attttgattgcgattttacgagtcccgattttgctat 19704273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 24056461 - 24056405
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgatttta 96  Q
    ||||| |||||||||||| |  ||||||||||| |||||||||||||| | ||||||    
T  24056461 tatattgattctacaaaactagttgagtaaaatccttcgattttgattaccatttta 24056405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 26879787 - 26879831
Alignment:
Q  157 attttgattgcgattttacgagtttcgattttgctactccctttc 201  Q
    ||||||||||||||||||||| ||| |||||||||  ||||||||    
T  26879787 attttgattgcgattttacgatttttgattttgctgatccctttc 26879831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 112; Significance: 1e-56; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 76 - 239
Target Start/End: Complemental strand, 8560390 - 8560228
Alignment:
Q  76 tcgattttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 175  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||  ||||||||||||| ||||||||||||||||||||| ||    
T  8560390 tcgattttgattgcgattttacgagtcccgactttgctatcctatattgattctacaaaaaaccttgagtaaaatccttcgattttgattgcgatttcac 8560291  T
Q  176 gagtttcgattttgctactccctttctactcgaaagtaaagtcccgattttaataaccttggta 239  Q
    |||| ||||||||||||||||||||  ||| | |||||||||||||||||| ||||||||||||    
T  8560290 gagtctcgattttgctactcccttttgacttg-aagtaaagtcccgattttgataaccttggta 8560228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 78 - 225
Target Start/End: Complemental strand, 8592330 - 8592184
Alignment:
Q  78 gattttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 177  Q
    ||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  8592330 gattttgattgcgattttacgagacccgattttgctatcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacga 8592231  T
Q  178 gtttcgattttgctactccctttctactcgaaagtaaagtcccgattt 225  Q
    || |||||||||||| | |||||| ||| | |||||||||||||||||    
T  8592230 gtctcgattttgctatttcctttcgacttg-aagtaaagtcccgattt 8592184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 76 - 235
Target Start/End: Original strand, 18014187 - 18014345
Alignment:
Q  76 tcgattttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 175  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| || || ||||||||||||||||||| ||||||||||||||||||||||||    
T  18014187 tcgattttgattgcgattttacgagtcccgactttgctatcctatatcggttttataaaagtccttgagtaaaatccttcgattttgattgcgattttac 18014286  T
Q  176 gagtttcgattttgctactccctttctactcgaaagtaaagtcccgattttaataacctt 235  Q
    ||||  | ||||||||||||| |||  ||| | |||||||||||||||||| ||||||||    
T  18014287 gagtcccaattttgctactccattttaacttg-aagtaaagtcccgattttgataacctt 18014345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 76 - 226
Target Start/End: Original strand, 3041419 - 3041568
Alignment:
Q  76 tcgattttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 175  Q
    |||||||| ||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3041419 tcgattttaattgcgattttacgagtcccgactttgctatcctacatcgtttctacaaaagtccttgagtaaaatccttcgattttgattgcgattttac 3041518  T
Q  176 gagtttcgattttgctactccctttctactcgaaagtaaagtcccgatttt 226  Q
    ||||  ||||||||||||||| |||| ||| | ||||||| ||||||||||    
T  3041519 gagtcccgattttgctactccatttcgacttg-aagtaaaatcccgatttt 3041568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 76 - 236
Target Start/End: Original strand, 22971005 - 22971163
Alignment:
Q  76 tcgattttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 175  Q
    |||||||||||||| ||||||||||||  ||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22971005 tcgattttgattgcaattttacgagtcgggactttgctatcctacatcaattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttac 22971104  T
Q  176 gagtttcgattttgctactccctttctactcgaaagtaaagtcccgattttaataaccttg 236  Q
    ||||  ||||||||||||| |||||  ||| | |||||||||||| ||||| |||||||||    
T  22971105 gagtcccgattttgctact-ccttttaacttg-aagtaaagtcccaattttgataaccttg 22971163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 76 - 234
Target Start/End: Original strand, 19348749 - 19348906
Alignment:
Q  76 tcgattttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 175  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||| || |||||||||| | |||||| |||| |||||||||||||||||||    
T  19348749 tcgattttgattgcgattttacgagtcccgaatttgctatcctatatcgattttataaaagtccttcaataaaatccttccattttgattgcgattttac 19348848  T
Q  176 gagtttcgattttgctactccctttctactcgaaagtaaagtcccgattttaataacct 234  Q
    |||| ||||||||||||||||||||  ||| | |||||||||| | ||||| |||||||    
T  19348849 gagtctcgattttgctactcccttttgacttg-aagtaaagtctcaattttgataacct 19348906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 8592329 - 8592215
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgag 100  Q
    |||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8592329 attttgattgcgattttacgagacccgattttgctatcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgag 8592230  T
Q  101 tcctgactttgctat 115  Q
    ||  || ||||||||    
T  8592229 tctcgattttgctat 8592215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 3041422 - 3041535
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgag 100  Q
    ||||| ||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  3041422 attttaattgcgattttacgagtcccgactttgctatcctacatcgtttctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgag 3041521  T
Q  101 tcctgactttgcta 114  Q
    ||| || |||||||    
T  3041522 tcccgattttgcta 3041535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 79 - 236
Target Start/End: Complemental strand, 20766831 - 20766675
Alignment:
Q  79 attttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgag 178  Q
    |||||||||| ||||||| |||||| || |||||||| ||||||||||||| |||||| |||||||||||||  ||||||||||||||||||||||||||    
T  20766831 attttgattgtgattttatgagtcccgattttgctatgctatatcgattctccaaaagcccttgagtaaaatttttcgattttgattgcgattttacgag 20766732  T
Q  179 tttcgattttgctactccctttctactcgaaagtaaagtcccgattttaataaccttg 236  Q
    | ||||||||||||||| ||||| | | | |||||||||||||||||| | |||||||    
T  20766731 tctcgattttgctactctctttcgagttg-aagtaaagtcccgattttgacaaccttg 20766675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 18014190 - 18014292
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgag 100  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| || || ||||||||||||||||||| |||||||||||||||||||||||||||    
T  18014190 attttgattgcgattttacgagtcccgactttgctatcctatatcggttttataaaagtccttgagtaaaatccttcgattttgattgcgattttacgag 18014289  T
Q  101 tcc 103  Q
    |||    
T  18014290 tcc 18014292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 22971008 - 22971121
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgag 100  Q
    ||||||||||| ||||||||||||  ||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  22971008 attttgattgcaattttacgagtcgggactttgctatcctacatcaattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgag 22971107  T
Q  101 tcctgactttgcta 114  Q
    ||| || |||||||    
T  22971108 tcccgattttgcta 22971121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 76 - 226
Target Start/End: Complemental strand, 21553825 - 21553677
Alignment:
Q  76 tcgattttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaata-cttcgattttgattgcgatttta 174  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||| | ||||||||||||||||||  |||    
T  21553825 tcgattttgattgcgattttacgagtcccgactttgctatcctatatcaattctacaaaagtccttgaataaaaaaccttcgattttgattgcga--tta 21553728  T
Q  175 cgagtttcgattttgctactccctttctactcgaaagtaaagtcccgatttt 226  Q
    | |||  ||||||| |||||||||||| | | | ||||||||||||||||||    
T  21553727 ccagtcccgatttttctactccctttcgatttg-aagtaaagtcccgatttt 21553677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 8560387 - 8560286
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgag 100  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||  ||||||||||||| ||||||||||||||||||||| |||||    
T  8560387 attttgattgcgattttacgagtcccgactttgctatcctatattgattctacaaaaaaccttgagtaaaatccttcgattttgattgcgatttcacgag 8560288  T
Q  101 tc 102  Q
    ||    
T  8560287 tc 8560286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 19348752 - 19348853
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgag 100  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||| || |||||||||| | |||||| |||| ||||||||||||||||||||||    
T  19348752 attttgattgcgattttacgagtcccgaatttgctatcctatatcgattttataaaagtccttcaataaaatccttccattttgattgcgattttacgag 19348851  T
Q  101 tc 102  Q
    ||    
T  19348852 tc 19348853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 21553822 - 21553729
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaata-cttcgattttgattgcgatt 93  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||| | ||||||||||||||||||||    
T  21553822 attttgattgcgattttacgagtcccgactttgctatcctatatcaattctacaaaagtccttgaataaaaaaccttcgattttgattgcgatt 21553729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 20766831 - 20766730
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgag 100  Q
    |||||||||| ||||||| |||||| || |||||||| ||||||||||||| |||||| |||||||||||||  ||||||||||||||||||||||||||    
T  20766831 attttgattgtgattttatgagtcccgattttgctatgctatatcgattctccaaaagcccttgagtaaaatttttcgattttgattgcgattttacgag 20766732  T
Q  101 tc 102  Q
    ||    
T  20766731 tc 20766730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 115
Target Start/End: Original strand, 28746011 - 28746089
Alignment:
Q  37 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcctgactttgctat 115  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| || ||||||||    
T  28746011 tcctatatcgattctacaaaagttcttgagtaaaattcttcgattttgattgcgattttacgagtcccgattttgctat 28746089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 115 - 192
Target Start/End: Original strand, 28746011 - 28746088
Alignment:
Q  115 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgcta 192  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||  |||||||||||    
T  28746011 tcctatatcgattctacaaaagttcttgagtaaaattcttcgattttgattgcgattttacgagtcccgattttgcta 28746088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 117 - 235
Target Start/End: Complemental strand, 24620089 - 24619972
Alignment:
Q  117 ctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaagtaaag 216  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||  | ||||||||| |||||||  ||| | ||||||||    
T  24620089 ctatatcgattctacaaaagtctttgagtaaaatccttcgattttgattgcgattttacaagtcccaattttgctattcccttttgacttg-aagtaaag 24619991  T
Q  217 tcccgattttaataacctt 235  Q
    | |||||||| | ||||||    
T  24619990 ttccgattttgacaacctt 24619972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 76 - 201
Target Start/End: Original strand, 27090645 - 27090763
Alignment:
Q  76 tcgattttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 175  Q
    |||||||||||||||||||||||| |       ||||||||||||||||||| ||||||| |||||||||||||| |||||||||| |||||||| ||||    
T  27090645 tcgattttgattgcgattttacgatt-------ttgctatcctatatcgattatacaaaattccttgagtaaaatccttcgatttttattgcgatcttac 27090737  T
Q  176 gagtttcgattttgctactccctttc 201  Q
    || || | ||||| ||| ||||||||    
T  27090738 gatttgcaatttttctattccctttc 27090763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 39 - 103
Target Start/End: Complemental strand, 24620089 - 24620025
Alignment:
Q  39 ctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcc 103  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||    
T  24620089 ctatatcgattctacaaaagtctttgagtaaaatccttcgattttgattgcgattttacaagtcc 24620025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 115 - 189
Target Start/End: Original strand, 20756257 - 20756331
Alignment:
Q  115 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttg 189  Q
    ||||||||||||||||||||| ||||||||||||||  ||| |||||||||||||||||||||||  ||||||||    
T  20756257 tcctatatcgattctacaaaaatccttgagtaaaatctttcaattttgattgcgattttacgagtcccgattttg 20756331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 20756257 - 20756323
Alignment:
Q  37 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcc 103  Q
    ||||||||||||||||||||| ||||||||||||||  ||| |||||||||||||||||||||||||    
T  20756257 tcctatatcgattctacaaaaatccttgagtaaaatctttcaattttgattgcgattttacgagtcc 20756323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 115 - 226
Target Start/End: Original strand, 39428138 - 39428252
Alignment:
Q  115 tcctatatcgattctacaaaagtccttgagtaaaatacttcg----attttgattgcgattttacgagtttcgattttgctactccctttctactcgaaa 210  Q
    |||||||||||||| |||||| || ||||||||||| |||||    |||||||||||||||||| ||||  ||||||||||| |||||||| || || ||    
T  39428138 tcctatatcgattccacaaaaatctttgagtaaaatccttcgatttattttgattgcgattttatgagtcccgattttgctattccctttcaac-cgcaa 39428236  T
Q  211 gtaaagtcccgatttt 226  Q
    ||||||||||||||||    
T  39428237 gtaaagtcccgatttt 39428252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 27090670 - 27090739
Alignment:
Q  30 tttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    |||||||||||||||||||| ||||||| |||||||||||||| |||||||||| |||||||| ||||||    
T  27090670 tttgctatcctatatcgattatacaaaattccttgagtaaaatccttcgatttttattgcgatcttacga 27090739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 118 - 189
Target Start/End: Original strand, 17064545 - 17064616
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttg 189  Q
    ||||| ||||||||||||||  ||||||||||| |||||||||||||||||||||||||| | |||||||||    
T  17064545 tatattgattctacaaaagtagttgagtaaaatccttcgattttgattgcgattttacgattgtcgattttg 17064616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 118 - 201
Target Start/End: Original strand, 27676674 - 27676757
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttc 201  Q
    |||||||||| |||||||||  |||||||||||  |||||||||||||||||||||| || |||||||||||||  ||||||||    
T  27676674 tatatcgattttacaaaagtagttgagtaaaatctttcgattttgattgcgattttaagattttcgattttgctcttccctttc 27676757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 119 - 238
Target Start/End: Original strand, 29067516 - 29067633
Alignment:
Q  119 atatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaagtaaagtc 218  Q
    ||||| ||||||||||| |||||||||||||| |||||| |||||||| ||||||| ||||| ||||||||||| |||| ||| || |  |||||||||     
T  29067516 atatcaattctacaaaaatccttgagtaaaatccttcga-tttgattgagattttatgagttccgattttgctattcccattcgac-ctgaagtaaagtt 29067613  T
Q  219 ccgattttaataaccttggt 238  Q
    |||||||| | |||||||||    
T  29067614 ccgattttgacaaccttggt 29067633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 118 - 188
Target Start/End: Original strand, 13286182 - 13286252
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgatttt 188  Q
    ||||||||||||||||||||  |||||||||||  || |||||||||||||||||||||||||| ||||||    
T  13286182 tatatcgattctacaaaagtagttgagtaaaatcttttgattttgattgcgattttacgagttttgatttt 13286252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 22355955 - 22355874
Alignment:
Q  120 tatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttc 201  Q
    |||||||| ||||||||||||||| ||||||  || ||||||||||||||||||||||||  ||||||||||| ||| ||||    
T  22355955 tatcgattttacaaaagtccttgaataaaatcttttgattttgattgcgattttacgagtcccgattttgctattccatttc 22355874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 42 - 115
Target Start/End: Complemental strand, 22355955 - 22355882
Alignment:
Q  42 tatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcctgactttgctat 115  Q
    |||||||| ||||||||||||||| ||||||  || |||||||||||||||||||||||||| || ||||||||    
T  22355955 tatcgattttacaaaagtccttgaataaaatcttttgattttgattgcgattttacgagtcccgattttgctat 22355882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 17064545 - 17064604
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    ||||| ||||||||||||||  ||||||||||| ||||||||||||||||||||||||||    
T  17064545 tatattgattctacaaaagtagttgagtaaaatccttcgattttgattgcgattttacga 17064604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 118 - 191
Target Start/End: Complemental strand, 3449201 - 3449128
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgct 191  Q
    ||||||||||||||||||||  |||| ||||||  |||||||||| |||||||||||||| | |||||||||||    
T  3449201 tatatcgattctacaaaagtagttgaataaaatcattcgattttggttgcgattttacgattgtcgattttgct 3449128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 118 - 191
Target Start/End: Complemental strand, 6136460 - 6136387
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgct 191  Q
    ||||||||||||| ||||||  |||||||||||  || |||||||||||||||||||||| ||| |||||||||    
T  6136460 tatatcgattctataaaagtagttgagtaaaatcttttgattttgattgcgattttacgatttttgattttgct 6136387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 40 - 101
Target Start/End: Original strand, 13286182 - 13286243
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagt 101  Q
    ||||||||||||||||||||  |||||||||||  || ||||||||||||||||||||||||    
T  13286182 tatatcgattctacaaaagtagttgagtaaaatcttttgattttgattgcgattttacgagt 13286243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 118 - 188
Target Start/End: Original strand, 28136000 - 28136070
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgatttt 188  Q
    |||||| ||| |||||||||  ||||||||||| ||||||||||||| |||||||||||| | ||||||||    
T  28136000 tatatcaattttacaaaagtagttgagtaaaatccttcgattttgatagcgattttacgattctcgatttt 28136070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 17796805 - 17796862
Alignment:
Q  42 tatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    ||||||||||||||||||  ||||||||||| |||||||||| ||||| |||||||||    
T  17796805 tatcgattctacaaaagtagttgagtaaaatgcttcgattttaattgcaattttacga 17796862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 17796805 - 17796862
Alignment:
Q  120 tatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 177  Q
    ||||||||||||||||||  ||||||||||| |||||||||| ||||| |||||||||    
T  17796805 tatcgattctacaaaagtagttgagtaaaatgcttcgattttaattgcaattttacga 17796862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 19105245 - 19105302
Alignment:
Q  42 tatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    ||||||||||||||||||  ||||||||||| |||||||||| ||||| |||||||||    
T  19105245 tatcgattctacaaaagtagttgagtaaaatgcttcgattttaattgcaattttacga 19105302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 19105245 - 19105302
Alignment:
Q  120 tatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 177  Q
    ||||||||||||||||||  ||||||||||| |||||||||| ||||| |||||||||    
T  19105245 tatcgattctacaaaagtagttgagtaaaatgcttcgattttaattgcaattttacga 19105302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 115
Target Start/End: Original strand, 39428138 - 39428220
Alignment:
Q  37 tcctatatcgattctacaaaagtccttgagtaaaatacttcg----attttgattgcgattttacgagtcctgactttgctat 115  Q
    |||||||||||||| |||||| || ||||||||||| |||||    |||||||||||||||||| |||||| || ||||||||    
T  39428138 tcctatatcgattccacaaaaatctttgagtaaaatccttcgatttattttgattgcgattttatgagtcccgattttgctat 39428220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 27676674 - 27676730
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgatttta 96  Q
    |||||||||| |||||||||  |||||||||||  ||||||||||||||||||||||    
T  27676674 tatatcgattttacaaaagtagttgagtaaaatctttcgattttgattgcgatttta 27676730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 41671426 - 41671490
Alignment:
Q  127 tctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgct 191  Q
    |||||||||||  ||||||||||| ||||||||||| |||||||||||| | | |||||||||||    
T  41671426 tctacaaaagtagttgagtaaaatccttcgattttggttgcgattttacaattatcgattttgct 41671490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 3449201 - 3449142
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    ||||||||||||||||||||  |||| ||||||  |||||||||| ||||||||||||||    
T  3449201 tatatcgattctacaaaagtagttgaataaaatcattcgattttggttgcgattttacga 3449142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 6136460 - 6136401
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    ||||||||||||| ||||||  |||||||||||  || ||||||||||||||||||||||    
T  6136460 tatatcgattctataaaagtagttgagtaaaatcttttgattttgattgcgattttacga 6136401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 28136000 - 28136059
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    |||||| ||| |||||||||  ||||||||||| ||||||||||||| ||||||||||||    
T  28136000 tatatcaattttacaaaagtagttgagtaaaatccttcgattttgatagcgattttacga 28136059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 154 - 201
Target Start/End: Complemental strand, 30727714 - 30727667
Alignment:
Q  154 tcgattttgattgcgattttacgagtttcgattttgctactccctttc 201  Q
    ||||||||||||||||||||| |||| |||||||||||| ||||||||    
T  30727714 tcgattttgattgcgattttaggagtctcgattttgctattccctttc 30727667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 188
Target Start/End: Complemental strand, 10872606 - 10872536
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgatttt 188  Q
    |||||||||||| |||||||  || |||||||| |||| |||||||||||||||||| || ||| ||||||    
T  10872606 tatatcgattcttcaaaagtagtttagtaaaatccttcaattttgattgcgattttatgatttttgatttt 10872536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 188
Target Start/End: Complemental strand, 25870213 - 25870143
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgatttt 188  Q
    |||||||||||||||||  |  ||||||||||| ||| ||||||| |||||||||||||| | ||||||||    
T  25870213 tatatcgattctacaaacttagttgagtaaaatcctttgattttggttgcgattttacgattgtcgatttt 25870143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 115
Target Start/End: Original strand, 29067516 - 29067589
Alignment:
Q  41 atatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcctgactttgctat 115  Q
    ||||| ||||||||||| |||||||||||||| |||||| |||||||| ||||||| |||| | || ||||||||    
T  29067516 atatcaattctacaaaaatccttgagtaaaatccttcga-tttgattgagattttatgagttccgattttgctat 29067589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 13006089 - 13006146
Alignment:
Q  144 gtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttc 201  Q
    |||||||  ||| ||||||||||||||||||||| |||| ||||||||| ||||||||    
T  13006089 gtaaaatcattcaattttgattgcgattttacgattttcaattttgctattccctttc 13006146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 97
Target Start/End: Original strand, 22137515 - 22137572
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 97  Q
    ||||||||||||||||||||  ||||||||||| ||| ||||||| ||| ||||||||    
T  22137515 tatatcgattctacaaaagtagttgagtaaaattctttgattttggttgtgattttac 22137572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 22137515 - 22137572
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 175  Q
    ||||||||||||||||||||  ||||||||||| ||| ||||||| ||| ||||||||    
T  22137515 tatatcgattctacaaaagtagttgagtaaaattctttgattttggttgtgattttac 22137572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 10872606 - 10872550
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgatttta 96  Q
    |||||||||||| |||||||  || |||||||| |||| ||||||||||||||||||    
T  10872606 tatatcgattcttcaaaagtagtttagtaaaatccttcaattttgattgcgatttta 10872550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 188
Target Start/End: Original strand, 27055321 - 27055401
Alignment:
Q  108 tttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgatttt 188  Q
    ||||||||||| ||||||||||||||| ||  || |||||||   ||| ||||| ||||||||||||||| || |||||||    
T  27055321 tttgctatcctgtatcgattctacaaatgttttttagtaaaacctttcaattttaattgcgattttacgatttgcgatttt 27055401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 41671426 - 41671474
Alignment:
Q  49 tctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 97  Q
    |||||||||||  ||||||||||| ||||||||||| ||||||||||||    
T  41671426 tctacaaaagtagttgagtaaaatccttcgattttggttgcgattttac 41671474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 25870213 - 25870154
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    |||||||||||||||||  |  ||||||||||| ||| ||||||| ||||||||||||||    
T  25870213 tatatcgattctacaaacttagttgagtaaaatcctttgattttggttgcgattttacga 25870154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 236
Target Start/End: Original strand, 9169869 - 9169950
Alignment:
Q  154 tcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaagtaaagtcccgattttaataaccttg 236  Q
    |||||||||||||| |||||||| ||  | ||||||||||| |||||| ||| | ||||||||| |||||||| |||| ||||    
T  9169869 tcgattttgattgcaattttacgggtcccaattttgctacttcctttcgacttg-aagtaaagttccgattttgataatcttg 9169950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 188
Target Start/End: Original strand, 42697086 - 42697156
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgatttt 188  Q
    ||||||||||||||||||||  |||| |||||| |||| |||||  |||||||||||| | | ||||||||    
T  42697086 tatatcgattctacaaaagtagttgaataaaatccttcaattttagttgcgattttacaattgtcgatttt 42697156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 191
Target Start/End: Original strand, 21963669 - 21963742
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgct 191  Q
    ||||||||||||| ||||||  ||||||||||| |||  |||||| ||| |||||||| | | |||||||||||    
T  21963669 tatatcgattctataaaagtaattgagtaaaattctttaattttggttgtgattttactattgtcgattttgct 21963742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 191
Target Start/End: Original strand, 21986105 - 21986178
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgct 191  Q
    ||||||||||||| ||||||  ||||||||||| |||  |||||| ||| |||||||| | | |||||||||||    
T  21986105 tatatcgattctataaaagtaattgagtaaaattctttaattttggttgtgattttactattgtcgattttgct 21986178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 27055321 - 27055390
Alignment:
Q  30 tttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    ||||||||||| ||||||||||||||| ||  || |||||||   ||| ||||| |||||||||||||||    
T  27055321 tttgctatcctgtatcgattctacaaatgttttttagtaaaacctttcaattttaattgcgattttacga 27055390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 97
Target Start/End: Original strand, 42697086 - 42697143
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 97  Q
    ||||||||||||||||||||  |||| |||||| |||| |||||  ||||||||||||    
T  42697086 tatatcgattctacaaaagtagttgaataaaatccttcaattttagttgcgattttac 42697143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 22355918 - 22355882
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctat 37  Q
    ||||||||||||||||||||||||| || ||||||||    
T  22355918 attttgattgcgattttacgagtcccgattttgctat 22355882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 28746053 - 28746089
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctat 37  Q
    ||||||||||||||||||||||||| || ||||||||    
T  28746053 attttgattgcgattttacgagtcccgattttgctat 28746089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 109; Significance: 9e-55; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 76 - 236
Target Start/End: Original strand, 55476184 - 55476343
Alignment:
Q  76 tcgattttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 175  Q
    |||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  55476184 tcgattttgattgcgattttacgagttccgactttgctatcttatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttac 55476283  T
Q  176 gagtttcgattttgctactccctttctactcgaaagtaaagtcccgattttaataaccttg 236  Q
    ||||  |||||||  ||||||||||| ||| | |||||||||||||||||| |||||||||    
T  55476284 gagtaccgattttattactccctttcgacttg-aagtaaagtcccgattttgataaccttg 55476343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 55476187 - 55476287
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgag 100  Q
    ||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  55476187 attttgattgcgattttacgagttccgactttgctatcttatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgag 55476286  T
Q  101 t 101  Q
    |    
T  55476287 t 55476287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 117 - 236
Target Start/End: Original strand, 9770349 - 9770467
Alignment:
Q  117 ctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaagtaaag 216  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||  ||||||||||| |||||||| || | |||||||||    
T  9770349 ctatatcgattctacaaaagaccttgagtaaaatccttcgattttgattgcgattttacgagtcccgattttgctattccctttcgac-ctaaagtaaag 9770447  T
Q  217 tcccgattttaataaccttg 236  Q
    |||||||||| | |||||||    
T  9770448 tcccgattttgacaaccttg 9770467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 115 - 226
Target Start/End: Complemental strand, 23064855 - 23064745
Alignment:
Q  115 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaagtaa 214  Q
    ||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||| |||||| | || |||||||| || |  ||||||    
T  23064855 tcctatatcgattctacaaaagtccttgaataaaatccttcaattttgattgcgattttacgagttccgatttcgttattccctttcgac-ctgaagtaa 23064757  T
Q  215 agtcccgatttt 226  Q
    ||||||||||||    
T  23064756 agtcccgatttt 23064745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 39 - 115
Target Start/End: Original strand, 9770349 - 9770425
Alignment:
Q  39 ctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcctgactttgctat 115  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| || ||||||||    
T  9770349 ctatatcgattctacaaaagaccttgagtaaaatccttcgattttgattgcgattttacgagtcccgattttgctat 9770425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 76 - 189
Target Start/End: Original strand, 8367398 - 8367511
Alignment:
Q  76 tcgattttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 175  Q
    |||||||| ||||| ||||||| | |  ||| |||||||||||||||||||  ||| |||||||||||||||||| |||||||||||||||| |||||||    
T  8367398 tcgattttaattgcaattttacaatttatgattttgctatcctatatcgatattaccaaagtccttgagtaaaatccttcgattttgattgcaattttac 8367497  T
Q  176 gagtttcgattttg 189  Q
    ||||  ||||||||    
T  8367498 gagtcccgattttg 8367511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 115 - 235
Target Start/End: Original strand, 36121058 - 36121177
Alignment:
Q  115 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaagtaa 214  Q
    |||||||||||| |||||||||||||||||||||||  ||||||||||||| |||||||||||||  |||||  |||| |||||||| ||| | ||||||    
T  36121058 tcctatatcgatactacaaaagtccttgagtaaaatctttcgattttgattccgattttacgagtcccgattaagctattccctttcaacttg-aagtaa 36121156  T
Q  215 agtcccgattttaataacctt 235  Q
    || ||||||||| | ||||||    
T  36121157 agacccgattttgacaacctt 36121177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 5375900 - 5375966
Alignment:
Q  37 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcc 103  Q
    |||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  5375900 tcctatatagattctacagaagtccttgagtaaaatccttcgattttgattgcgattttacgagtcc 5375966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 8367401 - 8367503
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgag 100  Q
    ||||| ||||| ||||||| | |  ||| |||||||||||||||||||  ||| |||||||||||||||||| |||||||||||||||| ||||||||||    
T  8367401 attttaattgcaattttacaatttatgattttgctatcctatatcgatattaccaaagtccttgagtaaaatccttcgattttgattgcaattttacgag 8367500  T
Q  101 tcc 103  Q
    |||    
T  8367501 tcc 8367503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 115 - 188
Target Start/End: Original strand, 5375900 - 5375973
Alignment:
Q  115 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgatttt 188  Q
    |||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||  |||||||    
T  5375900 tcctatatagattctacagaagtccttgagtaaaatccttcgattttgattgcgattttacgagtcccgatttt 5375973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 23064855 - 23064791
Alignment:
Q  37 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagt 101  Q
    ||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||    
T  23064855 tcctatatcgattctacaaaagtccttgaataaaatccttcaattttgattgcgattttacgagt 23064791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 36121058 - 36121124
Alignment:
Q  37 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcc 103  Q
    |||||||||||| |||||||||||||||||||||||  ||||||||||||| |||||||||||||||    
T  36121058 tcctatatcgatactacaaaagtccttgagtaaaatctttcgattttgattccgattttacgagtcc 36121124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 199
Target Start/End: Complemental strand, 8011027 - 8010946
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctt 199  Q
    ||||||||||||| |||| |  ||||||||||| ||||||||||||||||||||||||||||  ||||||||||| ||||||    
T  8011027 tatatcgattctataaaaatagttgagtaaaatccttcgattttgattgcgattttacgagtcccgattttgctattccctt 8010946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 115 - 228
Target Start/End: Original strand, 13023793 - 13023905
Alignment:
Q  115 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaagtaa 214  Q
    ||||||||||||| ||||||| |||||| |||||||  ||| || ||||||| ||||||||||||| ||||||||||| || ||||| ||| | ||||||    
T  13023793 tcctatatcgattttacaaaattccttgggtaaaatcattctatcttgattgtgattttacgagttccgattttgctattctctttcgacttg-aagtaa 13023891  T
Q  215 agtcccgattttaa 228  Q
    |||||| |||||||    
T  13023892 agtcccaattttaa 13023905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 187
Target Start/End: Original strand, 37240477 - 37240546
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattt 187  Q
    ||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||| | |||||||    
T  37240477 tatatcgattctacaaaagtagttgagtaaaatccttcgattttgattgcgattttacgattgtcgattt 37240546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 125 - 201
Target Start/End: Complemental strand, 6346839 - 6346763
Alignment:
Q  125 attctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttc 201  Q
    |||||||||||||  ||||||||||| ||||||||||||||| |||||||||| |||||||||||||  ||||||||    
T  6346839 attctacaaaagtagttgagtaaaatccttcgattttgattgtgattttacgattttcgattttgctcttccctttc 6346763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 115 - 191
Target Start/End: Original strand, 10394845 - 10394921
Alignment:
Q  115 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgct 191  Q
    ||||||| |||||||||||||||  ||||||||| | |||||||||||||||||||||||||| ||| |||||||||    
T  10394845 tcctataccgattctacaaaagtagttgagtaaagtccttcgattttgattgcgattttacgatttttgattttgct 10394921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 121 - 201
Target Start/End: Complemental strand, 13551560 - 13551480
Alignment:
Q  121 atcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttc 201  Q
    |||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||| | |||||||||| ||| ||||    
T  13551560 atcgattctataaaagtcctcgagtaaaatccttcgattttaattgcgattttacgagtcttgattttgctattccttttc 13551480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 43 - 115
Target Start/End: Complemental strand, 13551560 - 13551488
Alignment:
Q  43 atcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcctgactttgctat 115  Q
    |||||||||| ||||||||| ||||||||| |||||||||| |||||||||||||||||| ||| ||||||||    
T  13551560 atcgattctataaaagtcctcgagtaaaatccttcgattttaattgcgattttacgagtcttgattttgctat 13551488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 115
Target Start/End: Complemental strand, 8011027 - 8010952
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcctgactttgctat 115  Q
    ||||||||||||| |||| |  ||||||||||| |||||||||||||||||||||||||||||| || ||||||||    
T  8011027 tatatcgattctataaaaatagttgagtaaaatccttcgattttgattgcgattttacgagtcccgattttgctat 8010952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 118 - 201
Target Start/End: Complemental strand, 9911302 - 9911219
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttc 201  Q
    |||||||||||||||||||| || ||||||||| ||||| |||| |||||||||||||||||  ||||||| ||| ||||||||    
T  9911302 tatatcgattctacaaaagttctcgagtaaaatccttcgttttttattgcgattttacgagtcccgattttactattccctttc 9911219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 37240477 - 37240536
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    ||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||    
T  37240477 tatatcgattctacaaaagtagttgagtaaaatccttcgattttgattgcgattttacga 37240536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 40 - 103
Target Start/End: Complemental strand, 9911302 - 9911239
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcc 103  Q
    |||||||||||||||||||| || ||||||||| ||||| |||| |||||||||||||||||||    
T  9911302 tatatcgattctacaaaagttctcgagtaaaatccttcgttttttattgcgattttacgagtcc 9911239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 10394845 - 10394907
Alignment:
Q  37 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    ||||||| |||||||||||||||  ||||||||| | ||||||||||||||||||||||||||    
T  10394845 tcctataccgattctacaaaagtagttgagtaaagtccttcgattttgattgcgattttacga 10394907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 236
Target Start/End: Original strand, 4157269 - 4157385
Alignment:
Q  122 tcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac---gagtttcgattttgctactccctttctactcgaaagtaaagtc 218  Q
    ||||||||||||||||  |||||||||||  |||||| ||||||||||||||||   || |||||||||||||  |||||||| |||  |||| ||| ||    
T  4157269 tcgattctacaaaagtagttgagtaaaatctttcgatcttgattgcgattttacaatgattttcgattttgctcttccctttcgact-taaagcaaaatc 4157367  T
Q  219 ccgattttaataaccttg 236  Q
    |||||||| |||| ||||    
T  4157368 ccgattttgataaacttg 4157385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 236
Target Start/End: Original strand, 4157556 - 4157672
Alignment:
Q  122 tcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac---gagtttcgattttgctactccctttctactcgaaagtaaagtc 218  Q
    ||||||||||||||||  |||||||||||  |||||| ||||||||||||||||   || |||||||||||||  |||||||| |||  |||| ||| ||    
T  4157556 tcgattctacaaaagtagttgagtaaaatctttcgatcttgattgcgattttacaatgattttcgattttgctcttccctttcgact-taaagcaaaatc 4157654  T
Q  219 ccgattttaataaccttg 236  Q
    |||||||| |||| ||||    
T  4157655 ccgattttgataaacttg 4157672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 10143138 - 10143197
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    |||||||||||||||||| |  |||| |||||| ||||||||||||||||||||||||||    
T  10143138 tatatcgattctacaaaattagttgaataaaatccttcgattttgattgcgattttacga 10143197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 10143138 - 10143197
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 177  Q
    |||||||||||||||||| |  |||| |||||| ||||||||||||||||||||||||||    
T  10143138 tatatcgattctacaaaattagttgaataaaatccttcgattttgattgcgattttacga 10143197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 5943145 - 5943067
Alignment:
Q  123 cgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttc 201  Q
    |||||||||||||||  ||||||||||| |||| |||||  |||||||||||||| ||| |||||||||  ||||||||    
T  5943145 cgattctacaaaagtagttgagtaaaatccttcaattttacttgcgattttacgatttttgattttgctcttccctttc 5943067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 191
Target Start/End: Complemental strand, 5361856 - 5361783
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgct 191  Q
    ||||||||||||||||||||  ||||||||||  ||||||||||| |||| ||||||||| | || ||||||||    
T  5361856 tatatcgattctacaaaagtagttgagtaaaacccttcgattttgtttgcaattttacgattgtctattttgct 5361783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 7045204 - 7045265
Alignment:
Q  140 ttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttc 201  Q
    ||||||||||| ||||||||||||||||||||||| || ||| |||||||||  ||||||||    
T  7045204 ttgagtaaaatccttcgattttgattgcgattttatgatttttgattttgctcttccctttc 7045265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 6346839 - 6346787
Alignment:
Q  47 attctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    |||||||||||||  ||||||||||| ||||||||||||||| ||||||||||    
T  6346839 attctacaaaagtagttgagtaaaatccttcgattttgattgtgattttacga 6346787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 118 - 182
Target Start/End: Original strand, 7452744 - 7452807
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttc 182  Q
    ||||| ||||||||||||||  ||||||||| | |||||||||||||||||||||||||| ||||    
T  7452744 tatattgattctacaaaagtagttgagtaaa-tccttcgattttgattgcgattttacgattttc 7452807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 5361856 - 5361797
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    ||||||||||||||||||||  ||||||||||  ||||||||||| |||| |||||||||    
T  5361856 tatatcgattctacaaaagtagttgagtaaaacccttcgattttgtttgcaattttacga 5361797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 7452744 - 7452802
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    ||||| ||||||||||||||  ||||||||| | ||||||||||||||||||||||||||    
T  7452744 tatattgattctacaaaagtagttgagtaaa-tccttcgattttgattgcgattttacga 7452802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 8409790 - 8409867
Alignment:
Q  154 tcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaagtaaagtcccgattttaataac 232  Q
    |||||||||||| ||||||||  | | || |||||||||||||||||| ||| | |||||||||||||||||| |||||    
T  8409790 tcgattttgattacgattttataaatctcaattttgctactccctttcaacttg-aagtaaagtcccgattttgataac 8409867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 115
Target Start/End: Original strand, 13023793 - 13023871
Alignment:
Q  37 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcctgactttgctat 115  Q
    ||||||||||||| ||||||| |||||| |||||||  ||| || ||||||| |||||||||||| | || ||||||||    
T  13023793 tcctatatcgattttacaaaattccttgggtaaaatcattctatcttgattgtgattttacgagttccgattttgctat 13023871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 4157269 - 4157322
Alignment:
Q  44 tcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 97  Q
    ||||||||||||||||  |||||||||||  |||||| ||||||||||||||||    
T  4157269 tcgattctacaaaagtagttgagtaaaatctttcgatcttgattgcgattttac 4157322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 4157556 - 4157609
Alignment:
Q  44 tcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 97  Q
    ||||||||||||||||  |||||||||||  |||||| ||||||||||||||||    
T  4157556 tcgattctacaaaagtagttgagtaaaatctttcgatcttgattgcgattttac 4157609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 118 - 191
Target Start/End: Complemental strand, 18459522 - 18459449
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgct 191  Q
    |||||| ||||||||||| |  || ||| |||| |||||||||| ||||||||||||||| | |||||||||||    
T  18459522 tatatcaattctacaaaattagttaagtcaaatccttcgattttaattgcgattttacgattgtcgattttgct 18459449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 7045001 - 7045057
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgatttta 96  Q
    |||||||||| | |||||||  |||||||||||  ||||||||||||||||||||||    
T  7045001 tatatcgattattcaaaagtagttgagtaaaatcattcgattttgattgcgatttta 7045057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 174
Target Start/End: Original strand, 7045001 - 7045057
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgatttta 174  Q
    |||||||||| | |||||||  |||||||||||  ||||||||||||||||||||||    
T  7045001 tatatcgattattcaaaagtagttgagtaaaatcattcgattttgattgcgatttta 7045057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 8743658 - 8743582
Alignment:
Q  116 cctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgcta 192  Q
    |||||||||||| |||||| ||  |||||||||||  ||||||||||||| |||| |||| | ||| ||||||||||    
T  8743658 cctatatcgattatacaaatgtagttgagtaaaatctttcgattttgattacgatgttactatttttgattttgcta 8743582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 95
Target Start/End: Original strand, 24719813 - 24719868
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgatttt 95  Q
    ||||||||||||||||||||  | ||||||||| |||||||| ||||| |||||||    
T  24719813 tatatcgattctacaaaagtaatcgagtaaaatccttcgattgtgatttcgatttt 24719868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 24719813 - 24719868
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgatttt 173  Q
    ||||||||||||||||||||  | ||||||||| |||||||| ||||| |||||||    
T  24719813 tatatcgattctacaaaagtaatcgagtaaaatccttcgattgtgatttcgatttt 24719868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 99
Target Start/End: Complemental strand, 5943145 - 5943091
Alignment:
Q  45 cgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    |||||||||||||||  ||||||||||| |||| |||||  ||||||||||||||    
T  5943145 cgattctacaaaagtagttgagtaaaatccttcaattttacttgcgattttacga 5943091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 96
Target Start/End: Original strand, 7045204 - 7045238
Alignment:
Q  62 ttgagtaaaatacttcgattttgattgcgatttta 96  Q
    ||||||||||| |||||||||||||||||||||||    
T  7045204 ttgagtaaaatccttcgattttgattgcgatttta 7045238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 8889462 - 8889512
Alignment:
Q  47 attctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 97  Q
    |||||||||||||  |||||||| || ||||||||||| ||||||||||||    
T  8889462 attctacaaaagtagttgagtaagatccttcgattttggttgcgattttac 8889512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 175
Target Start/End: Original strand, 8889462 - 8889512
Alignment:
Q  125 attctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 175  Q
    |||||||||||||  |||||||| || ||||||||||| ||||||||||||    
T  8889462 attctacaaaagtagttgagtaagatccttcgattttggttgcgattttac 8889512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 175
Target Start/End: Complemental strand, 9149613 - 9149556
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 175  Q
    |||||||||||||| |||||  ||||||||||| |||| ||||||||||  |||||||    
T  9149613 tatatcgattctacgaaagtagttgagtaaaatccttcaattttgattggaattttac 9149556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 97
Target Start/End: Complemental strand, 9149613 - 9149556
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 97  Q
    |||||||||||||| |||||  ||||||||||| |||| ||||||||||  |||||||    
T  9149613 tatatcgattctacgaaagtagttgagtaaaatccttcaattttgattggaattttac 9149556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 191
Target Start/End: Original strand, 17466317 - 17466390
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgct 191  Q
    ||||||||||| ||||||||  ||||||| |||  ||| |||||| |||| ||||||||| | |||||||||||    
T  17466317 tatatcgattccacaaaagtagttgagtataatctttcaattttgtttgcaattttacgattgtcgattttgct 17466390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 160
Target Start/End: Complemental strand, 5884177 - 5884129
Alignment:
Q  112 ctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattt 160  Q
    ||||||||||| |||||||||||| |  ||||||||||| |||||||||    
T  5884177 ctatcctatattgattctacaaaaatagttgagtaaaatccttcgattt 5884129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 5884177 - 5884129
Alignment:
Q  34 ctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattt 82  Q
    ||||||||||| |||||||||||| |  ||||||||||| |||||||||    
T  5884177 ctatcctatattgattctacaaaaatagttgagtaaaatccttcgattt 5884129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 8010988 - 8010952
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctat 37  Q
    ||||||||||||||||||||||||| || ||||||||    
T  8010988 attttgattgcgattttacgagtcccgattttgctat 8010952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 9770389 - 9770425
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctat 37  Q
    ||||||||||||||||||||||||| || ||||||||    
T  9770389 attttgattgcgattttacgagtcccgattttgctat 9770425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 192
Target Start/End: Complemental strand, 46664227 - 46664191
Alignment:
Q  156 gattttgattgcgattttacgagtttcgattttgcta 192  Q
    |||||||||||||||||| ||| ||||||||||||||    
T  46664227 gattttgattgcgattttccgattttcgattttgcta 46664191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 106; Significance: 5e-53; HSPs: 2)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 76 - 237
Target Start/End: Complemental strand, 14859 - 14699
Alignment:
Q  76 tcgattttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 175  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  14859 tcgattttgattgcgattttacgagtcccgactttgctatcctacatcgattctacaaaagtctttgaataaaatccttcgattttgattgcgattttac 14760  T
Q  176 gagtttcgattttgctactccctttctactcgaaagtaaagtcccgattttaataaccttgg 237  Q
    ||||  ||||||||||||||| |||| ||| | |||||||| ||||||||| ||||||||||    
T  14759 gagtcccgattttgctactccatttcgacttg-aagtaaagccccgattttgataaccttgg 14699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 14856 - 14743
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgag 100  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||| |||||| |||||||||||||||||||||||||||    
T  14856 attttgattgcgattttacgagtcccgactttgctatcctacatcgattctacaaaagtctttgaataaaatccttcgattttgattgcgattttacgag 14757  T
Q  101 tcctgactttgcta 114  Q
    ||| || |||||||    
T  14756 tcccgattttgcta 14743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 103; Significance: 3e-51; HSPs: 70)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 76 - 238
Target Start/End: Complemental strand, 25842664 - 25842503
Alignment:
Q  76 tcgattttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 175  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| | |||||||||| || | |||||||||||||||||||    
T  25842664 tcgattttgattgcgattttacgagtcccgactttgctatcctacatcgattctacaaaagttcatgagtaaaatcctccaattttgattgcgattttac 25842565  T
Q  176 gagtttcgattttgctactccctttctactcgaaagtaaagtcccgattttaataaccttggt 238  Q
    ||||  |||||||||||||||||||| ||| | |||||||||||| ||||| |||||||||||    
T  25842564 gagtcccgattttgctactccctttcgacttg-aagtaaagtcccaattttgataaccttggt 25842503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 76 - 235
Target Start/End: Complemental strand, 23618362 - 23618204
Alignment:
Q  76 tcgattttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 175  Q
    |||||||||||| ||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||      
T  23618362 tcgattttgattacgattttacgagtcccgactttgctatccttcatcgattctacaaaagtccttgagtaaaattcttcgattttgattgcgattttcg 23618263  T
Q  176 gagtttcgattttgctactccctttctactcgaaagtaaagtcccgattttaataacctt 235  Q
    ||||  |||||||||||||||||||| |||  |||||||||||  |||||| ||||||||    
T  23618262 gagtcccgattttgctactccctttcaact-taaagtaaagtcttgattttgataacctt 23618204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 76 - 237
Target Start/End: Complemental strand, 1981256 - 1981098
Alignment:
Q  76 tcgattttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 175  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||  ||| |||||||||||||| |||||||||    
T  1981256 tcgattttgattgcaattttacgagtcccgactttgctatcctatatcgattctactaaagaccttgagt--aatccttcgattttgattacgattttac 1981159  T
Q  176 gagtttcgattttgctactccctttctactcgaaagtaaagtcccgattttaataaccttgg 237  Q
    ||||| | ||||| ||| |||||||| ||| | |||||||||||||||||| ||||||||||    
T  1981158 gagttccaatttttctaatccctttcgacttg-aagtaaagtcccgattttgataaccttgg 1981098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 76 - 226
Target Start/End: Original strand, 8304282 - 8304431
Alignment:
Q  76 tcgattttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 175  Q
    |||||||||||||| |||||| |||| |  | |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  8304282 tcgattttgattgcaattttatgagttccaattttgctatcctatatcaattctacaaaagtccttgagtaaaatccttcgattttgattgtgattttac 8304381  T
Q  176 gagtttcgattttgctactccctttctactcgaaagtaaagtcccgatttt 226  Q
    ||||  |||||||||||||| ||||| ||| | |||||||||| |||||||    
T  8304382 gagtcgcgattttgctactctctttcgacttg-aagtaaagtctcgatttt 8304431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 23618359 - 23618246
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgag 100  Q
    ||||||||| ||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||    
T  23618359 attttgattacgattttacgagtcccgactttgctatccttcatcgattctacaaaagtccttgagtaaaattcttcgattttgattgcgattttcggag 23618260  T
Q  101 tcctgactttgcta 114  Q
    ||| || |||||||    
T  23618259 tcccgattttgcta 23618246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 25842661 - 25842548
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgag 100  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| | |||||||||| || | ||||||||||||||||||||||    
T  25842661 attttgattgcgattttacgagtcccgactttgctatcctacatcgattctacaaaagttcatgagtaaaatcctccaattttgattgcgattttacgag 25842562  T
Q  101 tcctgactttgcta 114  Q
    ||| || |||||||    
T  25842561 tcccgattttgcta 25842548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 1981253 - 1981155
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgag 100  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||  ||| |||||||||||||| ||||||||||||    
T  1981253 attttgattgcaattttacgagtcccgactttgctatcctatatcgattctactaaagaccttgagt--aatccttcgattttgattacgattttacgag 1981156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 8304285 - 8304386
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgag 100  Q
    ||||||||||| |||||| |||| |  | |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  8304285 attttgattgcaattttatgagttccaattttgctatcctatatcaattctacaaaagtccttgagtaaaatccttcgattttgattgtgattttacgag 8304384  T
Q  101 tc 102  Q
    ||    
T  8304385 tc 8304386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 115 - 235
Target Start/End: Complemental strand, 24989667 - 24989549
Alignment:
Q  115 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaagtaa 214  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||  |||||||| || |||||||| || | |||||||    
T  24989667 tcctatatcgattctacaaaagtcctt-agtaaaatccttcgattttgattgccattttacgagtcccgattttgttattccctttcgac-ctaaagtaa 24989570  T
Q  215 agtcccgattttaataacctt 235  Q
    |||||||||||| | ||||||    
T  24989569 agtcccgattttgacaacctt 24989549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 117 - 235
Target Start/End: Original strand, 17811585 - 17811702
Alignment:
Q  117 ctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaagtaaag 216  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| |  ||||||||||| |||||||  || |  ||||||||    
T  17811585 ctatatcgattctacaaaagtccttgagtaaaatctttcgattttgattgcgattttacgaatcccgattttgctattcccttttgac-ctgaagtaaag 17811683  T
Q  217 tcccgattttaataacctt 235  Q
    |||||||||| | ||||||    
T  17811684 tcccgattttgacaacctt 17811702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 115 - 235
Target Start/End: Original strand, 5715520 - 5715635
Alignment:
Q  115 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaagtaa 214  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||  ||||||| ||| | ||||     |||| |||||    
T  5715520 tcctatatcgattctacaaaagtccttgagtaaaatccctcgattttgattgcgattttacgagtcccgatttttctatttcctt-----tcgacagtaa 5715614  T
Q  215 agtcccgattttaataacctt 235  Q
    |||||||||||| | ||||||    
T  5715615 agtcccgattttgacaacctt 5715635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 5715520 - 5715586
Alignment:
Q  37 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcc 103  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  5715520 tcctatatcgattctacaaaagtccttgagtaaaatccctcgattttgattgcgattttacgagtcc 5715586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 76 - 201
Target Start/End: Original strand, 4574926 - 4575051
Alignment:
Q  76 tcgattttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 175  Q
    |||||||||| ||||||||||||| |    | ||| ||||||||||||||||||||||||||  ||||||| ||| ||| ||||||||||||||||||||    
T  4574926 tcgattttgactgcgattttacgattttcaattttactatcctatatcgattctacaaaagtagttgagtagaattctttgattttgattgcgattttac 4575025  T
Q  176 gagtttcgattttgctactccctttc 201  Q
    || ||| |||||| ||| ||||||||    
T  4575026 gatttttgattttactattccctttc 4575051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 39 - 115
Target Start/End: Original strand, 17811585 - 17811661
Alignment:
Q  39 ctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcctgactttgctat 115  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||| || ||||||||    
T  17811585 ctatatcgattctacaaaagtccttgagtaaaatctttcgattttgattgcgattttacgaatcccgattttgctat 17811661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 7307204 - 7307321
Alignment:
Q  74 cttcgattttgattgcgattttacgagtcctgactttgctatcctatatcgattctac-aaaagtccttgagtaaaatacttcgattttg-attgcgatt 171  Q
    |||||||||||||||||||||||||| |   || |||||||||||||||||||||||| |||||||||||| ||||||| ||| ||||||  ||||||||    
T  7307204 cttcgattttgattgcgattttacgatttgcgattttgctatcctatatcgattctacaaaaagtccttgaataaaataattcaattttgctttgcgatt 7307303  T
Q  172 ttacgagtttcgattttg 189  Q
    |||| | || ||||||||    
T  7307304 ttacaatttgcgattttg 7307321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 80 - 232
Target Start/End: Complemental strand, 8629657 - 8629506
Alignment:
Q  80 ttttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagt 179  Q
    |||||||||||||||||||| |  ||| ||| ||||||| |||||||||||||||| |||||||||||||  ||  |||| |||||||| ||||| ||||    
T  8629657 ttttgattgcgattttacgatttatgattttactatcctgtatcgattctacaaaattccttgagtaaaactctctgattgtgattgcgtttttatgagt 8629558  T
Q  180 ttcgattttgctactccctttctactcgaaagtaaagtcccgattttaataac 232  Q
      | ||||| ||| |||||||| || | ||||| ||||||||||||| |||||    
T  8629557 cccaattttactattccctttcaac-ctaaagtgaagtcccgatttttataac 8629506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 118 - 226
Target Start/End: Complemental strand, 20570776 - 20570669
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaagtaaagt 217  Q
    |||||||||||||||||||||||||||||||||  ||| |||||||||||||||||| |||| || |||||| || |||||||| || |  ||||| |||    
T  20570776 tatatcgattctacaaaagtccttgagtaaaatctttcaattttgattgcgattttatgagtctcaattttgttattccctttcaac-ctgaagtagagt 20570678  T
Q  218 cccgatttt 226  Q
    |||||||||    
T  20570677 cccgatttt 20570669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 115 - 174
Target Start/End: Complemental strand, 24725366 - 24725307
Alignment:
Q  115 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgatttta 174  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  24725366 tcctatatcgattctacaaaagtccttgagtaaaatcctttgattttgattgcgatttta 24725307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 24725366 - 24725307
Alignment:
Q  37 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgatttta 96  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  24725366 tcctatatcgattctacaaaagtccttgagtaaaatcctttgattttgattgcgatttta 24725307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 115 - 226
Target Start/End: Original strand, 27221649 - 27221760
Alignment:
Q  115 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaagtaa 214  Q
    ||||| ||||||||||||||||||   ||||||||| |||||||||||||||||||||||||| |  |||||||||||  | ||||| ||   |||||||    
T  27221649 tcctacatcgattctacaaaagtctccgagtaaaatccttcgattttgattgcgattttacgaatcccgattttgctatactctttcgacctaaaagtaa 27221748  T
Q  215 agtcccgatttt 226  Q
    ||||||||||||    
T  27221749 agtcccgatttt 27221760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 24989667 - 24989602
Alignment:
Q  37 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcc 103  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||    
T  24989667 tcctatatcgattctacaaaagtcctt-agtaaaatccttcgattttgattgccattttacgagtcc 24989602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 235
Target Start/End: Original strand, 5058767 - 5058882
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaagtaaagt 217  Q
    ||||||||||| |||||| ||||||| |||||| |||||||||||||||| ||||||||| || ||||||||||| ||||||| |  ||  |||||||||    
T  5058767 tatatcgattc-acaaaattccttgattaaaatccttcgattttgattgcaattttacgaattccgattttgctattcccttt-tgatctgaagtaaagt 5058864  T
Q  218 cccgattttaataacctt 235  Q
    ||||||||| | ||||||    
T  5058865 cccgattttgacaacctt 5058882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 235
Target Start/End: Complemental strand, 44944736 - 44944620
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaagtaaagt 217  Q
    |||||||||||||||||||||||| ||||||||  ||||||||| |||||||||||||||||  ||  ||||||| | |||||| | ||  |||||||||    
T  44944736 tatatcgattctacaaaagtccttaagtaaaattgttcgattttaattgcgattttacgagtcccgcatttgctatttcctttcga-tctgaagtaaagt 44944638  T
Q  218 cccgattttaataacctt 235  Q
    ||||||||| | ||||||    
T  44944637 cccgattttgacaacctt 44944620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 121 - 201
Target Start/End: Complemental strand, 9685182 - 9685102
Alignment:
Q  121 atcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttc 201  Q
    |||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||| | |||||||||| ||| ||||    
T  9685182 atcgattctataaaagtcctcgagtaaaatccttcgattttaattgcgattttacgagtcttgattttgctattccttttc 9685102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 43 - 115
Target Start/End: Complemental strand, 9685182 - 9685110
Alignment:
Q  43 atcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcctgactttgctat 115  Q
    |||||||||| ||||||||| ||||||||| |||||||||| |||||||||||||||||| ||| ||||||||    
T  9685182 atcgattctataaaagtcctcgagtaaaatccttcgattttaattgcgattttacgagtcttgattttgctat 9685110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 103
Target Start/End: Complemental strand, 44944736 - 44944673
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcc 103  Q
    |||||||||||||||||||||||| ||||||||  ||||||||| |||||||||||||||||||    
T  44944736 tatatcgattctacaaaagtccttaagtaaaattgttcgattttaattgcgattttacgagtcc 44944673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 4574929 - 4575027
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    ||||||| ||||||||||||| |    | ||| ||||||||||||||||||||||||||  ||||||| ||| ||| ||||||||||||||||||||||    
T  4574929 attttgactgcgattttacgattttcaattttactatcctatatcgattctacaaaagtagttgagtagaattctttgattttgattgcgattttacga 4575027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 7307209 - 7307307
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctatcctatatcgattctac-aaaagtccttgagtaaaatacttcgattttg-attgcgattttac 97  Q
    ||||||||||||||||||||| |   || |||||||||||||||||||||||| |||||||||||| ||||||| ||| ||||||  ||||||||||||    
T  7307209 attttgattgcgattttacgatttgcgattttgctatcctatatcgattctacaaaaagtccttgaataaaataattcaattttgctttgcgattttac 7307307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 115 - 201
Target Start/End: Original strand, 11326518 - 11326604
Alignment:
Q  115 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttc 201  Q
    |||||||| ||||| |||||||||||||||||||||||||| |||||||||| ||||||| ||||  | ||||||||| || |||||    
T  11326518 tcctatattgattccacaaaagtccttgagtaaaatacttcaattttgattgtgattttaagagtcccaattttgctattctctttc 11326604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 11326518 - 11326584
Alignment:
Q  37 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcc 103  Q
    |||||||| ||||| |||||||||||||||||||||||||| |||||||||| ||||||| ||||||    
T  11326518 tcctatattgattccacaaaagtccttgagtaaaatacttcaattttgattgtgattttaagagtcc 11326584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 40 - 102
Target Start/End: Complemental strand, 20570776 - 20570714
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtc 102  Q
    |||||||||||||||||||||||||||||||||  ||| |||||||||||||||||| |||||    
T  20570776 tatatcgattctacaaaagtccttgagtaaaatctttcaattttgattgcgattttatgagtc 20570714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 37 - 115
Target Start/End: Original strand, 27221649 - 27221727
Alignment:
Q  37 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcctgactttgctat 115  Q
    ||||| ||||||||||||||||||   ||||||||| |||||||||||||||||||||||||| ||| || ||||||||    
T  27221649 tcctacatcgattctacaaaagtctccgagtaaaatccttcgattttgattgcgattttacgaatcccgattttgctat 27221727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 118 - 188
Target Start/End: Original strand, 39182394 - 39182464
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgatttt 188  Q
    ||||||||||||||||||||  ||||||||||| ||||||||||| |||||||||||||| | ||||||||    
T  39182394 tatatcgattctacaaaagtagttgagtaaaatccttcgattttggttgcgattttacgattgtcgatttt 39182464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 103
Target Start/End: Complemental strand, 8629657 - 8629556
Alignment:
Q  2 ttttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagt 101  Q
    |||||||||||||||||||| |  ||| ||| ||||||| |||||||||||||||| |||||||||||||  ||  |||| |||||||| ||||| ||||    
T  8629657 ttttgattgcgattttacgatttatgattttactatcctgtatcgattctacaaaattccttgagtaaaactctctgattgtgattgcgtttttatgagt 8629558  T
Q  102 cc 103  Q
    ||    
T  8629557 cc 8629556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 226
Target Start/End: Original strand, 4247594 - 4247701
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaagtaaagt 217  Q
    |||||||||||||||||| |||||||||||||| ||| || ||||||||||||||||||| |  | |||||  || |||||||| ||| | |||||||||    
T  4247594 tatatcgattctacaaaaatccttgagtaaaatcctttgaatttgattgcgattttacgaatcccaatttttgtattccctttcgacttg-aagtaaagt 4247692  T
Q  218 cccgatttt 226  Q
    ||| |||||    
T  4247693 cccaatttt 4247701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 4247594 - 4247653
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    |||||||||||||||||| |||||||||||||| ||| || |||||||||||||||||||    
T  4247594 tatatcgattctacaaaaatccttgagtaaaatcctttgaatttgattgcgattttacga 4247653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 154 - 201
Target Start/End: Complemental strand, 8254039 - 8253992
Alignment:
Q  154 tcgattttgattgcgattttacgagtttcgattttgctactccctttc 201  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  8254039 tcgattttgattgcgattttacgagtctcgattttgctactccctttc 8253992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 118 - 189
Target Start/End: Complemental strand, 26565439 - 26565368
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttg 189  Q
    ||||| ||||||||||||||  ||||||||||| |||||||||||||| ||||||||||| ||||| |||||    
T  26565439 tatattgattctacaaaagtagttgagtaaaatccttcgattttgattacgattttacgattttcgtttttg 26565368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 39182394 - 39182453
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    ||||||||||||||||||||  ||||||||||| ||||||||||| ||||||||||||||    
T  39182394 tatatcgattctacaaaagtagttgagtaaaatccttcgattttggttgcgattttacga 39182453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 118 - 191
Target Start/End: Original strand, 14055495 - 14055568
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgct 191  Q
    ||||||| ||||||||||||  ||||||||||| ||||||||||| |||||||||||| | | |||||||||||    
T  14055495 tatatcgtttctacaaaagtagttgagtaaaatccttcgattttggttgcgattttaccattgtcgattttgct 14055568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 118 - 191
Target Start/End: Original strand, 14365523 - 14365596
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgct 191  Q
    ||||||| ||||||||||||  ||||||||||| ||||||||||| |||||||||||| | | |||||||||||    
T  14365523 tatatcgtttctacaaaagtagttgagtaaaatccttcgattttggttgcgattttaccattgtcgattttgct 14365596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 118 - 191
Target Start/End: Complemental strand, 22687158 - 22687085
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgct 191  Q
    ||||||||||||||||||||  ||||||||||| |||| |||||| ||| |||||||||| | |||||||||||    
T  22687158 tatatcgattctacaaaagtagttgagtaaaattcttcaattttggttgtgattttacgattctcgattttgct 22687085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 8329935 - 8329876
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 177  Q
    |||||| |||||||||||||  ||||||||||| ||| ||||||||||||||||||||||    
T  8329935 tatatcaattctacaaaagtagttgagtaaaatcctttgattttgattgcgattttacga 8329876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 8329935 - 8329876
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    |||||| |||||||||||||  ||||||||||| ||| ||||||||||||||||||||||    
T  8329935 tatatcaattctacaaaagtagttgagtaaaatcctttgattttgattgcgattttacga 8329876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 8343693 - 8343634
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 177  Q
    |||||| |||||||||||||  ||||||||||||||||||||||||||||  ||||||||    
T  8343693 tatatcaattctacaaaagtagttgagtaaaatacttcgattttgattgcatttttacga 8343634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 8343693 - 8343634
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    |||||| |||||||||||||  ||||||||||||||||||||||||||||  ||||||||    
T  8343693 tatatcaattctacaaaagtagttgagtaaaatacttcgattttgattgcatttttacga 8343634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 26565439 - 26565380
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    ||||| ||||||||||||||  ||||||||||| |||||||||||||| |||||||||||    
T  26565439 tatattgattctacaaaagtagttgagtaaaatccttcgattttgattacgattttacga 26565380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 118 - 188
Target Start/End: Original strand, 1977787 - 1977856
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgatttt 188  Q
    ||||||||||||| |||| |  ||||||||||| |||||||||||||||||||||||||| | ||||||||    
T  1977787 tatatcgattctaaaaaa-taattgagtaaaatccttcgattttgattgcgattttacgattgtcgatttt 1977856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 122 - 192
Target Start/End: Original strand, 17741886 - 17741956
Alignment:
Q  122 tcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgcta 192  Q
    ||||||||| ||||||  || |||||||| |||| ||||||||||| ||||||||| ||||||||||||||    
T  17741886 tcgattctaaaaaagtagttaagtaaaatccttcaattttgattgcaattttacgattttcgattttgcta 17741956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 97
Target Start/End: Original strand, 14055495 - 14055552
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 97  Q
    ||||||| ||||||||||||  ||||||||||| ||||||||||| ||||||||||||    
T  14055495 tatatcgtttctacaaaagtagttgagtaaaatccttcgattttggttgcgattttac 14055552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 97
Target Start/End: Original strand, 14365523 - 14365580
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 97  Q
    ||||||| ||||||||||||  ||||||||||| ||||||||||| ||||||||||||    
T  14365523 tatatcgtttctacaaaagtagttgagtaaaatccttcgattttggttgcgattttac 14365580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 191
Target Start/End: Complemental strand, 21846338 - 21846265
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgct 191  Q
    ||||||||||||| ||||||  |||| |||||| ||||||||||| ||||||||||| || ||| |||||||||    
T  21846338 tatatcgattctataaaagtagttgattaaaatccttcgattttggttgcgattttaggatttttgattttgct 21846265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 201
Target Start/End: Complemental strand, 26340305 - 26340181
Alignment:
Q  76 tcgattttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 175  Q
    ||||||||||||| |||||||||| |    | |||  |||| ||||||||||||| ||||||  ||||||||||| |||||||||||||||||||  |||    
T  26340305 tcgattttgattgtgattttacgattttcaatttttatatcttatatcgattctataaaagtt-ttgagtaaaattcttcgattttgattgcgataatac 26340207  T
Q  176 gagtttcgattttgctactccctttc 201  Q
    |  |||| |||||  |||||||||||    
T  26340206 gtttttctattttattactccctttc 26340181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 1977787 - 1977845
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    ||||||||||||| |||| |  ||||||||||| ||||||||||||||||||||||||||    
T  1977787 tatatcgattctaaaaaa-taattgagtaaaatccttcgattttgattgcgattttacga 1977845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 5058767 - 5058825
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    ||||||||||| |||||| ||||||| |||||| |||||||||||||||| |||||||||    
T  5058767 tatatcgattc-acaaaattccttgattaaaatccttcgattttgattgcaattttacga 5058825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 8346422 - 8346363
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 177  Q
    |||||| |||||||||||||  ||||||||||| ||| ||||||||||||||| ||||||    
T  8346422 tatatcaattctacaaaagtagttgagtaaaatcctttgattttgattgcgatattacga 8346363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 8346422 - 8346363
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    |||||| |||||||||||||  ||||||||||| ||| ||||||||||||||| ||||||    
T  8346422 tatatcaattctacaaaagtagttgagtaaaatcctttgattttgattgcgatattacga 8346363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 177
Target Start/End: Complemental strand, 21157588 - 21157525
Alignment:
Q  114 atcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 177  Q
    ||||||||| ||||||||||||||  |||| |||||| |||| |||||||||| ||||||||||    
T  21157588 atcctatatagattctacaaaagtagttgaataaaatccttcaattttgattgagattttacga 21157525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 99
Target Start/End: Complemental strand, 21157588 - 21157525
Alignment:
Q  36 atcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    ||||||||| ||||||||||||||  |||| |||||| |||| |||||||||| ||||||||||    
T  21157588 atcctatatagattctacaaaagtagttgaataaaatccttcaattttgattgagattttacga 21157525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 22687158 - 22687099
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    ||||||||||||||||||||  ||||||||||| |||| |||||| ||| ||||||||||    
T  22687158 tatatcgattctacaaaagtagttgagtaaaattcttcaattttggttgtgattttacga 22687099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 26340268 - 26340212
Alignment:
Q  35 tatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgat 92  Q
    |||| ||||||||||||| ||||||  ||||||||||| |||||||||||||||||||    
T  26340268 tatcttatatcgattctataaaagtt-ttgagtaaaattcttcgattttgattgcgat 26340212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 192
Target Start/End: Original strand, 7307204 - 7307244
Alignment:
Q  152 cttcgattttgattgcgattttacgagtttcgattttgcta 192  Q
    |||||||||||||||||||||||||| || |||||||||||    
T  7307204 cttcgattttgattgcgattttacgatttgcgattttgcta 7307244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 174
Target Start/End: Complemental strand, 8329870 - 8329814
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgatttta 174  Q
    |||||| |||||||||||||  ||||||||||| |||| ||||||||||| ||||||    
T  8329870 tatatcaattctacaaaagtagttgagtaaaatccttcaattttgattgcaatttta 8329814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 8329870 - 8329814
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgatttta 96  Q
    |||||| |||||||||||||  ||||||||||| |||| ||||||||||| ||||||    
T  8329870 tatatcaattctacaaaagtagttgagtaaaatccttcaattttgattgcaatttta 8329814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 17809044 - 17809000
Alignment:
Q  157 attttgattgcgattttacgagtttcgattttgctactccctttc 201  Q
    ||||||||||||||||||||| |||||||||||||| ||| ||||    
T  17809044 attttgattgcgattttacgattttcgattttgctattccatttc 17809000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 21846338 - 21846282
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgatttta 96  Q
    ||||||||||||| ||||||  |||| |||||| ||||||||||| |||||||||||    
T  21846338 tatatcgattctataaaagtagttgattaaaatccttcgattttggttgcgatttta 21846282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 8572374 - 8572429
Alignment:
Q  39 ctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattt 94  Q
    ||||||| |||||||||| |||||||| ||| ||  ||||||||||||||||||||    
T  8572374 ctatatcaattctacaaatgtccttgattaacatctttcgattttgattgcgattt 8572429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 172
Target Start/End: Original strand, 8572374 - 8572429
Alignment:
Q  117 ctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattt 172  Q
    ||||||| |||||||||| |||||||| ||| ||  ||||||||||||||||||||    
T  8572374 ctatatcaattctacaaatgtccttgattaacatctttcgattttgattgcgattt 8572429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 120 - 191
Target Start/End: Original strand, 30294486 - 30294556
Alignment:
Q  120 tatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgct 191  Q
    ||||||||||| ||||||  || |||||||| ||||||||||||||| || ||||||| ||| |||||||||    
T  30294486 tatcgattctataaaagtagttaagtaaaatccttcgattttgattgtga-tttacgatttttgattttgct 30294556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 94
Target Start/End: Original strand, 30294486 - 30294538
Alignment:
Q  42 tatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattt 94  Q
    ||||||||||| ||||||  || |||||||| ||||||||||||||| |||||    
T  30294486 tatcgattctataaaagtagttaagtaaaatccttcgattttgattgtgattt 30294538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 102; Significance: 1e-50; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 76 - 233
Target Start/End: Complemental strand, 17197461 - 17197306
Alignment:
Q  76 tcgattttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 175  Q
    ||||||||||||||||||||| |||||| ||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||  ||||||||||||    
T  17197461 tcgattttgattgcgatttta-gagtcccgactttgctatcctacattgattctacaaaagtccttgagtaaaatccttcgattttagttgcgattttac 17197363  T
Q  176 gagtttcgattttgctactccctttctactcgaaagtaaagtcccgattttaataacc 233  Q
    ||||| |||||||||||||||||||| ||| | |||||||||||||||||| ||||||    
T  17197362 gagttccgattttgctactccctttcgacttg-aagtaaagtcccgattttgataacc 17197306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 78 - 226
Target Start/End: Complemental strand, 12002790 - 12002645
Alignment:
Q  78 gattttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 177  Q
    |||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||  |||||||||| |||||||||| |||| ||||||  ||    
T  12002790 gattttgattgcgattttacgagtcccgattttgctattctatatcgattctacaaaagtctatgagtaaaatccttcgatttttattgtgatttt--ga 12002693  T
Q  178 gtttcgattttgctactccctttctactcgaaagtaaagtcccgatttt 226  Q
    ||  | |||||||||||||||||| |||  ||| |||||||||||||||    
T  12002692 gtcccaattttgctactccctttcgact-taaattaaagtcccgatttt 12002645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 118 - 236
Target Start/End: Original strand, 13100428 - 13100545
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaagtaaagt 217  Q
    ||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||| | |||||||| ||| | |||||||||    
T  13100428 tatatcgattctacaaatgtccttgagtaaaatcctttgattttgattgcgattttacgagttccgattttgccattccctttcgacttg-aagtaaagt 13100526  T
Q  218 cccgattttaataaccttg 236  Q
    ||||||||| | |||||||    
T  13100527 cccgattttgacaaccttg 13100545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 17197458 - 17197346
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgag 100  Q
    |||||||||||||||||| |||||| ||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||  |||||||||||||||    
T  17197458 attttgattgcgatttta-gagtcccgactttgctatcctacattgattctacaaaagtccttgagtaaaatccttcgattttagttgcgattttacgag 17197360  T
Q  101 tcctgactttgcta 114  Q
    | | || |||||||    
T  17197359 ttccgattttgcta 17197346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 117 - 238
Target Start/End: Complemental strand, 25146660 - 25146540
Alignment:
Q  117 ctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaagtaaag 216  Q
    ||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||||| || ||||||||||| |||||||| || |  ||||||||    
T  25146660 ctatatcgattctacgaaagaccttgagtaaaatccttcgattttgattgcgattttacgatttccgattttgctattccctttcaac-ctgaagtaaag 25146562  T
Q  217 tcccgattttaataaccttggt 238  Q
    ||| |||||| | |||||||||    
T  25146561 tcctgattttgacaaccttggt 25146540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 115 - 235
Target Start/End: Complemental strand, 14074377 - 14074258
Alignment:
Q  115 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaagtaa 214  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||| | ||||||||| |||||||| || |  ||||||    
T  14074377 tcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgtgattttatgagttccaattttgctattccctttcgac-ctgaagtaa 14074279  T
Q  215 agtcccgattttaataacctt 235  Q
    ||||| |||||| | ||||||    
T  14074278 agtcctgattttgacaacctt 14074258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 118 - 201
Target Start/End: Complemental strand, 21846165 - 21846082
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttc 201  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||| ||||||||    
T  21846165 tatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttaagagtcccgattttgctattccctttc 21846082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 12002789 - 12002695
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgatttt 95  Q
    ||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||  |||||||||| |||||||||| |||| ||||||    
T  12002789 attttgattgcgattttacgagtcccgattttgctattctatatcgattctacaaaagtctatgagtaaaatccttcgatttttattgtgatttt 12002695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 23528891 - 23528957
Alignment:
Q  37 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcc 103  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  23528891 tcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgagtcc 23528957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 23528891 - 23528955
Alignment:
Q  115 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagt 179  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  23528891 tcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgagt 23528955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 118 - 233
Target Start/End: Complemental strand, 16125346 - 16125232
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaagtaaagt 217  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||  | ||||| ||| |||||||| || |  |||||||||    
T  16125346 tatatcgattctacaaatgtccttgagtaaaatccttcgattttgattgcgattttacgagtcccaattttactattccctttcgac-ctgaagtaaagt 16125248  T
Q  218 cccgattttaataacc 233  Q
     |||||||||| ||||    
T  16125247 tccgattttaacaacc 16125232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 40 - 115
Target Start/End: Complemental strand, 21846165 - 21846090
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcctgactttgctat 115  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| || ||||||||    
T  21846165 tatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttaagagtcccgattttgctat 21846090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 115 - 201
Target Start/End: Complemental strand, 19009842 - 19009756
Alignment:
Q  115 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttc 201  Q
    ||||||||||||| ||||||||| |||||||||||| ||| ||||||||||||||||||||||||  ||||||||||| ||||||||    
T  19009842 tcctatatcgattttacaaaagttcttgagtaaaatcctttgattttgattgcgattttacgagtcccgattttgctattccctttc 19009756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 76 - 179
Target Start/End: Original strand, 8773464 - 8773567
Alignment:
Q  76 tcgattttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 175  Q
    |||||||| |||||||||||| |||||| || ||| |||| ||||||| ||||||||||| ||||| |||||||| |||| ||||| |||||||||||||    
T  8773464 tcgatttttattgcgattttatgagtcccgattttactattctatatcaattctacaaaaatccttaagtaaaatccttcaattttaattgcgattttac 8773563  T
Q  176 gagt 179  Q
    ||||    
T  8773564 gagt 8773567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 40 - 103
Target Start/End: Complemental strand, 16125346 - 16125283
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcc 103  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  16125346 tatatcgattctacaaatgtccttgagtaaaatccttcgattttgattgcgattttacgagtcc 16125283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 115
Target Start/End: Complemental strand, 19009842 - 19009764
Alignment:
Q  37 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcctgactttgctat 115  Q
    ||||||||||||| ||||||||| |||||||||||| ||| |||||||||||||||||||||||||| || ||||||||    
T  19009842 tcctatatcgattttacaaaagttcttgagtaaaatcctttgattttgattgcgattttacgagtcccgattttgctat 19009764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 8773467 - 8773568
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgag 100  Q
    ||||| |||||||||||| |||||| || ||| |||| ||||||| ||||||||||| ||||| |||||||| |||| ||||| ||||||||||||||||    
T  8773467 atttttattgcgattttatgagtcccgattttactattctatatcaattctacaaaaatccttaagtaaaatccttcaattttaattgcgattttacgag 8773566  T
Q  101 tc 102  Q
    ||    
T  8773567 tc 8773568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 127 - 200
Target Start/End: Complemental strand, 42179953 - 42179880
Alignment:
Q  127 tctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactcccttt 200  Q
    |||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  42179953 tctacaaaagtcctcgaataaaatccttcgattttgattgcgattttacgagtttcgattatgctattcccttt 42179880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 14074377 - 14074313
Alignment:
Q  37 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagt 101  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||    
T  14074377 tcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgtgattttatgagt 14074313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 200
Target Start/End: Original strand, 16434737 - 16434829
Alignment:
Q  108 tttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactcccttt 200  Q
    |||| |||| |||||| |||||||||||||  | ||||||||| |||||||||||||||| ||||||||| |||||||||||||| |||||||    
T  16434737 tttgttatcttatatcaattctacaaaagttgtcgagtaaaatccttcgattttgattgcaattttacgattttcgattttgctattcccttt 16434829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 115 - 226
Target Start/End: Complemental strand, 9954927 - 9954817
Alignment:
Q  115 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaagtaa 214  Q
    |||||||| ||||||  ||||||||||  ||||||| ||||||||||||||||||||||||||||  ||||||||||| |||||||| || |  ||||||    
T  9954927 tcctatatggattcttgaaaagtcctttggtaaaatccttcgattttgattgcgattttacgagtcccgattttgctattccctttcgac-cttaagtaa 9954829  T
Q  215 agtcccgatttt 226  Q
    ||| ||||||||    
T  9954828 agttccgatttt 9954817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 115 - 201
Target Start/End: Complemental strand, 9351957 - 9351871
Alignment:
Q  115 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttc 201  Q
    |||||||| |||||||||||||||||||  |||||| || |||||||||||||||||||||||||  ||||||||||| || |||||    
T  9351957 tcctatatagattctacaaaagtccttggataaaatcctacgattttgattgcgattttacgagtcccgattttgctattcgctttc 9351871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 37 - 115
Target Start/End: Complemental strand, 9351957 - 9351879
Alignment:
Q  37 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcctgactttgctat 115  Q
    |||||||| |||||||||||||||||||  |||||| || ||||||||||||||||||||||||||| || ||||||||    
T  9351957 tcctatatagattctacaaaagtccttggataaaatcctacgattttgattgcgattttacgagtcccgattttgctat 9351879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 115 - 177
Target Start/End: Complemental strand, 18304705 - 18304643
Alignment:
Q  115 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 177  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||    
T  18304705 tcctatatcgattctacaaaagtcctttagtaaaatccttcgattttgaatgcgattttacga 18304643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 18304705 - 18304643
Alignment:
Q  37 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||    
T  18304705 tcctatatcgattctacaaaagtcctttagtaaaatccttcgattttgaatgcgattttacga 18304643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 101
Target Start/End: Original strand, 13100428 - 13100489
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagt 101  Q
    ||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||    
T  13100428 tatatcgattctacaaatgtccttgagtaaaatcctttgattttgattgcgattttacgagt 13100489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 103
Target Start/End: Complemental strand, 17055808 - 17055747
Alignment:
Q  42 tatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcc 103  Q
    ||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||    
T  17055808 tatcgattctacaaaagtagttgagtaaaatccttcgattttgattgcgattttacgagtcc 17055747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 120 - 188
Target Start/End: Complemental strand, 17055808 - 17055740
Alignment:
Q  120 tatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgatttt 188  Q
    ||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||  |||||||    
T  17055808 tatcgattctacaaaagtagttgagtaaaatccttcgattttgattgcgattttacgagtcccgatttt 17055740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 39 - 99
Target Start/End: Complemental strand, 25146660 - 25146600
Alignment:
Q  39 ctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    ||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||    
T  25146660 ctatatcgattctacgaaagaccttgagtaaaatccttcgattttgattgcgattttacga 25146600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 200
Target Start/End: Complemental strand, 9128730 - 9128647
Alignment:
Q  117 ctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactcccttt 200  Q
    |||||||||| |||||||| ||||| |||||||| ||||||||||||| | ||||||||||||  ||||||||||| |||||||    
T  9128730 ctatatcgatcctacaaaaatcctttagtaaaatccttcgattttgatcgtgattttacgagtcccgattttgctattcccttt 9128647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 37 - 115
Target Start/End: Complemental strand, 9954927 - 9954849
Alignment:
Q  37 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcctgactttgctat 115  Q
    |||||||| ||||||  ||||||||||  ||||||| |||||||||||||||||||||||||||||| || ||||||||    
T  9954927 tcctatatggattcttgaaaagtcctttggtaaaatccttcgattttgattgcgattttacgagtcccgattttgctat 9954849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 82 - 200
Target Start/End: Original strand, 22789385 - 22789503
Alignment:
Q  82 ttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagttt 181  Q
    |||||||| ||||||||| |   || ||| ||||| |||||||| ||||||||||||| | |||||||| ||| ||||||||||| |||||||||| ||     
T  22789385 ttgattgcaattttacgatttgcgatttttctatcatatatcgagtctacaaaagtccattagtaaaatcctttgattttgattgtgattttacgatttg 22789484  T
Q  182 cgattttgctactcccttt 200  Q
    ||||||| ||| |||||||    
T  22789485 cgatttttctaatcccttt 22789503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 76 - 201
Target Start/End: Complemental strand, 39845188 - 39845063
Alignment:
Q  76 tcgattttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 175  Q
    |||||||| |||||||||||| || |   ||||||||||||||||||||| | ||||||| |  |||||||||||  ||| ||||| ||||| |||||||    
T  39845188 tcgattttaattgcgattttatgattttcgactttgctatcctatatcgactttacaaaaatagttgagtaaaatcattcaattttaattgcaattttac 39845089  T
Q  176 gagtttcgattttgctactccctttc 201  Q
     | |||||||||||||| || |||||    
T  39845088 aattttcgattttgctattctctttc 39845063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 115
Target Start/End: Complemental strand, 9128730 - 9128654
Alignment:
Q  39 ctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcctgactttgctat 115  Q
    |||||||||| |||||||| ||||| |||||||| ||||||||||||| | |||||||||||||| || ||||||||    
T  9128730 ctatatcgatcctacaaaaatcctttagtaaaatccttcgattttgatcgtgattttacgagtcccgattttgctat 9128654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 124 - 200
Target Start/End: Complemental strand, 17869635 - 17869559
Alignment:
Q  124 gattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactcccttt 200  Q
    ||||||| ||||||||||||||||||| ||| ||||||||||||||||||||| ||  ||||||||||  |||||||    
T  17869635 gattctataaaagtccttgagtaaaatcctttgattttgattgcgattttacgtgtcccgattttgctcttcccttt 17869559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 46 - 113
Target Start/End: Complemental strand, 17869635 - 17869568
Alignment:
Q  46 gattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcctgactttgct 113  Q
    ||||||| ||||||||||||||||||| ||| ||||||||||||||||||||| |||| || ||||||    
T  17869635 gattctataaaagtccttgagtaaaatcctttgattttgattgcgattttacgtgtcccgattttgct 17869568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 118 - 191
Target Start/End: Original strand, 47786096 - 47786169
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgct 191  Q
    |||||| |||||||||||||  ||||||||||| ||||||||||| ||| |||||||||| | |||||||||||    
T  47786096 tatatcaattctacaaaagtagttgagtaaaatccttcgattttggttgtgattttacgattgtcgattttgct 47786169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 136 - 192
Target Start/End: Complemental strand, 9321608 - 9321552
Alignment:
Q  136 gtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgcta 192  Q
    |||||||  |||||| ||||||||||||||||||||||||||||| |||||||||||    
T  9321608 gtccttggataaaatccttcgattttgattgcgattttacgagttccgattttgcta 9321552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 101
Target Start/End: Complemental strand, 42179953 - 42179901
Alignment:
Q  49 tctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagt 101  Q
    |||||||||||||| || |||||| ||||||||||||||||||||||||||||    
T  42179953 tctacaaaagtcctcgaataaaatccttcgattttgattgcgattttacgagt 42179901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 22789385 - 22789480
Alignment:
Q  4 ttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    |||||||| ||||||||| |   || ||| ||||| |||||||| ||||||||||||| | |||||||| ||| ||||||||||| ||||||||||    
T  22789385 ttgattgcaattttacgatttgcgatttttctatcatatatcgagtctacaaaagtccattagtaaaatcctttgattttgattgtgattttacga 22789480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 16434737 - 16434806
Alignment:
Q  30 tttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    |||| |||| |||||| |||||||||||||  | ||||||||| |||||||||||||||| |||||||||    
T  16434737 tttgttatcttatatcaattctacaaaagttgtcgagtaaaatccttcgattttgattgcaattttacga 16434806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 191
Target Start/End: Original strand, 32881558 - 32881631
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgct 191  Q
    ||||||||||||||||| ||  ||||||||||| |||||||||   |||||||||||||| | |||||||||||    
T  32881558 tatatcgattctacaaacgtagttgagtaaaatccttcgatttcagttgcgattttacgattgtcgattttgct 32881631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 191
Target Start/End: Complemental strand, 41032664 - 41032591
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgct 191  Q
    |||||||||||||||||| |  ||||||||||| ||||||||||  |||||||||||||| | || ||||||||    
T  41032664 tatatcgattctacaaaactagttgagtaaaattcttcgattttagttgcgattttacgattatcaattttgct 41032591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 119 - 191
Target Start/End: Original strand, 30619181 - 30619252
Alignment:
Q  119 atatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgct 191  Q
    |||||||||||||||||||  ||||||||||| ||||||||||  |||||| ||||||| | |||||||||||    
T  30619181 atatcgattctacaaaagtagttgagtaaaatccttcgatttttgttgcga-tttacgattgtcgattttgct 30619252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 41032664 - 41032605
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    |||||||||||||||||| |  ||||||||||| ||||||||||  ||||||||||||||    
T  41032664 tatatcgattctacaaaactagttgagtaaaattcttcgattttagttgcgattttacga 41032605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 47786096 - 47786155
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    |||||| |||||||||||||  ||||||||||| ||||||||||| ||| ||||||||||    
T  47786096 tatatcaattctacaaaagtagttgagtaaaatccttcgattttggttgtgattttacga 47786155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 192
Target Start/End: Complemental strand, 27502230 - 27502172
Alignment:
Q  134 aagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgcta 192  Q
    |||| |||||||||||| |||||||||||||||| |||||| |||| ||| ||||||||    
T  27502230 aagttcttgagtaaaatccttcgattttgattgcaattttatgagtctcggttttgcta 27502172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 58 - 115
Target Start/End: Complemental strand, 9321608 - 9321551
Alignment:
Q  58 gtccttgagtaaaatacttcgattttgattgcgattttacgagtcctgactttgctat 115  Q
    |||||||  |||||| |||||||||||||||||||||||||||| | || ||||||||    
T  9321608 gtccttggataaaatccttcgattttgattgcgattttacgagttccgattttgctat 9321551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 94
Target Start/End: Original strand, 30619181 - 30619234
Alignment:
Q  41 atatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattt 94  Q
    |||||||||||||||||||  ||||||||||| ||||||||||  |||||||||    
T  30619181 atatcgattctacaaaagtagttgagtaaaatccttcgatttttgttgcgattt 30619234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 39845185 - 39845089
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 97  Q
    ||||| |||||||||||| || |   ||||||||||||||||||||| | ||||||| |  |||||||||||  ||| ||||| ||||| |||||||    
T  39845185 attttaattgcgattttatgattttcgactttgctatcctatatcgactttacaaaaatagttgagtaaaatcattcaattttaattgcaattttac 39845089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 32881558 - 32881617
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    ||||||||||||||||| ||  ||||||||||| |||||||||   ||||||||||||||    
T  32881558 tatatcgattctacaaacgtagttgagtaaaatccttcgatttcagttgcgattttacga 32881617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 102
Target Start/End: Complemental strand, 27502230 - 27502184
Alignment:
Q  56 aagtccttgagtaaaatacttcgattttgattgcgattttacgagtc 102  Q
    |||| |||||||||||| |||||||||||||||| |||||| |||||    
T  27502230 aagttcttgagtaaaatccttcgattttgattgcaattttatgagtc 27502184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 115
Target Start/End: Complemental strand, 13276109 - 13276072
Alignment:
Q  78 gattttgattgcgattttacgagtcctgactttgctat 115  Q
    |||| |||||||||||||||||||||||| ||||||||    
T  13276109 gattctgattgcgattttacgagtcctgattttgctat 13276072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 177
Target Start/End: Complemental strand, 21242928 - 21242859
Alignment:
Q  108 tttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 177  Q
    |||| |||| |||||||||||||||||| |  ||||||||||| |||| ||| | ||| |||||||||||    
T  21242928 tttgttatcttatatcgattctacaaaattagttgagtaaaattcttcaattgtaattacgattttacga 21242859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 21242928 - 21242859
Alignment:
Q  30 tttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    |||| |||| |||||||||||||||||| |  ||||||||||| |||| ||| | ||| |||||||||||    
T  21242928 tttgttatcttatatcgattctacaaaattagttgagtaaaattcttcaattgtaattacgattttacga 21242859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 9351915 - 9351879
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctat 37  Q
    ||||||||||||||||||||||||| || ||||||||    
T  9351915 attttgattgcgattttacgagtcccgattttgctat 9351879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 9954885 - 9954849
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctat 37  Q
    ||||||||||||||||||||||||| || ||||||||    
T  9954885 attttgattgcgattttacgagtcccgattttgctat 9954849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 12513518 - 12513582
Alignment:
Q  127 tctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgct 191  Q
    |||||| ||||  ||||||||||| ||| ||||||| |||||||||||| | | |||||||||||    
T  12513518 tctacagaagtagttgagtaaaatcctttgattttggttgcgattttacaattgtcgattttgct 12513582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 13276104 - 13276072
Alignment:
Q  5 tgattgcgattttacgagtcctgactttgctat 37  Q
    |||||||||||||||||||||||| ||||||||    
T  13276104 tgattgcgattttacgagtcctgattttgctat 13276072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 19009800 - 19009764
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctat 37  Q
    ||||||||||||||||||||||||| || ||||||||    
T  19009800 attttgattgcgattttacgagtcccgattttgctat 19009764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 101; Significance: 5e-50; HSPs: 64)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 76 - 236
Target Start/End: Original strand, 27890582 - 27890741
Alignment:
Q  76 tcgattttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 175  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||    
T  27890582 tcgattttgattgcgattttacgagtcctgattttgctatcctatatcgattctacaaaagtccttgagtaaaatccttcaattttgattacgattttac 27890681  T
Q  176 gagtttcgattttgctactccctttctactcgaaagtaaagtcccgattttaataaccttg 236  Q
    ||||| | ||||| |||||||||||| ||| | |||||||||| ||| ||| | |||||||    
T  27890682 gagttccaattttactactccctttcaacttg-aagtaaagtctcgaatttgacaaccttg 27890741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 27890585 - 27890685
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgag 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||    
T  27890585 attttgattgcgattttacgagtcctgattttgctatcctatatcgattctacaaaagtccttgagtaaaatccttcaattttgattacgattttacgag 27890684  T
Q  101 t 101  Q
    |    
T  27890685 t 27890685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 115 - 238
Target Start/End: Complemental strand, 11327456 - 11327334
Alignment:
Q  115 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaagtaa 214  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||| || |  ||||||    
T  11327456 tcctatatcgattctacaaaagtccttgagtaaaattcttcgattttgattgcgattttacgagtctcgattttgctattccctttcaac-ctgaagtaa 11327358  T
Q  215 agtcccgattttaataaccttggt 238  Q
    || ||||||||| | |||||||||    
T  11327357 agccccgattttgacaaccttggt 11327334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 115 - 236
Target Start/End: Original strand, 7223750 - 7223870
Alignment:
Q  115 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaagtaa 214  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||  ||||||||||| |||||||| || |  ||||||    
T  7223750 tcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcaattttacgagtcccgattttgctattccctttcgac-ctgaagtaa 7223848  T
Q  215 agtcccgattttaataaccttg 236  Q
    |||||||||||| | |||||||    
T  7223849 agtcccgattttgacaaccttg 7223870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 115 - 236
Target Start/End: Original strand, 19748568 - 19748688
Alignment:
Q  115 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaagtaa 214  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |  ||||||||||| |||||||| || |  || |||    
T  19748568 tcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgaatcccgattttgctattccctttcaac-ctgaattaa 19748666  T
Q  215 agtcccgattttaataaccttg 236  Q
    |||||||||||| | |||||||    
T  19748667 agtcccgattttgacaaccttg 19748688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 115 - 238
Target Start/End: Complemental strand, 15528004 - 15527882
Alignment:
Q  115 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaagtaa 214  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||||||| | |||||| || |  ||||||    
T  15528004 tcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttccgagttccgattttgctatttcctttcgac-ctgaagtaa 15527906  T
Q  215 agtcccgattttaataaccttggt 238  Q
    ||||  |||||| ||| |||||||    
T  15527905 agtcaggattttgatagccttggt 15527882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 115 - 238
Target Start/End: Original strand, 17103430 - 17103552
Alignment:
Q  115 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaagtaa 214  Q
    |||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||   ||||||| || |||||||| ||| | ||||||    
T  17103430 tcctatatcgattctacaaaagtccttgagtaaaatccttcggtattgattgcgattttacgagtcctgattttgttattccctttcgacttg-aagtaa 17103528  T
Q  215 agtcccgattttaataaccttggt 238  Q
    |||||||||||| | |||||||||    
T  17103529 agtcccgattttgacaaccttggt 17103552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 119 - 238
Target Start/End: Complemental strand, 17543620 - 17543502
Alignment:
Q  119 atatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaagtaaagtc 218  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||  ||||||||||| ||| |||| || |  ||||||||||    
T  17543620 atatcgattctacaaaagtccttgagtaaaatccttcgattttgatttcgattttatgagtcccgattttgctattccttttcgac-ctgaagtaaagtc 17543522  T
Q  219 ccgattttaataaccttggt 238  Q
    || ||||||| |||||||||    
T  17543521 ccaattttaacaaccttggt 17543502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 115
Target Start/End: Original strand, 7223750 - 7223828
Alignment:
Q  37 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcctgactttgctat 115  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| || ||||||||    
T  7223750 tcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcaattttacgagtcccgattttgctat 7223828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 115
Target Start/End: Complemental strand, 11327456 - 11327378
Alignment:
Q  37 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcctgactttgctat 115  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  || ||||||||    
T  11327456 tcctatatcgattctacaaaagtccttgagtaaaattcttcgattttgattgcgattttacgagtctcgattttgctat 11327378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 115
Target Start/End: Original strand, 19748568 - 19748646
Alignment:
Q  37 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcctgactttgctat 115  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| || ||||||||    
T  19748568 tcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgaatcccgattttgctat 19748646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 76 - 226
Target Start/End: Original strand, 31108351 - 31108500
Alignment:
Q  76 tcgattttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 175  Q
    |||||||||||||||||||||||| |   || |||||||||||| ||| ||| ||||||||||||| ||||||||  || ||||||||||||| ||||||    
T  31108351 tcgattttgattgcgattttacgatttacgattttgctatcctacatctattgtacaaaagtcctttagtaaaatcttttgattttgattgcggttttac 31108450  T
Q  176 gagtttcgattttgctactccctttctactcgaaagtaaagtcccgatttt 226  Q
    || | |||||||||||| |||||||| || |  ||||||||||| ||||||    
T  31108451 gaatctcgattttgctattccctttcgac-ctgaagtaaagtcctgatttt 31108500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 115 - 237
Target Start/End: Complemental strand, 7918244 - 7918123
Alignment:
Q  115 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaagtaa 214  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||   |||| ||||| |||||||| || |  ||||||    
T  7918244 tcctatattgattctacaaaagtccttgagtaaaattcttcgattttgattgcaattttacgagtcctgattctgctattccctttcgac-ctgaagtaa 7918146  T
Q  215 agtcccgattttaataaccttgg 237  Q
    || ||||||||| | ||||||||    
T  7918145 agccccgattttgacaaccttgg 7918123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 37 - 115
Target Start/End: Complemental strand, 7918244 - 7918166
Alignment:
Q  37 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcctgactttgctat 115  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| | ||||||    
T  7918244 tcctatattgattctacaaaagtccttgagtaaaattcttcgattttgattgcaattttacgagtcctgattctgctat 7918166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 37 - 115
Target Start/End: Complemental strand, 15528004 - 15527926
Alignment:
Q  37 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcctgactttgctat 115  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| | || ||||||||    
T  15528004 tcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttccgagttccgattttgctat 15527926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 37 - 111
Target Start/End: Original strand, 17103430 - 17103504
Alignment:
Q  37 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcctgactttg 111  Q
    |||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||| ||||    
T  17103430 tcctatatcgattctacaaaagtccttgagtaaaatccttcggtattgattgcgattttacgagtcctgattttg 17103504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 115 - 236
Target Start/End: Complemental strand, 22498334 - 22498214
Alignment:
Q  115 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaagtaa 214  Q
    |||||||||||||||||||||||| |||||||||||  ||| |||||||||||||||||||||||  | ||||||||| |||||||| || |  ||||||    
T  22498334 tcctatatcgattctacaaaagtctttgagtaaaatcgttcaattttgattgcgattttacgagtcccaattttgctattccctttcgac-ctgaagtaa 22498236  T
Q  215 agtcccgattttaataaccttg 236  Q
    |||||| ||||| | |||||||    
T  22498235 agtcccaattttgacaaccttg 22498214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 76 - 192
Target Start/End: Complemental strand, 20432526 - 20432410
Alignment:
Q  76 tcgattttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 175  Q
    |||||||||||||||| ||||||| |   || ||| ||| |||||||||||||||||||| |  || |||||||| |||| |||||||||||||||||||    
T  20432526 tcgattttgattgcgaatttacgattttggattttcctaccctatatcgattctacaaaactagttaagtaaaattcttcaattttgattgcgattttac 20432427  T
Q  176 gagtttcgattttgcta 192  Q
    || ||||||||||||||    
T  20432426 gattttcgattttgcta 20432410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 41 - 115
Target Start/End: Complemental strand, 17543620 - 17543546
Alignment:
Q  41 atatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcctgactttgctat 115  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||| || ||||||||    
T  17543620 atatcgattctacaaaagtccttgagtaaaatccttcgattttgatttcgattttatgagtcccgattttgctat 17543546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 76 - 201
Target Start/End: Complemental strand, 33593083 - 33592959
Alignment:
Q  76 tcgattttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 175  Q
    ||||||||||||||||||||| || |  ||| |||||||||||||||| |||||||||||||  |||||| ||||  |||||||| |||||| |||||||    
T  33593083 tcgattttgattgcgattttatgatttttgattttgctatcctatatcaattctacaaaagtagttgagt-aaatcattcgatttcgattgcaattttac 33592985  T
Q  176 gagtttcgattttgctactccctttc 201  Q
    || |||| |||||| || ||||||||    
T  33592984 gattttcaattttgttattccctttc 33592959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 22498334 - 22498268
Alignment:
Q  37 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcc 103  Q
    |||||||||||||||||||||||| |||||||||||  ||| |||||||||||||||||||||||||    
T  22498334 tcctatatcgattctacaaaagtctttgagtaaaatcgttcaattttgattgcgattttacgagtcc 22498268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 119 - 226
Target Start/End: Complemental strand, 26053186 - 26053080
Alignment:
Q  119 atatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaagtaaagtc 218  Q
    |||||||||||||||||||| |||||||||||  |||||||||||||| ||||||||||||  | ||||||||| | |||||| || |  ||||||||||    
T  26053186 atatcgattctacaaaagtcattgagtaaaatcattcgattttgattgggattttacgagtcccaattttgctatttcctttcgac-ctgaagtaaagtc 26053088  T
Q  219 ccgatttt 226  Q
    | ||||||    
T  26053087 ctgatttt 26053080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 119 - 226
Target Start/End: Complemental strand, 26073239 - 26073133
Alignment:
Q  119 atatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaagtaaagtc 218  Q
    |||||||||||||||||||| |||||||||||  |||||||||||||| ||||||||||||  | ||||||||| | |||||| || |  ||||||||||    
T  26073239 atatcgattctacaaaagtcattgagtaaaatcattcgattttgattgggattttacgagtcccaattttgctatttcctttcgac-ctgaagtaaagtc 26073141  T
Q  219 ccgatttt 226  Q
    | ||||||    
T  26073140 ctgatttt 26073133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 41 - 103
Target Start/End: Complemental strand, 26053186 - 26053124
Alignment:
Q  41 atatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcc 103  Q
    |||||||||||||||||||| |||||||||||  |||||||||||||| ||||||||||||||    
T  26053186 atatcgattctacaaaagtcattgagtaaaatcattcgattttgattgggattttacgagtcc 26053124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 41 - 103
Target Start/End: Complemental strand, 26073239 - 26073177
Alignment:
Q  41 atatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcc 103  Q
    |||||||||||||||||||| |||||||||||  |||||||||||||| ||||||||||||||    
T  26073239 atatcgattctacaaaagtcattgagtaaaatcattcgattttgattgggattttacgagtcc 26073177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 31108354 - 31108452
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    ||||||||||||||||||||| |   || |||||||||||| ||| ||| ||||||||||||| ||||||||  || ||||||||||||| ||||||||    
T  31108354 attttgattgcgattttacgatttacgattttgctatcctacatctattgtacaaaagtcctttagtaaaatcttttgattttgattgcggttttacga 31108452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 240
Target Start/End: Complemental strand, 4596751 - 4596623
Alignment:
Q  111 gctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaa 210  Q
    ||||||||||||| |||||| ||||||  ||||||| ||| |||| ||||||||||| ||||||| | |||  |||||||||||||||||| || |||||    
T  4596751 gctatcctatatcaattctagaaaagtaattgagtagaatccttcaattttgattgcaattttacaattttttattttgctactccctttcaac-cgaaa 4596653  T
Q  211 gtaaagtcccgattttaataaccttggtaa 240  Q
      ||| |||| ||||||| |||| ||||||    
T  4596652 acaaaatcccaattttaacaaccatggtaa 4596623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 118 - 226
Target Start/End: Complemental strand, 33583557 - 33583450
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgatt-ttgctactccctttctactcgaaagtaaag 216  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||  |||||||||| || ||||| ||||||  ||||||| || || |||||||     
T  33583557 tatatcgattctacaaaagtccttaagtaaaat-cttcgattttgattttgattttacgatttacgattattgctaacccctttcgac-cggaagtaaaa 33583460  T
Q  217 tcccgatttt 226  Q
    ||||||||||    
T  33583459 tcccgatttt 33583450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 40 - 115
Target Start/End: Complemental strand, 3573791 - 3573716
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcctgactttgctat 115  Q
    |||||| ||||||||| |||  ||||||||| | || |||||||||||||||||||||||||||||| ||||||||    
T  3573791 tatatctattctacaagagtagttgagtaaattcctacgattttgattgcgattttacgagtcctgattttgctat 3573716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 20432523 - 20432425
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    ||||||||||||| ||||||| |   || ||| ||| |||||||||||||||||||| |  || |||||||| |||| |||||||||||||||||||||    
T  20432523 attttgattgcgaatttacgattttggattttcctaccctatatcgattctacaaaactagttaagtaaaattcttcaattttgattgcgattttacga 20432425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 201
Target Start/End: Complemental strand, 27614550 - 27614464
Alignment:
Q  115 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttc 201  Q
    |||||||| | ||||||  ||||| ||||||||||| ||||||||||||||| ||||||||||||  ||||||| ||| ||||||||    
T  27614550 tcctatattgtttctactcaagtcattgagtaaaatccttcgattttgattgtgattttacgagtcccgattttactattccctttc 27614464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 33593080 - 33592983
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    |||||||||||||||||| || |  ||| |||||||||||||||| |||||||||||||  |||||| ||||  |||||||| |||||| |||||||||    
T  33593080 attttgattgcgattttatgatttttgattttgctatcctatatcaattctacaaaagtagttgagt-aaatcattcgatttcgattgcaattttacga 33592983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 117 - 189
Target Start/End: Complemental strand, 27233191 - 27233119
Alignment:
Q  117 ctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttg 189  Q
    ||||| ||||||||| |||| ||||||||||||| |||| |||||||||||||||||| ||||  ||||||||    
T  27233191 ctatagcgattctactaaagaccttgagtaaaatccttcaattttgattgcgattttatgagtcccgattttg 27233119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 103
Target Start/End: Complemental strand, 27233191 - 27233127
Alignment:
Q  39 ctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcc 103  Q
    ||||| ||||||||| |||| ||||||||||||| |||| |||||||||||||||||| ||||||    
T  27233191 ctatagcgattctactaaagaccttgagtaaaatccttcaattttgattgcgattttatgagtcc 27233127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 33583557 - 33583499
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||  ||||||||||    
T  33583557 tatatcgattctacaaaagtccttaagtaaaat-cttcgattttgattttgattttacga 33583499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 118 - 200
Target Start/End: Complemental strand, 3573791 - 3573709
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactcccttt 200  Q
    |||||| ||||||||| |||  ||||||||| | || |||||||||||||||||||||||||   |||||||||| |||||||    
T  3573791 tatatctattctacaagagtagttgagtaaattcctacgattttgattgcgattttacgagtcctgattttgctattcccttt 3573709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 27614550 - 27614484
Alignment:
Q  37 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcc 103  Q
    |||||||| | ||||||  ||||| ||||||||||| ||||||||||||||| ||||||||||||||    
T  27614550 tcctatattgtttctactcaagtcattgagtaaaatccttcgattttgattgtgattttacgagtcc 27614484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 8275415 - 8275366
Alignment:
Q  124 gattctacaaaagtccttgagtaaaatacttcgattttgattgcgatttt 173  Q
    |||| |||||||||||||||||||||| |||||||||| |||||||||||    
T  8275415 gattttacaaaagtccttgagtaaaatccttcgattttaattgcgatttt 8275366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 95
Target Start/End: Complemental strand, 8275415 - 8275366
Alignment:
Q  46 gattctacaaaagtccttgagtaaaatacttcgattttgattgcgatttt 95  Q
    |||| |||||||||||||||||||||| |||||||||| |||||||||||    
T  8275415 gattttacaaaagtccttgagtaaaatccttcgattttaattgcgatttt 8275366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 191
Target Start/End: Original strand, 23898049 - 23898121
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgct 191  Q
    ||||||||||||||||| ||  ||||||||||| ||||||||||| || ||||||||||| | |||||||||||    
T  23898049 tatatcgattctacaaa-gtagttgagtaaaatccttcgattttggtttcgattttacgattgtcgattttgct 23898121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 201
Target Start/End: Original strand, 31407505 - 31407630
Alignment:
Q  76 tcgattttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 175  Q
    |||| |||||||| |||||||||| |  ||| ||||||| |||||||| ||  || ||||||  |||||||||||  || ||||||||||| |||||||     
T  31407505 tcgactttgattgtgattttacgatttttgattttgctaccctatatccataatataaaagtagttgagtaaaatcttttgattttgattgtgattttat 31407604  T
Q  176 gagtttcgattttgctactccctttc 201  Q
     | ||||||||||| || ||||||||    
T  31407605 aattttcgattttgttattccctttc 31407630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 96
Target Start/End: Original strand, 1179049 - 1179119
Alignment:
Q  26 tgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttc-gattttgattgcgatttta 96  Q
    |||||||||||||||| || ||||||||||||||  ||||||||||| |||| |||||||||||||| ||||    
T  1179049 tgactttgctatccta-attgattctacaaaagtagttgagtaaaatccttcagattttgattgcgacttta 1179119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 174
Target Start/End: Original strand, 1179049 - 1179119
Alignment:
Q  104 tgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttc-gattttgattgcgatttta 174  Q
    |||||||||||||||| || ||||||||||||||  ||||||||||| |||| |||||||||||||| ||||    
T  1179049 tgactttgctatccta-attgattctacaaaagtagttgagtaaaatccttcagattttgattgcgacttta 1179119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 201
Target Start/End: Complemental strand, 30912297 - 30912214
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttc 201  Q
    |||||||||| |||||||||  |||| |||||| |||| |||||| ||| |||||||||| | |||||||||||| || |||||    
T  30912297 tatatcgattttacaaaagtagttgaataaaatccttcaattttggttgagattttacgattatcgattttgctattctctttc 30912214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 103
Target Start/End: Original strand, 17250299 - 17250359
Alignment:
Q  45 cgattctacaaaagtccttgagtaaaatacttcg--attttgattgcgattttacgagtcc 103  Q
    ||||||||| |||| ||||||||||||| ||||   |||||||||||||||||||||||||    
T  17250299 cgattctactaaagaccttgagtaaaatccttctttattttgattgcgattttacgagtcc 17250359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 3573752 - 3573716
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctat 37  Q
    |||||||||||||||||||||||||||| ||||||||    
T  3573752 attttgattgcgattttacgagtcctgattttgctat 3573716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 4596751 - 4596687
Alignment:
Q  33 gctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 97  Q
    ||||||||||||| |||||| ||||||  ||||||| ||| |||| ||||||||||| |||||||    
T  4596751 gctatcctatatcaattctagaaaagtaattgagtagaatccttcaattttgattgcaattttac 4596687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 197
Target Start/End: Complemental strand, 18490556 - 18490516
Alignment:
Q  157 attttgattgcgattttacgagtttcgattttgctactccc 197  Q
    ||||||||||||||||||||| ||||||||||||| |||||    
T  18490556 attttgattgcgattttacgaatttcgattttgctcctccc 18490516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 123 - 179
Target Start/End: Original strand, 17250299 - 17250357
Alignment:
Q  123 cgattctacaaaagtccttgagtaaaatacttcg--attttgattgcgattttacgagt 179  Q
    ||||||||| |||| ||||||||||||| ||||   |||||||||||||||||||||||    
T  17250299 cgattctactaaagaccttgagtaaaatccttctttattttgattgcgattttacgagt 17250357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 115
Target Start/End: Original strand, 21354949 - 21354988
Alignment:
Q  76 tcgattttgattgcgattttacgagtcctgactttgctat 115  Q
    ||||||||||||||||||||||||||||||| ||| ||||    
T  21354949 tcgattttgattgcgattttacgagtcctgatttttctat 21354988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 23898049 - 23898107
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    ||||||||||||||||| ||  ||||||||||| ||||||||||| || |||||||||||    
T  23898049 tatatcgattctacaaa-gtagttgagtaaaatccttcgattttggtttcgattttacga 23898107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 171
Target Start/End: Original strand, 28669499 - 28669594
Alignment:
Q  76 tcgattttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgatt 171  Q
    |||||||| ||||||||||||||| |   || ||| |||||||| ||||||||||||||| |  || |||||||| ||||  |||| |||||||||    
T  28669499 tcgattttaattgcgattttacgattttcgattttactatcctacatcgattctacaaaaatagttaagtaaaatccttcattttttattgcgatt 28669594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 173
Target Start/End: Complemental strand, 4841715 - 4841665
Alignment:
Q  123 cgattctacaaaagtccttgagtaaaatacttcgattttgattgcgatttt 173  Q
    |||||||||||||||  ||||||||||| ||| ||||||||||| ||||||    
T  4841715 cgattctacaaaagtagttgagtaaaatcctttgattttgattgtgatttt 4841665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 95
Target Start/End: Complemental strand, 4841715 - 4841665
Alignment:
Q  45 cgattctacaaaagtccttgagtaaaatacttcgattttgattgcgatttt 95  Q
    |||||||||||||||  ||||||||||| ||| ||||||||||| ||||||    
T  4841715 cgattctacaaaagtagttgagtaaaatcctttgattttgattgtgatttt 4841665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 236
Target Start/End: Original strand, 21354949 - 21355030
Alignment:
Q  154 tcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaagtaaagtcccgattttaataaccttg 236  Q
    ||||||||||||||||||||||||||   |||||| ||| |||||||| ||| | ||||||| |||| ||||| | |||||||    
T  21354949 tcgattttgattgcgattttacgagtcctgatttttctattccctttcaacttg-aagtaaaatcccaattttgacaaccttg 21355030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 177
Target Start/End: Complemental strand, 4841759 - 4841726
Alignment:
Q  144 gtaaaatacttcgattttgattgcgattttacga 177  Q
    ||||||||| ||||||||||||||||||||||||    
T  4841759 gtaaaatacatcgattttgattgcgattttacga 4841726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 99
Target Start/End: Complemental strand, 4841759 - 4841726
Alignment:
Q  66 gtaaaatacttcgattttgattgcgattttacga 99  Q
    ||||||||| ||||||||||||||||||||||||    
T  4841759 gtaaaatacatcgattttgattgcgattttacga 4841726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 23506102 - 23506163
Alignment:
Q  140 ttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttc 201  Q
    |||| |||||| |||||||||| |||| |||||||| | |||||||||||||| || |||||    
T  23506102 ttgactaaaatccttcgattttaattgtgattttacaattttcgattttgctattctctttc 23506163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 333
Target Start/End: Complemental strand, 30950108 - 30950075
Alignment:
Q  300 gttcatcaagcaccatataaatcccacaccatag 333  Q
    ||||||||||||||||||||| ||||||||||||    
T  30950108 gttcatcaagcaccatataaaacccacaccatag 30950075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 31407510 - 31407603
Alignment:
Q  3 tttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgatttta 96  Q
    |||||||| |||||||||| |  ||| ||||||| |||||||| ||  || ||||||  |||||||||||  || ||||||||||| |||||||    
T  31407510 tttgattgtgattttacgatttttgattttgctaccctatatccataatataaaagtagttgagtaaaatcttttgattttgattgtgatttta 31407603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 164
Target Start/End: Complemental strand, 7621876 - 7621820
Alignment:
Q  108 tttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgat 164  Q
    ||||||||| |||||  |||||||||||||  ||||||||||| |||| ||||||||    
T  7621876 tttgctatcatatattaattctacaaaagtagttgagtaaaattcttcaattttgat 7621820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 86
Target Start/End: Complemental strand, 7621876 - 7621820
Alignment:
Q  30 tttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgat 86  Q
    ||||||||| |||||  |||||||||||||  ||||||||||| |||| ||||||||    
T  7621876 tttgctatcatatattaattctacaaaagtagttgagtaaaattcttcaattttgat 7621820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 21354952 - 21354988
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctat 37  Q
    |||||||||||||||||||||||||||| ||| ||||    
T  21354952 attttgattgcgattttacgagtcctgatttttctat 21354988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 28669502 - 28669594
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgatt 93  Q
    ||||| ||||||||||||||| |   || ||| |||||||| ||||||||||||||| |  || |||||||| ||||  |||| |||||||||    
T  28669502 attttaattgcgattttacgattttcgattttactatcctacatcgattctacaaaaatagttaagtaaaatccttcattttttattgcgatt 28669594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 97; Significance: 1e-47; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 76 - 236
Target Start/End: Original strand, 41427615 - 41427774
Alignment:
Q  76 tcgattttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 175  Q
    |||||||||||||| ||||||| | |||  | ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  41427615 tcgattttgattgcaattttacaattccctattttgctatcctatatcgattctacaaaagtcctcgagtaaaatccttcgattttgattgcgattttac 41427714  T
Q  176 gagtttcgattttgctactccctttctactcgaaagtaaagtcccgattttaataaccttg 236  Q
    ||||  |||||||||||||||||||| ||||| |||||||||| ||||||| | |||||||    
T  41427715 gagtcccgattttgctactccctttcgactcg-aagtaaagtctcgattttgacaaccttg 41427774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 76 - 235
Target Start/End: Complemental strand, 15052024 - 15051872
Alignment:
Q  76 tcgattttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 175  Q
    |||||||||||||||||||||||||| | ||||||||||||||||      |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15052024 tcgattttgattgcgattttacgagttccgactttgctatcctat------tctacaaaagtccttgagtaaaatccttcgattttgattgcgattttac 15051931  T
Q  176 gagtttcgattttgctactccctttctactcgaaagtaaagtcccgattttaataacctt 235  Q
    ||||  ||||||||||||||| |||| ||| | |||||||||||||||||| ||||||||    
T  15051930 gagtcccgattttgctactccttttcgacttg-aagtaaagtcccgattttgataacctt 15051872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 41427618 - 41427731
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgag 100  Q
    ||||||||||| ||||||| | |||  | ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  41427618 attttgattgcaattttacaattccctattttgctatcctatatcgattctacaaaagtcctcgagtaaaatccttcgattttgattgcgattttacgag 41427717  T
Q  101 tcctgactttgcta 114  Q
    ||| || |||||||    
T  41427718 tcccgattttgcta 41427731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 15052021 - 15051914
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgag 100  Q
    ||||||||||||||||||||||| | ||||||||||||||||      |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  15052021 attttgattgcgattttacgagttccgactttgctatcctat------tctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgag 15051928  T
Q  101 tcctgactttgcta 114  Q
    ||| || |||||||    
T  15051927 tcccgattttgcta 15051914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 115 - 226
Target Start/End: Original strand, 18843950 - 18844060
Alignment:
Q  115 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaagtaa 214  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||| |||||||| || |  ||||||    
T  18843950 tcctatatggattctacaaaagtccttgagtaaaatactccgattttgattgcgattttacgagtcccgattttgctattccctttcgac-ctgaagtaa 18844048  T
Q  215 agtcccgatttt 226  Q
    ||| ||||||||    
T  18844049 agttccgatttt 18844060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 118 - 235
Target Start/End: Complemental strand, 27340078 - 27339962
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaagtaaagt 217  Q
    |||||| ||||||||||||||| |||||||||| ||||||||||||||||||||| |||| |||||||||||||| |||||||| ||| | |||||||||    
T  27340078 tatatcaattctacaaaagtccgtgagtaaaatccttcgattttgattgcgatttcacgattttcgattttgctattccctttcaacttg-aagtaaagt 27339980  T
Q  218 cccgattttaataacctt 235  Q
     |||||||| | ||||||    
T  27339979 tccgattttgacaacctt 27339962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 115
Target Start/End: Original strand, 18843950 - 18844028
Alignment:
Q  37 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcctgactttgctat 115  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||    
T  18843950 tcctatatggattctacaaaagtccttgagtaaaatactccgattttgattgcgattttacgagtcccgattttgctat 18844028  T

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Target: chr5; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 117 - 235
Target Start/End: Complemental strand, 41688558 - 41688441
Alignment:
Q  117 ctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaagtaaag 216  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||| ||||  ||||||||||| ||||||||  | | |||||||||    
T  41688558 ctatatcgattctacaaaagtccttaagtaaaatccttcgattttggttgcgattttaggagtcccgattttgctattccctttcgtc-ctaaagtaaag 41688460  T
Q  217 tcccgattttaataacctt 235  Q
    |||||||||| | ||||||    
T  41688459 tcccgattttgacaacctt 41688441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 118 - 236
Target Start/End: Original strand, 43235106 - 43235223
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaagtaaagt 217  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||   |||||||||| ||||||||  |||| |||||||||    
T  43235106 tatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattttatgagtactgattttgctattccctttcgtctcg-aagtaaagt 43235204  T
Q  218 cccgattttaataaccttg 236  Q
    ||| ||||| | |||||||    
T  43235205 cccaattttgacaaccttg 43235223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 90 - 201
Target Start/End: Original strand, 19377813 - 19377924
Alignment:
Q  90 gattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttg 189  Q
    ||||||||||||   || ||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||  | ||||||| | |||||||||    
T  19377813 gattttacgagtttcgagtttactatcttatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgtaaatttacgattctcgattttg 19377912  T
Q  190 ctactccctttc 201  Q
    ||| ||||||||    
T  19377913 ctattccctttc 19377924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 40 - 115
Target Start/End: Original strand, 43235106 - 43235181
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcctgactttgctat 115  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||| |||| ||||||||    
T  43235106 tatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattttatgagtactgattttgctat 43235181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 201
Target Start/End: Complemental strand, 22984702 - 22984605
Alignment:
Q  108 tttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcg----attttacgagtttcgattttgctactccctttc 201  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||     ||||||||| || ||||||||||| ||| ||||    
T  22984702 tttgctatcctatatcgattctacaaaattccttgagtaaaatccttcgattttgattgcatgcaattttacgatttacgattttgctattccttttc 22984605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 39 - 115
Target Start/End: Complemental strand, 41688558 - 41688482
Alignment:
Q  39 ctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcctgactttgctat 115  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||| |||||| || ||||||||    
T  41688558 ctatatcgattctacaaaagtccttaagtaaaatccttcgattttggttgcgattttaggagtcccgattttgctat 41688482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 115 - 226
Target Start/End: Complemental strand, 18051427 - 18051317
Alignment:
Q  115 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaagtaa 214  Q
    ||||||||||||||||||||||||||| | |||||| ||| |||||||||||||||| ||| |||  ||||||| ||| |||||||| || | |||||||    
T  18051427 tcctatatcgattctacaaaagtccttcaataaaattctttgattttgattgcgattctacaagtcccgatttttctattccctttcgac-ctaaagtaa 18051329  T
Q  215 agtcccgatttt 226  Q
    | ||||||||||    
T  18051328 aatcccgatttt 18051317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 30 - 89
Target Start/End: Complemental strand, 22984702 - 22984643
Alignment:
Q  30 tttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgc 89  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  22984702 tttgctatcctatatcgattctacaaaattccttgagtaaaatccttcgattttgattgc 22984643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 115 - 201
Target Start/End: Complemental strand, 19042322 - 19042236
Alignment:
Q  115 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttc 201  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||| |||| ||||||||||||  | ||||||||| | ||||||    
T  19042322 tcctatatcgattctacaaaagtccttaagtaaaattcttcgattttaattgtgattttacgagtccctattttgctatttcctttc 19042236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 19042322 - 19042256
Alignment:
Q  37 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcc 103  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||| |||| ||||||||||||||    
T  19042322 tcctatatcgattctacaaaagtccttaagtaaaattcttcgattttaattgtgattttacgagtcc 19042256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 117 - 226
Target Start/End: Original strand, 19579180 - 19579289
Alignment:
Q  117 ctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgc-tactccctttctactcgaaagtaaa 215  Q
    ||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||  | ||||||| ||||||||||| || |  |||||||    
T  19579180 ctataacgattctacaaaagtccttgagtgaaatccttcgattttgattgcgattttatgagtcccaattttgcttactccctttcgac-ctgaagtaaa 19579278  T
Q  216 gtcccgatttt 226  Q
     ||||||||||    
T  19579279 atcccgatttt 19579289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 19377813 - 19377889
Alignment:
Q  12 gattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattg 88  Q
    ||||||||||||   || ||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  19377813 gattttacgagtttcgagtttactatcttatatcgattctacaaaagtccttgagtaaaatccttcgattttgattg 19377889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 39 - 103
Target Start/End: Original strand, 19579180 - 19579244
Alignment:
Q  39 ctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcc 103  Q
    ||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||    
T  19579180 ctataacgattctacaaaagtccttgagtgaaatccttcgattttgattgcgattttatgagtcc 19579244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 76 - 174
Target Start/End: Original strand, 15446408 - 15446506
Alignment:
Q  76 tcgattttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgatttta 174  Q
    ||||||||||||||||||||||||||   || ||||||||| ||||||||||||||||||||  | || |||||| ||||| ||| ||||| |||||||    
T  15446408 tcgattttgattgcgattttacgagtttcgattttgctatcttatatcgattctacaaaagtagtcgactaaaatccttcggtttcgattgtgatttta 15446506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 20321178 - 20321244
Alignment:
Q  37 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcc 103  Q
    |||||||| |||||||||||||||||| |||||||| |||| |||||||||||||||||| ||||||    
T  20321178 tcctatatagattctacaaaagtccttcagtaaaatccttcaattttgattgcgattttatgagtcc 20321244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 115 - 188
Target Start/End: Original strand, 20321178 - 20321251
Alignment:
Q  115 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgatttt 188  Q
    |||||||| |||||||||||||||||| |||||||| |||| |||||||||||||||||| ||||  |||||||    
T  20321178 tcctatatagattctacaaaagtccttcagtaaaatccttcaattttgattgcgattttatgagtcccgatttt 20321251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 23172322 - 23172265
Alignment:
Q  115 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattt 172  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||    
T  23172322 tcctatatcgattctacaaaagtctttgagtaaaattcttcgattttgattacgattt 23172265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 23172322 - 23172265
Alignment:
Q  37 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattt 94  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||    
T  23172322 tcctatatcgattctacaaaagtctttgagtaaaattcttcgattttgattacgattt 23172265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 15446411 - 15446506
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgatttta 96  Q
    |||||||||||||||||||||||   || ||||||||| ||||||||||||||||||||  | || |||||| ||||| ||| ||||| |||||||    
T  15446411 attttgattgcgattttacgagtttcgattttgctatcttatatcgattctacaaaagtagtcgactaaaatccttcggtttcgattgtgatttta 15446506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 118 - 201
Target Start/End: Original strand, 24648247 - 24648330
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttc 201  Q
    ||||| ||||||||||||||  ||||||||||| ||| |||||||||| ||||||||||| |||||||||| ||  ||||||||    
T  24648247 tatattgattctacaaaagtagttgagtaaaatcctttgattttgattacgattttacgattttcgattttactcttccctttc 24648330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 27340078 - 27340019
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    |||||| ||||||||||||||| |||||||||| ||||||||||||||||||||| ||||    
T  27340078 tatatcaattctacaaaagtccgtgagtaaaatccttcgattttgattgcgatttcacga 27340019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 201
Target Start/End: Complemental strand, 13341630 - 13341505
Alignment:
Q  76 tcgattttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 175  Q
    |||||||||||||||||||||  | |  ||| ||||||||||||||||||||||||||||||  | |||| |||| |||| |||| | ||||||||||||    
T  13341630 tcgattttgattgcgattttaaaatttttgattttgctatcctatatcgattctacaaaagtagtcgagt-aaatccttcaatttcgtttgcgattttac 13341532  T
Q  176 ga-gtttcgattttgctactccctttc 201  Q
    ||  |||| ||||| ||| ||||||||    
T  13341531 gatttttcaatttttctattccctttc 13341505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 18051427 - 18051361
Alignment:
Q  37 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcc 103  Q
    ||||||||||||||||||||||||||| | |||||| ||| |||||||||||||||| ||| |||||    
T  18051427 tcctatatcgattctacaaaagtccttcaataaaattctttgattttgattgcgattctacaagtcc 18051361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 134 - 200
Target Start/End: Complemental strand, 22645602 - 22645536
Alignment:
Q  134 aagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactcccttt 200  Q
    ||||| ||||||||||| |||||||||||||||| ||||||||||| || ||||||||| |||||||    
T  22645602 aagtctttgagtaaaatccttcgattttgattgcaattttacgagtctcaattttgctattcccttt 22645536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 115 - 235
Target Start/End: Complemental strand, 43005753 - 43005634
Alignment:
Q  115 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaagtaa 214  Q
    ||||||||||||||||||||||   |||||||||||  ||| ||||||||||||||||||| | |||||| ||| ||| | |||||| | || |||| ||    
T  43005753 tcctatatcgattctacaaaagaagttgagtaaaatctttcaattttgattgcgattttacaattttcgaattttctatttcctttcga-tctaaagcaa 43005655  T
Q  215 agtcccgattttaataacctt 235  Q
    | |||||||||| | ||||||    
T  43005654 aatcccgattttgacaacctt 43005634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 13341627 - 13341530
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    ||||||||||||||||||  | |  ||| ||||||||||||||||||||||||||||||  | |||| |||| |||| |||| | ||||||||||||||    
T  13341627 attttgattgcgattttaaaatttttgattttgctatcctatatcgattctacaaaagtagtcgagt-aaatccttcaatttcgtttgcgattttacga 13341530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 154 - 192
Target Start/End: Original strand, 15446408 - 15446446
Alignment:
Q  154 tcgattttgattgcgattttacgagtttcgattttgcta 192  Q
    |||||||||||||||||||||||||||||||||||||||    
T  15446408 tcgattttgattgcgattttacgagtttcgattttgcta 15446446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 43005753 - 43005693
Alignment:
Q  37 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 97  Q
    ||||||||||||||||||||||   |||||||||||  ||| |||||||||||||||||||    
T  43005753 tcctatatcgattctacaaaagaagttgagtaaaatctttcaattttgattgcgattttac 43005693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 24648247 - 24648306
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    ||||| ||||||||||||||  ||||||||||| ||| |||||||||| |||||||||||    
T  24648247 tatattgattctacaaaagtagttgagtaaaatcctttgattttgattacgattttacga 24648306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 102
Target Start/End: Complemental strand, 22645602 - 22645556
Alignment:
Q  56 aagtccttgagtaaaatacttcgattttgattgcgattttacgagtc 102  Q
    ||||| ||||||||||| |||||||||||||||| ||||||||||||    
T  22645602 aagtctttgagtaaaatccttcgattttgattgcaattttacgagtc 22645556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 17624837 - 17624898
Alignment:
Q  38 cctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    ||||||| ||||  ||||||||  |||||||||||  || ||||||||||||||||||||||    
T  17624837 cctatattgatttaacaaaagtagttgagtaaaatcttttgattttgattgcgattttacga 17624898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 17624837 - 17624898
Alignment:
Q  116 cctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 177  Q
    ||||||| ||||  ||||||||  |||||||||||  || ||||||||||||||||||||||    
T  17624837 cctatattgatttaacaaaagtagttgagtaaaatcttttgattttgattgcgattttacga 17624898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 30799629 - 30799682
Alignment:
Q  34 ctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgatt 87  Q
    ||||| ||||||||||||||||||||  ||| ||||||| ||||||||| ||||    
T  30799629 ctatcatatatcgattctacaaaagtagttgtgtaaaatccttcgatttcgatt 30799682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 165
Target Start/End: Original strand, 30799629 - 30799682
Alignment:
Q  112 ctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgatt 165  Q
    ||||| ||||||||||||||||||||  ||| ||||||| ||||||||| ||||    
T  30799629 ctatcatatatcgattctacaaaagtagttgtgtaaaatccttcgatttcgatt 30799682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 18843992 - 18844028
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctat 37  Q
    ||||||||||||||||||||||||| || ||||||||    
T  18843992 attttgattgcgattttacgagtcccgattttgctat 18844028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 38158149 - 38158101
Alignment:
Q  124 gattctacaaaagtccttgagtaaaatacttcgattttgattgcgattt 172  Q
    |||||||||||| |  ||||||||||| ||||||||||| |||||||||    
T  38158149 gattctacaaaaatagttgagtaaaatccttcgattttggttgcgattt 38158101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 38158149 - 38158101
Alignment:
Q  46 gattctacaaaagtccttgagtaaaatacttcgattttgattgcgattt 94  Q
    |||||||||||| |  ||||||||||| ||||||||||| |||||||||    
T  38158149 gattctacaaaaatagttgagtaaaatccttcgattttggttgcgattt 38158101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0526 (Bit Score: 89; Significance: 7e-43; HSPs: 2)
Name: scaffold0526
Description:

Target: scaffold0526; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 76 - 236
Target Start/End: Original strand, 8352 - 8511
Alignment:
Q  76 tcgattttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 175  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| || |||||||||||||| |||||||||||| ||| ||||||     
T  8352 tcgattttgattgcgattttacgagtcccgactttgctatcctatatcaattctacacaactccttgagtaaaatccttcgattttgactgcaattttat 8451  T
Q  176 gagtttcgattttgctactccctttctactcgaaagtaaagtcccgattttaataaccttg 236  Q
    ||||  | ||||| |||||||||||| |||  |||||||| |||||||||| |||||||||    
T  8452 gagtcccaattttactactccctttcgact-taaagtaaactcccgattttgataaccttg 8511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0526; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 8355 - 8457
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgag 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||||| || |||||||||||||| |||||||||||| ||| |||||| |||    
T  8355 attttgattgcgattttacgagtcccgactttgctatcctatatcaattctacacaactccttgagtaaaatccttcgattttgactgcaattttatgag 8454  T
Q  101 tcc 103  Q
    |||    
T  8455 tcc 8457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 88; Significance: 3e-42; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 133045 - 132942
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgag 100  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  133045 attttgattgcgattttacgagtcccgactttgctatcctacatcgattctacaaaagtccttgaggaaaatccttcgattttgattgcgattttacgag 132946  T
Q  101 tcct 104  Q
    ||||    
T  132945 tcct 132942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 78 - 179
Target Start/End: Complemental strand, 133046 - 132945
Alignment:
Q  78 gattttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 177  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  133046 gattttgattgcgattttacgagtcccgactttgctatcctacatcgattctacaaaagtccttgaggaaaatccttcgattttgattgcgattttacga 132947  T
Q  178 gt 179  Q
    ||    
T  132946 gt 132945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2084 (Bit Score: 83; Significance: 3e-39; HSPs: 2)
Name: scaffold2084
Description:

Target: scaffold2084; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 79 - 237
Target Start/End: Original strand, 28 - 184
Alignment:
Q  79 attttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgag 178  Q
    ||||||||||||| ||||||||||| ||||||||||||||| ||| ||| |||||| ||||||||||||||| |||||||||| ||| | ||||||||||    
T  28 attttgattgcgactttacgagtcccgactttgctatcctacatcaattttacaaa-gtccttgagtaaaatccttcgattttaattacaattttacgag 126  T
Q  179 tttcgattttgctactccctttctactcgaaagtaaagtcccgattttaataaccttgg 237  Q
    |  |||||||||||||||||||  ||| | |||||||||||||||||| ||||||||||    
T  127 tcccgattttgctactcccttttgacttg-aagtaaagtcccgattttgataaccttgg 184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2084; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 28 - 140
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgag 100  Q
    ||||||||||||| ||||||||||| ||||||||||||||| ||| ||| ||| |||||||||||||||||| |||||||||| ||| | ||||||||||    
T  28 attttgattgcgactttacgagtcccgactttgctatcctacatcaattttac-aaagtccttgagtaaaatccttcgattttaattacaattttacgag 126  T
Q  101 tcctgactttgcta 114  Q
    ||| || |||||||    
T  127 tcccgattttgcta 140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 77; Significance: 1e-35; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 74 - 238
Target Start/End: Complemental strand, 38461 - 38299
Alignment:
Q  74 cttcgattttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgatttt 173  Q
    |||||||||| |||||||||||||||||   || |||||||||||| ||||||||||||||||||| |||||||||| |||||| | ||||||| |||||    
T  38461 cttcgattttaattgcgattttacgagtagcgattttgctatcctacatcgattctacaaaagtccatgagtaaaatccttcga-tctgattgcaatttt 38363  T
Q  174 acgagtttcgattttgctactccctttctactcgaaagtaaagtcccgattttaataaccttggt 238  Q
    ||||||  ||||||||||| | |||||| ||| | |||||||||||||||||| | |||||||||    
T  38362 acgagtcccgattttgctatttcctttcgacttg-aagtaaagtcccgattttgacaaccttggt 38299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 38456 - 38343
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgag 100  Q
    ||||| |||||||||||||||||   || |||||||||||| ||||||||||||||||||| |||||||||| |||||| | ||||||| ||||||||||    
T  38456 attttaattgcgattttacgagtagcgattttgctatcctacatcgattctacaaaagtccatgagtaaaatccttcga-tctgattgcaattttacgag 38358  T
Q  101 tcctgactttgctat 115  Q
    ||| || ||||||||    
T  38357 tcccgattttgctat 38343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 68; Significance: 3e-30; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 74 - 201
Target Start/End: Original strand, 24580 - 24707
Alignment:
Q  74 cttcgattttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgatttt 173  Q
    ||||||||||||||||||||||| |||||  ||||||||||||||| |||||||||||||||    |||||||||||  || |||||||||| | |||||    
T  24580 cttcgattttgattgcgattttatgagtctcgactttgctatcctacatcgattctacaaaaaaatttgagtaaaatcttttgattttgattacaatttt 24679  T
Q  174 acgagtttcgattttgctactccctttc 201  Q
    ||||||  ||||||||||||||||||||    
T  24680 acgagtcccgattttgctactccctttc 24707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 24585 - 24698
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgag 100  Q
    |||||||||||||||||| |||||  ||||||||||||||| |||||||||||||||    |||||||||||  || |||||||||| | ||||||||||    
T  24585 attttgattgcgattttatgagtctcgactttgctatcctacatcgattctacaaaaaaatttgagtaaaatcttttgattttgattacaattttacgag 24684  T
Q  101 tcctgactttgcta 114  Q
    ||| || |||||||    
T  24685 tcccgattttgcta 24698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 115 - 236
Target Start/End: Complemental strand, 56319 - 56199
Alignment:
Q  115 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaagtaa 214  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||   || |||||||||||| |||||||| || |  ||||||    
T  56319 tcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttagatgtctcgattttgctattccctttcgac-ctgaagtaa 56221  T
Q  215 agtcccgattttaataaccttg 236  Q
    |||| ||||||| | |||||||    
T  56220 agtctcgattttgacaaccttg 56199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 56319 - 56260
Alignment:
Q  37 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgatttta 96  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  56319 tcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgatttta 56260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 115 - 237
Target Start/End: Original strand, 8676 - 8797
Alignment:
Q  115 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactccctttctactcgaaagtaa 214  Q
    ||||||||||||||||| ||| | |||||||||||| |||| |||||||||||||||||||||||| |||||||| || |||||||| || |  ||||||    
T  8676 tcctatatcgattctacgaaaatacttgagtaaaatccttcaattttgattgcgattttacgagttccgattttgttattccctttcgac-ctgaagtaa 8774  T
Q  215 agtcccgattttaataaccttgg 237  Q
    |||||||||||| | ||||||||    
T  8775 agtcccgattttgagaaccttgg 8797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 8676 - 8740
Alignment:
Q  37 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagt 101  Q
    ||||||||||||||||| ||| | |||||||||||| |||| |||||||||||||||||||||||    
T  8676 tcctatatcgattctacgaaaatacttgagtaaaatccttcaattttgattgcgattttacgagt 8740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 78 - 236
Target Start/End: Complemental strand, 76239 - 76083
Alignment:
Q  78 gattttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 177  Q
    |||||| ||| ||||||||||||| | || |||||||||||| |||||||||||||||||| ||||||||||| ||||||| || ||||| |||||||||    
T  76239 gattttaatttcgattttacgagtaccgattttgctatcctacatcgattctacaaaagtctttgagtaaaatccttcgatctt-attgcaattttacga 76141  T
Q  178 gtttcgattttgctactccctttctactcgaaagtaaagtcccgattttaataaccttg 236  Q
    ||  ||  ||||||| | |||||| ||| | |||||||||||||||||| | |||||||    
T  76140 gtcccgggtttgctatttcctttcgact-ggaagtaaagtcccgattttgacaaccttg 76083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 76238 - 76137
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgag 100  Q
    ||||| ||| ||||||||||||| | || |||||||||||| |||||||||||||||||| ||||||||||| ||||||| || ||||| ||||||||||    
T  76238 attttaatttcgattttacgagtaccgattttgctatcctacatcgattctacaaaagtctttgagtaaaatccttcgatctt-attgcaattttacgag 76140  T
Q  101 tcc 103  Q
    |||    
T  76139 tcc 76137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 108 - 187
Target Start/End: Original strand, 145816 - 145895
Alignment:
Q  108 tttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattt 187  Q
    ||||||||| ||||||||||||||||||||   |||||||||| |||||||||||||||| ||||||||| |||||||||    
T  145816 tttgctatcttatatcgattctacaaaagtaagtgagtaaaatccttcgattttgattgctattttacgattttcgattt 145895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 145816 - 145885
Alignment:
Q  30 tttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    ||||||||| ||||||||||||||||||||   |||||||||| |||||||||||||||| |||||||||    
T  145816 tttgctatcttatatcgattctacaaaagtaagtgagtaaaatccttcgattttgattgctattttacga 145885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 115 - 192
Target Start/End: Complemental strand, 7349 - 7272
Alignment:
Q  115 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgcta 192  Q
    ||||||||| |||| |||||||| |||||||||||| |||||||||||||| ||||||||| ||| ||||||||||||    
T  7349 tcctatatctattcaacaaaagtacttgagtaaaatccttcgattttgattacgattttacaagtctcgattttgcta 7272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 115
Target Start/End: Complemental strand, 7349 - 7271
Alignment:
Q  37 tcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtcctgactttgctat 115  Q
    ||||||||| |||| |||||||| |||||||||||| |||||||||||||| ||||||||| ||||  || ||||||||    
T  7349 tcctatatctattcaacaaaagtacttgagtaaaatccttcgattttgattacgattttacaagtctcgattttgctat 7271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 111 - 188
Target Start/End: Original strand, 33169 - 33246
Alignment:
Q  111 gctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgatttt 188  Q
    |||||| ||||||||||||||||||||   |||||||||| |||||||||||||||||||||||| | ||||||||||    
T  33169 gctatcttatatcgattctacaaaagtaagtgagtaaaattcttcgattttgattgcgattttacaattttcgatttt 33246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 33169 - 33233
Alignment:
Q  33 gctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 97  Q
    |||||| ||||||||||||||||||||   |||||||||| ||||||||||||||||||||||||    
T  33169 gctatcttatatcgattctacaaaagtaagtgagtaaaattcttcgattttgattgcgattttac 33233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 47; Significance: 9e-18; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 142857 - 142923
Alignment:
Q  30 tttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgatttta 96  Q
    |||||||||||||||| ||||||||||| |||||||||||||| |||| ||||| ||||||||||||    
T  142857 tttgctatcctatatctattctacaaaactccttgagtaaaatccttcaattttaattgcgatttta 142923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 108 - 174
Target Start/End: Original strand, 142857 - 142923
Alignment:
Q  108 tttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgatttta 174  Q
    |||||||||||||||| ||||||||||| |||||||||||||| |||| ||||| ||||||||||||    
T  142857 tttgctatcctatatctattctacaaaactccttgagtaaaatccttcaattttaattgcgatttta 142923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 118 - 191
Target Start/End: Complemental strand, 8850 - 8777
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgct 191  Q
    |||||| |||||||||||||  ||||||||||| |||||||||||||| |||||||| || |||||||||||||    
T  8850 tatatctattctacaaaagtagttgagtaaaatccttcgattttgattacgattttatgattttcgattttgct 8777  T

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Target: scaffold0603; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 8850 - 8794
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgatttta 96  Q
    |||||| |||||||||||||  ||||||||||| |||||||||||||| ||||||||    
T  8850 tatatctattctacaaaagtagttgagtaaaatccttcgattttgattacgatttta 8794  T

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Target: scaffold1178 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold1178
Description:

Target: scaffold1178; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 173
Target Start/End: Original strand, 531 - 626
Alignment:
Q  76 tcgattttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgatttt 173  Q
    |||||||||||||||||||||||| ||  ||  | ||||||||||||| |||||||||||||||| |||||| ||   |||||||| |||||||||||    
T  531 tcgattttgattgcgattttacgattcgcga--tcgctatcctatatcaattctacaaaagtcctcgagtaacatcactcgattttaattgcgatttt 626  T

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Target: scaffold1178; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 534 - 664
Alignment:
Q  1 attttgattgcgattttacgagtcctgactttgctatcctatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgag 100  Q
    ||||||||||||||||||||| ||  ||  | ||||||||||||| |||||||||||||||| |||||| ||   |||||||| |||||||||||         
T  534 attttgattgcgattttacgattcgcga--tcgctatcctatatcaattctacaaaagtcctcgagtaacatcactcgattttaattgcgatttt----- 626  T
Q  101 tcctgactttgctatcctatatcgattctacaaaagtccttgagtaaa 148  Q
              ||||||||||||| ||||||||||||||||||||||||    
T  627 ----------gctatcctatatctattctacaaaagtccttgagtaaa 664  T

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Target: scaffold0534 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0534
Description:

Target: scaffold0534; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 126 - 200
Target Start/End: Original strand, 916 - 990
Alignment:
Q  126 ttctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgctactcccttt 200  Q
    ||||||||||||  ||||||||||| |||||||||||||||| ||||||||| |||| ||||||||  |||||||    
T  916 ttctacaaaagtagttgagtaaaattcttcgattttgattgcaattttacgattttcaattttgctcttcccttt 990  T

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Target: scaffold0534; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 99
Target Start/End: Original strand, 916 - 967
Alignment:
Q  48 ttctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    ||||||||||||  ||||||||||| |||||||||||||||| |||||||||    
T  916 ttctacaaaagtagttgagtaaaattcttcgattttgattgcaattttacga 967  T

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Target: scaffold0048 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 4)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 61205 - 61146
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 177  Q
    ||||||||||||||||||||  || |||||||| ||||||||||||||| ||||||||||    
T  61205 tatatcgattctacaaaagtagttaagtaaaattcttcgattttgattgtgattttacga 61146  T

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Target: scaffold0048; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 61205 - 61146
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    ||||||||||||||||||||  || |||||||| ||||||||||||||| ||||||||||    
T  61205 tatatcgattctacaaaagtagttaagtaaaattcttcgattttgattgtgattttacga 61146  T

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Target: scaffold0048; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 174
Target Start/End: Complemental strand, 48551 - 48497
Alignment:
Q  120 tatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgatttta 174  Q
    ||||||||||||||||||  || |||||||| ||||||||||||||| |||||||    
T  48551 tatcgattctacaaaagtagttaagtaaaatccttcgattttgattgagatttta 48497  T

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Target: scaffold0048; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 96
Target Start/End: Complemental strand, 48551 - 48497
Alignment:
Q  42 tatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgatttta 96  Q
    ||||||||||||||||||  || |||||||| ||||||||||||||| |||||||    
T  48551 tatcgattctacaaaagtagttaagtaaaatccttcgattttgattgagatttta 48497  T

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Target: scaffold0042 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 118 - 191
Target Start/End: Complemental strand, 93596 - 93522
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtt-tcgattttgct 191  Q
    ||||||||||||||||||||  |||| |||||| |||||||||||||| ||||||||| | || |||||||||||    
T  93596 tatatcgattctacaaaagtagttgaataaaatccttcgattttgattacgattttacaatttgtcgattttgct 93522  T

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Target: scaffold0042; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 97
Target Start/End: Complemental strand, 93596 - 93539
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttac 97  Q
    ||||||||||||||||||||  |||| |||||| |||||||||||||| |||||||||    
T  93596 tatatcgattctacaaaagtagttgaataaaatccttcgattttgattacgattttac 93539  T

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Target: scaffold0510 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 191
Target Start/End: Complemental strand, 94 - 22
Alignment:
Q  118 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacgagtttcgattttgct 191  Q
    ||||||||||||||||| ||  ||||||||||| ||||||||||| || ||||||||||| | |||||||||||    
T  94 tatatcgattctacaaa-gtagttgagtaaaatccttcgattttggtttcgattttacgattgtcgattttgct 22  T

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Target: scaffold0510; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 94 - 36
Alignment:
Q  40 tatatcgattctacaaaagtccttgagtaaaatacttcgattttgattgcgattttacga 99  Q
    ||||||||||||||||| ||  ||||||||||| ||||||||||| || |||||||||||    
T  94 tatatcgattctacaaa-gtagttgagtaaaatccttcgattttggtttcgattttacga 36  T

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Target: scaffold0007 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 192
Target Start/End: Complemental strand, 220474 - 220434
Alignment:
Q  152 cttcgattttgattgcgattttacgagtttcgattttgcta 192  Q
    ||||||||| |||||| ||||||||| ||||||||||||||    
T  220474 cttcgatttcgattgcaattttacgattttcgattttgcta 220434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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