View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1137_low_146 (Length: 292)

Name: NF1137_low_146
Description: NF1137
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1137_low_146
NF1137_low_146
[»] chr7 (38 HSPs)
chr7 (108-288)||(45044307-45044487)
chr7 (1-115)||(48880714-48880828)
chr7 (2-107)||(34483003-34483108)
chr7 (1-110)||(35445561-35445670)
chr7 (1-110)||(42611975-42612084)
chr7 (1-109)||(45637875-45637983)
chr7 (1-108)||(3962142-3962249)
chr7 (1-107)||(30848733-30848839)
chr7 (1-107)||(35876408-35876514)
chr7 (2-107)||(24395136-24395241)
chr7 (1-108)||(15329438-15329545)
chr7 (1-108)||(15577641-15577748)
chr7 (1-105)||(4974532-4974636)
chr7 (26-107)||(25167651-25167732)
chr7 (1-109)||(42696247-42696356)
chr7 (6-98)||(29737313-29737406)
chr7 (17-108)||(18037157-18037248)
chr7 (17-106)||(37476876-37476965)
chr7 (1-109)||(15238550-15238656)
chr7 (5-105)||(20009895-20009996)
chr7 (31-95)||(34482847-34482912)
chr7 (31-95)||(4974723-4974788)
chr7 (31-95)||(18036990-18037055)
chr7 (31-95)||(24394984-24395049)
chr7 (31-95)||(42611823-42611888)
chr7 (31-95)||(45637724-45637789)
chr7 (34-95)||(15577841-15577903)
chr7 (42-95)||(37477079-37477133)
chr7 (31-95)||(3961991-3962056)
chr7 (31-76)||(15238414-15238459)
chr7 (31-95)||(15329285-15329350)
chr7 (31-95)||(25167838-25167903)
chr7 (31-95)||(29737151-29737216)
chr7 (31-95)||(36790454-36790519)
chr7 (31-95)||(48880915-48880980)
chr7 (41-107)||(40880641-40880706)
chr7 (31-76)||(30848601-30848646)
chr7 (31-76)||(35444590-35444635)
[»] scaffold0178 (2 HSPs)
scaffold0178 (1-107)||(11785-11891)
scaffold0178 (31-95)||(11633-11698)
[»] chr5 (34 HSPs)
chr5 (1-109)||(3521800-3521908)
chr5 (1-107)||(6043307-6043413)
chr5 (1-107)||(33584124-33584230)
chr5 (2-109)||(4892367-4892474)
chr5 (1-108)||(25398402-25398509)
chr5 (1-107)||(8145537-8145643)
chr5 (1-106)||(3362943-3363048)
chr5 (4-112)||(37321583-37321691)
chr5 (1-104)||(12850966-12851069)
chr5 (1-109)||(14138831-14138939)
chr5 (1-107)||(2477800-2477906)
chr5 (1-107)||(38899520-38899627)
chr5 (1-109)||(12614530-12614639)
chr5 (1-107)||(22912852-22912956)
chr5 (1-66)||(4433844-4433909)
chr5 (1-86)||(11360947-11361032)
chr5 (17-109)||(17545475-17545567)
chr5 (31-95)||(2477648-2477713)
chr5 (31-103)||(8145379-8145452)
chr5 (31-95)||(11361119-11361184)
chr5 (31-95)||(4892214-4892279)
chr5 (31-95)||(22913042-22913107)
chr5 (31-95)||(25398250-25398315)
chr5 (36-95)||(10458409-10458469)
chr5 (31-103)||(3521994-3522067)
chr5 (31-95)||(6043499-6043564)
chr5 (31-76)||(17545673-17545718)
chr5 (31-95)||(33584317-33584382)
chr5 (1-65)||(13664723-13664787)
chr5 (31-90)||(37321781-37321841)
chr5 (31-107)||(27482017-27482095)
chr5 (31-95)||(3362790-3362855)
chr5 (31-95)||(12614721-12614786)
chr5 (31-95)||(38899714-38899779)
[»] chr4 (52 HSPs)
chr4 (1-109)||(44893006-44893114)
chr4 (1-107)||(44893590-44893696)
chr4 (1-108)||(46442008-46442115)
chr4 (1-108)||(49387681-49387788)
chr4 (1-107)||(36073513-36073619)
chr4 (1-108)||(4751611-4751718)
chr4 (1-105)||(24128403-24128507)
chr4 (1-108)||(2625001-2625108)
chr4 (1-108)||(22199423-22199530)
chr4 (1-108)||(36073115-36073222)
chr4 (1-108)||(47290230-47290337)
chr4 (1-108)||(53123195-53123302)
chr4 (1-110)||(7744904-7745013)
chr4 (1-110)||(21802112-21802221)
chr4 (1-105)||(9089034-9089138)
chr4 (1-109)||(50156372-50156479)
chr4 (1-108)||(31078613-31078720)
chr4 (1-109)||(10442580-10442689)
chr4 (1-107)||(33530479-33530585)
chr4 (1-97)||(23964269-23964365)
chr4 (1-108)||(37219795-37219903)
chr4 (1-105)||(17655594-17655699)
chr4 (1-105)||(24392840-24392942)
chr4 (1-108)||(37934735-37934843)
chr4 (1-107)||(42671832-42671939)
chr4 (10-108)||(11314045-11314144)
chr4 (1-76)||(30563373-30563448)
chr4 (31-95)||(7745100-7745165)
chr4 (31-103)||(23964453-23964526)
chr4 (31-95)||(33530676-33530741)
chr4 (41-107)||(25063369-25063436)
chr4 (31-95)||(10442777-10442842)
chr4 (31-95)||(31078807-31078872)
chr4 (31-95)||(42671681-42671746)
chr4 (31-95)||(49387876-49387941)
chr4 (31-94)||(36073731-36073795)
chr4 (31-95)||(21802310-21802375)
chr4 (31-95)||(22199273-22199338)
chr4 (31-95)||(24392679-24392744)
chr4 (31-95)||(36072959-36073024)
chr4 (15-107)||(36073256-36073349)
chr4 (15-106)||(44744610-44744698)
chr4 (31-95)||(44893438-44893503)
chr4 (31-95)||(46441856-46441921)
chr4 (31-95)||(47290078-47290143)
chr4 (31-76)||(50156566-50156611)
chr4 (31-95)||(53123042-53123108)
chr4 (31-77)||(17655461-17655507)
chr4 (31-95)||(4751458-4751523)
chr4 (31-76)||(9088902-9088947)
chr4 (31-95)||(24128251-24128316)
chr4 (31-95)||(36073362-36073427)
[»] chr2 (32 HSPs)
chr2 (1-107)||(23267857-23267963)
chr2 (1-107)||(35160923-35161029)
chr2 (1-107)||(10662052-10662158)
chr2 (1-107)||(33380371-33380477)
chr2 (1-113)||(13355012-13355124)
chr2 (1-107)||(7475303-7475409)
chr2 (1-107)||(9293370-9293476)
chr2 (1-103)||(3989240-3989342)
chr2 (1-104)||(31174633-31174736)
chr2 (1-107)||(9723570-9723677)
chr2 (17-111)||(43331092-43331186)
chr2 (1-108)||(22592874-22592984)
chr2 (1-65)||(21936246-21936310)
chr2 (3-76)||(16767288-16767361)
chr2 (1-105)||(21393483-21393584)
chr2 (31-95)||(10661899-10661964)
chr2 (31-103)||(31174822-31174895)
chr2 (31-95)||(35160769-35160834)
chr2 (62-107)||(39819272-39819317)
chr2 (17-65)||(34320994-34321042)
chr2 (17-86)||(37335824-37335894)
chr2 (31-95)||(14941354-14941419)
chr2 (3-65)||(14941201-14941263)
chr2 (31-76)||(3989108-3989153)
chr2 (31-95)||(9293564-9293629)
chr2 (31-76)||(21393676-21393721)
chr2 (31-95)||(23268050-23268115)
chr2 (31-95)||(33380219-33380284)
chr2 (31-95)||(43330924-43330989)
chr2 (31-95)||(9723417-9723482)
chr2 (31-95)||(27847644-27847709)
chr2 (32-77)||(37335744-37335789)
[»] chr8 (55 HSPs)
chr8 (1-109)||(26041906-26042014)
chr8 (1-109)||(32064910-32065018)
chr8 (1-109)||(40779922-40780030)
chr8 (1-107)||(3596836-3596942)
chr8 (1-107)||(17841645-17841751)
chr8 (1-107)||(42754837-42754943)
chr8 (1-109)||(37985849-37985957)
chr8 (2-107)||(6108028-6108133)
chr8 (1-106)||(14129023-14129128)
chr8 (1-107)||(10044512-10044618)
chr8 (1-107)||(25581034-25581140)
chr8 (13-109)||(1503636-1503732)
chr8 (1-109)||(15187724-15187832)
chr8 (1-105)||(24211169-24211273)
chr8 (1-108)||(1645758-1645865)
chr8 (1-105)||(20091598-20091702)
chr8 (1-105)||(34665545-34665649)
chr8 (1-95)||(32394021-32394114)
chr8 (1-95)||(35353205-35353299)
chr8 (1-107)||(30055680-30055786)
chr8 (1-82)||(8453997-8454078)
chr8 (1-105)||(38017096-38017201)
chr8 (1-96)||(39772608-39772703)
chr8 (19-108)||(31347570-31347659)
chr8 (1-105)||(37132477-37132582)
chr8 (1-107)||(24844655-24844762)
chr8 (27-110)||(30834847-30834931)
chr8 (1-76)||(41819594-41819669)
chr8 (1-108)||(7017652-7017757)
chr8 (1-108)||(7022145-7022250)
chr8 (31-104)||(3890412-3890486)
chr8 (31-103)||(6108221-6108294)
chr8 (31-95)||(14128876-14128941)
chr8 (31-95)||(32064757-32064822)
chr8 (31-95)||(32393870-32393935)
chr8 (31-95)||(34665394-34665459)
chr8 (31-95)||(35353053-35353118)
chr8 (31-95)||(37986043-37986108)
chr8 (31-103)||(39772789-39772862)
chr8 (31-95)||(42755030-42755095)
chr8 (31-103)||(30835035-30835107)
chr8 (31-95)||(17841838-17841903)
chr8 (31-95)||(20091789-20091854)
chr8 (31-76)||(25581227-25581272)
chr8 (31-76)||(31347770-31347815)
chr8 (31-95)||(40780117-40780182)
chr8 (31-103)||(41819766-41819839)
chr8 (40-95)||(38016983-38017039)
chr8 (38-76)||(3890611-3890649)
chr8 (31-77)||(7017853-7017899)
chr8 (31-104)||(24844847-24844920)
chr8 (42-76)||(37132657-37132691)
chr8 (31-95)||(8453846-8453911)
chr8 (31-95)||(26042104-26042169)
chr8 (31-95)||(27782105-27782170)
[»] scaffold0228 (6 HSPs)
scaffold0228 (1-108)||(26100-26207)
scaffold0228 (1-108)||(16148-16255)
scaffold0228 (31-95)||(8414-8479)
scaffold0228 (31-95)||(15996-16061)
scaffold0228 (31-95)||(25948-26013)
scaffold0228 (1-40)||(8566-8605)
[»] chr6 (33 HSPs)
chr6 (1-108)||(33696861-33696968)
chr6 (1-108)||(32702369-32702476)
chr6 (1-107)||(17175816-17175922)
chr6 (1-107)||(33695121-33695227)
chr6 (1-107)||(18365369-18365475)
chr6 (1-107)||(18370633-18370739)
chr6 (1-96)||(6031546-6031641)
chr6 (1-108)||(23290875-23290982)
chr6 (1-117)||(2309209-2309324)
chr6 (4-108)||(28675315-28675419)
chr6 (1-108)||(17705263-17705369)
chr6 (1-108)||(29693609-29693717)
chr6 (1-65)||(18889481-18889545)
chr6 (1-105)||(11548386-11548488)
chr6 (29-107)||(582522-582602)
chr6 (1-65)||(6127441-6127505)
chr6 (31-95)||(6127287-6127352)
chr6 (31-95)||(23291072-23291137)
chr6 (31-95)||(17705453-17705518)
chr6 (31-95)||(33695315-33695380)
chr6 (31-95)||(33696708-33696773)
chr6 (41-106)||(34238883-34238948)
chr6 (53-107)||(2121004-2121059)
chr6 (31-76)||(11548576-11548621)
chr6 (31-95)||(18365561-18365626)
chr6 (31-95)||(18370825-18370890)
chr6 (1-69)||(8515560-8515628)
chr6 (41-95)||(8515723-8515778)
chr6 (41-95)||(25986942-25986997)
chr6 (1-39)||(9752109-9752147)
chr6 (31-95)||(17176009-17176074)
chr6 (31-95)||(28675160-28675225)
chr6 (31-95)||(18889685-18889749)
[»] chr3 (51 HSPs)
chr3 (1-108)||(34482682-34482789)
chr3 (1-107)||(37522217-37522323)
chr3 (1-108)||(3137208-3137315)
chr3 (1-107)||(3089583-3089689)
chr3 (1-108)||(22426139-22426246)
chr3 (1-108)||(33113958-33114065)
chr3 (1-108)||(37216847-37216954)
chr3 (1-107)||(2754883-2754989)
chr3 (1-106)||(8320378-8320483)
chr3 (2-107)||(30385565-30385670)
chr3 (1-108)||(6042041-6042148)
chr3 (1-107)||(19650695-19650801)
chr3 (1-108)||(3456228-3456335)
chr3 (1-107)||(3574321-3574427)
chr3 (1-107)||(47738275-47738382)
chr3 (1-108)||(48161070-48161177)
chr3 (1-105)||(33145876-33145980)
chr3 (1-107)||(26612910-26613017)
chr3 (1-105)||(42921289-42921394)
chr3 (1-108)||(36864826-36864934)
chr3 (1-95)||(33839699-33839794)
chr3 (2-108)||(40327996-40328103)
chr3 (1-110)||(41224400-41224507)
chr3 (1-108)||(8361833-8361938)
chr3 (4-106)||(46919061-46919164)
chr3 (1-112)||(9796819-9796928)
chr3 (1-107)||(24343713-24343820)
chr3 (31-95)||(2754729-2754794)
chr3 (1-65)||(42298026-42298090)
chr3 (31-95)||(3574515-3574580)
chr3 (31-103)||(9797017-9797090)
chr3 (31-103)||(19650888-19650961)
chr3 (31-95)||(33145725-33145789)
chr3 (31-95)||(3456076-3456141)
chr3 (31-103)||(8320572-8320645)
chr3 (31-95)||(11347280-11347345)
chr3 (31-103)||(22426332-22426405)
chr3 (31-95)||(37217041-37217106)
chr3 (31-95)||(48160917-48160982)
chr3 (1-92)||(41883031-41883123)
chr3 (31-95)||(3137402-3137467)
chr3 (31-95)||(6041896-6041961)
chr3 (31-76)||(8362033-8362078)
chr3 (31-103)||(33839535-33839608)
chr3 (31-95)||(47738117-47738182)
chr3 (1-44)||(11347433-11347476)
chr3 (31-95)||(42297365-42297431)
chr3 (31-68)||(3089457-3089494)
chr3 (31-95)||(37522065-37522130)
chr3 (31-76)||(41883211-41883256)
chr3 (31-94)||(30385024-30385088)
[»] chr1 (37 HSPs)
chr1 (1-108)||(51737669-51737776)
chr1 (1-108)||(36966502-36966609)
chr1 (1-108)||(41876236-41876343)
chr1 (1-107)||(9910086-9910192)
chr1 (1-107)||(37821629-37821735)
chr1 (3-108)||(18404614-18404719)
chr1 (1-109)||(19015568-19015676)
chr1 (1-108)||(20304924-20305031)
chr1 (1-124)||(25973571-25973693)
chr1 (1-107)||(6883651-6883757)
chr1 (1-106)||(40215152-40215257)
chr1 (1-107)||(25463840-25463946)
chr1 (4-108)||(44094864-44094968)
chr1 (1-107)||(3559781-3559887)
chr1 (31-107)||(19722894-19722970)
chr1 (1-114)||(10167563-10167677)
chr1 (1-105)||(44690818-44690923)
chr1 (1-108)||(33786425-33786530)
chr1 (1-107)||(32000061-32000165)
chr1 (1-105)||(40273874-40273976)
chr1 (31-95)||(18404454-18404519)
chr1 (31-95)||(25463688-25463753)
chr1 (31-104)||(33786623-33786696)
chr1 (1-108)||(27523049-27523157)
chr1 (31-95)||(16045786-16045851)
chr1 (31-95)||(40215000-40215065)
chr1 (31-103)||(40273706-40273779)
chr1 (31-95)||(3559629-3559694)
chr1 (31-95)||(44094710-44094775)
chr1 (35-106)||(52064373-52064445)
chr1 (1-65)||(52329439-52329503)
chr1 (31-82)||(6883513-6883564)
chr1 (31-93)||(27523243-27523306)
chr1 (31-95)||(9910281-9910346)
chr1 (31-95)||(32000255-32000320)
chr1 (35-95)||(41876434-41876495)
chr1 (3-107)||(22157333-22157437)
[»] scaffold0204 (2 HSPs)
scaffold0204 (1-107)||(4560-4666)
scaffold0204 (31-95)||(4408-4473)
[»] scaffold0471 (2 HSPs)
scaffold0471 (1-105)||(13006-13110)
scaffold0471 (31-95)||(12854-12919)
[»] scaffold0085 (2 HSPs)
scaffold0085 (2-107)||(48014-48119)
scaffold0085 (31-94)||(47863-47927)
[»] scaffold0096 (2 HSPs)
scaffold0096 (1-107)||(41174-41280)
scaffold0096 (31-95)||(41023-41088)
[»] scaffold0665 (1 HSPs)
scaffold0665 (31-95)||(3080-3145)
[»] scaffold0041 (1 HSPs)
scaffold0041 (41-107)||(85577-85642)


Alignment Details
Target: chr7 (Bit Score: 156; Significance: 6e-83; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 108 - 288
Target Start/End: Original strand, 45044307 - 45044487
Alignment:
Q  108 tataatttaaaacataaaaaatgatttcttnnnnnnngtggttttatctccaaataatctttaaaacaaatgaactcttacacggttaaacattttcaac 207  Q
    ||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45044307 tataatttaaaacataaaaaatgatttcttaaaaaaagtggttttatctccaaataatctttaaaacaaatgaactcttacacggttaaacattttcaac 45044406  T
Q  208 atctctttttagataggatcaaaatggtgaccacaaatacctactatttaaaaagtgtgtaaattcttacctttgctactc 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  45044407 atctctttttagataggatcaaaatggtgaccacaaatacctactatttaaaaagtgtgtaaattcttacctttgatactc 45044487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 48880828 - 48880714
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    ||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  48880828 ttttttatgaaagattaataaatgaaactgaaatctaaatgtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagc 48880729  T
Q  101 attttcctataattt 115  Q
    |||||||||| ||||    
T  48880728 attttcctattattt 48880714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 34483003 - 34483108
Alignment:
Q  2 tttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaaca 101  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  34483003 tttttatgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaaca 34483102  T
Q  102 ttttcc 107  Q
    ||||||    
T  34483103 ttttcc 34483108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 35445561 - 35445670
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||| |    
T  35445561 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatatcattcttgaatttttcttataaaatcattcttgatatctagc 35445660  T
Q  101 attttcctat 110  Q
    ||||||||||    
T  35445661 attttcctat 35445670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 42611975 - 42612084
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| |    
T  42611975 ttttttatgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattcttagatctttcttataaaatcattcttgatatctagc 42612074  T
Q  101 attttcctat 110  Q
    ||||||||||    
T  42612075 attttcctat 42612084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 45637875 - 45637983
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||| |    
T  45637875 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttaatatctagc 45637974  T
Q  101 attttccta 109  Q
    |||||||||    
T  45637975 attttccta 45637983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 3962142 - 3962249
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||| |    
T  3962142 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatatttcttataaaatcattcttgatatctagc 3962241  T
Q  101 attttcct 108  Q
    ||||||||    
T  3962242 attttcct 3962249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 30848733 - 30848839
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| |    
T  30848733 ttttttatgaaagattaataaatgagactgaaatttaaaggtgattattgtgccatgtcattcttgaatttttcttataaaagcattcttgatatctagc 30848832  T
Q  101 attttcc 107  Q
    |||||||    
T  30848833 attttcc 30848839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 35876408 - 35876514
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||| |    
T  35876408 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcatttttagatatttcttataaaatcattcttgatatctagc 35876507  T
Q  101 attttcc 107  Q
    |||||||    
T  35876508 attttcc 35876514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 24395136 - 24395241
Alignment:
Q  2 tttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaaca 101  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||| ||    
T  24395136 tttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaatcattcttgatatctagca 24395235  T
Q  102 ttttcc 107  Q
    ||||||    
T  24395236 ttttcc 24395241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 15329438 - 15329545
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||| |    
T  15329438 ttttttatgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttgaatatttcttataaaatcattctttatatctagc 15329537  T
Q  101 attttcct 108  Q
    ||||||||    
T  15329538 attttcct 15329545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 15577748 - 15577641
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||  || |||||||||||||||||||||||||||| |    
T  15577748 ttttttataaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttggatctttcttataaaatcattcttgatatctagc 15577649  T
Q  101 attttcct 108  Q
    ||||||||    
T  15577648 attttcct 15577641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 4974636 - 4974532
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    ||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||| |    
T  4974636 ttttttatgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatcttttttataaaatcattcttgatatctagc 4974537  T
Q  101 atttt 105  Q
    |||||    
T  4974536 atttt 4974532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 25167732 - 25167651
Alignment:
Q  26 gactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaacattttcc 107  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  25167732 gactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 25167651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 42696247 - 42696356
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctaa 99  Q
    ||||||||||||  |||||||||| ||||||||||||| |||||||||||| ||||||||||||| ||||||| || ||||||||||| |||||||||||    
T  42696247 ttttttatgaaaagttaataaatgagactgaaatctaagggtgattattgtaccatgtcattcttgaattttttttgataaaatcattattgatatctaa 42696346  T
Q  100 cattttccta 109  Q
    ||||||||||    
T  42696347 cattttccta 42696356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 6 - 98
Target Start/End: Original strand, 29737313 - 29737406
Alignment:
Q  6 tatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatcta 98  Q
    |||||||| |||||||||| ||||||||||||| ||||||||||||| ||||| |||||||||| |||||| ||||||||||||||||||||||    
T  29737313 tatgaaaggttaataaatgagactgaaatctaagggtgattattgtgacatgttattcttaaatctttcttgataaaatcattcttgatatcta 29737406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 108
Target Start/End: Original strand, 18037157 - 18037248
Alignment:
Q  17 aataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaacattttcct 108  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||   |||||||| |||||||||| |||||||||    
T  18037157 aataaatgtgactgaaatctaagggtgattattgtaccatgtcattcttaaatctttcttgataaatcattgttgatatctagcattttcct 18037248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 37476965 - 37476876
Alignment:
Q  17 aataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaacattttc 106  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||| |||||| ||||||   ||||||||||||||||||| |||||||    
T  37476965 aataaatgagactgaaatctaagggtgattattgtgccatgtcattattaaatctttcttgataaatcattcttgatatctagcattttc 37476876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 15238550 - 15238656
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||   |||||||| ||||||||||||| | ||||||||||| |||||||||||||||| ||| ||   ||||||||||||||||||| |    
T  15238550 ttttttatgaaagg--aataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatattttttgataaatcattcttgatatctagc 15238647  T
Q  101 attttccta 109  Q
    |||||||||    
T  15238648 attttccta 15238656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 20009996 - 20009895
Alignment:
Q  5 ttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaat-ttttcttataaaatcattcttgatatctaacatt 103  Q
    |||| |||| |||||||||| |||| ||||||||   ||||||||||| |||||||||||| ||| |||| | |||||||||||| ||||||||| ||||    
T  20009996 ttattaaaggttaataaatgagactaaaatctaagtatgattattgtgtcatgtcattcttgaatcttttttgataaaatcattcatgatatctatcatt 20009897  T
Q  104 tt 105  Q
    ||    
T  20009896 tt 20009895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 34482912 - 34482847
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  34482912 aaatctaagggtgattattctgccatgtcattcttaaaattttcttaataaaatctttcttgatat 34482847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 4974723 - 4974788
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||| ||||||||||    
T  4974723 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 4974788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 18037055 - 18036990
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||| ||| |||||||||| |||||||||||||||||||||||||| | |||||| ||||||||||    
T  18037055 aaatttaagggtgattattctgccatgtcattcttaaatttttcttgaaaaaatctttcttgatat 18036990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 24395049 - 24394984
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    ||||||||||||  ||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  24395049 aaatctaaaggttgttattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 24394984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 42611888 - 42611823
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||| ||||||||||    
T  42611888 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 42611823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 45637789 - 45637724
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||| ||||||||||    
T  45637789 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 45637724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 15577841 - 15577903
Alignment:
Q  34 tctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    ||||| |||||||||| ||||||||||||||| || ||||||| |||||||| ||||||||||    
T  15577841 tctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 15577903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 95
Target Start/End: Original strand, 37477079 - 37477133
Alignment:
Q  42 tgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||||||||||||||||||| | |||||| ||||||||||    
T  37477079 tgattattctgccatgtcattcttaaatttttcttgagaaaatctttcttgatat 37477133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 3962056 - 3961991
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||| ||| |||||||||| || ||||||||||||||| ||||||| |||||||| ||||||||||    
T  3962056 aaatttaagggtgattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatat 3961991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 15238459 - 15238414
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt 76  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||||    
T  15238459 aaatctaatggtgattattctgccatgtcattcttgaatttttctt 15238414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 15329350 - 15329285
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| || |||||||||||| || ||||||| |||||||| ||||||||||    
T  15329350 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 15329285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 25167838 - 25167903
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| | |||||||| |||||||||||||||||| ||||||| | |||||| ||||||||||    
T  25167838 aaatctaaggatgattattctgccatgtcattcttaaaattttcttaaaaaaatctttcttgatat 25167903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 29737216 - 29737151
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| | |||||||||||||||| ||||||| | |||||| ||||||||||    
T  29737216 aaatctaagggtgattattctaccatgtcattcttaaaattttcttaaaaaaatctttcttgatat 29737151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 36790454 - 36790519
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||| ||| ||| |||||| |||||||||||||||||||||||||| |||||| | ||||||||||    
T  36790454 aaatttaagggtaattattctgccatgtcattcttaaatttttcttgataaaaactttcttgatat 36790519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 48880915 - 48880980
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| || |||||||||||| || ||||||| |||||||| ||||||||||    
T  48880915 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 48880980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 40880706 - 40880641
Alignment:
Q  41 gtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaacattttcc 107  Q
    |||||||||||||||||| ||| || ||| ||||  || ||||||||||||||||||| ||||||||    
T  40880706 gtgattattgtgccatgttattttttaatctttca-atcaaatcattcttgatatctagcattttcc 40880641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 30848646 - 30848601
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt 76  Q
    |||||||| | |||||||| |||||||||||||||||| |||||||    
T  30848646 aaatctaaggatgattattctgccatgtcattcttaaaattttctt 30848601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 35444635 - 35444590
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt 76  Q
    |||||||| |||||||||| ||||||||||||||| || |||||||    
T  35444635 aaatctaagggtgattattctgccatgtcattcttgaaattttctt 35444590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 103; Significance: 3e-51; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 11785 - 11891
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11785 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 11884  T
Q  101 attttcc 107  Q
    |||||||    
T  11885 attttcc 11891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 11698 - 11633
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| || |||||||||||| || ||||||| |||||||| ||||||||||    
T  11698 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 11633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 101; Significance: 4e-50; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 3521908 - 3521800
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  3521908 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagc 3521809  T
Q  101 attttccta 109  Q
    |||||||||    
T  3521808 attttccta 3521800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 6043413 - 6043307
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  6043413 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagc 6043314  T
Q  101 attttcc 107  Q
    |||||||    
T  6043313 attttcc 6043307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 33584230 - 33584124
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  33584230 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagc 33584131  T
Q  101 attttcc 107  Q
    |||||||    
T  33584130 attttcc 33584124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 4892367 - 4892474
Alignment:
Q  2 tttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaaca 101  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  4892367 ttttaatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagca 4892466  T
Q  102 ttttccta 109  Q
    ||||||||    
T  4892467 ttttccta 4892474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 25398402 - 25398509
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |    
T  25398402 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattgttgaatttttcttataaaatcattcttgatatctagc 25398501  T
Q  101 attttcct 108  Q
    ||||||||    
T  25398502 attttcct 25398509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 8145537 - 8145643
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |    
T  8145537 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagc 8145636  T
Q  101 attttcc 107  Q
    |||||||    
T  8145637 attttcc 8145643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 3362943 - 3363048
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |    
T  3362943 ttttttatgaaagattaataaatgagactgaaatctaaaggtggttattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagc 3363042  T
Q  101 attttc 106  Q
    ||||||    
T  3363043 attttc 3363048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 37321691 - 37321583
Alignment:
Q  4 tttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaacatt 103  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||| ||||    
T  37321691 tttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatttcattcttgaatatttcttataaaatcattcttgatatctagcatt 37321592  T
Q  104 ttcctataa 112  Q
    |||||||||    
T  37321591 ttcctataa 37321583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 12850966 - 12851069
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  12850966 ttttttatgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagc 12851065  T
Q  101 attt 104  Q
    ||||    
T  12851066 attt 12851069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 14138831 - 14138939
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||| |    
T  14138831 ttttttatgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttaatatctagc 14138930  T
Q  101 attttccta 109  Q
    |||||||||    
T  14138931 attttccta 14138939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 2477800 - 2477906
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||| |    
T  2477800 ttttttatgaaagattaataaataagactgaaatctaaaggtgatcattgtgccatgtcattcttagatctttcttataaaatcattcttgatatctagc 2477899  T
Q  101 attttcc 107  Q
    |||||||    
T  2477900 attttcc 2477906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 38899627 - 38899520
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattctt-aaatttttcttataaaatcattcttgatatctaa 99  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| || ||||| ||||||||||||||||||||||||     
T  38899627 ttttttatgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttttttataaaatcattcttgatatctag 38899528  T
Q  100 cattttcc 107  Q
    ||||||||    
T  38899527 cattttcc 38899520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 12614639 - 12614530
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaat-ttttcttataaaatcattcttgatatctaa 99  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||| |||||||||||     
T  12614639 ttttttatgaaaggttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatcttttttgataaaatcatacttgatatctag 12614540  T
Q  100 cattttccta 109  Q
    ||||||||||    
T  12614539 cattttccta 12614530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 22912956 - 22912852
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||| |||  |||||||| ||||||||||||| |||||||||||||||||||||||||| ||| ||||||   ||||||||||||||||||| |    
T  22912956 ttttttatgagaga--aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagc 22912859  T
Q  101 attttcc 107  Q
    |||||||    
T  22912858 attttcc 22912852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 4433909 - 4433844
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattctta 66  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  4433909 ttttttatgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattctta 4433844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 11361032 - 11360947
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcat 86  Q
    |||| ||||||||||||||||||  || |||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||    
T  11361032 ttttgtatgaaagattaataaattagattgaaatctaaagatgattattgtgccatgtcattcttgaatctttcttataaaatcat 11360947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 17545567 - 17545475
Alignment:
Q  17 aataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaacattttccta 109  Q
    |||||||| ||||||||||||| | ||||||||||| |||||||||||||||| ||| ||   ||||||||||||||||||| ||||||||||    
T  17545567 aataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatattttttgataaatcattcttgatatctagcattttccta 17545475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 2477713 - 2477648
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  2477713 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 2477648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 31 - 103
Target Start/End: Complemental strand, 8145452 - 8145379
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctaacatt 103  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  8145452 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacatt 8145379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 11361119 - 11361184
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  11361119 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 11361184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 4892279 - 4892214
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| | |||||| ||||||||||    
T  4892279 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatat 4892214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 22913042 - 22913107
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| ||||||||||||||| |||||||||| | |||||| ||||||||||    
T  22913042 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgaaaaaatctttcttgatat 22913107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 25398315 - 25398250
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| | |||||| ||||||||||    
T  25398315 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatat 25398250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 95
Target Start/End: Complemental strand, 10458469 - 10458409
Alignment:
Q  36 taaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||||||||| ||||||||||||||| |||||||||| |||||||  ||||||||||    
T  10458469 taaaggtgattattttgccatgtcattcttgaatttttcttgataaaatttttcttgatat 10458409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 103
Target Start/End: Original strand, 3521994 - 3522067
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctaacatt 103  Q
    |||||||| |||||||||| |||||||||||| || || ||||||| | |||||| |||||||||| |||||||    
T  3521994 aaatctaatggtgattattctgccatgtcatttttgaaattttcttgaaaaaatctttcttgatatataacatt 3522067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 6043499 - 6043564
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| | ||||||||||||| || ||||||| |||||||| ||||||||||    
T  6043499 aaatctaagggtgattattcttccatgtcattcttgaaattttcttgataaaatctttcttgatat 6043564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 76
Target Start/End: Original strand, 17545673 - 17545718
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt 76  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||||    
T  17545673 aaatctaatggtgattattctgccatgtcattcttgaatttttctt 17545718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 33584317 - 33584382
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||| ||| |||||||||| |||||||||||||||||| ||||||| | |||||| ||||||||||    
T  33584317 aaatttaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatat 33584382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 13664723 - 13664787
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattctt 65  Q
    |||||||| ||| ||||||||||  ||||||||||||| |||||||||| |  ||||||||||||    
T  13664723 ttttttataaaacattaataaataagactgaaatctaagggtgattattctatcatgtcattctt 13664787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 37321781 - 37321841
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattctt 90  Q
    |||| ||| |||||||||| |||||||||||||||||| ||||||| |||||||| |||||    
T  37321781 aaatttaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttctt 37321841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 107
Target Start/End: Original strand, 27482017 - 27482095
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaat-ttttcttataaaatcattc-ttgatatctaacattttcc 107  Q
    ||||||||||||||||||| ||  ||||||||||| ||| |||| | |||||||||||| || |||||||| |||||||    
T  27482017 aaatctaaaggtgattattctgttatgtcattcttgaatcttttttgataaaatcattctttaatatctaatattttcc 27482095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 3362855 - 3362790
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||| ||||| |||||||||||||||  | ||||||| |||||||| ||||||||||    
T  3362855 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatat 3362790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 12614721 - 12614786
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| || |||||||||||| ||| |||||| |||||||  ||||||||||    
T  12614721 aaatctaagggtgattattatgtcatgtcattcttgaatctttcttgataaaatatttcttgatat 12614786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 38899714 - 38899779
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||| ||||| |||||||||||||||  | ||||||| |||||||| ||||||||||    
T  38899714 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatat 38899779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 101; Significance: 4e-50; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 44893114 - 44893006
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  44893114 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagc 44893015  T
Q  101 attttccta 109  Q
    |||||||||    
T  44893014 attttccta 44893006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 44893590 - 44893696
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  44893590 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagc 44893689  T
Q  101 attttcc 107  Q
    |||||||    
T  44893690 attttcc 44893696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 46442008 - 46442115
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  46442008 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagc 46442107  T
Q  101 attttcct 108  Q
    ||||||||    
T  46442108 attttcct 46442115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 49387788 - 49387681
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  49387788 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcatccttgatatctaac 49387689  T
Q  101 attttcct 108  Q
    ||||||||    
T  49387688 attttcct 49387681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 36073513 - 36073619
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  36073513 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagc 36073612  T
Q  101 attttcc 107  Q
    |||||||    
T  36073613 attttcc 36073619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 4751611 - 4751718
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |    
T  4751611 ttttttatgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttaaatttttcttataaaattattcttgatatctagc 4751710  T
Q  101 attttcct 108  Q
    ||||||||    
T  4751711 attttcct 4751718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 24128403 - 24128507
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |    
T  24128403 ttttttatgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagc 24128502  T
Q  101 atttt 105  Q
    |||||    
T  24128503 atttt 24128507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 2625001 - 2625108
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| || ||| ||||||||||||||||||||||||||||||    
T  2625001 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcatttttgaatctttcttataaaatcattcttgatatctaac 2625100  T
Q  101 attttcct 108  Q
    ||||||||    
T  2625101 attttcct 2625108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 22199423 - 22199530
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||| |    
T  22199423 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagc 22199522  T
Q  101 attttcct 108  Q
    ||||||||    
T  22199523 attttcct 22199530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 36073115 - 36073222
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |    
T  36073115 ttttttatgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttcttataaaatcatttttgatatctagc 36073214  T
Q  101 attttcct 108  Q
    ||||||||    
T  36073215 attttcct 36073222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 47290230 - 47290337
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |    
T  47290230 ttttttatgaaagaataataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatttttcttataaaatcattcttgatatctagc 47290329  T
Q  101 attttcct 108  Q
    ||||||||    
T  47290330 attttcct 47290337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 53123195 - 53123302
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  53123195 ttttgtatgaaagattaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagc 53123294  T
Q  101 attttcct 108  Q
    ||||||||    
T  53123295 attttcct 53123302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 7745013 - 7744904
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||| ||||||||||| || ||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||    
T  7745013 ttttttatgaaatattaataaatgagattgaaatctaaaggtgattattgtgcaatgtcattcttgaatctttcttataaaatcattcttgatatctaac 7744914  T
Q  101 attttcctat 110  Q
    ||||||||||    
T  7744913 attttcctat 7744904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 21802221 - 21802112
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||| |    
T  21802221 ttttttatgaaagattaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagc 21802122  T
Q  101 attttcctat 110  Q
    ||||||||||    
T  21802121 attttcctat 21802112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 9089034 - 9089138
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  9089034 ttttgtatgaaagattaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagc 9089133  T
Q  101 atttt 105  Q
    |||||    
T  9089134 atttt 9089138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 50156479 - 50156372
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||    
T  50156479 ttttttatgaaagattaataaatgagactgaaatctaa-ggtgattattatgtcatgtcattcttgaatttttcttataaaatcattcttgatatctaac 50156381  T
Q  101 attttccta 109  Q
    |||||||||    
T  50156380 attttccta 50156372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 31078720 - 31078613
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |    
T  31078720 ttttttatgaaagattaataaatgagattgaaatctaaagatgattattgtgccatgtcattcttgaattttttttataaaatcattcttgatatctagc 31078621  T
Q  101 attttcct 108  Q
    ||||||||    
T  31078620 attttcct 31078613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 10442689 - 10442580
Alignment:
Q  1 ttttttatgaaagattaa-taaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaa 99  Q
    |||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||     
T  10442689 ttttttttgaaagattaaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctag 10442590  T
Q  100 cattttccta 109  Q
    ||||||||||    
T  10442589 cattttccta 10442580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 33530585 - 33530479
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||  || ||| |||||||||||||||||||||||| |    
T  33530585 ttttttatgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattcttggatcttttttataaaatcattcttgatatctagc 33530486  T
Q  101 attttcc 107  Q
    |||||||    
T  33530485 attttcc 33530479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 23964365 - 23964269
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatct 97  Q
    |||||||||||||||||||||||| || |||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  23964365 ttttttatgaaagattaataaatgagattgaaatctaaagatgattattatgccatgtcattcttaaatctttcttataaaatcattcttgatatct 23964269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 37219795 - 37219903
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctaa 99  Q
    ||||||||||||| |||||||||  || |||||||||| | |||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  37219795 ttttttatgaaaggttaataaataagattgaaatctaaggatgattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctaa 37219894  T
Q  100 cattttcct 108  Q
    |||||||||    
T  37219895 cattttcct 37219903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 17655594 - 17655699
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctaa 99  Q
    ||||||||||||| |||||||||| ||||||||||||||||| |||||| || |||||||||||||||| |||||| |||||||||||||| |||||||     
T  17655594 ttttttatgaaaggttaataaatgagactgaaatctaaaggtaattattatgtcatgtcattcttaaatctttcttgataaaatcattcttaatatctag 17655693  T
Q  100 catttt 105  Q
    ||||||    
T  17655694 catttt 17655699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 24392840 - 24392942
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||   |||||||| ||||||||||||| | |||||||||||| ||||||||||||||| ||||||   ||||||||||||||||||| |    
T  24392840 ttttttatgaaagg--aataaatgagactgaaatctaaggatgattattgtgctatgtcattcttaaatatttcttgataaatcattcttgatatctagc 24392937  T
Q  101 atttt 105  Q
    |||||    
T  24392938 atttt 24392942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 37934843 - 37934735
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctaa 99  Q
    ||||||||||||| |||||||||| || |||||||||| ||||||||||||| ||| ||||| || ||| |||||| ||||||||| || | ||||||||    
T  37934843 ttttttatgaaaggttaataaatgagattgaaatctaagggtgattattgtgtcatatcattattgaatctttcttaataaaatcagtcataatatctaa 37934744  T
Q  100 cattttcct 108  Q
    |||||||||    
T  37934743 cattttcct 37934735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 42671832 - 42671939
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctaa 99  Q
    ||||||| ||||| |||| ||||| |||| ||||||||   |||||||| || |||||||||||| ||| |||||| |||||||||||||||||||||||    
T  42671832 ttttttacgaaaggttaacaaatgagactcaaatctaagaatgattattatgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctaa 42671931  T
Q  100 cattttcc 107  Q
    ||||||||    
T  42671932 cattttcc 42671939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 108
Target Start/End: Complemental strand, 11314144 - 11314045
Alignment:
Q  10 aaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctaacattttcct 108  Q
    |||| |||||||||  ||||  ||||||| ||||||||||||| ||||||||||||  || |||||| |||||||||||||||||||||| |||||||||    
T  11314144 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttgatatctagcattttcct 11314045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 30563373 - 30563448
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttctt 76  Q
    ||||||||||||| |||||||||  |||||||||||||  |||||||||||| |||||||||||| ||| ||||||    
T  30563373 ttttttatgaaaggttaataaataagactgaaatctaagtgtgattattgtgtcatgtcattcttgaatctttctt 30563448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 7745100 - 7745165
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  7745100 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 7745165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 31 - 103
Target Start/End: Original strand, 23964453 - 23964526
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattctt-aaatttttcttataaaatcattcttgatatctaacatt 103  Q
    |||||||| |||||||||| ||||||||||||||| |||||||| | |||||||| |||||||||| |||||||    
T  23964453 aaatctaagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatataacatt 23964526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 33530676 - 33530741
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| ||||||||||||||| |||||||||| |||||||| ||||||||||    
T  33530676 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgataaaatctttcttgatat 33530741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 25063436 - 25063369
Alignment:
Q  41 gtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctaacattttcc 107  Q
    ||||||||| | ||||||||||||| ||| |||||| |||||||||||||||||||||| ||||||||    
T  25063436 gtgattattctaccatgtcattcttgaatctttcttgataaaatcattcttgatatctagcattttcc 25063369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 10442777 - 10442842
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||| ||||||||||    
T  10442777 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 10442842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 31078807 - 31078872
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||| ||||||||||    
T  31078807 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 31078872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 42671746 - 42671681
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| ||||||||||||||||||||||| || |||||||| || |||||||    
T  42671746 aaatctaagggtgattattctgccatgtcattcttaaattttttttgataaaatctttattgatat 42671681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 49387876 - 49387941
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||| ||||||||||    
T  49387876 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 49387941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 31 - 94
Target Start/End: Original strand, 36073731 - 36073795
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgata 94  Q
    ||||||||| ||||||||| || |||||||||||||||| |||||| |||||||| |||||||||    
T  36073731 aaatctaaaagtgattattttgtcatgtcattcttaaatctttcttcataaaatctttcttgata 36073795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 21802310 - 21802375
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||  ||||||||||    
T  21802310 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatat 21802375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 22199338 - 22199273
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| | |||||||| ||||||||||||||| || ||||||| |||||||| ||||||||||    
T  22199338 aaatctaaggctgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 22199273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 24392744 - 24392679
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||| ||| |||||||||| ||||||||||||||| |||||||||| | |||||| ||||||||||    
T  24392744 aaatttaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatat 24392679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 36073024 - 36072959
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||| ||||| ||||||||||||||| || ||||||| |||||||| ||||||||||    
T  36073024 aaatctaagggtggttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 36072959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 107
Target Start/End: Complemental strand, 36073349 - 36073256
Alignment:
Q  15 ttaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctaacattttcc 107  Q
    |||||||||  |||||||||||||  || |||||| || ||| |||||||||||| |||||| ||||||||||| ||  |||||| ||||||||    
T  36073349 ttaataaataagactgaaatctaagagtaattattctggcatatcattcttaaatctttcttgataaaatcatttttagtatctagcattttcc 36073256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 106
Target Start/End: Original strand, 44744610 - 44744698
Alignment:
Q  15 ttaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaacattttc 106  Q
    |||||||||  ||||||||||||| | | ||||||| | |||||||||||| ||| ||    ||||||||||| ||||||||||||||||||    
T  44744610 ttaataaataagactgaaatctaaggataattattgagtcatgtcattcttgaatcttg---ataaaatcatttttgatatctaacattttc 44744698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 44893503 - 44893438
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattctt-aaatttttcttataaaatcattcttgatat 95  Q
    |||||||| |||||||||| ||||||||||||||| |||||||| | | |||||| ||||||||||    
T  44893503 aaatctaagggtgattattctgccatgtcattcttgaaatttttttgaaaaaatctttcttgatat 44893438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 46441921 - 46441856
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| | |||||| ||||||||||    
T  46441921 aaatctaagggtgattattttgccatgtcattcttgaaattttcttaaaaaaatctttcttgatat 46441856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 47290143 - 47290078
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| | |||||| ||||||||||    
T  47290143 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 47290078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 76
Target Start/End: Original strand, 50156566 - 50156611
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt 76  Q
    |||||||| |||||||||| |||||||||||||||||| |||||||    
T  50156566 aaatctaagggtgattattctgccatgtcattcttaaaattttctt 50156611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 53123108 - 53123042
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt--ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| ||||||||||||||| || |||||||  | |||||| ||||||||||    
T  53123108 aaatctaagggtgattattctgccatgtcattcttgaaattttctttgaaaaaatctttcttgatat 53123042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 17655507 - 17655461
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctta 77  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||||    
T  17655507 aaatctaagggtgattattctgccatgtcattcttgaaattttctta 17655461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 4751523 - 4751458
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||| ||||| |||||||||||||||  | ||||||| |||||||| ||||||||||    
T  4751523 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatat 4751458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 9088947 - 9088902
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt 76  Q
    |||||||| |||||||||| ||||||||||||||| || |||||||    
T  9088947 aaatctaagggtgattattctgccatgtcattcttgaaattttctt 9088902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 24128316 - 24128251
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| | |||||||| ||||||||||||||| || ||||||| | |||||| ||||||||||    
T  24128316 aaatctaaggatgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 24128251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 36073427 - 36073362
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||| ||| |||||||||| ||||||||||||||| || ||||||| | |||||| ||||||||||    
T  36073427 aaatttaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 36073362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 99; Significance: 7e-49; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 23267963 - 23267857
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  23267963 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagc 23267864  T
Q  101 attttcc 107  Q
    |||||||    
T  23267863 attttcc 23267857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 35160923 - 35161029
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  35160923 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagc 35161022  T
Q  101 attttcc 107  Q
    |||||||    
T  35161023 attttcc 35161029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 10662052 - 10662158
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |    
T  10662052 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagc 10662151  T
Q  101 attttcc 107  Q
    |||||||    
T  10662152 attttcc 10662158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 33380371 - 33380477
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  33380371 tttttaatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagc 33380470  T
Q  101 attttcc 107  Q
    |||||||    
T  33380471 attttcc 33380477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 13355012 - 13355124
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||  || |||||||||||||||||||||||||||| |    
T  13355012 ttttttatgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagc 13355111  T
Q  101 attttcctataat 113  Q
    |||||||| ||||    
T  13355112 attttcctttaat 13355124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 7475409 - 7475303
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| || ||| |||||||| |||||||||||||||||||||||||||||||| |    
T  7475409 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattatgtcatatcattcttgaatttttcttataaaatcattcttgatatctagc 7475310  T
Q  101 attttcc 107  Q
    |||||||    
T  7475309 attttcc 7475303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 9293476 - 9293370
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||| |    
T  9293476 ttttttatgaaagattaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagc 9293377  T
Q  101 attttcc 107  Q
    |||||||    
T  9293376 attttcc 9293370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 3989240 - 3989342
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||  || |||||||||||||||||||||||||||| |    
T  3989240 ttttttatgaaagattaataaatgagactgaaatctaaaggttattattgtgtcatgtcattcttggatctttcttataaaatcattcttgatatctagc 3989339  T
Q  101 att 103  Q
    |||    
T  3989340 att 3989342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 31174736 - 31174633
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| || ||||||||||||| | |||||||| |||||||||||| ||| |||||||||||||||||||||||||||| |    
T  31174736 ttttttatgaaagattaataaatgagattgaaatctaaaggagtttattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagc 31174637  T
Q  101 attt 104  Q
    ||||    
T  31174636 attt 31174633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 9723570 - 9723677
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctaa 99  Q
    ||||||||||||  | |||||||  |||||||||||||||||||||||| || |||||||||||||||| |||||| || ||||||||||||||||||||    
T  9723570 ttttttatgaaaagtgaataaataagactgaaatctaaaggtgattattctgtcatgtcattcttaaatatttcttgatcaaatcattcttgatatctaa 9723669  T
Q  100 cattttcc 107  Q
    ||||||||    
T  9723670 cattttcc 9723677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 111
Target Start/End: Original strand, 43331092 - 43331186
Alignment:
Q  17 aataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaacattttcctata 111  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||||| ||| ||||||   ||||||||||||||||||| ||||||||||||    
T  43331092 aataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcctata 43331186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 22592874 - 22592984
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaa--tctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatct 97  Q
    ||||||||||||| |||||||||  ||||||||  ||||| ||||||||||||| |||||||||||| ||| |||||| |||||||||||||||||||||    
T  22592874 ttttttatgaaaggttaataaataagactgaaaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatct 22592973  T
Q  98 aacattttcct 108  Q
    | |||||||||    
T  22592974 agcattttcct 22592984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 21936246 - 21936310
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattctt 65  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  21936246 ttttttatgaaagattaataaatgaaactgaaatctaaaggtgattattgtgccatgtcattctt 21936310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 76
Target Start/End: Complemental strand, 16767361 - 16767288
Alignment:
Q  3 ttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttctt 76  Q
    ||||||||||| |||||||||| |||||||||||||  |||||||||||| |||||||||||| ||| ||||||    
T  16767361 ttttatgaaaggttaataaatgagactgaaatctaagagtgattattgtgtcatgtcattcttgaatctttctt 16767288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 21393584 - 21393483
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||   |||||||| ||||||||| ||| ||||||||||||| |||||||||||| || |||||||   ||||||||||||||||||| |    
T  21393584 ttttttatgaaagg--aataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaa-ttttcttgataaatcattcttgatatctagc 21393488  T
Q  101 atttt 105  Q
    |||||    
T  21393487 atttt 21393483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 10661964 - 10661899
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  10661964 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 10661899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 31 - 103
Target Start/End: Original strand, 31174822 - 31174895
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctaacatt 103  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  31174822 aaatctaagggtgattattctgccatgtcattcttgaaattttcttaataaaatctttcttgatatataacatt 31174895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 35160834 - 35160769
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  35160834 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 35160769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 62 - 107
Target Start/End: Original strand, 39819272 - 39819317
Alignment:
Q  62 tcttaaatttttcttataaaatcattcttgatatctaacattttcc 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  39819272 tcttgaatttttcttataaaatcattcttgatatctaacattttcc 39819317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 34321042 - 34320994
Alignment:
Q  17 aataaatgtgactgaaatctaaaggtgattattgtgccatgtcattctt 65  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  34321042 aataaatgagactgaaatctaagggtgattattgtgccatgtcattctt 34320994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 37335824 - 37335894
Alignment:
Q  17 aataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcat 86  Q
    |||||||| ||||||||||||| |||||||| |||| ||||||||| |||||| |||||| ||||||||||    
T  37335824 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattattaaatctttcttgataaaatcat 37335894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 14941354 - 14941419
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| ||||||||||||||| ||| |||||| |||||||| ||||||||||    
T  14941354 aaatctaagggtgattattctgccatgtcattcttgaatctttcttaataaaatctttcttgatat 14941419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 14941263 - 14941201
Alignment:
Q  3 ttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattctt 65  Q
    ||||||||||| |||||||||  || |||||||||| | ||||||||||| ||||||||||||    
T  14941263 ttttatgaaaggttaataaataagattgaaatctaaggatgattattgtgtcatgtcattctt 14941201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 3989153 - 3989108
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt 76  Q
    |||||||| |||||||||| |||||||||||||||||| |||||||    
T  3989153 aaatctaagggtgattattctgccatgtcattcttaaaattttctt 3989108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 9293564 - 9293629
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| ||||||||||||||| ||  |||||| |||||||| ||||||||||    
T  9293564 aaatctaagggtgattattctgccatgtcattcttgaaaatttcttgataaaatctttcttgatat 9293629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 76
Target Start/End: Original strand, 21393676 - 21393721
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt 76  Q
    |||||||| |||||||||| | ||||||||||||||||||||||||    
T  21393676 aaatctaagggtgattattctaccatgtcattcttaaatttttctt 21393721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 23268050 - 23268115
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| | |||||| ||||||||||    
T  23268050 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 23268115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 33380284 - 33380219
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| ||||||||||  ||||||||||||||||| ||||||| | |||||| ||||||||||    
T  33380284 aaatctaagggtgattattcagccatgtcattcttaaaattttcttgaaaaaatctttcttgatat 33380219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 43330989 - 43330924
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| ||||||||||||||| ||||||| || | |||||| ||||||||||    
T  43330989 aaatctaagggtgattattctgccatgtcattcttgaattttttttgagaaaatctttcttgatat 43330924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 9723482 - 9723417
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||| ||| |||||||||| || |||||||||||||||| |||||| |||||||| ||||| ||||    
T  9723482 aaatttaagggtgattattctgtcatgtcattcttaaatctttcttaataaaatctttcttaatat 9723417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 27847709 - 27847644
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| || |||||||||||| ||| |||||| |||||||| ||||| ||||    
T  27847709 aaatctaacggtgattattctgtcatgtcattcttgaatctttcttaataaaatctttctttatat 27847644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 37335789 - 37335744
Alignment:
Q  32 aatctaaaggtgattattgtgccatgtcattcttaaatttttctta 77  Q
    |||||||| ||||||||| ||||||||||||||| ||| |||||||    
T  37335789 aatctaaaagtgattattctgccatgtcattcttgaatctttctta 37335744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 97; Significance: 1e-47; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 26042014 - 26041906
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  26042014 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagc 26041915  T
Q  101 attttccta 109  Q
    |||||||||    
T  26041914 attttccta 26041906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 32064910 - 32065018
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |    
T  32064910 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagc 32065009  T
Q  101 attttccta 109  Q
    |||||||||    
T  32065010 attttccta 32065018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 40780030 - 40779922
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  40780030 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagc 40779931  T
Q  101 attttccta 109  Q
    |||||||||    
T  40779930 attttccta 40779922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 3596942 - 3596836
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |    
T  3596942 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatatcattcttaaatttttcttataaaatcattcttgatatctagc 3596843  T
Q  101 attttcc 107  Q
    |||||||    
T  3596842 attttcc 3596836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 17841751 - 17841645
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  17841751 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagc 17841652  T
Q  101 attttcc 107  Q
    |||||||    
T  17841651 attttcc 17841645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 42754943 - 42754837
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  42754943 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttaaatttttcttataaaatcattcttgatatctagc 42754844  T
Q  101 attttcc 107  Q
    |||||||    
T  42754843 attttcc 42754837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 37985957 - 37985849
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |    
T  37985957 ttttttatgaaagattaataaatgggactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagc 37985858  T
Q  101 attttccta 109  Q
    |||||||||    
T  37985857 attttccta 37985849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 6108133 - 6108028
Alignment:
Q  2 tttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaaca 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||    
T  6108133 tttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagca 6108034  T
Q  102 ttttcc 107  Q
    ||||||    
T  6108033 ttttcc 6108028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 14129023 - 14129128
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |    
T  14129023 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatatttcttataaaatcattcttgatatctagc 14129122  T
Q  101 attttc 106  Q
    ||||||    
T  14129123 attttc 14129128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 10044512 - 10044618
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |    
T  10044512 ttttttatgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagc 10044611  T
Q  101 attttcc 107  Q
    |||||||    
T  10044612 attttcc 10044618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 25581140 - 25581034
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||| |    
T  25581140 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagc 25581041  T
Q  101 attttcc 107  Q
    |||||||    
T  25581040 attttcc 25581034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 109
Target Start/End: Complemental strand, 1503732 - 1503636
Alignment:
Q  13 gattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaacattttccta 109  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  1503732 gattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccta 1503636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 15187724 - 15187832
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||  || |||||||||||||||||||||||||||| |    
T  15187724 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttcttataaaatcattcttgatatctagc 15187823  T
Q  101 attttccta 109  Q
    |||||||||    
T  15187824 attttccta 15187832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 24211273 - 24211169
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||| |    
T  24211273 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagc 24211174  T
Q  101 atttt 105  Q
    |||||    
T  24211173 atttt 24211169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 1645865 - 1645758
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||   | |||||||||||||||||||||||||||| |    
T  1645865 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggttctttcttataaaatcattcttgatatctagc 1645766  T
Q  101 attttcct 108  Q
    ||||||||    
T  1645765 attttcct 1645758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 20091702 - 20091598
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    ||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |    
T  20091702 ttttttatgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagc 20091603  T
Q  101 atttt 105  Q
    |||||    
T  20091602 atttt 20091598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 34665545 - 34665649
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    ||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |    
T  34665545 ttttttatgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagc 34665644  T
Q  101 atttt 105  Q
    |||||    
T  34665645 atttt 34665649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 32394021 - 32394114
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatat 95  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||    
T  32394021 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtg-catgtcattcttaaatattttttataaaatcattcttgatat 32394114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 35353205 - 35353299
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatat 95  Q
    |||||||||||||||||||||||| || | |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  35353205 ttttttatgaaagattaataaatgagattaaaatttaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatat 35353299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 30055680 - 30055786
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    ||||||||||||| |||||||||| |||| |||||||| ||||||||||||| |||||||||||| ||| |||||||||||||||||||| ||||||| |    
T  30055680 ttttttatgaaaggttaataaatgagactaaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagc 30055779  T
Q  101 attttcc 107  Q
    |||||||    
T  30055780 attttcc 30055786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 8453997 - 8454078
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaa 82  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  8453997 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaattcttcttataaaa 8454078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 38017096 - 38017201
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtga-ttattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaa 99  Q
    |||||| ||||||||||||||||| ||||||||||||||||| | |||||||| |||||||||||| ||| ||||||||||||||||||||||||||||     
T  38017096 ttttttttgaaagattaataaatgagactgaaatctaaaggtaaattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctag 38017195  T
Q  100 catttt 105  Q
    ||||||    
T  38017196 catttt 38017201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 39772703 - 39772608
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatc 96  Q
    |||||||||||||||||||||| |  |||||||||||||||||||||||||| ||||||||||||  || ||||||||||||||||||||||||||    
T  39772703 ttttttatgaaagattaataaacgaaactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttcttataaaatcattcttgatatc 39772608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 31347659 - 31347570
Alignment:
Q  19 taaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaacattttcct 108  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||   ||||||||||||||||||| |||||||||    
T  31347659 taaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcct 31347570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 37132582 - 37132477
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctaa 99  Q
    |||||| |||||| |||||||||  ||||||||||||| ||||||||||||| |||||||||| | ||| |||||| ||||||||||||||||||||||     
T  37132582 ttttttttgaaaggttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcatgaatctttcttgataaaatcattcttgatatctag 37132483  T
Q  100 catttt 105  Q
    ||||||    
T  37132482 catttt 37132477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 24844762 - 24844655
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctaa 99  Q
    ||||||||||||| ||||||| |  || | ||||||||  ||||||||| ||||||| ||||||||||| |||||| ||||||||||| |||||||||||    
T  24844762 ttttttatgaaaggttaataattaagattaaaatctaagagtgattattttgccatgccattcttaaatctttcttgataaaatcattattgatatctaa 24844663  T
Q  100 cattttcc 107  Q
    ||||||||    
T  24844662 cattttcc 24844655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 27 - 110
Target Start/End: Complemental strand, 30834931 - 30834847
Alignment:
Q  27 actgaaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctaacattttcctat 110  Q
    |||||||||||| |||| ||||| || |||||||||||| ||| |||||| |||||||||||||||||||||| |||||||||||    
T  30834931 actgaaatctaagggtggttattctgtcatgtcattctttaatctttcttgataaaatcattcttgatatctatcattttcctat 30834847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 41819669 - 41819594
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttctt 76  Q
    |||||||||| || |||||||||| ||||||||||||| ||||||||||||| |||||||||||| ||| ||||||    
T  41819669 ttttttatgataggttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttctt 41819594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 7017757 - 7017652
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||   |||||||| ||||||||||||| | |||||||| |   ||||||||||||||| ||||||   ||||||||||||||||||| |    
T  7017757 ttttttatgaaagg--aataaatgagactgaaatctaaggatgattattataaaatgtcattcttaaatatttcttgataaatcattcttgatatctagc 7017660  T
Q  101 attttcct 108  Q
    ||||||||    
T  7017659 attttcct 7017652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 7022145 - 7022250
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||   |||||||| ||||||||||||| || |||||||||| | |||||||||| ||| ||||||   |||||||| |||||||||| |    
T  7022145 ttttttatgaaagg--aataaatgagactgaaatctaagggcgattattgtgacttgtcattcttgaatctttcttgataaatcattgttgatatctagc 7022242  T
Q  101 attttcct 108  Q
    ||||||||    
T  7022243 attttcct 7022250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 3890486 - 3890412
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctaacattt 104  Q
    |||||||| |||||||||| |||||| |||||||| ||| |||||| |||||||||||||||||||||| |||||    
T  3890486 aaatctaatggtgattattctgccatatcattcttgaatctttcttgataaaatcattcttgatatctagcattt 3890412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 31 - 103
Target Start/End: Original strand, 6108221 - 6108294
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctaacatt 103  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  6108221 aaatctaagggtgattattctgccatgtcattcttaaaattttcttaaaaaaatctttcttgatatataacatt 6108294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 14128941 - 14128876
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| |||||||||||||||||| |||| || |||||||| ||||||||||    
T  14128941 aaatctaagggtgattattctgccatgtcattcttaaaattttattgataaaatctttcttgatat 14128876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 32064822 - 32064757
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||| ||||||||||    
T  32064822 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 32064757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 32393935 - 32393870
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||| ||| |||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  32393935 aaatttaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 32393870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 34665459 - 34665394
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||| ||||||||||    
T  34665459 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 34665394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 35353118 - 35353053
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| | |||||| ||||||||||    
T  35353118 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatat 35353053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 37986043 - 37986108
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattctt-aaatttttcttataaaatcattcttgatat 95  Q
    |||||||| |||||||||| ||||||||||||||| |||||||| | |||||||| ||||||||||    
T  37986043 aaatctaagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatat 37986108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 103
Target Start/End: Original strand, 39772789 - 39772862
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattctt-aaatttttcttataaaatcattcttgatatctaacatt 103  Q
    |||||||| |||||||||| ||||||||||||||| |||||||| | |||||||  |||||||||| |||||||    
T  39772789 aaatctaagggtgattattctgccatgtcattcttgaaatttttttgataaaatatttcttgatatataacatt 39772862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 42755030 - 42755095
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||| ||||||||||    
T  42755030 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 42755095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 31 - 103
Target Start/End: Original strand, 30835035 - 30835107
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaacatt 103  Q
    ||||| || |||||||||| ||||||||||||||| |||||||   |||||||| |||||||||| |||||||    
T  30835035 aaatcaaagggtgattattctgccatgtcattcttgaattttttcgataaaatctttcttgatatataacatt 30835107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 17841838 - 17841903
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| | |||||| ||||||||||    
T  17841838 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 17841903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 20091789 - 20091854
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||  ||||||||||    
T  20091789 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatat 20091854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 76
Target Start/End: Original strand, 25581227 - 25581272
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt 76  Q
    ||||||||||||||||||| ||||||||||||||| || |||||||    
T  25581227 aaatctaaaggtgattattttgccatgtcattcttgaaattttctt 25581272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 76
Target Start/End: Original strand, 31347770 - 31347815
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt 76  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||||    
T  31347770 aaatctaagggtgattattctgccatgtcattcttgaatttttctt 31347815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 40780117 - 40780182
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| | |||||| ||||||||||    
T  40780117 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 40780182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 103
Target Start/End: Original strand, 41819766 - 41819839
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctaacatt 103  Q
    |||||||| |||||||||| |||||| |||||||||||   ||||| |||||||| |||||||||| |||||||    
T  41819766 aaatctaagggtgattattctgccatatcattcttaaaacattcttgataaaatctttcttgatatataacatt 41819839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 95
Target Start/End: Complemental strand, 38017039 - 38016983
Alignment:
Q  40 ggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||||| ||||||||||||||| || ||||||| |||||||| ||||||||||    
T  38017039 ggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 38016983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 76
Target Start/End: Original strand, 3890611 - 3890649
Alignment:
Q  38 aaggtgattattgtgccatgtcattcttaaatttttctt 76  Q
    |||||||||||| ||||||||||||||| ||||||||||    
T  3890611 aaggtgattattctgccatgtcattcttgaatttttctt 3890649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 77
Target Start/End: Original strand, 7017853 - 7017899
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctta 77  Q
    |||||||| | |||||||| ||||||||||||||| |||||||||||    
T  7017853 aaatctaaggatgattattctgccatgtcattcttgaatttttctta 7017899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 24844847 - 24844920
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctaacattt 104  Q
    |||||||| |||||||||| || |||||||||||| |||||||||| |||||||  |||||||||| || |||||    
T  24844847 aaatctaagggtgattatt-tgtcatgtcattcttgaatttttcttaataaaatatttcttgatatgtagcattt 24844920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 76
Target Start/End: Original strand, 37132657 - 37132691
Alignment:
Q  42 tgattattgtgccatgtcattcttaaatttttctt 76  Q
    |||||||| ||||||||||||||||||||||||||    
T  37132657 tgattattctgccatgtcattcttaaatttttctt 37132691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 8453911 - 8453846
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| || |||||||||||| || ||||||| | |||||| ||||||||||    
T  8453911 aaatctaagggtgattattttgtcatgtcattcttgaaattttcttgaaaaaatctttcttgatat 8453846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 26042104 - 26042169
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| || |||||||||||| || ||||||| |||||||| ||||| ||||    
T  26042104 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttaatat 26042169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 27782105 - 27782170
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| |||||||||||| || ||| |||||| |||||||  ||||||||||    
T  27782105 aaatctaagggtgattattctgccatgtcattattgaatctttcttgataaaatatttcttgatat 27782170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 96; Significance: 4e-47; HSPs: 6)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 26100 - 26207
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  26100 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagc 26199  T
Q  101 attttcct 108  Q
    ||||||||    
T  26200 attttcct 26207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 16148 - 16255
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  16148 ttttttatgaaagattaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagc 16247  T
Q  101 attttcct 108  Q
    ||||||||    
T  16248 attttcct 16255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 8479 - 8414
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||| ||||||||||    
T  8479 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 8414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 16061 - 15996
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||| ||||||||||    
T  16061 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 15996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 26013 - 25948
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||| ||||||||||    
T  26013 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 25948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 8566 - 8605
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaag 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  8566 ttttttatgaaagattaataaatgagactgaaatctaaag 8605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 96; Significance: 4e-47; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 33696861 - 33696968
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |    
T  33696861 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatctttcttataaaatcattcttgatatctagc 33696960  T
Q  101 attttcct 108  Q
    ||||||||    
T  33696961 attttcct 33696968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 32702369 - 32702476
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |    
T  32702369 ttttttatgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagc 32702468  T
Q  101 attttcct 108  Q
    ||||||||    
T  32702469 attttcct 32702476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 17175922 - 17175816
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||| |    
T  17175922 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttataaaatcattcttgatatctagc 17175823  T
Q  101 attttcc 107  Q
    |||||||    
T  17175822 attttcc 17175816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 33695227 - 33695121
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||| |    
T  33695227 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatatcattcttaaatatttcttataaaatcattcttgatatctagc 33695128  T
Q  101 attttcc 107  Q
    |||||||    
T  33695127 attttcc 33695121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 18365475 - 18365369
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||  || |||||||||||||||||||||||||||| |    
T  18365475 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttcttataaaatcattcttgatatctagc 18365376  T
Q  101 attttcc 107  Q
    |||||||    
T  18365375 attttcc 18365369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 18370739 - 18370633
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||  || |||||||||||||||||||||||||||| |    
T  18370739 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttcttataaaatcattcttgatatctagc 18370640  T
Q  101 attttcc 107  Q
    |||||||    
T  18370639 attttcc 18370633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 6031641 - 6031546
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatc 96  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  6031641 ttttttataaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatcttttttataaaatcattcttgatatc 6031546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 23290982 - 23290875
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||| ||| ||||||||||||||||| |||||||||| |    
T  23290982 ttttttatgaaagattaataaatgagactgaaatctaaaggtaattattgtgccatatcattcttgaatctttcttataaaatcatttttgatatctagc 23290883  T
Q  101 attttcct 108  Q
    ||||||||    
T  23290882 attttcct 23290875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 2309324 - 2309209
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    ||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||  |||||||||| |    
T  2309324 ttttttatgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcatcgttgatatctagc 2309225  T
Q  101 attttcctataatttaa 117  Q
    ||||||| |||||||||    
T  2309224 attttcc-ataatttaa 2309209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 28675315 - 28675419
Alignment:
Q  4 tttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaacatt 103  Q
    |||||||||| |||||||||| ||||||||||||| ||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||| ||||    
T  28675315 tttatgaaaggttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcatt 28675414  T
Q  104 ttcct 108  Q
    |||||    
T  28675415 ttcct 28675419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 17705369 - 17705263
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    ||||||||||||| |||||||||| ||||||||||||| ||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||| |    
T  17705369 ttttttatgaaaggttaataaatgagactgaaatctaa-ggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagc 17705271  T
Q  101 attttcct 108  Q
    ||||||||    
T  17705270 attttcct 17705263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 29693609 - 29693717
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctaa 99  Q
    |||||||||||||  ||||||||  ||||||||||||| ||| |||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||     
T  29693609 ttttttatgaaaggataataaataagactgaaatctaagggtcattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctag 29693708  T
Q  100 cattttcct 108  Q
    |||||||||    
T  29693709 cattttcct 29693717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 18889545 - 18889481
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattctt 65  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  18889545 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattctt 18889481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 11548488 - 11548386
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||   |||||||| ||||||||||||| |||||||||||||||||||||||||| |||  |||||   ||||||||||||||||||| |    
T  11548488 ttttttatgaaagg--aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatcgttcttgataaatcattcttgatatctagc 11548391  T
Q  101 atttt 105  Q
    |||||    
T  11548390 atttt 11548386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 107
Target Start/End: Complemental strand, 582602 - 582522
Alignment:
Q  29 tgaaatctaaaggtgattattgtgcc-atgtcattcttaaatttttctta-taaaatcattcttgatatctaacattttcc 107  Q
    |||||||||| |||||||||| |||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  582602 tgaaatctaatggtgattattctgcccatatcattcttaaatttttcttaataaaatcattcttgatatctaacattttcc 582522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 6127441 - 6127505
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattctt 65  Q
    |||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  6127441 ttttatatgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattctt 6127505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 6127352 - 6127287
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  6127352 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 6127287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 23291072 - 23291137
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  23291072 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 23291137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 17705453 - 17705518
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| || ||||||||||||||| ||||||| |||||||| ||||||||||    
T  17705453 aaatctaagggtgattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatat 17705518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 33695315 - 33695380
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||| ||||||||||    
T  33695315 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 33695380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 33696773 - 33696708
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||| ||||||||||    
T  33696773 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 33696708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 106
Target Start/End: Complemental strand, 34238948 - 34238883
Alignment:
Q  41 gtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaacattttc 106  Q
    |||||||||||| |||||||||||| ||| ||  | |||||||||||||||||||||| |||||||    
T  34238948 gtgattattgtgtcatgtcattcttgaatcttcttgataaaatcattcttgatatctagcattttc 34238883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 107
Target Start/End: Complemental strand, 2121059 - 2121004
Alignment:
Q  53 ccatgtcattcttaaat-ttttcttataaaatcattcttgatatctaacattttcc 107  Q
    ||||||||||||| ||| |||| ||||||||||||| |||||||||||||||||||    
T  2121059 ccatgtcattcttgaatctttttttataaaatcatttttgatatctaacattttcc 2121004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 76
Target Start/End: Original strand, 11548576 - 11548621
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt 76  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||||    
T  11548576 aaatctaagggtgattattctgccatgtcattcttgaatttttctt 11548621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 18365561 - 18365626
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattctt-aaatttttcttataaaatcattcttgatat 95  Q
    |||| ||| |||||||||| ||||||||||||||| |||||||| | |||||||| ||||||||||    
T  18365561 aaatttaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatat 18365626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 18370825 - 18370890
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattctt-aaatttttcttataaaatcattcttgatat 95  Q
    |||| ||| |||||||||| ||||||||||||||| |||||||| | |||||||| ||||||||||    
T  18370825 aaatttaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatat 18370890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 8515628 - 8515560
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaat 69  Q
    ||||||||||||  |||||||||  |||||||||||||  ||||||||| | |||||||||| ||||||    
T  8515628 ttttttatgaaatgttaataaataagactgaaatctaagagtgattattctaccatgtcatttttaaat 8515560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 41 - 95
Target Start/End: Original strand, 8515723 - 8515778
Alignment:
Q  41 gtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    ||||||||| ||||||||||||||||||| | |||| |||||||| ||||||||||    
T  8515723 gtgattattctgccatgtcattcttaaatctgtcttgataaaatctttcttgatat 8515778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 41 - 95
Target Start/End: Complemental strand, 25986997 - 25986942
Alignment:
Q  41 gtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    ||||||||| ||||||||||||||| || ||||||| |||||||| ||||||||||    
T  25986997 gtgattattttgccatgtcattcttgaaattttcttaataaaatctttcttgatat 25986942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 9752147 - 9752109
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaa 39  Q
    ||||||||||||| |||||||||| ||||||||||||||    
T  9752147 ttttttatgaaaggttaataaatgagactgaaatctaaa 9752109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 17176009 - 17176074
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattctt-aaatttttcttataaaatcattcttgatat 95  Q
    |||||||| |||||||||| || |||||||||||| |||||||  | |||||||| ||||||||||    
T  17176009 aaatctaagggtgattattctgtcatgtcattcttgaaattttattgataaaatctttcttgatat 17176074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 28675225 - 28675160
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| ||||||||||  | |||||||||||| || ||||||| |||||||| ||||||||||    
T  28675225 aaatctaagggtgattattccgacatgtcattcttgaaattttcttgataaaatctttcttgatat 28675160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 18889685 - 18889749
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatat 95  Q
    |||||||| ||| |||||| ||||||||||||||| || |||||||   ||||| ||||||||||    
T  18889685 aaatctaagggttattattctgccatgtcattcttgaaattttcttgataaatctttcttgatat 18889749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 96; Significance: 4e-47; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 34482789 - 34482682
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  34482789 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagc 34482690  T
Q  101 attttcct 108  Q
    ||||||||    
T  34482689 attttcct 34482682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 37522217 - 37522323
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |    
T  37522217 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattatgccatgtcattcttaaatttttcttataaaatcattcttgatatctagc 37522316  T
Q  101 attttcc 107  Q
    |||||||    
T  37522317 attttcc 37522323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 3137315 - 3137208
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  3137315 ttttgtatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagc 3137216  T
Q  101 attttcct 108  Q
    ||||||||    
T  3137215 attttcct 3137208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 3089583 - 3089689
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| |    
T  3089583 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttagatctttcttataaaatcattcttgatatctagc 3089682  T
Q  101 attttcc 107  Q
    |||||||    
T  3089683 attttcc 3089689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 22426246 - 22426139
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |    
T  22426246 ttttttatgaaagattaataaatgagactgaaatctaaatgtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagc 22426147  T
Q  101 attttcct 108  Q
    ||||||||    
T  22426146 attttcct 22426139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 33113958 - 33114065
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |    
T  33113958 ttttttatgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagc 33114057  T
Q  101 attttcct 108  Q
    ||||||||    
T  33114058 attttcct 33114065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 37216954 - 37216847
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||| |    
T  37216954 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttataaaatcattcttgatatctagc 37216855  T
Q  101 attttcct 108  Q
    ||||||||    
T  37216854 attttcct 37216847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 2754883 - 2754989
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |    
T  2754883 ttttttatgaaagattaataaatgagactgaaatttaaaggtgattattgtgccatgtcattcttaaatctttcttataaaatgattcttgatatctagc 2754982  T
Q  101 attttcc 107  Q
    |||||||    
T  2754983 attttcc 2754989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 8320483 - 8320378
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||| |    
T  8320483 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattattgatatctagc 8320384  T
Q  101 attttc 106  Q
    ||||||    
T  8320383 attttc 8320378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 30385565 - 30385670
Alignment:
Q  2 tttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaaca 101  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| || ||    
T  30385565 tttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatttagca 30385664  T
Q  102 ttttcc 107  Q
    ||||||    
T  30385665 ttttcc 30385670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 6042041 - 6042148
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||| |    
T  6042041 ttttttatgaaaaattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagc 6042140  T
Q  101 attttcct 108  Q
    ||||||||    
T  6042141 attttcct 6042148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 19650801 - 19650695
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||  || |||||||||||||||||||||||||||| |    
T  19650801 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttcttataaaatcattcttgatatctagc 19650702  T
Q  101 attttcc 107  Q
    |||||||    
T  19650701 attttcc 19650695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 3456228 - 3456335
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| |||| |||||||||||| ||| |||||||||||||||||||||||||||| |    
T  3456228 ttttttatgaaagattaataaatgagactgaaatctaaagatgattagtgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagc 3456327  T
Q  101 attttcct 108  Q
    ||||||||    
T  3456328 attttcct 3456335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 3574427 - 3574321
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||  || |||||||||||||||||||||||||||| |    
T  3574427 ttttttatgaaagattaataaatgagactgaaatctagaggtgattattgtgtcatgtcattcttggatctttcttataaaatcattcttgatatctagc 3574328  T
Q  101 attttcc 107  Q
    |||||||    
T  3574327 attttcc 3574321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 47738275 - 47738382
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctaa 99  Q
    ||||||||||||| |||||||||| ||||||||||||| | |||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||    
T  47738275 ttttttatgaaaggttaataaatgagactgaaatctaaggatgattattgtgccatgtcattcttgaatctttcttgataaaatcattcttgatatctaa 47738374  T
Q  100 cattttcc 107  Q
    ||||||||    
T  47738375 cattttcc 47738382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 48161070 - 48161177
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||| |||||  || |||||||||||||||||||||||||||| |    
T  48161070 ttttttatgaaaaattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcgttcttggatatttcttataaaatcattcttgatatctagc 48161169  T
Q  101 attttcct 108  Q
    ||||||||    
T  48161170 attttcct 48161177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 33145876 - 33145980
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    ||||||||||||| |||||||||  ||||||||||||| ||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||| |    
T  33145876 ttttttatgaaaggttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagc 33145975  T
Q  101 atttt 105  Q
    |||||    
T  33145976 atttt 33145980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 26612910 - 26613017
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctaa 99  Q
    ||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||| |||||| ||| |||||| ||||||||||| |||||||||||    
T  26612910 ttttttatgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgttattcttgaatctttcttaataaaatcattattgatatctaa 26613009  T
Q  100 cattttcc 107  Q
    ||||||||    
T  26613010 cattttcc 26613017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 42921289 - 42921394
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctaa 99  Q
    ||||||||||||| |||||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| |||||| |||||||||||||| |||||||     
T  42921289 ttttttatgaaaggttaataaatgagactgaaatttaagggtgattgttgtgccatgtcattcttaaatatttcttgataaaatcattcttaatatctag 42921388  T
Q  100 catttt 105  Q
    ||||||    
T  42921389 catttt 42921394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 36864934 - 36864826
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaat-ttttcttataaaatcattcttgatatctaa 99  Q
    |||| |||||||  |||||||||| ||||||||||||| ||||||||||||| |||||||||||| ||| |||| | ||||||||||||||||||||||     
T  36864934 ttttatatgaaatgttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatcttttttgataaaatcattcttgatatctag 36864835  T
Q  100 cattttcct 108  Q
    |||||||||    
T  36864834 cattttcct 36864826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 33839699 - 33839794
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    ||||||||||||| |||||||||| ||||||||| ||| ||||||||||||| |||||||||||| ||| |||||| |||||||||||||||||||    
T  33839699 ttttttatgaaaggttaataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatat 33839794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 40327996 - 40328103
Alignment:
Q  2 tttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctaac 100  Q
    ||||||| |||| | |||||||  ||||||||||||| ||||||||||||| |||||||||||| ||| |||||| |||||||||||||||||||||| |    
T  40327996 tttttatcaaaggtaaataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagc 40328095  T
Q  101 attttcct 108  Q
    ||||||||    
T  40328096 attttcct 40328103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 41224400 - 41224507
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    ||||||||||||||  |||||||| || |||||| ||| |||||||||||||||||||||||||| ||| ||||||   ||||||||||||||||||| |    
T  41224400 ttttttatgaaaga--aataaatgagattgaaatttaagggtgattattgtgccatgtcattcttgaatatttcttgataaatcattcttgatatctagc 41224497  T
Q  101 attttcctat 110  Q
    ||||||||||    
T  41224498 attttcctat 41224507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 8361938 - 8361833
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    ||||||||||||  | |||||||| ||||||||||||| ||||||||||||| |||||||||||| ||| ||||||   ||||||||||||||||||| |    
T  8361938 ttttttatgaaa--tgaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagc 8361841  T
Q  101 attttcct 108  Q
    ||||||||    
T  8361840 attttcct 8361833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 46919061 - 46919164
Alignment:
Q  4 tttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaat-ttttcttataaaatcattcttgatatctaacat 102  Q
    ||||||| ||||||||||||  ||| |||||||| ||||||||||| |||||||||||| || ||| |||| | ||||||||||||||||||||||||||    
T  46919061 tttatgatagattaataaataagaccgaaatctagaggtgattattctgccatgtcattattgaatcttttttgataaaatcattcttgatatctaacat 46919160  T
Q  103 tttc 106  Q
    ||||    
T  46919161 tttc 46919164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 9796928 - 9796819
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||   |||||||| |||||||||||||  |||||||||||| |||||||||||| ||| ||||||   ||||||||||||||||||| |    
T  9796928 ttttttatgaaagg--aataaatgagactgaaatctaagagtgattattgtgacatgtcattcttgaatctttcttgataaatcattcttgatatctagc 9796831  T
Q  101 attttcctataa 112  Q
    ||||||| ||||    
T  9796830 attttcccataa 9796819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 24343713 - 24343820
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctaa 99  Q
    |||||| |||||| |||||||||  ||||||||||||| |||||||||  |  |||||||||||| ||| ||| || |||||||||||||||||||||||    
T  24343713 ttttttttgaaaggttaataaataagactgaaatctaagggtgattatcatatcatgtcattcttgaatcttttttgataaaatcattcttgatatctaa 24343812  T
Q  100 cattttcc 107  Q
    ||||||||    
T  24343813 cattttcc 24343820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 2754794 - 2754729
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  2754794 aaatctaaaggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 2754729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 42298026 - 42298090
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattctt 65  Q
    ||||||||||||| |||||||||| ||||||||||||| |||| |||||||| ||||||||||||    
T  42298026 ttttttatgaaaggttaataaatgagactgaaatctaagggtggttattgtgtcatgtcattctt 42298090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 3574515 - 3574580
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  3574515 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 3574580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 31 - 103
Target Start/End: Original strand, 9797017 - 9797090
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctaacatt 103  Q
    |||||||| |||||||||| ||||||||||||||| |||||||||| | |||||| |||||||||| |||||||    
T  9797017 aaatctaatggtgattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatatataacatt 9797090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 31 - 103
Target Start/End: Original strand, 19650888 - 19650961
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctaacatt 103  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| ||||| |||| |||||||    
T  19650888 aaatctaatggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttaatatataacatt 19650961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 33145789 - 33145725
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatat 95  Q
    |||||||| |||||||||| |||||||||||||||||| |||| | |||||||| ||||||||||    
T  33145789 aaatctaagggtgattattctgccatgtcattcttaaaattttttaataaaatctttcttgatat 33145725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 3456141 - 3456076
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| |||||| ||||||||||| ||||||| |||||||| ||||||||||    
T  3456141 aaatctaagggtgattattctgccatatcattcttaaaattttcttgataaaatctttcttgatat 3456076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 103
Target Start/End: Original strand, 8320572 - 8320645
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctaacatt 103  Q
    |||| ||| |||||||||| |||||| ||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  8320572 aaatttaagggtgattattttgccatatcattcttaaaattttcttgataaaatctttcttgatatataacatt 8320645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 11347345 - 11347280
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| ||| |||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  11347345 aaatctaagggttattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 11347280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 103
Target Start/End: Original strand, 22426332 - 22426405
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctaacatt 103  Q
    |||||||| |||||||||| |||||||||||| ||||| ||||||| |||||||| ||||| |||| |||||||    
T  22426332 aaatctaagggtgattattctgccatgtcatttttaaaattttcttgataaaatctttcttaatatataacatt 22426405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 37217041 - 37217106
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||| ||| |||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  37217041 aaatttaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 37217106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 48160982 - 48160917
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| |||||| ||||||||||| ||||||| |||||||| ||||||||||    
T  48160982 aaatctaagggtgattattctgccatatcattcttaaaattttcttgataaaatctttcttgatat 48160917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 41883123 - 41883031
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttga 92  Q
    |||||||| |||| || ||||||  |||||||||| |||| |||||||| | ||||||||||||| ||| |||||| ||||||||||| ||||    
T  41883123 ttttttataaaaggttgataaataagactgaaatccaaagatgattattttaccatgtcattcttgaatctttcttcataaaatcatttttga 41883031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 3137402 - 3137467
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| | |||||| ||||||||||    
T  3137402 aaatctaagggtgattattttgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 3137467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 6041961 - 6041896
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| || |||||||||||| || ||||||| |||||||| ||||||||||    
T  6041961 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 6041896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 76
Target Start/End: Original strand, 8362033 - 8362078
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt 76  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||||    
T  8362033 aaatctaagggtgattattctgccatgtcattcttgaatttttctt 8362078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 103
Target Start/End: Complemental strand, 33839608 - 33839535
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctaacatt 103  Q
    |||||||| |||||||||| || ||||| |||||||||||||| || |||||||| ||||| |||| |||||||    
T  33839608 aaatctaatggtgattattctgtcatgttattcttaaattttttttgataaaatctttcttaatatataacatt 33839535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 47738182 - 47738117
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||||||| |||||| |||||| |||||||| ||| |||||| |||||||| ||||||||||    
T  47738182 aaatctaaaggtaattattctgccatatcattcttgaatatttcttgataaaatctttcttgatat 47738117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 11347433 - 11347476
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtga 44  Q
    |||||||||||| ||||||||||| || ||||||||||||||||    
T  11347433 ttttttatgaaaaattaataaatgagattgaaatctaaaggtga 11347476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 42297431 - 42297365
Alignment:
Q  31 aaatctaaaggtgattattgt-gccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| | | ||||||||||||||| ||||||| |||||||| ||||||||||    
T  42297431 aaatctaagggtgattattctagtcatgtcattcttaaaattttcttgataaaatctttcttgatat 42297365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 68
Target Start/End: Complemental strand, 3089494 - 3089457
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaa 68  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  3089494 aaatctaagggtgattattctgccatgtcattcttaaa 3089457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 37522130 - 37522065
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||| | |||||||||| || ||||||||||||||| ||||||| | |||||| ||||||||||    
T  37522130 aaatcttagggtgattattctgtcatgtcattcttaaaattttcttgaaaaaatctttcttgatat 37522065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 76
Target Start/End: Original strand, 41883211 - 41883256
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt 76  Q
    |||| ||| |||||||||| ||||||||||||||| ||||||||||    
T  41883211 aaatttaagggtgattattctgccatgtcattcttgaatttttctt 41883256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 94
Target Start/End: Complemental strand, 30385088 - 30385024
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgata 94  Q
    |||| ||| |||||||||| |||||||||||| || || ||||||| |||||||| |||||||||    
T  30385088 aaatataagggtgattattctgccatgtcatttttgaaattttcttgataaaatctttcttgata 30385024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 4e-47; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 51737669 - 51737776
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  51737669 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagc 51737768  T
Q  101 attttcct 108  Q
    ||||||||    
T  51737769 attttcct 51737776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 36966609 - 36966502
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |    
T  36966609 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgttattcttgaatttttcttataaaatcattcttgatatctagc 36966510  T
Q  101 attttcct 108  Q
    ||||||||    
T  36966509 attttcct 36966502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 41876343 - 41876236
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |    
T  41876343 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttgaatttttcttataaaatcattcttgatatctagc 41876244  T
Q  101 attttcct 108  Q
    ||||||||    
T  41876243 attttcct 41876236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 9910192 - 9910086
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  9910192 ttttttatgaaagattaataaataagtctgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctaac 9910093  T
Q  101 attttcc 107  Q
    |||||||    
T  9910092 attttcc 9910086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 37821735 - 37821629
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |    
T  37821735 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagc 37821636  T
Q  101 attttcc 107  Q
    |||||||    
T  37821635 attttcc 37821629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 3 - 108
Target Start/End: Original strand, 18404614 - 18404719
Alignment:
Q  3 ttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaacat 102  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||    
T  18404614 ttttatgaaagattaataaatgagactgaaatctaaatgtgattattgtgccatgtcattcttaaatctttcttataaaatcattcttgatatctagcat 18404713  T
Q  103 tttcct 108  Q
    ||||||    
T  18404714 tttcct 18404719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 19015568 - 19015676
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |    
T  19015568 ttttgtatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatgtagc 19015667  T
Q  101 attttccta 109  Q
    |||||||||    
T  19015668 attttccta 19015676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 20305031 - 20304924
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |    
T  20305031 ttttttatgaaagattgataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagc 20304932  T
Q  101 attttcct 108  Q
    ||||||||    
T  20304931 attttcct 20304924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 25973571 - 25973693
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |    
T  25973571 ttttttatgaaagattaataaatgagactgaaatttaaaggtgattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagc 25973670  T
Q  101 attttcctataatttaaaacataa 124  Q
    ||||||| ||||| ||| ||||||    
T  25973671 attttcc-ataatataatacataa 25973693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 6883651 - 6883757
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  6883651 ttttttatgaaagattaataaatgagactgaaatctaaaggtgaatattatgccatgtcattcttgaatttttcttataaaatcattcttgatatctagc 6883750  T
Q  101 attttcc 107  Q
    |||||||    
T  6883751 attttcc 6883757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 40215152 - 40215257
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |    
T  40215152 ttttttatgaaatattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagc 40215251  T
Q  101 attttc 106  Q
    ||||||    
T  40215252 attttc 40215257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 25463840 - 25463946
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||| |    
T  25463840 ttttttatgaaagattaataaatgagacttaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagc 25463939  T
Q  101 attttcc 107  Q
    |||||||    
T  25463940 attttcc 25463946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 44094864 - 44094968
Alignment:
Q  4 tttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaacatt 103  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||  || ||||||||||||| |||||||||||||| ||||    
T  44094864 tttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttcttataaaataattcttgatatctagcatt 44094963  T
Q  104 ttcct 108  Q
    |||||    
T  44094964 ttcct 44094968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 3559781 - 3559887
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||| ||||||||  || |||||||||||||||||||||||||||| |    
T  3559781 ttttttatgaaagattaataaatgagactgaaatataaaggtgattattgtgtcatatcattcttggatctttcttataaaatcattcttgatatctagc 3559880  T
Q  101 attttcc 107  Q
    |||||||    
T  3559881 attttcc 3559887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 31 - 107
Target Start/End: Complemental strand, 19722970 - 19722894
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaacattttcc 107  Q
    |||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  19722970 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 19722894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 10167563 - 10167677
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaat-ttttcttataaaatcattcttgatatctaa 99  Q
    |||||||||||| ||||||||||  ||||||||||||||||||||||||||  ||| | |||||||||| |||| |||||||||||||||| |||| |||    
T  10167563 ttttttatgaaaaattaataaataagactgaaatctaaaggtgattattgtatcatattattcttaaatatttttttataaaatcattcttaatatgtaa 10167662  T
Q  100 cattttcctataatt 114  Q
    ||||||||| |||||    
T  10167663 cattttcctttaatt 10167677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 44690923 - 44690818
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctaa 99  Q
    |||||||| ||||||||||||||  ||||| ||||||| |||||||||| ||||||||||||||| ||| |||||| ||||||||||| |||||||||||    
T  44690923 ttttttataaaagattaataaataagactggaatctaagggtgattattctgccatgtcattcttgaatctttcttgataaaatcattattgatatctaa 44690824  T
Q  100 catttt 105  Q
    ||||||    
T  44690823 catttt 44690818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 33786530 - 33786425
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||   |||||||| ||||||||||||| |||||||||||||||||||||||||| ||| ||||||   ||||||||||||||||||| |    
T  33786530 ttttttatgaaagg--aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagc 33786433  T
Q  101 attttcct 108  Q
    ||||||||    
T  33786432 attttcct 33786425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 32000165 - 32000061
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    ||||||||||||  | |||||||| ||||||||||||| |||||||||||||||||||||||||| ||| ||||||   ||||||||||||||||||| |    
T  32000165 ttttttatgaaa--tgaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagc 32000068  T
Q  101 attttcc 107  Q
    |||||||    
T  32000067 attttcc 32000061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 40273874 - 40273976
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||   |||||||| ||||||||||||| |||||||||||||||||||||||||| ||| ||||||   ||||||||||||||||||| |    
T  40273874 ttttttatgaaagg--aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatatttcttgataaatcattcttgatatctagc 40273971  T
Q  101 atttt 105  Q
    |||||    
T  40273972 atttt 40273976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 18404519 - 18404454
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    ||||||||||||||||||| | |||||||||||||||| ||||||| |||||||| ||||||||||    
T  18404519 aaatctaaaggtgattattctaccatgtcattcttaaaattttcttgataaaatctttcttgatat 18404454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 25463753 - 25463688
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  25463753 aaatctaagggtgattattctgccatgtcattcttaaaattttcttcataaaatctttcttgatat 25463688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 33786623 - 33786696
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaacattt 104  Q
    |||| ||| |||||||||||||||||||||||||| ||| ||||||   ||||||||||||||||||| |||||    
T  33786623 aaatttaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattt 33786696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 27523157 - 27523049
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctaa 99  Q
    ||||||||||||  |||||||||  |||| ||||| || |||||||| | ||||||   |||||| ||| |||||| ||||||||||||||||||| |||    
T  27523157 ttttttatgaaaagttaataaataagactaaaatcaaagggtgattaatctgccatacgattcttgaatctttcttgataaaatcattcttgatatataa 27523058  T
Q  100 cattttcct 108  Q
    |||||||||    
T  27523057 cattttcct 27523049  T

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Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 16045786 - 16045851
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||| ||||||||||    
T  16045786 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 16045851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 40215065 - 40215000
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||| ||||||||||    
T  40215065 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 40215000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 103
Target Start/End: Complemental strand, 40273779 - 40273706
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctaacatt 103  Q
    |||||||| |||||||||| || |||||||||||| |||||||||| | |||||| ||||||||||||| ||||    
T  40273779 aaatctaagggtgattattttgacatgtcattcttgaatttttcttgaaaaaatctttcttgatatctagcatt 40273706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 3559694 - 3559629
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattctt-aaatttttcttataaaatcattcttgatat 95  Q
    |||| ||| |||||||||| ||||||||||||||| |||||||| | |||||||| ||||||||||    
T  3559694 aaatttaagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatat 3559629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 44094775 - 44094710
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||  ||||||||||    
T  44094775 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatat 44094710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 106
Target Start/End: Complemental strand, 52064445 - 52064373
Alignment:
Q  35 ctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctaacattttc 106  Q
    |||| ||||| |||| || |||||||||||| ||| |||||| ||||||||||| |||||||||| |||||||    
T  52064445 ctaagggtgaatattctgtcatgtcattcttgaatctttcttgataaaatcatttttgatatctagcattttc 52064373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 52329439 - 52329503
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattctt 65  Q
    ||||||||||||  ||||||| |  ||||||||||||| |||||||||| ||| |||||||||||    
T  52329439 ttttttatgaaacgttaataattaagactgaaatctaagggtgattattctgctatgtcattctt 52329503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 6883564 - 6883513
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaa 82  Q
    |||||||| |||||||||| ||||||||||||||| || |||||||| ||||    
T  6883564 aaatctaagggtgattattctgccatgtcattcttgaaattttcttaaaaaa 6883513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 93
Target Start/End: Original strand, 27523243 - 27523306
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgat 93  Q
    |||| ||| |||||||||| || ||||||||||||||||||||||| |||||||  ||||||||    
T  27523243 aaatttaagggtgattattctgtcatgtcattcttaaatttttcttgataaaattgttcttgat 27523306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 9910281 - 9910346
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| | |||||||| ||||||||||||||| || ||||||| | |||||| ||||||||||    
T  9910281 aaatctaaggttgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 9910346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 32000255 - 32000320
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||| ||||| || |||||||||||| |||||||||| | |||||| ||||||||||    
T  32000255 aaatctaagggtggttattctgtcatgtcattcttgaatttttcttgagaaaatctttcttgatat 32000320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 95
Target Start/End: Original strand, 41876434 - 41876495
Alignment:
Q  35 ctaaaggtgattattgtgccatgtcattctt-aaatttttcttataaaatcattcttgatat 95  Q
    |||| |||||||||| ||||||||||||||| |||||||| | | |||||| ||||||||||    
T  41876434 ctaagggtgattattctgccatgtcattcttaaaatttttttgaaaaaatctttcttgatat 41876495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 107
Target Start/End: Complemental strand, 22157437 - 22157333
Alignment:
Q  3 ttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaacat 102  Q
    ||||||||||  |||||||||  || |||||| |||  ||||||||| | |||||||||||||||||   || ||  || ||||| |||||||||| |||    
T  22157437 ttttatgaaatgttaataaataagattgaaatttaagtgtgattattctcccatgtcattcttaaatccatcataagaattcatttttgatatctagcat 22157338  T
Q  103 tttcc 107  Q
    |||||    
T  22157337 tttcc 22157333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 4560 - 4666
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |    
T  4560 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatatcattcttaaatttttcttataaaatcattcttgatatctagc 4659  T
Q  101 attttcc 107  Q
    |||||||    
T  4660 attttcc 4666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 4473 - 4408
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| | |||||| ||||||||||    
T  4473 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatat 4408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 89; Significance: 6e-43; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 13006 - 13110
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |    
T  13006 ttttttatgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagc 13105  T
Q  101 atttt 105  Q
    |||||    
T  13106 atttt 13110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 12919 - 12854
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| | |||||||| ||||||||||||||| || ||||||| | |||||| ||||||||||    
T  12919 aaatctaaggatgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 12854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 82; Significance: 9e-39; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 48014 - 48119
Alignment:
Q  2 tttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaaca 101  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||| ||    
T  48014 tttttatgaaagattaataaatgagactgaaatctaaagatgattattgtgctatgtcattcttgaatctttcttataaaatcattcttgatatctagca 48113  T
Q  102 ttttcc 107  Q
    ||||||    
T  48114 ttttcc 48119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 31 - 94
Target Start/End: Complemental strand, 47927 - 47863
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgata 94  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||| |||||||||    
T  47927 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgata 47863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 79; Significance: 6e-37; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 41174 - 41280
Alignment:
Q  1 ttttttatgaaagattaataaatgtgactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaac 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||  || |||||||||||||||||||||||||||| |    
T  41174 ttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatatcattcttggatctttcttataaaatcattcttgatatctagc 41273  T
Q  101 attttcc 107  Q
    |||||||    
T  41274 attttcc 41280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 41088 - 41023
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattctt-aaatttttcttataaaatcattcttgatat 95  Q
    |||||||| |||||||||| ||||||||||||||| |||||||| | |||||||| ||||||||||    
T  41088 aaatctaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatat 41023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 3145 - 3080
Alignment:
Q  31 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 95  Q
    |||||||| |||||||||| |||||||||||||||||| |||| || |||||||| ||||||||||    
T  3145 aaatctaagggtgattattctgccatgtcattcttaaaattttattgataaaatctttcttgatat 3080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 85577 - 85642
Alignment:
Q  41 gtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaacattttcc 107  Q
    |||||||||||||||||| ||| || ||| ||||  || ||||||||||||||||||| ||||||||    
T  85577 gtgattattgtgccatgttattttttaatctttca-atcaaatcattcttgatatctagcattttcc 85642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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